>ITA5_HUMAN (P08648) Integrin alpha-5 precursor (Fibronectin receptor alpha|
           subunit) (Integrin alpha-F) (VLA-5) (CD49e antigen)
           [Contains: Integrin alpha-5 heavy chain; Integrin
           alpha-5 light chain]
          Length = 1049

 Score = 33.1 bits (74), Expect = 0.33
 Identities = 22/64 (34%), Positives = 27/64 (42%)
 Frame = -1

Query: 236 RESCLAPLGILYLPTCVGFGYRYPFVEGRSSFSWEYGIGYILQRRSAWYEPRGEAIASPR 57
           +E    P+G  YL T   F     +   RS FSW  G GY     SA +   G  +    
Sbjct: 166 KEPLSDPVGTCYLSTD-NFTRILEYAPCRSDFSWAAGQGYCQGGFSAEFTKTGRVVLGGP 224

Query: 56  GSYF 45
           GSYF
Sbjct: 225 GSYF 228

>PRGR_MOUSE (Q00175) Progesterone receptor (PR)|
          Length = 923

 Score = 29.3 bits (64), Expect = 4.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = +3

Query: 357 PGPSRRPACWRCWWPTRSLPAMPATAAS 440
           P P + PA   C  P  SLPA P TAA+
Sbjct: 471 PLPCKPPAAASCLLPRDSLPAAPGTAAA 498

>EGR1_COTJA (O73692) Early growth response protein 1 (EGR-1) (Zinc finger|
           protein ZENK) (Fragment)
          Length = 194

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 20/64 (31%), Positives = 27/64 (42%)
 Frame = -2

Query: 277 PFSRSYGAILPSSLERVVSRP*VFSTYPPVSVSGTGTLLLKVVRAFPGSMASVTYFSAVA 98
           P S SY    PS        P + +TYP    SGT T   +V  +FP    +  + S V 
Sbjct: 125 PASSSY----PSPAHTAFPSPSIATTYP----SGTATFQTQVATSFPSPAVTNNFSSQVT 176

Query: 97  PGMS 86
             +S
Sbjct: 177 SALS 180

>ESC2_YEAST (Q06340) Protein ESC2 (Establishes silent chromatin protein 2)|
          Length = 456

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 19/49 (38%), Positives = 26/49 (53%)
 Frame = +2

Query: 224 DNSL*GTRQNSPVTSGEGVPPTKPSYLTLTTTSASQLKQPGAMASRTFS 370
           D+S    RQ+  V S   VPP+K S LTL+ +  S  K+     SR+ S
Sbjct: 42  DHSDESNRQSVIVDSKVTVPPSKHSTLTLSDSEDSDAKEQHQSLSRSSS 90

>XYNB_PSEFL (P23030) Endo-1,4-beta-xylanase B precursor (EC 3.2.1.8) (Xylanase|
           B) (1,4-beta-D-xylan xylanohydrolase B)
          Length = 592

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = +2

Query: 314 TTSASQLKQPGAMASRTFSAACLLALLVANTFLAGDAC 427
           T SAS  + PG    RT +  C+   L A  F A  AC
Sbjct: 2   TISASDYRHPGNFLKRTTALLCVGTALTALAFNASAAC 39

>S4A7_RAT (Q9R1N3) Sodium bicarbonate cotransporter 3 (Electroneutral sodium|
           bicarbonate cotransporter 1) (NBC-like protein) (Solute
           carrier family 4 member 7)
          Length = 1218

 Score = 28.5 bits (62), Expect = 8.1
 Identities = 16/37 (43%), Positives = 22/37 (59%)
 Frame = +2

Query: 239 GTRQNSPVTSGEGVPPTKPSYLTLTTTSASQLKQPGA 349
           G+R  +PV + +  PP+ PS   LT+ S SQ  QP A
Sbjct: 301 GSRCTTPVPTPQNSPPSSPSLSRLTSRS-SQQTQPQA 336


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,496,395
Number of Sequences: 219361
Number of extensions: 1329611
Number of successful extensions: 3633
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3502
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3628
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 2735358828
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)