ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet91g02 |
|---|---|
| Clone Library Name | barley_pub |
>CB4B_ARATH (Q9XF88) Chlorophyll a-b binding protein CP29.2, chloroplast| precursor (LHCII protein 4.2) (LHCB4.2) Length = 287 Score = 111 bits (278), Expect = 4e-25 Identities = 52/82 (63%), Positives = 62/82 (75%) Frame = +2 Query: 119 LADPAPQNGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPGAQAPEYLDGTLVGDYGFDP 298 ++D + + R ARFGFG + DRPLWFPGA++PEYLDG+LVGDYGFDP Sbjct: 19 VSDISSNSSRFTARFGFGTKKASPKKAKTVIS-DRPLWFPGAKSPEYLDGSLVGDYGFDP 77 Query: 299 FGLGKPAEYLQYDVDSLDQNLA 364 FGLGKPAEYLQ+D+DSLDQNLA Sbjct: 78 FGLGKPAEYLQFDLDSLDQNLA 99
>CB4A_ARATH (Q07473) Chlorophyll a-b binding protein CP29.1, chloroplast| precursor (LHCII protein 4.1) (LHCB4.1) Length = 290 Score = 109 bits (273), Expect = 1e-24 Identities = 51/78 (65%), Positives = 59/78 (75%), Gaps = 1/78 (1%) Frame = +2 Query: 134 PQNGRIVARFGFGXXXXX-XXXXXXXXTTDRPLWFPGAQAPEYLDGTLVGDYGFDPFGLG 310 P +GR A FGFG TTDRPLW+PGA +P++LDG+LVGDYGFDPFGLG Sbjct: 25 PGSGRFTAVFGFGKKKAAPKKSAKKTVTTDRPLWYPGAISPDWLDGSLVGDYGFDPFGLG 84 Query: 311 KPAEYLQYDVDSLDQNLA 364 KPAEYLQ+D+DSLDQNLA Sbjct: 85 KPAEYLQFDIDSLDQNLA 102
>CB4C_ARATH (Q9S7W1) Chlorophyll a-b binding protein CP29.3, chloroplast| precursor (LHCII protein 4.3) (LHCB4.3) Length = 276 Score = 99.0 bits (245), Expect = 3e-21 Identities = 48/87 (55%), Positives = 55/87 (63%), Gaps = 5/87 (5%) Frame = +2 Query: 119 LADPAPQNGRIVARFGFGXXXXXXX-----XXXXXXTTDRPLWFPGAQAPEYLDGTLVGD 283 + DP P GR+ ARFGF DR +WFPGA PE+LDG+++GD Sbjct: 17 IQDPRPGTGRVQARFGFSFGKKKPAPPPKKSRQVQDDGDRLVWFPGANPPEWLDGSMIGD 76 Query: 284 YGFDPFGLGKPAEYLQYDVDSLDQNLA 364 GFDPFGLGKPAEYLQYD D LDQNLA Sbjct: 77 RGFDPFGLGKPAEYLQYDFDGLDQNLA 103
>CB12_PETHY (P13869) Chlorophyll a-b binding protein, chloroplast precursor| (LHCI type II CAB) Length = 270 Score = 62.4 bits (150), Expect = 3e-10 Identities = 25/43 (58%), Positives = 33/43 (76%) Frame = +2 Query: 218 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDS 346 DRPLWFPG+ PE+LDG+L GD+GFDP GLG E L+++ + Sbjct: 64 DRPLWFPGSTPPEWLDGSLPGDFGFDPLGLGSDPESLKWNAQA 106
>CB29_CHLRE (Q93WD2) Chlorophyll a-b binding protein CP29| Length = 279 Score = 59.7 bits (143), Expect = 2e-09 Identities = 26/46 (56%), Positives = 31/46 (67%) Frame = +2 Query: 227 LWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDSLDQNLA 364 LW P PE+LDG+L GD GFDP GL KP+E++ VD DQN A Sbjct: 51 LWLPNTTRPEWLDGSLPGDRGFDPLGLSKPSEFVVIGVDENDQNAA 96
>CB12_LYCES (P10708) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCI type II CAB-7) Length = 270 Score = 57.4 bits (137), Expect = 8e-09 Identities = 23/40 (57%), Positives = 30/40 (75%) Frame = +2 Query: 218 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYD 337 DRPLWFPG+ P +LDG+L GD+GFDP GL E L+++ Sbjct: 64 DRPLWFPGSTPPPWLDGSLPGDFGFDPLGLASDPESLRWN 103
>CB24_ARATH (P27521) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCI type III CAB-4) (LHCP) Length = 251 Score = 47.0 bits (110), Expect = 1e-05 Identities = 22/69 (31%), Positives = 32/69 (46%) Frame = +2 Query: 140 NGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKPA 319 +GR+ F + W PG +P+YL G+L GD GFDP GL + Sbjct: 27 SGRLNRDLSFTSIGSSAKTSSFKVEAKKGEWLPGLASPDYLTGSLAGDNGFDPLGLAEDP 86 Query: 320 EYLQYDVDS 346 E L++ V + Sbjct: 87 ENLKWFVQA 95
>CB4A_LYCES (P27524) Chlorophyll a-b binding protein CP24 10A, chloroplast| precursor (CAB-10A) (LHCP) Length = 256 Score = 45.8 bits (107), Expect = 3e-05 Identities = 20/41 (48%), Positives = 26/41 (63%), Gaps = 6/41 (14%) Frame = +2 Query: 230 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 334 W P + PE+LDG+L GDYGFDP GLGK +L++ Sbjct: 55 WIPAVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKW 95
>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast| precursor (Light-harvesting complex II protein 5) (LHCB5) (LHCIIc) Length = 280 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/50 (44%), Positives = 31/50 (62%), Gaps = 6/50 (12%) Frame = +2 Query: 218 DRPLWFPG-----AQAPEYLDGTLVGDYGFDPFGLG-KPAEYLQYDVDSL 349 DR ++ P ++ PEYL+G + GDYG+DPFGLG KP + +Y L Sbjct: 66 DRRIFLPDGLLDRSEIPEYLNGEVAGDYGYDPFGLGKKPENFAKYQAFEL 115
>CB13_LYCES (P27522) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCI type III CAB-8) Length = 273 Score = 45.8 bits (107), Expect = 3e-05 Identities = 19/33 (57%), Positives = 22/33 (66%) Frame = +2 Query: 218 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGLGKP 316 +R LWF Q+ YLDG L GD+GFDP GL P Sbjct: 52 NRQLWFASKQSLSYLDGRLPGDFGFDPLGLSDP 84
>CB4B_LYCES (P27525) Chlorophyll a-b binding protein CP24 10B, chloroplast| precursor (CAB-10B) (LHCP) Length = 256 Score = 44.7 bits (104), Expect = 6e-05 Identities = 19/41 (46%), Positives = 27/41 (65%), Gaps = 6/41 (14%) Frame = +2 Query: 230 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 334 W P ++ PE+LDG+L GD+GFDP GLGK +L++ Sbjct: 55 WIPAVKSGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 95
>CB4_SPIOL (P36494) Chlorophyll a-b binding protein CP24, chloroplast| precursor Length = 261 Score = 44.3 bits (103), Expect = 7e-05 Identities = 19/41 (46%), Positives = 26/41 (63%), Gaps = 6/41 (14%) Frame = +2 Query: 230 WFPGAQA------PEYLDGTLVGDYGFDPFGLGKPAEYLQY 334 W P + PE+LDG+L GD+GFDP GLGK +L++ Sbjct: 60 WIPAVKGGGNFLDPEWLDGSLPGDFGFDPLGLGKDPAFLKW 100
>CB11_LYCES (P12360) Chlorophyll a-b binding protein 6A, chloroplast precursor| (LHCI type I CAB-6A) (Light-harvesting complex I 26 kDa protein) Length = 246 Score = 43.9 bits (102), Expect = 1e-04 Identities = 20/41 (48%), Positives = 24/41 (58%), Gaps = 1/41 (2%) Frame = +2 Query: 230 WFPGAQAPEYLDGTLVGDYGFDPFGLGK-PAEYLQYDVDSL 349 W PG P YLDG+ GD+GFD GLG+ PA +Y L Sbjct: 49 WMPGQPRPSYLDGSAPGDFGFDSLGLGEVPANLERYKESEL 89
>LH18_EUGGR (P08976) Light-harvesting complex I LH38 proteins precursor| [Contains: LH38 protein 1; LH38 protein 2; LH38 protein 3] (Fragment) Length = 530 Score = 42.0 bits (97), Expect = 4e-04 Identities = 17/28 (60%), Positives = 19/28 (67%) Frame = +2 Query: 224 PLWFPGAQAPEYLDGTLVGDYGFDPFGL 307 PLWFP AP +L+G GD GFDP GL Sbjct: 3 PLWFPNTLAPSWLNGEYYGDRGFDPAGL 30 Score = 40.4 bits (93), Expect = 0.001 Identities = 17/30 (56%), Positives = 18/30 (60%) Frame = +2 Query: 218 DRPLWFPGAQAPEYLDGTLVGDYGFDPFGL 307 +R LWFP P YL G GD GFDP GL Sbjct: 370 ERELWFPNIVPPRYLTGEAYGDKGFDPAGL 399 Score = 33.9 bits (76), Expect = 0.100 Identities = 14/27 (51%), Positives = 15/27 (55%) Frame = +2 Query: 227 LWFPGAQAPEYLDGTLVGDYGFDPFGL 307 LWFP A+ P L G D GFDP L Sbjct: 189 LWFPNAEPPALLTGEYPADRGFDPLNL 215
>LH15_EUGGR (P08975) Light-harvesting complex I LH35 proteins precursor| [Contains: LH35 protein 1; LH35 protein 2] (Fragment) Length = 331 Score = 36.6 bits (83), Expect = 0.015 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +2 Query: 227 LWFPGAQAPEYLDGTLVGDYGFDPFGL-GKPAEYLQYDVDSL 349 +WFPGAQ P +L G D GFDP + P Y + V + Sbjct: 161 VWFPGAQPPAHLTGEYPADRGFDPLSVAADPTVYARMRVSEV 202
>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,| chloroplast precursor (DE Chlorophyll a-b binding protein type I F3) (CAB-F3) (LHCP) Length = 265 Score = 32.3 bits (72), Expect = 0.29 Identities = 18/39 (46%), Positives = 22/39 (56%), Gaps = 3/39 (7%) Frame = +2 Query: 215 TDRPLW---FPGAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 +DRPL+ F G+ P YL G GDYG+D GL E Sbjct: 52 SDRPLYLGPFSGSP-PSYLSGEFPGDYGWDTAGLSADPE 89
>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type III CAB-13) Length = 265 Score = 32.3 bits (72), Expect = 0.29 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 242 AQAPEYLDGTLVGDYGFDPFGLGKPAE 322 AQ P YL+G GDYG+D GL E Sbjct: 61 AQTPSYLNGEFPGDYGWDTAGLSADPE 87
>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,| chloroplast precursor (CAB) Length = 268 Score = 32.3 bits (72), Expect = 0.29 Identities = 14/27 (51%), Positives = 16/27 (59%) Frame = +2 Query: 242 AQAPEYLDGTLVGDYGFDPFGLGKPAE 322 AQ P YL+G GDYG+D GL E Sbjct: 64 AQTPSYLNGEFPGDYGWDTAGLSADPE 90
>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 269 Score = 31.6 bits (70), Expect = 0.50 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + + P YL+G GDYG+D GL E Sbjct: 56 DRPKFLGPFSGETPSYLNGEFAGDYGWDTAGLSSDPE 92
>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast| precursor (LHCII type I CAB-AB10) (LHCP) Length = 268 Score = 31.6 bits (70), Expect = 0.50 Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 3/61 (4%) Frame = +2 Query: 134 PQNGRIVARFGFGXXXXXXXXXXXXXTTDRPLWFPG---AQAPEYLDGTLVGDYGFDPFG 304 P + ++ GF T DR + + G + P YL G GDYG+D G Sbjct: 28 PISSTLIVTAGFTMLKHAAKSKVSSSTCDRRVKYLGPFSGEWPSYLTGEFPGDYGWDTAG 87 Query: 305 L 307 L Sbjct: 88 L 88
>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor| (LHCII type I CAB-5) (LHCP) (Fragment) Length = 237 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 25 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 61
>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor| (LHCII type I CAB-37) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 53 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor| (LHCII type I CAB-4) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 53 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor| (LHCII type I CAB-36) (LHCP) Length = 265 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 53 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 89
>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 205 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 52 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88
>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 263 Score = 30.8 bits (68), Expect = 0.84 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 51 DRPKYLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 87
>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor| (Allergen Api g 3) Length = 264 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G GDYG+D GL E Sbjct: 63 EAPSYLTGEFPGDYGWDTAGLSADPE 88
>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 264 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 52 DRPKFLGPFSEQTPSYLTGEFPGDYGWDTAGLSADPE 88
>ZCHC2_MOUSE (Q69ZB8) Zinc finger CCHC domain-containing protein 2 (Fragment)| Length = 1168 Score = 30.4 bits (67), Expect = 1.1 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = -3 Query: 172 AEAEPRHDAPVLRRR-VRQPGPGTCSPRRPPTKP 74 A+A P AP+ RRR R P P T PR PP P Sbjct: 27 ADARPGAKAPLRRRRDCRPPPPPTGLPRGPPPPP 60
>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor| (LHCII type II CAB-215) (LHCP) Length = 265 Score = 30.4 bits (67), Expect = 1.1 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 53 DRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPE 89
>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor| (LHCII type I CAB-7) (LHCP) Length = 267 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G GDYG+D GL E Sbjct: 66 EAPSYLTGEFPGDYGWDTAGLSADPE 91
>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor| (LHCII type I CAB-22L) (LHCP) Length = 267 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G GDYG+D GL E Sbjct: 66 EAPSYLTGEFPGDYGWDTAGLSADPE 91
>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/35 (42%), Positives = 18/35 (51%), Gaps = 1/35 (2%) Frame = +2 Query: 233 FPGAQAPEYLDGTLVGDYGFDPFGL-GKPAEYLQY 334 F PEYL G GDYG+D GL P + +Y Sbjct: 45 FSENDTPEYLTGEFPGDYGWDTAGLSADPQTFARY 79
>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor| (LHCII type I CAB-25) (LHCP) Length = 266 Score = 30.4 bits (67), Expect = 1.1 Identities = 13/26 (50%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G GDYG+D GL E Sbjct: 65 EAPSYLTGEFPGDYGWDTAGLSADPE 90
>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor| (LHCII type II CAB-151) (LHCP) Length = 265 Score = 30.0 bits (66), Expect = 1.4 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DRP + Q P YL G GDYG+D GL E Sbjct: 53 DRPKYLGPFSDQIPSYLTGEFPGDYGWDTAGLSADPE 89
>STS_MOUSE (P50427) Steryl-sulfatase precursor (EC 3.1.6.2) (Steroid| sulfatase) (Steryl-sulfate sulfohydrolase) (Arylsulfatase C) (ASC) Length = 624 Score = 29.6 bits (65), Expect = 1.9 Identities = 18/42 (42%), Positives = 20/42 (47%), Gaps = 8/42 (19%) Frame = -3 Query: 169 EAEPRH-------DAPVLRRRVR-QPGPGTCSPRRPPTKPWL 68 EAEPRH DA R R +P P +PR KPWL Sbjct: 525 EAEPRHREVLDAIDAAARAHRARLRPAPDQLAPRHLMWKPWL 566
>DHGY_HYPME (P36234) Glycerate dehydrogenase (EC 1.1.1.29) (NADH-dependent| hydroxypyruvate reductase) (HPR) (GDH) (Hydroxypyruvate dehydrogenase) (Glyoxylate reductase) Length = 321 Score = 29.6 bits (65), Expect = 1.9 Identities = 19/53 (35%), Positives = 23/53 (43%), Gaps = 2/53 (3%) Frame = +2 Query: 212 TTDRPLWFPGAQAPEYLDGTLVGDYGFDPFG--LGKPAEYLQYDVDSLDQNLA 364 T P W P E LD +G YGF G L K A+ D+D D + A Sbjct: 129 TRSWPGWEPLELVGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA 181
>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor| (LHCII type I CAB-13) (LHCP) Length = 266 Score = 29.6 bits (65), Expect = 1.9 Identities = 12/21 (57%), Positives = 14/21 (66%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGL 307 +AP YL G GDYG+D GL Sbjct: 65 EAPSYLTGEFPGDYGWDTAGL 85
>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 264 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 63 ESPSYLTGEFPGDYGWDTAGLSADPE 88
>ZAR1_RAT (Q7TSX9) Zygote arrest 1 (Oocyte-specific maternal effect factor)| Length = 361 Score = 29.3 bits (64), Expect = 2.5 Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 17/50 (34%) Frame = -3 Query: 169 EAEPRHDAPV---LRRRVRQPG---------PGTCSPRRP-----PTKPW 71 + PR DA V L RR QPG PG+C PR P P + W Sbjct: 80 QVNPRRDASVQCSLGRRTLQPGRRRASPDARPGSCQPRSPARAGRPPRSW 129
>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 256 Score = 29.3 bits (64), Expect = 2.5 Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 2/37 (5%) Frame = +2 Query: 218 DRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 DR W P YL G GDYG+D GL E Sbjct: 43 DRAKWLGPFSTNTPAYLTGEFPGDYGWDTAGLSADPE 79
>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor| (LHCII type I CAB-1B) (LHCP) Length = 265 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPE 89
>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor| (LHCII type I CAB-21) (LHCP) Length = 265 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 64 ESPSYLTGEFPGDYGWDTAGLSADPE 89
>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast| precursor (LHCII type I CAB-AB80) (LHCP) Length = 269 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 68 ESPSYLTGEFPGDYGWDTAGLSADPE 93
>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I| CAB-AB96) (LHCP) (Major 15) (Fragment) Length = 228 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 27 ESPSYLTGEFPGDYGWDTAGLSADPE 52
>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor| (LHCII type I CAB-3C) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor| (LHCII type I CAB-8) Length = 268 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 67 ESPSYLTGEFPGDYGWDTAGLSADPE 92
>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor| (LHCII type I CAB-50) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor| (LHCII type I CAB-40) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor| (LHCII type I CAB-C) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 66 ESPSYLTGEFPGDYGWDTAGLSADPE 91
>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (CAB-140) (LHCP) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast| precursor (LHCII type I CAB-165/180) Length = 267 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor| (LHCII type I CAB-E) (LHCP) Length = 266 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPE 90
>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor| (LHCII type I CAB-16) (LHCP) Length = 266 Score = 29.3 bits (64), Expect = 2.5 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 ++P YL G GDYG+D GL E Sbjct: 65 ESPSYLTGEFPGDYGWDTAGLSADPE 90
>FOG1_XENLA (Q9I9K0) Zinc finger protein FOG (Friend of GATA) (xFOG) (Fragment)| Length = 1061 Score = 28.9 bits (63), Expect = 3.2 Identities = 12/27 (44%), Positives = 16/27 (59%) Frame = -3 Query: 157 RHDAPVLRRRVRQPGPGTCSPRRPPTK 77 RHD P+ RR V +PGP + P T+ Sbjct: 655 RHDPPLRRREVNKPGPPYTTQPTPRTR 681
>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 266 Score = 28.9 bits (63), Expect = 3.2 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%) Frame = +2 Query: 215 TDRPLWFP--GAQAPEYLDGTLVGDYGFDPFGLGKPAE 322 +DR L+ + P YL G GDYG+D GL E Sbjct: 53 SDRVLYLGPLSGEPPSYLTGEFPGDYGWDTAGLSADPE 90
>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor| (LHCII type II CAB-1A) (LHCP) Length = 278 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 77 EPPSYLTGEFPGDYGWDTAGLSADPE 102
>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,| chloroplast precursor (Chlorophyll a-b binding protein type II 1A) (CAB) (LHCP) Length = 278 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 77 EPPSYLTGEFPGDYGWDTAGLSADPE 102
>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor| (LHCII type I CAB-2) (LHCP) Length = 261 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 60 EPPSYLTGEFPGDYGWDTAGLSADPE 85
>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor| (LHCII type I CAB-M9) (LHCP) Length = 265 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) Length = 265 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor| (LHCII type I CAB) (LHCP) (Fragment) Length = 245 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 44 EPPSYLTGEFPGDYGWDTAGLSADPE 69
>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 265 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor| (LHCII type I CAB-3) (LHCP) Length = 263 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 62 EPPSYLTGEFPGDYGWDTAGLSADPE 87
>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,| chloroplast precursor (Chlorophyll a-b binding protein type II 1B) (CAB) (LHCP) Length = 274 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 73 EPPSYLTGEFPGDYGWDTAGLSADPE 98
>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 262 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 61 EPPSYLTGEFPGDYGWDTAGLSADPE 86
>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor| (LHCII type I CAB-1) (LHCP) Length = 266 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 64 EPPSYLTGEFPGDYGWDTAGLSADPE 89
>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) (Fragment) Length = 255 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 54 EPPSYLTGEFPGDYGWDTAGLSADPE 79
>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1| (Chlorophyll a-b binding protein of LHCII type I) (CAB) (LHCP) (Fragment) Length = 206 Score = 28.5 bits (62), Expect = 4.2 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 + P YL G GDYG+D GL E Sbjct: 5 EPPSYLTGEFPGDYGWDTAGLSADPE 30
>VHS_HHV2H (P68340) Virion host shutoff protein| Length = 492 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 133 RRVRQPGPGTCSPRRPPTKPWLLTRSS*LCPPRPLRALGWRLV 5 R R GPG +P P+KP L R + L R LRALG+ + Sbjct: 148 RGTRAAGPGPAAPSGAPSKPAL--RLAHLFCIRVLRALGYAYI 188
>VHS_HHV2G (P68339) Virion host shutoff protein| Length = 492 Score = 28.1 bits (61), Expect = 5.5 Identities = 18/43 (41%), Positives = 23/43 (53%) Frame = -3 Query: 133 RRVRQPGPGTCSPRRPPTKPWLLTRSS*LCPPRPLRALGWRLV 5 R R GPG +P P+KP L R + L R LRALG+ + Sbjct: 148 RGTRAAGPGPAAPSGAPSKPAL--RLAHLFCIRVLRALGYAYI 188
>SYN1_BOVIN (P17599) Synapsin-1 (Synapsin I)| Length = 706 Score = 28.1 bits (61), Expect = 5.5 Identities = 24/79 (30%), Positives = 28/79 (35%) Frame = -3 Query: 253 GRLRAGEPQRPVXXXXXXXXXXXXXXLAEAEPRHDAPVLRRRVRQPGPGTCSPRRPPTKP 74 G+ R G PQ+P A PR P +QP P P PTKP Sbjct: 584 GQQRQGPPQKPPGPAGPTRQASQ----AGPMPRTGPPT----TQQPRPSGPGPAGRPTKP 635 Query: 73 WLLTRSS*LCPPRPLRALG 17 L + S PP A G Sbjct: 636 QLAQKPSQDVPPPATAAAG 654
>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor| (LHCII type I CAB-22R) (LHCP) Length = 267 Score = 28.1 bits (61), Expect = 5.5 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G DYG+D GL E Sbjct: 66 EAPSYLTGEFPSDYGWDTAGLSADPE 91
>SYN1_RAT (P09951) Synapsin-1 (Synapsin I)| Length = 704 Score = 28.1 bits (61), Expect = 5.5 Identities = 24/79 (30%), Positives = 29/79 (36%) Frame = -3 Query: 253 GRLRAGEPQRPVXXXXXXXXXXXXXXLAEAEPRHDAPVLRRRVRQPGPGTCSPRRPPTKP 74 G+ R G PQ+P A PR P +QP P P PTKP Sbjct: 582 GQQRQGPPQKPPGPAGPIRQASQ----AGPGPRTGPPT----TQQPRPSGPGPAGRPTKP 633 Query: 73 WLLTRSS*LCPPRPLRALG 17 L + S PP + A G Sbjct: 634 QLAQKPSQDVPPPIIAAAG 652
>GATA5_ARATH (Q8VZP4) GATA transcription factor 5 (AtGATA-5)| Length = 308 Score = 28.1 bits (61), Expect = 5.5 Identities = 17/39 (43%), Positives = 22/39 (56%) Frame = +2 Query: 230 WFPGAQAPEYLDGTLVGDYGFDPFGLGKPAEYLQYDVDS 346 W P A+A E+L G L GD+ FD GL + D+DS Sbjct: 3 WLPEAEAEEHLKGILSGDF-FD--GLTNHLDCPLEDIDS 38
>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor| (LHCII type I CAB-48) (LHCP) Length = 264 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +2 Query: 251 PEYLDGTLVGDYGFDPFGLGKPAE 322 P YL G GDYG+D GL E Sbjct: 65 PSYLTGEFPGDYGWDTEGLSADPE 88
>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,| chloroplast precursor (CAB) (LHCP) Length = 253 Score = 27.7 bits (60), Expect = 7.2 Identities = 12/24 (50%), Positives = 13/24 (54%) Frame = +2 Query: 251 PEYLDGTLVGDYGFDPFGLGKPAE 322 P YL G GDYG+D GL E Sbjct: 54 PAYLTGEFPGDYGWDTAGLSADPE 77
>CDT1_MOUSE (Q8R4E9) DNA replication factor Cdt1 (Double parked homolog) (DUP)| (Retroviral insertion site 2 protein) Length = 557 Score = 27.7 bits (60), Expect = 7.2 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 3/34 (8%) Frame = -3 Query: 166 AEPRHD--APVLRRRVRQPGPGTCSPRRP-PTKP 74 AEP D AP+ RRR+R PG +C P P+ P Sbjct: 52 AEPGSDQPAPLARRRLRLPGLDSCPSSLPEPSSP 85
>ZDS_MAIZE (Q9ZTP4) Zeta-carotene desaturase, chloroplast precursor (EC| 1.14.99.30) (Carotene 7,8-desaturase) Length = 570 Score = 27.3 bits (59), Expect = 9.3 Identities = 20/55 (36%), Positives = 22/55 (40%), Gaps = 8/55 (14%) Frame = -3 Query: 148 APVLRRRVRQPGPGTCSPRRPP--------TKPWLLTRSS*LCPPRPLRALGWRL 8 AP L R +PG G PRR T P RS L PP P G +L Sbjct: 11 APALAPRRARPGTGLVPPRRASAVAARSTVTSPTWRQRSQRLFPPEPEHYRGPKL 65
>ROBO4_RAT (Q80W87) Roundabout homolog 4 precursor| Length = 961 Score = 27.3 bits (59), Expect = 9.3 Identities = 19/48 (39%), Positives = 20/48 (41%), Gaps = 12/48 (25%) Frame = -3 Query: 124 RQPGPGTCSPRRPP--------TKPWLLTRSS*LC----PPRPLRALG 17 + PGP TCSPR P P L SS L PP PL G Sbjct: 694 QSPGPNTCSPREAPGAVVAWRALGPQLHRNSSELAARPLPPTPLSLRG 741
>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor| (LHCII type I CAB-91R) (LHCP) Length = 267 Score = 27.3 bits (59), Expect = 9.3 Identities = 12/26 (46%), Positives = 14/26 (53%) Frame = +2 Query: 245 QAPEYLDGTLVGDYGFDPFGLGKPAE 322 +AP YL G GDYG+D L E Sbjct: 66 EAPSYLTGEFPGDYGWDTAELSADPE 91
>ZN335_HUMAN (Q9H4Z2) Zinc finger protein 335| Length = 1342 Score = 27.3 bits (59), Expect = 9.3 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%) Frame = -3 Query: 172 AEAEPRHDAPVLRR-RVRQPGPGTCSPRRPPTKPWLLTR 59 ++ P D P R+ R+++P P T PRR P +P L R Sbjct: 321 SDYNPAEDEPRGRQLRLQRPTPSTPRPRRRPGRPRKLPR 359 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.138 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 36,009,953 Number of Sequences: 219361 Number of extensions: 646435 Number of successful extensions: 1429 Number of sequences better than 10.0: 83 Number of HSP's better than 10.0 without gapping: 1370 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1424 length of database: 80,573,946 effective HSP length: 97 effective length of database: 59,295,929 effective search space used: 1423102296 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (22.0 bits)
