>gb|M98254.1|BLYPSAD Barley PSI-D subunit of photosystem I (PsaD) mRNA, complete cds
          Length = 810

 Score =  305 bits (154), Expect = 3e-80
 Identities = 157/158 (99%)
 Strand = Plus / Plus

                                                                       
Query: 55  atctcctcgccaagaaccacaagctagagcgccaccgccatggccatggccacgcaagcc 114
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   atctcctcgccaagaaccacaagctagagcgccaccgccatggccatggccacgcaagcc 60

                                                                       
Query: 115 tcggcggcgacgcgccacctgatcaccgcggcctggtcgccatccgacaagccccgcccc 174
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 61  tcggcggcgacgcgccacctgatcaccgcggcctggtcgccatccgccaagccccgcccc 120

                                                 
Query: 175 gccaccctcgccatgccatcctccgcccgcggcccggc 212
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccaccctcgccatgccatcctccgcccgcggcccggc 158

>gb|BC035756.1| Homo sapiens, clone IMAGE:5763894, mRNA
          Length = 864

 Score =  238 bits (120), Expect = 6e-60
 Identities = 129/132 (97%)
 Strand = Plus / Plus

                                                                       
Query: 81  gagcgccaccgccatggccatggccacgcaagcctcggcggcgacgcgccacctgatcac 140
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10  gagcgccatcgccatggccatggccacgcaagcctcggcggcgacgcgccacctgatcac 69

                                                                       
Query: 141 cgcggcctggtcgccatccgacaagccccgccccgccaccctcgccatgccatcctccgc 200
           ||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 70  cgcggcctggtcgccctccgccaagccccgccccgccaccctcgccatgccatcctccgc 129

                       
Query: 201 ccgcggcccggc 212
           ||||||||||||
Sbjct: 130 ccgcggcccggc 141

>gb|AF147726.1|AF147726 Zea mays ferredoxin-binding subunit (psi-d1) mRNA, complete cds
          Length = 646

 Score = 67.9 bits (34), Expect = 1e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                     
Query: 94  atggccatggccacgcaagcctcggcggcgacgcgccacctg 135
           ||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 55  atggccatggccacgcaagcctccgcggccacgcgccacctg 96

>ref|XM_483783.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 831

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  ccatggccatggccacgcaagcctc 116
           |||||||||||||||||||||||||
Sbjct: 42  ccatggccatggccacgcaagcctc 66

>ref|XM_507339.1| PREDICTED Oryza sativa (japonica cultivar-group), P0604E01.24 mRNA
          Length = 855

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  ccatggccatggccacgcaagcctc 116
           |||||||||||||||||||||||||
Sbjct: 66  ccatggccatggccacgcaagcctc 90

>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete
                sequence
          Length = 28434780

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                         
Query: 92       ccatggccatggccacgcaagcctc 116
                |||||||||||||||||||||||||
Sbjct: 28076933 ccatggccatggccacgcaagcctc 28076909

>dbj|AP005544.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
             clone:P0604E01
          Length = 159049

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Minus

                                      
Query: 92    ccatggccatggccacgcaagcctc 116
             |||||||||||||||||||||||||
Sbjct: 74428 ccatggccatggccacgcaagcctc 74404

>dbj|AK120372.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013070L10, full
           insert sequence
          Length = 855

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  ccatggccatggccacgcaagcctc 116
           |||||||||||||||||||||||||
Sbjct: 66  ccatggccatggccacgcaagcctc 90

>dbj|AK072473.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023114B22, full
            insert sequence
          Length = 2756

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                     
Query: 92   ccatggccatggccacgcaagcctc 116
            |||||||||||||||||||||||||
Sbjct: 1967 ccatggccatggccacgcaagcctc 1991

>dbj|AK061775.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-D04, full
           insert sequence
          Length = 831

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 25/25 (100%)
 Strand = Plus / Plus

                                    
Query: 92  ccatggccatggccacgcaagcctc 116
           |||||||||||||||||||||||||
Sbjct: 42  ccatggccatggccacgcaagcctc 66

>gb|AY224449.1| Oryza sativa (japonica cultivar-group) isolate 23061 chloroplast
           photosystem I reaction center subunit II precursor-like
           protein mRNA, complete cds
          Length = 612

 Score = 46.1 bits (23), Expect = 0.044
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 94  atggccatggccacgcaagcctc 116
           |||||||||||||||||||||||
Sbjct: 1   atggccatggccacgcaagcctc 23

>gb|AC009909.6| Drosophila melanogaster clone BACR30P05, complete sequence
          Length = 171772

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    caccgccatggccatggccac 107
             |||||||||||||||||||||
Sbjct: 71847 caccgccatggccatggccac 71867

>gb|AC090324.7| Homo sapiens chromosome 18, clone RP11-693L9, complete sequence
          Length = 154516

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 38     tctccgctctcttccccatctcctc 62
              ||||| |||||||||||||||||||
Sbjct: 103867 tctcccctctcttccccatctcctc 103843

>tpg|BK003292.1| TPA: TPA_inf: Drosophila melanogaster HDC00429 (HDC00429) gene,
           complete cds
          Length = 1964

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 87  caccgccatggccatggccac 107
           |||||||||||||||||||||
Sbjct: 322 caccgccatggccatggccac 342

>gb|AC110719.7| Homo sapiens 3 BAC RP11-709N4 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 153748

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 38    tctccgctctcttccccatctcctc 62
             ||||| |||||||||||||||||||
Sbjct: 25916 tctcccctctcttccccatctcctc 25892

>gb|L80129.1|DRO71DC58Z Drosophila melanogaster (subclone D71 1_f7 from P1 DS02782) DNA
            sequence
          Length = 4562

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 87   caccgccatggccatggccac 107
            |||||||||||||||||||||
Sbjct: 3562 caccgccatggccatggccac 3542

>gb|AC114808.4| Homo sapiens BAC clone RP11-1268F2 from 2, complete sequence
          Length = 176316

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 180   cctcgccatgccatcctccgc 200
             |||||||||||||||||||||
Sbjct: 32882 cctcgccatgccatcctccgc 32862

>emb|X79885.1|CLBCOIX C.lacryma-jobi (Adlay) Beta-Coixin gene
          Length = 1643

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 83   gcgccaccgccatggccatgg 103
            |||||||||||||||||||||
Sbjct: 1457 gcgccaccgccatggccatgg 1437

>emb|X57833.1|CLJACOIX C.lacryma-jobi mRNA for alpha-coixin 17kDa
          Length = 1019

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 83  gcgccaccgccatggccatgg 103
           |||||||||||||||||||||
Sbjct: 761 gcgccaccgccatggccatgg 741

>gb|AY107101.1| Zea mays PCO079267 mRNA sequence
          Length = 1088

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 86  ccaccgccatggccatggcca 106
           |||||||||||||||||||||
Sbjct: 60  ccaccgccatggccatggcca 80

>gb|AE003582.4| Drosophila melanogaster chromosome 2L, section 9 of 83 of the complete
             sequence
          Length = 295132

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 87    caccgccatggccatggccac 107
             |||||||||||||||||||||
Sbjct: 94705 caccgccatggccatggccac 94725

>gb|AC122463.4| Mus musculus BAC clone RP24-296C19 from 9, complete sequence
          Length = 162528

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 158   ccgacaagccccgccccgcca 178
             |||||||||||||||||||||
Sbjct: 11488 ccgacaagccccgccccgcca 11468

>gb|AC002444.1|AC002444 Drosophila melanogaster (P1 DS02782 (D71)) DNA sequence, complete
             sequence
          Length = 80124

 Score = 42.1 bits (21), Expect = 0.68
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 87    caccgccatggccatggccac 107
             |||||||||||||||||||||
Sbjct: 21037 caccgccatggccatggccac 21017

>gb|AY570699.1| Ostreococcus tauri AGPLU1 (agplu1) gene, complete cds
          Length = 1591

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 13 ctccatctcccgcgcgcgcg 32
          ||||||||||||||||||||
Sbjct: 84 ctccatctcccgcgcgcgcg 65

>gb|AC154465.2| Mus musculus BAC clone RP24-146O1 from chromosome 14, complete sequence
          Length = 189186

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 85    gccaccgccatggccatggccacg 108
             ||||| ||||||||||||||||||
Sbjct: 30609 gccacagccatggccatggccacg 30632

>gb|AC123826.4| Mus musculus BAC clone RP24-97K3 from chromosome 8, complete sequence
          Length = 188704

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 50     tccccatctcctcgccaaga 69
              ||||||||||||||||||||
Sbjct: 187504 tccccatctcctcgccaaga 187485

>gb|AC129606.4| Mus musculus BAC clone RP23-128L6 from 8, complete sequence
          Length = 235915

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 50    tccccatctcctcgccaaga 69
             ||||||||||||||||||||
Sbjct: 52961 tccccatctcctcgccaaga 52942

>gb|AC134528.6| Mus musculus BAC clone RP24-502G8 from chromosome 10, complete sequence
          Length = 166393

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 41     ccgctctcttccccatctcc 60
              ||||||||||||||||||||
Sbjct: 140794 ccgctctcttccccatctcc 140775

>emb|BX323573.7| Zebrafish DNA sequence from clone DKEYP-98F5, complete sequence
          Length = 181694

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 41     ccgctctcttccccatctcc 60
              ||||||||||||||||||||
Sbjct: 172504 ccgctctcttccccatctcc 172523

>gb|DQ397565.1| Cenarchaeum symbiosum clone C05G03, complete sequence
          Length = 45533

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccgcggcctggtcgccatcc 159
             ||||||||||||||||||||
Sbjct: 43510 ccgcggcctggtcgccatcc 43491

>gb|DQ397554.1| Cenarchaeum symbiosum clone C08F03, complete sequence
          Length = 36219

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 140   ccgcggcctggtcgccatcc 159
             ||||||||||||||||||||
Sbjct: 14173 ccgcggcctggtcgccatcc 14154

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 86       ccaccgccatggccatggccacgc 109
                |||| |||||||||||||||||||
Sbjct: 16821217 ccacggccatggccatggccacgc 16821240

>dbj|AP005559.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
             clone:OJ1163_C07
          Length = 107121

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 86    ccaccgccatggccatggccacgc 109
             |||| |||||||||||||||||||
Sbjct: 18908 ccacggccatggccatggccacgc 18931

>gb|AC154649.3| Mus musculus BAC clone RP23-156O5 from chromosome 14, complete sequence
          Length = 227676

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 85     gccaccgccatggccatggccacg 108
              ||||| ||||||||||||||||||
Sbjct: 214743 gccacagccatggccatggccacg 214766

>gb|AC135859.4| Mus musculus BAC clone RP24-151D9 from 10, complete sequence
          Length = 182809

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gctctcttccccatctcctc 62
              ||||||||||||||||||||
Sbjct: 124042 gctctcttccccatctcctc 124061

>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete
              sequence
          Length = 246587

 Score = 40.1 bits (20), Expect = 2.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 43     gctctcttccccatctcctc 62
              ||||||||||||||||||||
Sbjct: 185315 gctctcttccccatctcctc 185334


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,551,055
Number of Sequences: 3902068
Number of extensions: 1551055
Number of successful extensions: 149997
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 149678
Number of HSP's gapped (non-prelim): 319
length of query: 212
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 190
effective length of database: 17,147,199,772
effective search space: 3257967956680
effective search space used: 3257967956680
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)