| Clone Name | baet91d04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009445.1| Triticum aestivum clone wlmk8.pk0008.e8:fis, full insert mRNA sequence Length = 2162 Score = 779 bits (393), Expect = 0.0 Identities = 445/461 (96%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 1 cactctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgat 60 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 843 cactctcaggatgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgat 902 Query: 61 ggaactaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggag 120 |||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||||| Sbjct: 903 ggaactaatgacaagatccaatctgtgattgagtctggtgtttttcctcgccttgtggag 962 Query: 121 cttctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatc 180 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 963 cttctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatt 1022 Query: 181 gtcactggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctc 240 ||||||||||||||||||||||||||||| ||||||||| ||||||| |||||||||||| Sbjct: 1023 gtcactggtgatgatttgcagactcagtgtgtcattgatcaccaagcacttccctgtctc 1082 Query: 241 ttgaacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatc 300 |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1083 ttgaacctcttgactaccaaccacaagaaaagcatcaagaaagaagcatgctggacaatc 1142 Query: 301 tcaaacatcacagctggtaaccgggaccagattcaggctgttatccaggcaaacattatt 360 ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 1143 tcaaacatcacagctggtaaccgggaccagattcaggctgtcatccaggcaaatattatt 1202 Query: 361 ggtcctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcagcttgg 420 ||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| Sbjct: 1203 ggtcctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcggcctgg 1262 Query: 421 gcaatttcaaatgccacttctggtgg-acacatgatcagat 460 |||||||||||||||||||||||||| |||||||| ||||| Sbjct: 1263 gcaatttcaaatgccacttctggtggaacacatgaccagat 1303
>ref|NM_185275.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1605 Score = 472 bits (238), Expect = e-130 Identities = 404/458 (88%), Gaps = 1/458 (0%) Strand = Plus / Plus Query: 4 tctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgga 63 ||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| Sbjct: 775 tctcaggacgaggaggtcctgactgatgcctgctgggctctttcttatttgtctgatgga 834 Query: 64 actaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagctt 123 |||||||| ||||||||| ||||||| ||||| || || || || |||||||||| ||| Sbjct: 835 actaatgataagatccaagctgtgatagaatcaggagtgttcccaaggcttgtggaactt 894 Query: 124 ctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtc 183 ||| |||| ||||||||||| || |||||||||||| ||||||||||||||||||||||| Sbjct: 895 ctcatgcatccttcggcttcagtgctcattccagctttgcgcacggtgggtaacatcgtc 954 Query: 184 actggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctcttg 243 ||||| ||||| ||||||||||||| ||||| ||| | ||||| ||||| ||||||||| Sbjct: 955 actggggatgacatgcagactcagtgtgtcatcgatcatcaagctcttccatgtctcttg 1014 Query: 244 aacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatctca 303 ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1015 aacctcttgaccaacaatcataagaaaagcatcaagaaagaagcatgctggactatctca 1074 Query: 304 aacatcacagctggtaaccgggaccagattcaggctgttatccaggcaaacattattggt 363 |||||||| ||||| || |||| |||||||||||||| ||| | |||||||| |||| | Sbjct: 1075 aacatcactgctggcaatagggaacagattcaggctgtgatcaatgcaaacataattgct 1134 Query: 364 cctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcagcttgggca 423 ||||| || ||||| |||||| ||||||||||||||| ||||| ||||| || |||||| Sbjct: 1135 cctctagtacatctgctgcaaactgctgaatttgacatcaagaaagaggctgcgtgggca 1194 Query: 424 atttcaaatgccacttctggtgg-acacatgatcagat 460 || |||||||||||||||||||| |||||||||||||| Sbjct: 1195 atctcaaatgccacttctggtggaacacatgatcagat 1232
>dbj|AK100133.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023010D07, full insert sequence Length = 2275 Score = 472 bits (238), Expect = e-130 Identities = 404/458 (88%), Gaps = 1/458 (0%) Strand = Plus / Plus Query: 4 tctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgga 63 ||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| Sbjct: 907 tctcaggacgaggaggtcctgactgatgcctgctgggctctttcttatttgtctgatgga 966 Query: 64 actaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagctt 123 |||||||| ||||||||| ||||||| ||||| || || || || |||||||||| ||| Sbjct: 967 actaatgataagatccaagctgtgatagaatcaggagtgttcccaaggcttgtggaactt 1026 Query: 124 ctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtc 183 ||| |||| ||||||||||| || |||||||||||| ||||||||||||||||||||||| Sbjct: 1027 ctcatgcatccttcggcttcagtgctcattccagctttgcgcacggtgggtaacatcgtc 1086 Query: 184 actggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctcttg 243 ||||| ||||| ||||||||||||| ||||| ||| | ||||| ||||| ||||||||| Sbjct: 1087 actggggatgacatgcagactcagtgtgtcatcgatcatcaagctcttccatgtctcttg 1146 Query: 244 aacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatctca 303 ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1147 aacctcttgaccaacaatcataagaaaagcatcaagaaagaagcatgctggactatctca 1206 Query: 304 aacatcacagctggtaaccgggaccagattcaggctgttatccaggcaaacattattggt 363 |||||||| ||||| || |||| |||||||||||||| ||| | |||||||| |||| | Sbjct: 1207 aacatcactgctggcaatagggaacagattcaggctgtgatcaatgcaaacataattgct 1266 Query: 364 cctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcagcttgggca 423 ||||| || ||||| |||||| ||||||||||||||| ||||| ||||| || |||||| Sbjct: 1267 cctctagtacatctgctgcaaactgctgaatttgacatcaagaaagaggctgcgtgggca 1326 Query: 424 atttcaaatgccacttctggtgg-acacatgatcagat 460 || |||||||||||||||||||| |||||||||||||| Sbjct: 1327 atctcaaatgccacttctggtggaacacatgatcagat 1364
>dbj|AB024311.1| Oryza sativa (japonica cultivar-group) mRNA for importin alpha 1b, complete cds Length = 2632 Score = 472 bits (238), Expect = e-130 Identities = 404/458 (88%), Gaps = 1/458 (0%) Strand = Plus / Plus Query: 4 tctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgga 63 ||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| Sbjct: 919 tctcaggacgaggaggtcctgactgatgcctgctgggctctttcttatttgtctgatgga 978 Query: 64 actaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagctt 123 |||||||| ||||||||| ||||||| ||||| || || || || |||||||||| ||| Sbjct: 979 actaatgataagatccaagctgtgatagaatcaggagtgttcccaaggcttgtggaactt 1038 Query: 124 ctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtc 183 ||| |||| ||||||||||| || |||||||||||| ||||||||||||||||||||||| Sbjct: 1039 ctcatgcatccttcggcttcagtgctcattccagctttgcgcacggtgggtaacatcgtc 1098 Query: 184 actggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctcttg 243 ||||| ||||| ||||||||||||| ||||| ||| | ||||| ||||| ||||||||| Sbjct: 1099 actggggatgacatgcagactcagtgtgtcatcgatcatcaagctcttccatgtctcttg 1158 Query: 244 aacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatctca 303 ||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||| Sbjct: 1159 aacctcttgaccaacaatcataagaaaagcatcaagaaagaagcatgctggactatctca 1218 Query: 304 aacatcacagctggtaaccgggaccagattcaggctgttatccaggcaaacattattggt 363 |||||||| ||||| || |||| |||||||||||||| ||| | |||||||| |||| | Sbjct: 1219 aacatcactgctggcaatagggaacagattcaggctgtgatcaatgcaaacataattgct 1278 Query: 364 cctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcagcttgggca 423 ||||| || ||||| |||||| ||||||||||||||| ||||| ||||| || |||||| Sbjct: 1279 cctctagtacatctgctgcaaactgctgaatttgacatcaagaaagaggctgcgtgggca 1338 Query: 424 atttcaaatgccacttctggtgg-acacatgatcagat 460 || |||||||||||||||||||| |||||||||||||| Sbjct: 1339 atctcaaatgccacttctggtggaacacatgatcagat 1376
>gb|AY103821.1| Zea mays PCO084551 mRNA sequence Length = 2318 Score = 446 bits (225), Expect = e-122 Identities = 403/461 (87%), Gaps = 1/461 (0%) Strand = Plus / Plus Query: 1 cactctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgat 60 ||||||||||| |||||||| || ||||||||||| |||||||| || ||||| |||||| Sbjct: 871 cactctcaggatgaggaggtcctaactgatgcctgttgggctctatcatacctatctgat 930 Query: 61 ggaactaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggag 120 || ||||||||||| |||||| |||| |||||||||||||| || ||||| |||||||| Sbjct: 931 gggactaatgacaaaatccaagctgttattgaatctggcgtgttccctcgccttgtggaa 990 Query: 121 cttctcttgcacccttcggcttctgttctcattccagctctgcgcacggtgggtaacatc 180 ||||| |||| ||||| || ||||| || |||||||||||||||||||||||||||||| Sbjct: 991 cttctgatgcatccttcagcctctgtactgattccagctctgcgcacggtgggtaacatc 1050 Query: 181 gtcactggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctc 240 || ||||| || || ||||||||||||| |||||||| || ||||| ||||| || || Sbjct: 1051 gtaactggggacgacatgcagactcagtgtgtcattgacaatcaagcacttccatgcctt 1110 Query: 241 ttgaacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatc 300 |||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| ||| Sbjct: 1111 ttgaacctactgaccaccaaccacaagaaaagcatcaagaaagaagcatgctggacaatc 1170 Query: 301 tcaaacatcacagctggtaaccgggaccagattcaggctgttatccaggcaaacattatt 360 ||||||||||||||||||||| ||| |||||||||||||| ||| | ||||| || ||| Sbjct: 1171 tcaaacatcacagctggtaacaaggagcagattcaggctgtgatcaatgcaaatataatt 1230 Query: 361 ggtcctctggtccatctcctgcaaggtgctgaatttgacattaagaaggaggcagcttgg 420 | |||||||| || ||||||||| ||||||||||||||| ||||| || ||||| ||| Sbjct: 1231 gcacctctggtgcaactcctgcaaactgctgaatttgacatcaagaaagaagcagcctgg 1290 Query: 421 gcaatttcaaatgccacttctggtgg-acacatgatcagat 460 |||||||||||||||||||||||||| |||||||||||||| Sbjct: 1291 gcaatttcaaatgccacttctggtggcacacatgatcagat 1331
>gb|AC087551.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0431G05, complete sequence Length = 145044 Score = 153 bits (77), Expect = 6e-34 Identities = 119/133 (89%) Strand = Plus / Minus Query: 205 cagtgagtcattgataaccaagcgcttccctgtctcttgaacctcttgactaccaatcac 264 ||||| ||||| ||| | ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 70160 cagtgtgtcatcgatcatcaagctcttccatgtctcttgaacctcttgaccaacaatcat 70101 Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggtaaccgg 324 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 70100 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctggcaatagg 70041 Query: 325 gaccagattcagg 337 || |||||||||| Sbjct: 70040 gaacagattcagg 70028 Score = 119 bits (60), Expect = 8e-24 Identities = 112/128 (87%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 334 caggctgttatccaggcaaacattattggtcctctggtccatctcctgcaaggtgctgaa 393 |||||||| ||| | |||||||| |||| |||||| || ||||| |||||| ||||||| Sbjct: 69954 caggctgtgatcaatgcaaacataattgctcctctagtacatctgctgcaaactgctgaa 69895 Query: 394 tttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg-acacat 452 |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 69894 tttgacatcaagaaagaggctgcgtgggcaatctcaaatgccacttctggtggaacacat 69835 Query: 453 gatcagat 460 |||||||| Sbjct: 69834 gatcagat 69827 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 4 tctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgga 63 ||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| Sbjct: 71557 tctcaggacgaggaggtcctgactgatgcctgctgggctctttcttatttgtctgatgga 71498 Query: 64 actaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagctt 123 |||||||| ||||||||| ||||||| ||||| || || || || |||||||||| ||| Sbjct: 71497 actaatgataagatccaagctgtgatagaatcaggagtgttcccaaggcttgtggaactt 71438 Query: 124 ctc 126 ||| Sbjct: 71437 ctc 71435 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 133 ccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtcactggtgat 192 ||||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 71329 ccttcggcttcagtgctcattccagctttgcgcacggtgggtaacatcgtcactggggat 71270 Query: 193 gatttgcagactcag 207 || ||||||||||| Sbjct: 71269 gacatgcagactcag 71255
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 153 bits (77), Expect = 6e-34 Identities = 119/133 (89%) Strand = Plus / Minus Query: 205 cagtgagtcattgataaccaagcgcttccctgtctcttgaacctcttgactaccaatcac 264 ||||| ||||| ||| | ||||| ||||| |||||||||||||||||||| | |||||| Sbjct: 3192443 cagtgtgtcatcgatcatcaagctcttccatgtctcttgaacctcttgaccaacaatcat 3192384 Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggtaaccgg 324 ||||||||||||||||||||||||||||||||||||||||||||||| ||||| || || Sbjct: 3192383 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcactgctggcaatagg 3192324 Query: 325 gaccagattcagg 337 || |||||||||| Sbjct: 3192323 gaacagattcagg 3192311 Score = 119 bits (60), Expect = 8e-24 Identities = 112/128 (87%), Gaps = 1/128 (0%) Strand = Plus / Minus Query: 334 caggctgttatccaggcaaacattattggtcctctggtccatctcctgcaaggtgctgaa 393 |||||||| ||| | |||||||| |||| |||||| || ||||| |||||| ||||||| Sbjct: 3192237 caggctgtgatcaatgcaaacataattgctcctctagtacatctgctgcaaactgctgaa 3192178 Query: 394 tttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg-acacat 452 |||||||| ||||| ||||| || |||||||| |||||||||||||||||||| |||||| Sbjct: 3192177 tttgacatcaagaaagaggctgcgtgggcaatctcaaatgccacttctggtggaacacat 3192118 Query: 453 gatcagat 460 |||||||| Sbjct: 3192117 gatcagat 3192110 Score = 117 bits (59), Expect = 3e-23 Identities = 107/123 (86%) Strand = Plus / Minus Query: 4 tctcaggacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgga 63 ||||||||||||||||| || |||||||||||||||||||| || || ||||||||||| Sbjct: 3193840 tctcaggacgaggaggtcctgactgatgcctgctgggctctttcttatttgtctgatgga 3193781 Query: 64 actaatgacaagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagctt 123 |||||||| ||||||||| ||||||| ||||| || || || || |||||||||| ||| Sbjct: 3193780 actaatgataagatccaagctgtgatagaatcaggagtgttcccaaggcttgtggaactt 3193721 Query: 124 ctc 126 ||| Sbjct: 3193720 ctc 3193718 Score = 101 bits (51), Expect = 2e-18 Identities = 69/75 (92%) Strand = Plus / Minus Query: 133 ccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtcactggtgat 192 ||||||||||| || |||||||||||| |||||||||||||||||||||||||||| ||| Sbjct: 3193612 ccttcggcttcagtgctcattccagctttgcgcacggtgggtaacatcgtcactggggat 3193553 Query: 193 gatttgcagactcag 207 || ||||||||||| Sbjct: 3193552 gacatgcagactcag 3193538
>gb|AF369706.1| Capsicum annuum importin alpha 1 mRNA, complete cds Length = 1860 Score = 129 bits (65), Expect = 9e-27 Identities = 155/185 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||||||||||||||||||||||||||||||||||||| || || || ||||| ||||| Sbjct: 1070 aatcacaagaaaagcatcaagaaagaagcatgctggacaatatctaatatcactgctgga 1129 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctc 378 ||| | | ||| || |||||||| || ||||||| |||||| ||| ||||| || || Sbjct: 1130 aacagagcccaaatacaggctgtcattgaggcaaatattattcttccactggtacaccta 1189 Query: 379 ctgcaaggtgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccact 438 ||||| ||| |||||||||||||||||||||||||| ||||| || |||||||| || Sbjct: 1190 ttgcaaaatgcagaatttgacattaagaaggaggcagcatgggccatctcaaatgctacc 1249 Query: 439 tctgg 443 ||||| Sbjct: 1250 tctgg 1254
>gb|BT009251.1| Triticum aestivum clone wlk4.pk0006.e8:fis, full insert mRNA sequence Length = 1553 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 25 actgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatct 84 |||||||| ||||||||||| ||||| || |||||||| || |||||||||||||||||| Sbjct: 864 actgatgcatgctgggctctttcgtatctctctgatggcaccaatgacaagatccaatct 923 Query: 85 gtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 |||||||| |||| || | ||| |||||||||||||||||| Sbjct: 924 gtgattgatgctggtgtctgtccccggcttgtggagcttctc 965 Score = 87.7 bits (44), Expect = 3e-14 Identities = 134/164 (81%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||||||||||||||||||||||||| || ||||||||| | ||||| ||||| |||||| Sbjct: 1098 aatcacaagaaaagcatcaagaaagaggcctgctggactgtttcaaatatcactgctggt 1157 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctc 378 ||| || ||||| |||||||| || || |||||||| |||||||| ||||| Sbjct: 1158 aacaaagatcagatacaggctgtgattactgctgggattattggacctctggtgcatctg 1217 Query: 379 ctgcaaggtgctgaatttgacattaagaaggaggcagcttgggc 422 |||||| |||||||| || || ||||||||||| |||||||| Sbjct: 1218 ctgcaaacggctgaattcgatatcaagaaggaggctgcttgggc 1261
>ref|NM_183958.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1677 Score = 105 bits (53), Expect = 1e-19 Identities = 182/225 (80%) Strand = Plus / Plus Query: 222 ccaagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaa 281 |||||| ||||||||||| || || || ||||| || | ||| ||||||||| |||||| Sbjct: 975 ccaagcacttccctgtcttttcaatcttttgacaacaactcaaaagaaaagcgtcaagag 1034 Query: 282 agaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggctgt 341 |||||| |||||||| ||||| |||||||||||||| | || |||||||||||||| Sbjct: 1035 agaagcttgctggacaatctccaacatcacagctggaactaaagagcagattcaggctgt 1094 Query: 342 tatccaggcaaacattattggtcctctggtccatctcctgcaaggtgctgaatttgacat 401 ||| | ||||||| |||| |||||| | ||||| ||||| |||||| ||||| | Sbjct: 1095 gatcgattcaaacataattgctcctctattgcatctgttgcaacatgctgagtttgatgt 1154 Query: 402 taagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 || |||||||| | |||||||||||| |||||||| |||||||| Sbjct: 1155 caaaaaggaggctgtttgggcaatttctaatgccacatctggtgg 1199 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 37 tgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtgattgaatct 96 ||||| ||||| |||||||| ||||| |||||||||| || ||| ||||||||||| || Sbjct: 787 tgggcactctcttacctgtcagatggttctaatgacaatatacaagctgtgattgaaact 846 Query: 97 ggcgt 101 ||||| Sbjct: 847 ggcgt 851
>dbj|AK100070.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013169D11, full insert sequence Length = 2226 Score = 105 bits (53), Expect = 1e-19 Identities = 182/225 (80%) Strand = Plus / Plus Query: 222 ccaagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaa 281 |||||| ||||||||||| || || || ||||| || | ||| ||||||||| |||||| Sbjct: 1109 ccaagcacttccctgtcttttcaatcttttgacaacaactcaaaagaaaagcgtcaagag 1168 Query: 282 agaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggctgt 341 |||||| |||||||| ||||| |||||||||||||| | || |||||||||||||| Sbjct: 1169 agaagcttgctggacaatctccaacatcacagctggaactaaagagcagattcaggctgt 1228 Query: 342 tatccaggcaaacattattggtcctctggtccatctcctgcaaggtgctgaatttgacat 401 ||| | ||||||| |||| |||||| | ||||| ||||| |||||| ||||| | Sbjct: 1229 gatcgattcaaacataattgctcctctattgcatctgttgcaacatgctgagtttgatgt 1288 Query: 402 taagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 || |||||||| | |||||||||||| |||||||| |||||||| Sbjct: 1289 caaaaaggaggctgtttgggcaatttctaatgccacatctggtgg 1333 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 37 tgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtgattgaatct 96 ||||| ||||| |||||||| ||||| |||||||||| || ||| ||||||||||| || Sbjct: 921 tgggcactctcttacctgtcagatggttctaatgacaatatacaagctgtgattgaaact 980 Query: 97 ggcgt 101 ||||| Sbjct: 981 ggcgt 985
>gb|DQ252507.1| Solanum tuberosum clone 085H03 importin alpha 1-like mRNA, complete cds Length = 1618 Score = 105 bits (53), Expect = 1e-19 Identities = 152/185 (82%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 ||||||||||||||||||||||| |||||||| ||||| ||||| || ||||| ||||| Sbjct: 1038 aatcacaagaaaagcatcaagaaggaagcatgttggacaatctctaatatcactgctgga 1097 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctc 378 ||| | | ||| || ||||||||||| |||| || |||||| ||| |||| || || Sbjct: 1098 aacagagcccaaatacaggctgttattgaggcgaatattattcttcccatggtacaccta 1157 Query: 379 ctgcaaggtgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccact 438 ||||| ||| |||||||||||||||||||||||||| ||||| || || ||||| || Sbjct: 1158 ttgcaaaatgcagaatttgacattaagaaggaggcagcatgggctatctctaatgctacc 1217 Query: 439 tctgg 443 ||||| Sbjct: 1218 tctgg 1222
>ref|NM_187874.1| Oryza sativa (japonica cultivar-group), Ozsa8318 predicted mRNA Length = 1581 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 766 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 825 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 826 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 879 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 1012 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 1071 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggt 371 ||| || ||||| |||||||| || | || |||||||||||||||||| Sbjct: 1072 aacaaagatcagatacaggctgtcataaatgctggcattattggtcctctggt 1124
>gb|AF005265.1| Oryza sativa importin mRNA, complete cds Length = 2038 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 837 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 896 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 897 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 950 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 1083 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 1142 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggt 371 ||| || ||||| |||||||| || | || |||||||||||||||||| Sbjct: 1143 aacaaagatcagatacaggctgtcataaatgctggcattattggtcctctggt 1195
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 8383292 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 8383351 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 8383352 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 8383405 Score = 79.8 bits (40), Expect = 7e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 222 ccaagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaa 281 |||||| ||||||||||| || || || ||||| || | ||| ||||||||| |||||| Sbjct: 13548273 ccaagcacttccctgtcttttcaatcttttgacaacaactcaaaagaaaagcgtcaagag 13548332 Query: 282 agaagcatgctggactatctcaaacatcacagctgg 317 |||||| |||||||| ||||| |||||||||||||| Sbjct: 13548333 agaagcttgctggacaatctccaacatcacagctgg 13548368 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 8384535 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 8384594 Query: 319 aac 321 ||| Sbjct: 8384595 aac 8384597 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 37 tgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtgattgaatct 96 ||||| ||||| |||||||| ||||| |||||||||| || ||| ||||||||||| || Sbjct: 13546511 tgggcactctcttacctgtcagatggttctaatgacaatatacaagctgtgattgaaact 13546570 Query: 97 ggcgt 101 ||||| Sbjct: 13546571 ggcgt 13546575 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 406 aaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||| | |||||||||||| |||||||| |||||||| Sbjct: 13548629 aaggaggctgtttgggcaatttctaatgccacatctggtgg 13548669
>dbj|AP000816.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, clone:P0503G09 Length = 59843 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 47918 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 47977 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 47978 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 48031 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 49161 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 49220 Query: 319 aac 321 ||| Sbjct: 49221 aac 49223
>dbj|AK099336.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033020P11, full insert sequence Length = 2104 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 894 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 953 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 954 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 1007 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 1140 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 1199 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggt 371 ||| || ||||| |||||||| || | || |||||||||||||||||| Sbjct: 1200 aacaaagatcagatacaggctgtcataaatgctggcattattggtcctctggt 1252
>dbj|AK068233.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013149A11, full insert sequence Length = 2143 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 933 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 992 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 993 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 1046 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 1179 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 1238 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggt 371 ||| || ||||| |||||||| || | || |||||||||||||||||| Sbjct: 1239 aacaaagatcagatacaggctgtcataaatgctggcattattggtcctctggt 1291
>dbj|AB004814.1| Oryza sativa (japonica cultivar-group) DNA for NLS receptor, complete cds Length = 6530 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 3591 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 3650 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 3651 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 3704 Score = 69.9 bits (35), Expect = 7e-09 Identities = 56/63 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 4834 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 4893 Query: 319 aac 321 ||| Sbjct: 4894 aac 4896
>dbj|AB004660.1| Oryza sativa mRNA for NLS receptor, complete cds Length = 2090 Score = 91.7 bits (46), Expect = 2e-15 Identities = 97/114 (85%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||||| || || | |||||||| ||||||||| Sbjct: 871 gaggaagttctcactgatgcgtgctgggctctttcatatttatctgatggcactaatgac 930 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||||||| | ||||||||| |||| |||| || || ||||||||||||||| Sbjct: 931 aagatccaagccgtgattgaagctggtgtttgcccccgtcttgtggagcttctc 984 Score = 73.8 bits (37), Expect = 5e-10 Identities = 94/113 (83%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggt 318 |||| ||||||||||||||||||||| || ||||||||||| ||||| || || |||||| Sbjct: 1117 aatctcaagaaaagcatcaagaaagaggcttgctggactatttcaaatattactgctggt 1176 Query: 319 aaccgggaccagattcaggctgttatccaggcaaacattattggtcctctggt 371 ||| || ||||| |||||||| || | || |||||||||||||||||| Sbjct: 1177 aacaaagatcagatacaggctgtcataaatgctggcattattggtcctctggt 1229
>ref|NM_117708.1| Arabidopsis thaliana protein transporter AT4G16143 mRNA, complete cds Length = 2013 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1094 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 1153 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 1154 aaacagggaccagattcaggctgt 1177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 864 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 923 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 924 attgaggcaggtgttgttcctcgactcgtcgagcttctc 962 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 1254 tgggcaatatcaaatgccacttcaggtgg 1282
>gb|BT000157.1| Arabidopsis thaliana unknown protein (not annotated) mRNA, complete cds Length = 978 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 363 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 422 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 423 aaacagggaccagattcaggctgt 446 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 133 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 192 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 193 attgaggcaggtgttgttcctcgactcgtcgagcttctc 231 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 523 tgggcaatatcaaatgccacttcaggtgg 551
>emb|Y14615.1|ATIMPA2 Arabidopsis thaliana mRNA for importin alpha-like protein 2 Length = 1741 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1059 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 1118 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 1119 aaacagggaccagattcaggctgt 1142 Score = 54.0 bits (27), Expect = 4e-04 Identities = 81/99 (81%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| |||||||||| Sbjct: 829 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaagtccaatctgtc 888 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 889 attgaggcaggtgttgttcctcgactcgtcgagcttctc 927 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 1219 tgggcaatatcaaatgccacttcaggtgg 1247
>gb|AY136331.1| Arabidopsis thaliana unknown protein mRNA, complete cds Length = 1447 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 528 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 587 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 588 aaacagggaccagattcaggctgt 611 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 298 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 357 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 358 attgaggcaggtgttgttcctcgactcgtcgagcttctc 396 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 688 tgggcaatatcaaatgccacttcaggtgg 716
>gb|AF361811.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2014 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1094 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 1153 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 1154 aaacagggaccagattcaggctgt 1177 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 864 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 923 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 924 attgaggcaggtgttgttcctcgactcgtcgagcttctc 962 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 1254 tgggcaatatcaaatgccacttcaggtgg 1282
>gb|AY060529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1608 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1026 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 1085 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 1086 aaacagggaccagattcaggctgt 1109 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 796 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 855 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 856 attgaggcaggtgttgttcctcgactcgtcgagcttctc 894 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 1186 tgggcaatatcaaatgccacttcaggtgg 1214
>emb|BX826439.1|CNS0A43E Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB26ZF09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1938 Score = 87.7 bits (44), Expect = 3e-14 Identities = 74/84 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 1057 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 1116 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||||||||||||||||||| Sbjct: 1117 aaacagggaccagattcaggctgt 1140 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 827 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 886 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 887 attgaggcaggtgttgttcctcgactcgtcgagcttctc 925 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 1217 tgggcaatatcaaatgccacttcaggtgg 1245
>gb|AY108183.1| Zea mays PCO130036 mRNA sequence Length = 1271 Score = 81.8 bits (41), Expect = 2e-12 Identities = 104/125 (83%) Strand = Plus / Plus Query: 181 gtcactggtgatgatttgcagactcagtgagtcattgataaccaagcgcttccctgtctc 240 |||||||| ||||||||||| |||||||| | |||||| | ||||| |||||| | ||| Sbjct: 118 gtcactggagatgatttgcaaactcagtgtattattgatcatcaagctcttccccgcctc 177 Query: 241 ttgaacctcttgactaccaatcacaagaaaagcatcaagaaagaagcatgctggactatc 300 |||| || ||||| || |||||||||||||| |||||||| |||||||||||||| Sbjct: 178 atgaatctgttgacgcagaaccacaagaaaagcattaagaaagaggcatgctggactatt 237 Query: 301 tcaaa 305 ||||| Sbjct: 238 tcaaa 242 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 394 tttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 ||||| || ||||||||||| |||||||| || |||||||| || |||||||| Sbjct: 331 tttgatatcaagaaggaggctgcttgggccatctcaaatgctacctctggtgg 383
>gb|AY103576.1| Zea mays PCO130039 mRNA sequence Length = 2710 Score = 81.8 bits (41), Expect = 2e-12 Identities = 230/293 (78%) Strand = Plus / Plus Query: 13 gaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgac 72 ||||| || ||||||||||| ||||||||| | || ||| | ||||| || |||||||| Sbjct: 916 gaggaagttctcactgatgcatgctgggctttgtcatacttatctgacggcactaatgat 975 Query: 73 aagatccaatctgtgattgaatctggcgtttttcctcggcttgtggagcttctcttgcac 132 ||||||||| |||| |||||| |||| |||| || |||||||||||||| || | || Sbjct: 976 aagatccaagctgtaattgaagctggtgtttgcccccggcttgtggagctccttctccat 1035 Query: 133 ccttcggcttctgttctcattccagctctgcgcacggtgggtaacatcgtcactggtgat 192 || || | || || || || || ||||| || || || || ||||| || ||||| ||| Sbjct: 1036 ccatcaccgtcggtgcttatacctgctctacgaactgttgggaacattgtaactggagat 1095 Query: 193 gatttgcagactcagtgagtcattgataaccaagcgcttccctgtctcttgaacctcttg 252 ||| ||| |||||||| |||||||| | ||||| |||||| | ||| |||| | ||| Sbjct: 1096 gatcagcaaactcagtgtatcattgatcatcaagctcttccccgcctcctgaatttattg 1155 Query: 253 actaccaatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaa 305 || || |||||||||||||| |||||||| ||||||||||| || ||||| Sbjct: 1156 acacagaaccacaagaaaagcattaagaaagaggcatgctggacgatttcaaa 1208 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 394 tttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 ||||| || ||||||||||| |||||||| || ||||| || || |||||||| Sbjct: 1297 tttgatatcaagaaggaggctgcttgggccatctcaaacgctacctctggtgg 1349
>ref|NM_180193.1| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.2 mRNA, complete cds Length = 2256 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1311 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1370 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1189 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1238
>ref|NM_111552.3| Arabidopsis thaliana AT-IMP; protein transporter AT3G06720 (AT-IMP) transcript variant AT3G06720.1 mRNA, complete cds Length = 2330 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1375 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1434 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1253 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1302
>gb|AC023912.5|ATAC023912 Arabidopsis thaliana chromosome III BAC F3E22 genomic sequence, complete sequence Length = 63767 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Minus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 43446 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 43387 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 43669 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 43620
>emb|Z97340.2|ATFCA5 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 5 Length = 209164 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 101951 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 101892 Query: 318 taaccgggaccagattcagg 337 ||| ||||||||||||||| Sbjct: 101891 aaacagggaccagattcagg 101872 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 102626 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 102567 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 102566 attgaggcaggtgttgttcctcgactcgtcgagcttctc 102528 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 101636 tgggcaatatcaaatgccacttcaggtgg 101608
>emb|Y15224.1|ATIMPA1 Arabidopsis thaliana mRNA for importin alpha-like protein Impa1 Length = 1876 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1198 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1257 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1076 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1125
>emb|AL161543.2|ATCHRIV43 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 43 Length = 198226 Score = 79.8 bits (40), Expect = 7e-12 Identities = 70/80 (87%) Strand = Plus / Minus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||| ||||| |||||||| || ||||| |||||||| |||||||| ||||| ||||| Sbjct: 70941 caatcataagaagagcatcaaaaaggaagcttgctggacaatctcaaatatcactgctgg 70882 Query: 318 taaccgggaccagattcagg 337 ||| ||||||||||||||| Sbjct: 70881 aaacagggaccagattcagg 70862 Score = 61.9 bits (31), Expect = 2e-06 Identities = 82/99 (82%) Strand = Plus / Minus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| || ||||||||||| ||||| || ||||| || |||||||| ||||||||||| Sbjct: 71616 gatgcatgttgggctctctcttacctttccgatggcacaaatgacaaaatccaatctgtc 71557 Query: 88 attgaatctggcgtttttcctcggcttgtggagcttctc 126 ||||| | || ||| ||||||| || || ||||||||| Sbjct: 71556 attgaggcaggtgttgttcctcgactcgtcgagcttctc 71518 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 418 tgggcaatttcaaatgccacttctggtgg 446 |||||||| |||||||||||||| ||||| Sbjct: 70626 tgggcaatatcaaatgccacttcaggtgg 70598
>gb|AY125529.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 1599 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1140 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1199 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1018 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1067
>gb|AY094390.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2001 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1201 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1260 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1079 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1128
>gb|AY054164.1| Arabidopsis thaliana AT3g06720/F3E22_14 mRNA, complete cds Length = 2134 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1311 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1370 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1189 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1238
>gb|U69533.2|ATU69533 Arabidopsis thaliana AtKAP alpha mRNA, complete cds Length = 1940 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1140 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1199 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1018 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1067
>dbj|AP003329.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1045F02 Length = 215378 Score = 79.8 bits (40), Expect = 7e-12 Identities = 82/96 (85%) Strand = Plus / Plus Query: 222 ccaagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaa 281 |||||| ||||||||||| || || || ||||| || | ||| ||||||||| |||||| Sbjct: 102233 ccaagcacttccctgtcttttcaatcttttgacaacaactcaaaagaaaagcgtcaagag 102292 Query: 282 agaagcatgctggactatctcaaacatcacagctgg 317 |||||| |||||||| ||||| |||||||||||||| Sbjct: 102293 agaagcttgctggacaatctccaacatcacagctgg 102328 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 37 tgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtgattgaatct 96 ||||| ||||| |||||||| ||||| |||||||||| || ||| ||||||||||| || Sbjct: 100471 tgggcactctcttacctgtcagatggttctaatgacaatatacaagctgtgattgaaact 100530 Query: 97 ggcgt 101 ||||| Sbjct: 100531 ggcgt 100535 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 406 aaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||| | |||||||||||| |||||||| |||||||| Sbjct: 102589 aaggaggctgtttgggcaatttctaatgccacatctggtgg 102629
>gb|AY088732.1| Arabidopsis thaliana clone 9351 mRNA, complete sequence Length = 2203 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1377 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1436 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1255 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1304
>gb|AF077528.1|AF077528 Arabidopsis thaliana importin alpha mRNA, complete cds Length = 1939 Score = 79.8 bits (40), Expect = 7e-12 Identities = 55/60 (91%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || || ||||||||||||||||| ||||| ||||| Sbjct: 1188 tgctgaatttgacattaagaaggaagctgcatgggcaatttcaaatgcaacttcaggtgg 1247 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1066 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1115
>gb|AF369707.1| Capsicum annuum importin alpha 2 mRNA, complete cds Length = 2096 Score = 71.9 bits (36), Expect = 2e-09 Identities = 72/84 (85%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||| |||||||||||||| || ||||||||||| ||||| || || ||||| Sbjct: 1037 caatcacaagaagagcatcaagaaagaggcctgctggactatatcaaatattactgctgg 1096 Query: 318 taaccgggaccagattcaggctgt 341 ||| ||| ||||| |||||||| Sbjct: 1097 gaacaaggaacagatacaggctgt 1120
>ref|NM_116447.1| Arabidopsis thaliana ATIMPALPHA3/MOS6; protein transporter AT4G02150 (ATIMPALPHA3/MOS6) mRNA, complete cds Length = 1918 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 1072 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 1131 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1132 gaagcttgctggactatctccaacattacagctgg 1166 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1264 gcttggggaatatcaaatgctacttctggtgg 1295
>emb|Y09511.1|ATKAPAPRO A.thaliana mRNA for Kap alpha protein Length = 1978 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 1064 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 1123 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1124 gaagcttgctggactatctccaacattacagctgg 1158 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1256 gcttggggaatatcaaatgctacttctggtgg 1287
>emb|AL161493.2|ATCHRIV5 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 5 Length = 198220 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 180545 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 180486 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 180485 gaagcttgctggactatctccaacattacagctgg 180451 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 180263 gcttggggaatatcaaatgctacttctggtgg 180232
>dbj|AB236757.1| Trifolium pratense RNA for putative importin alpha, complete cds, clone: C1528 Length = 1848 Score = 69.9 bits (35), Expect = 7e-09 Identities = 137/171 (80%) Strand = Plus / Plus Query: 25 actgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatct 84 ||||||||||||||||| || || || || |||||||| || ||||| || || ||| || Sbjct: 881 actgatgcctgctgggccctttcatatctttctgatggtacaaatgataaaattcaagct 940 Query: 85 gtgattgaatctggcgtttttcctcggcttgtggagcttctcttgcacccttcggcttct 144 || |||||| |||| |||| |||||| || || |||||||| ||||||| || |||| Sbjct: 941 gtaattgaagctggtgtttgtcctcgactggttgagcttctactgcacccatctccttca 1000 Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatgat 195 || || ||||| ||||| || || || || ||||| |||||||| |||||| Sbjct: 1001 gtgctaattcctgctcttcgtactgttggaaacattgtcactggagatgat 1051 Score = 65.9 bits (33), Expect = 1e-07 Identities = 54/61 (88%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||| |||||||| ||||| |||||||| || |||||||| || |||||||| Sbjct: 1243 tgctgaatttgatattaagaaagaggctgcttgggctatctcaaatgctacatctggtgg 1302 Query: 447 a 447 | Sbjct: 1303 a 1303 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 268 aaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||||| ||||| || ||||| || |||||||| |||||||| Sbjct: 1124 aaaagcatcaagaaggaagcttgttggaccatatcaaacattacagctgg 1173
>gb|AY081725.1| Arabidopsis thaliana AT4g02150/T10M13_16 mRNA, complete cds Length = 1596 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 985 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 1044 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1045 gaagcttgctggactatctccaacattacagctgg 1079 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1177 gcttggggaatatcaaatgctacttctggtgg 1208
>gb|DQ087970.1| Arabidopsis thaliana putative importin alpha subunit (MOS6) mRNA, complete cds Length = 1596 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 985 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 1044 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1045 gaagcttgctggactatctccaacattacagctgg 1079 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1177 gcttggggaatatcaaatgctacttctggtgg 1208
>gb|AF385693.1|AF385693 Arabidopsis thaliana AT4g02150/T10M13_16 mRNA, complete cds Length = 1918 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 1072 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 1131 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 1132 gaagcttgctggactatctccaacattacagctgg 1166 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1264 gcttggggaatatcaaatgctacttctggtgg 1295
>gb|AF001308.1|ATAF001308 Arabidopsis thaliana BAC T10M13 from chromosome IV, from 10.8 cM to 11.6 cM, complete sequence Length = 105654 Score = 69.9 bits (35), Expect = 7e-09 Identities = 80/95 (84%) Strand = Plus / Minus Query: 223 caagcgcttccctgtctcttgaacctcttgactaccaatcacaagaaaagcatcaagaaa 282 ||||||||||| ||||| |||||||| | | | |||| ||||||| || |||||||| Sbjct: 77941 caagcgcttccttgtcttttgaaccttctaaaaaacaattacaagaagagtatcaagaag 77882 Query: 283 gaagcatgctggactatctcaaacatcacagctgg 317 ||||| |||||||||||||| ||||| |||||||| Sbjct: 77881 gaagcttgctggactatctccaacattacagctgg 77847 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Minus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 77659 gcttggggaatatcaaatgctacttctggtgg 77628
>gb|BT014529.1| Lycopersicon esculentum clone 133943R, mRNA sequence Length = 1946 Score = 65.9 bits (33), Expect = 1e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggtaacc 322 |||| |||||||| || || ||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 1091 acaaaaaaagcattaaaaaggaagcttgttggacaatctcgaacattacagctggtaata 1150 Query: 323 gggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctcctgc 382 | | || |||||| ||| ||| |||| |||||||| ||||| || |||| || | Sbjct: 1151 gaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctac 1210 Query: 383 aaggtgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctg 442 || |||||||||||| || ||||| ||||| |||||||||||||||||||| || || | Sbjct: 1211 aaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccg 1270 Query: 443 gtgga 447 ||||| Sbjct: 1271 gtgga 1275 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| ||||||||||| || || || |||||||||||||||||||| ||||| |||| Sbjct: 856 gatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgtt 915 Query: 88 attgaatctgg 98 |||||| |||| Sbjct: 916 attgaagctgg 926
>gb|AC150843.16| Medicago truncatula clone mth2-103p8, complete sequence Length = 125707 Score = 65.9 bits (33), Expect = 1e-07 Identities = 48/53 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||||||||||||| ||||| |||||||| || |||||||| |||||||| Sbjct: 69089 aagaaaagcatcaagaaggaagcttgctggaccatatcaaacattacagctgg 69141 Score = 52.0 bits (26), Expect = 0.002 Identities = 92/114 (80%) Strand = Plus / Plus Query: 334 caggctgttatccaggcaaacattattggtcctctggtccatctcctgcaaggtgctgaa 393 |||||||| ||| |||| || || ||||||||||||| ||| || ||| |||||| Sbjct: 69261 caggctgtgatcgaggccaatatatttggtcctctggtgagtctgcttcaaaatgctgag 69320 Query: 394 tttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgga 447 ||||| || ||||| ||||| |||||||| ||||| ||||| || ||||||||| Sbjct: 69321 tttgatatcaagaaagaggctgcttgggctatttctaatgctacatctggtgga 69374 Score = 50.1 bits (25), Expect = 0.007 Identities = 82/101 (81%) Strand = Plus / Plus Query: 25 actgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatct 84 ||||||||||||||||| || || || || |||||||| || || || || || ||| || Sbjct: 67792 actgatgcctgctgggcactatcatatctttctgatggtacaaacgataaaattcaagct 67851 Query: 85 gtgattgaatctggcgtttttcctcggcttgtggagcttct 125 || |||||| |||| |||| ||| || ||||| |||||||| Sbjct: 67852 gtaattgaagctggtgtttgtccccgacttgttgagcttct 67892 Score = 42.1 bits (21), Expect = 1.6 Identities = 30/33 (90%) Strand = Plus / Plus Query: 175 aacatcgtcactggtgatgatttgcagactcag 207 ||||| |||||||| ||||||||||| |||||| Sbjct: 68054 aacattgtcactggagatgatttgcaaactcag 68086
>gb|AF017252.1|AF017252 Lycopersicon esculentum importin alpha (LeKAP alpha) mRNA, complete cds Length = 1907 Score = 65.9 bits (33), Expect = 1e-07 Identities = 147/185 (79%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggtaacc 322 |||| |||||||| || || ||||| || ||||| ||||| ||||| ||||||||||| Sbjct: 1019 acaaaaaaagcattaaaaaggaagcttgttggacaatctcgaacattacagctggtaata 1078 Query: 323 gggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctcctgc 382 | | || |||||| ||| ||| |||| |||||||| ||||| || |||| || | Sbjct: 1079 gaaatcaaattcagattgtgatcgaggctggcattattgcccctcttgtatatctgctac 1138 Query: 383 aaggtgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctg 442 || |||||||||||| || ||||| ||||| |||||||||||||||||||| || || | Sbjct: 1139 aaaatgctgaatttgagataaagaaagaggctgcttgggcaatttcaaatgctacgtccg 1198 Query: 443 gtgga 447 ||||| Sbjct: 1199 gtgga 1203 Score = 61.9 bits (31), Expect = 2e-06 Identities = 61/71 (85%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaatctgtg 87 ||||| ||||||||||| || || || |||||||||||||||||||| ||||| |||| Sbjct: 784 gatgcatgctgggctctttcatatctttctgatggaactaatgacaaaatccaggctgtt 843 Query: 88 attgaatctgg 98 |||||| |||| Sbjct: 844 attgaagctgg 854
>emb|Y15225.1|ATIMPA3 Arabidopsis thaliana mRNA for importin alpha-like protein Impa3 Length = 1887 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 258 caatcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||| ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1048 caattacaagaagagtatcaagaaggaagcttgctggactatctccaacattacagctgg 1107 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 415 gcttgggcaatttcaaatgccacttctggtgg 446 ||||||| ||| |||||||| ||||||||||| Sbjct: 1205 gcttggggaatatcaaatgctacttctggtgg 1236
>gb|L81172.1|L81172 Arabidopsis thaliana importin alpha homolog mRNA, complete cds Length = 1956 Score = 63.9 bits (32), Expect = 4e-07 Identities = 54/60 (90%), Gaps = 1/60 (1%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||||||||||||||||||| || | ||||||||||||||||| ||||| ||||| Sbjct: 1206 tgctgaatttgacattaagaaggaagc-tcatgggcaatttcaaatgcaacttcaggtgg 1264 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Plus Query: 265 aagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagc 314 ||||||||||| ||||| ||||| |||||||| || |||||||||||||| Sbjct: 1084 aagaaaagcataaagaaggaagcttgctggacgatttcaaacatcacagc 1133
>ref|NM_100149.3| Arabidopsis thaliana protein transporter AT1G02690 transcript variant AT1G02690.1 mRNA, complete cds Length = 1937 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1165 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 1219 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 1292 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 1348
>ref|NM_202014.1| Arabidopsis thaliana protein transporter AT1G02690 transcript variant AT1G02690.2 mRNA, complete cds Length = 1940 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1168 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 1222 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 1295 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 1351
>gb|AY096437.1| Arabidopsis thaliana putative importin alpha protein (At1g02690) mRNA, complete cds Length = 1648 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1028 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 1082 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 1155 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 1211
>gb|AY070068.1| Arabidopsis thaliana putative importin alpha protein (At1g02690) mRNA, complete cds Length = 1953 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1165 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 1219 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 1292 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 1348
>emb|BX814638.1|CNS0ABXV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB85ZG10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1832 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Plus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 1131 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 1185 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Plus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 1258 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 1314
>gb|AC022521.4|AC022521 Arabidopsis thaliana chromosome I BAC T14P4 genomic sequence, complete sequence Length = 121668 Score = 61.9 bits (31), Expect = 2e-06 Identities = 49/55 (89%) Strand = Plus / Minus Query: 263 acaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||| || |||||||| ||||| |||||||||||||| ||||| |||||||| Sbjct: 31591 acaagaagagtatcaagaaggaagcttgctggactatctctaacattacagctgg 31537 Score = 42.1 bits (21), Expect = 1.6 Identities = 48/57 (84%) Strand = Plus / Minus Query: 390 tgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||| || |||||||| || || | ||||||||| || ||||| ||||||||||| Sbjct: 31346 tgaattcgaaattaagaaagaagctgtttgggcaatctctaatgcaacttctggtgg 31290
>gb|AC157376.2| Medicago truncatula chromosome 7 BAC clone mth2-70d8, complete sequence Length = 87346 Score = 60.0 bits (30), Expect = 7e-06 Identities = 45/50 (90%) Strand = Plus / Minus Query: 268 aaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||||| ||||| |||||||| || || |||||||||||||| Sbjct: 16670 aaaagcatcaagaaggaagcttgctggacaatatcgaacatcacagctgg 16621
>ref|NM_001035934.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.3 mRNA, complete cds Length = 2475 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 878 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 937 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 938 attcaggctgtgattga 954 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1121 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1164 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1007 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1056
>ref|NM_179292.1| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.2 mRNA, complete cds Length = 2404 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 888 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 947 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 948 attcaggctgtgattga 964 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1131 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1174 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1017 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1066
>ref|NM_100797.4| Arabidopsis thaliana protein transporter AT1G09270 transcript variant AT1G09270.1 mRNA, complete cds Length = 2710 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 888 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 947 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 948 attcaggctgtgattga 964 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1131 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1174 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1017 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1066
>ref|XM_618107.2| PREDICTED: Bos taurus similar to Importin alpha-6 subunit (Karyopherin alpha-5 subunit) (LOC537919), mRNA Length = 1251 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | ||||||||||| ||||| ||| | | |||||||||||| Sbjct: 700 aaagaagcctgctggactgtttcaaacatcactgctggaaacagagctcagattcaggct 759 Query: 340 gttat 344 ||||| Sbjct: 760 gttat 764
>gb|AC151805.20| Medicago truncatula clone mth2-59n17, complete sequence Length = 143937 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Minus Query: 261 tcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||| || |||||||||| ||||||||| | |||||||| |||||||| Sbjct: 24959 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctgg 24903 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Minus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||| || ||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct: 25455 gatgcatggtgggcactctcgtatctttctgatggaacaaatgacaatatccaa 25402
>gb|AC170084.13| Medicago truncatula clone mth2-156k10, complete sequence Length = 143943 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 261 tcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||| || |||||||||| ||||||||| | |||||||| |||||||| Sbjct: 118985 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctgg 119041 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||| || ||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct: 118489 gatgcatggtgggcactctcgtatctttctgatggaacaaatgacaatatccaa 118542
>gb|BT013674.1| Lycopersicon esculentum clone 132494R, mRNA sequence Length = 2002 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 406 aaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||| || |||||||||||||||||||| |||||||| Sbjct: 1225 aaggaggctgcatgggcaatttcaaatgccacatctggtgg 1265
>ref|XM_387317.1| Gibberella zeae PH-1 chromosome 4 hypothetical protein (FG07141.1) partial mRNA Length = 1659 Score = 58.0 bits (29), Expect = 3e-05 Identities = 47/53 (88%) Strand = Plus / Plus Query: 10 gacgaggaggtgctcactgatgcctgctgggctctctcgtacctgtctgatgg 62 ||||| ||||| || | |||||||||||||||| |||||||||| |||||||| Sbjct: 790 gacgacgaggttctgattgatgcctgctgggctatctcgtacctttctgatgg 842 Score = 40.1 bits (20), Expect = 6.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 172 ggtaacatcgtcactggtgatgatttgcagac 203 |||||||| ||||||||||| ||| ||||||| Sbjct: 952 ggtaacattgtcactggtgacgatgtgcagac 983
>gb|AY050888.1| Arabidopsis thaliana At1g09270 mRNA sequence Length = 2406 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 927 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 986 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 987 attcaggctgtgattga 1003 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1417 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1460 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1303 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1352
>emb|Y14616.1|ATIMPA4 Arabidopsis thaliana partial mRNA for importin alpha-like protein 4 Length = 1778 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 763 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 822 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 823 attcaggctgtgattga 839 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1003 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1046 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 892 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 941
>gb|AY117313.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 1648 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 790 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 849 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 850 attcaggctgtgattga 866 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1033 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1076 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 919 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 968
>gb|AY090944.1| Arabidopsis thaliana putative importin alpha protein (At1g09270) mRNA, complete cds Length = 2001 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 888 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 947 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 948 attcaggctgtgattga 964 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1131 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1174 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1017 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1066
>gb|AC151459.30| Medicago truncatula clone mth2-6e6, complete sequence Length = 129518 Score = 58.0 bits (29), Expect = 3e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 261 tcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||| || |||||||||| ||||||||| | |||||||| |||||||| Sbjct: 17463 tcacaagaaaagtattaagaaagaagtttgctggactgtgtcaaacattacagctgg 17519 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||| || ||||| |||||||| || ||||||||||| |||||||| |||||| Sbjct: 16967 gatgcatggtgggcactctcgtatctttctgatggaacaaatgacaatatccaa 17020
>gb|AF367284.1|AF367284 Arabidopsis thaliana At1g09270/T12M4_2 mRNA, partial cds Length = 1126 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 878 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 937 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 938 attcaggctgtgattga 954 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 1007 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1056
>emb|BX815301.1|CNS0AALB Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS50ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1954 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Plus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 848 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 907 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 908 attcaggctgtgattga 924 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Plus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 1091 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 1134 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Plus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 977 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 1026
>gb|AC069144.9|AC069144 Arabidopsis thaliana chromosome 1 BAC F14C21 genomic sequence, complete sequence Length = 102135 Score = 58.0 bits (29), Expect = 3e-05 Identities = 38/41 (92%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaattt 427 ||||||||||||||||||||| || ||||| |||||||||| Sbjct: 11860 tgctgaatttgacattaagaaagaagcagcatgggcaattt 11900
>gb|AC003114.1|T12M4 Arabidopsis thaliana chromosome 1 BAC T12M4 sequence, complete sequence Length = 59261 Score = 58.0 bits (29), Expect = 3e-05 Identities = 65/77 (84%) Strand = Plus / Minus Query: 16 gaggtgctcactgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaag 75 ||||| ||||||||||| |||||||||||||| ||||| || ||||| | ||||| ||| Sbjct: 5971 gaggttctcactgatgcttgctgggctctctcctacctttcagatggccccaatgataag 5912 Query: 76 atccaatctgtgattga 92 || || |||||||||| Sbjct: 5911 attcaggctgtgattga 5895 Score = 48.1 bits (24), Expect = 0.026 Identities = 39/44 (88%) Strand = Plus / Minus Query: 259 aatcacaagaaaagcatcaagaaagaagcatgctggactatctc 302 |||||||||||||| || || |||||||| || ||||||||||| Sbjct: 5397 aatcacaagaaaagtataaaaaaagaagcttgttggactatctc 5354 Score = 44.1 bits (22), Expect = 0.40 Identities = 43/50 (86%) Strand = Plus / Minus Query: 145 gttctcattccagctctgcgcacggtgggtaacatcgtcactggtgatga 194 ||||||||||| ||||| || || || || |||||||| ||||||||||| Sbjct: 5595 gttctcattcctgctcttcgaactgttgggaacatcgtaactggtgatga 5546
>gb|AC133464.11| Mus musculus chromosome 16, clone RP24-459O21, complete sequence Length = 142742 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Minus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 6067 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 6012
>ref|NM_008465.2| Mus musculus karyopherin (importin) alpha 1 (Kpna1), mRNA Length = 4023 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 967 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1022
>gb|AY351984.1| Rattus norvegicus karyopherin alpha 1/importin alpha 5 (Kpna1) mRNA, complete cds Length = 4975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 885 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 940 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct: 1130 atcaaaaaagaagcatgttggacaatctctaatattacagctgg 1173
>dbj|AK154800.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107C09 product:karyopherin (importin) alpha 1, full insert sequence Length = 5009 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 984 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1039
>dbj|AK169348.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920190E13 product:karyopherin (importin) alpha 1, full insert sequence Length = 3899 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 989 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1044
>dbj|AK169311.1| Mus musculus 16 days embryo heart cDNA, RIKEN full-length enriched library, clone:I920182H01 product:karyopherin (importin) alpha 1, full insert sequence Length = 3899 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 989 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1044
>dbj|AK028307.1| Mus musculus adult male brain cDNA, RIKEN full-length enriched library, clone:3526401G09 product:karyopherin (importin) alpha 1, full insert sequence Length = 3118 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 985 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1040
>dbj|AK028259.1| Mus musculus 12 days embryo head cDNA, RIKEN full-length enriched library, clone:3010020J22 product:karyopherin (importin) alpha 1, full insert sequence Length = 4023 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 967 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1022
>gb|AY779025.1| Rattus norvegicus karyopherin alpha 1 (Kpna1) mRNA, complete cds Length = 1644 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 816 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 871 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct: 1061 atcaaaaaagaagcatgttggacaatctctaatattacagctgg 1104
>gb|BC006771.1| Mus musculus karyopherin (importin) alpha 1, mRNA (cDNA clone MGC:6726 IMAGE:3588534), complete cds Length = 2667 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 951 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1006
>emb|CT573031.6| Mouse DNA sequence from clone RP24-244H14 on chromosome 16, complete sequence Length = 170444 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 13375 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 13430
>gb|U34228.1|MMU34228 Mus musculus SRP1 mRNA, complete cds Length = 1710 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 815 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 870
>ref|NM_198726.1| Rattus norvegicus karyopherin (importin) alpha 1 (Kpna1), mRNA Length = 4975 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 885 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 940 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||| ||||||||||| ||||| ||||| || || |||||||| Sbjct: 1130 atcaaaaaagaagcatgttggacaatctctaatattacagctgg 1173
>gb|U20619.1|MMU20619 Mus musculus serine-rich RNA polymerase suppressor protein 1 (SRP1) mRNA, complete sequence Length = 3882 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatccaa 81 ||||||| |||||||||||||| |||||||| |||||| | ||||| || |||||| Sbjct: 971 ctgatgcttgctgggctctctcatacctgtcagatggacccaatgataaaatccaa 1026
>gb|BT013664.1| Lycopersicon esculentum clone 132483R, mRNA sequence Length = 2159 Score = 52.0 bits (26), Expect = 0.002 Identities = 146/186 (78%) Strand = Plus / Plus Query: 261 tcacaagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctggtaa 320 |||||| || |||||||||||||| || || |||||||| ||||| || || ||||| || Sbjct: 1094 tcacaaaaagagcatcaagaaagaggcctgttggactatatcaaatattactgctgggaa 1153 Query: 321 ccgggaccagattcaggctgttatccaggcaaacattattggtcctctggtccatctcct 380 | ||| ||||| |||||||| || |||| | ||| ||||||||||| || | || Sbjct: 1154 caaggaacagatacaggctgtgattgaggctggattaattagtcctctggtcaatttgct 1213 Query: 381 gcaaggtgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgccacttc 440 ||| ||| || |||||||| || || ||||| || ||||| ||||||||||| ||||| Sbjct: 1214 tcaaactgcagagtttgacatcaaaaaagaggctgcctgggctatttcaaatgctacttc 1273 Query: 441 tggtgg 446 ||||| Sbjct: 1274 cggtgg 1279
>gb|AC122160.21| Medicago truncatula clone mth2-23d6, complete sequence Length = 125105 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 264 caagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||||| || ||||||||||| ||| ||||| | |||||||| |||||||| Sbjct: 60507 caagaaaagtattaagaaagaagcttgcaggactttgtcaaacattacagctgg 60560
>gb|AC159537.24| Medicago truncatula clone mth2-188k3, complete sequence Length = 119507 Score = 52.0 bits (26), Expect = 0.002 Identities = 47/54 (87%) Strand = Plus / Plus Query: 264 caagaaaagcatcaagaaagaagcatgctggactatctcaaacatcacagctgg 317 ||||||||| || ||||||||||| ||| ||||| | |||||||| |||||||| Sbjct: 42767 caagaaaagtattaagaaagaagcttgcaggactttgtcaaacattacagctgg 42820
>gb|BC004833.1| Mus musculus karyopherin (importin) alpha 6, mRNA (cDNA clone MGC:6524 IMAGE:2651272), complete cds Length = 2142 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 814 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 866
>ref|XM_535761.2| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 1 (LOC478585), mRNA Length = 3560 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaa 74 |||||||||||||||| ||||| || ||||| ||||| |||||||||| Sbjct: 972 ctgatgcctgctgggccctctcatatctgtcagatggccctaatgacaa 1020
>ref|XM_852469.1| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 3 (LOC478585), mRNA Length = 2659 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaa 74 |||||||||||||||| ||||| || ||||| ||||| |||||||||| Sbjct: 814 ctgatgcctgctgggccctctcatatctgtcagatggccctaatgacaa 862
>ref|XM_852429.1| PREDICTED: Canis familiaris similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1), transcript variant 2 (LOC478585), mRNA Length = 3546 Score = 50.1 bits (25), Expect = 0.007 Identities = 43/49 (87%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaa 74 |||||||||||||||| ||||| || ||||| ||||| |||||||||| Sbjct: 958 ctgatgcctgctgggccctctcatatctgtcagatggccctaatgacaa 1006
>emb|CT010260.1| Mus musculus full open reading frame cDNA clone RZPDo836E1151D for gene Kpna6, Karyopherin (importin) alpha 6; complete cds, incl. stopcodon Length = 1602 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 802 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 854
>emb|CR450812.5| Zebrafish DNA sequence from clone CH211-161H7, complete sequence Length = 154456 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 277 aagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 16583 aagaaagaagcatgttggaccatctccaatatcacagctgg 16623 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||||| ||||||||||| || || ||||||||||| | ||||| |||||||| Sbjct: 15179 ctgatgcatgctgggctctttcttatctgtctgatggtcccaatgagaagatcca 15233
>ref|XM_696267.1| PREDICTED: Danio rerio similar to Importin alpha-1 subunit (Karyopherin alpha-1 subunit) (SRP1-beta) (RAG cohort protein 2) (Nucleoprotein interactor 1) (NPI-1) (LOC572542), partial mRNA Length = 580 Score = 50.1 bits (25), Expect = 0.007 Identities = 37/41 (90%) Strand = Plus / Plus Query: 277 aagaaagaagcatgctggactatctcaaacatcacagctgg 317 |||||||||||||| ||||| ||||| || ||||||||||| Sbjct: 217 aagaaagaagcatgttggaccatctccaatatcacagctgg 257
>gb|AF421152.1|AF421152 Sus scrofa karyopherin alpha 5 mRNA, partial cds Length = 601 Score = 50.1 bits (25), Expect = 0.007 Identities = 55/65 (84%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | ||||||||||| ||||| || | | |||||||||||| Sbjct: 500 aaagaagcctgctggactgtttcaaacatcactgctggaaatagagctcagattcaggct 559 Query: 340 gttat 344 ||||| Sbjct: 560 gttat 564
>dbj|AK046371.1| Mus musculus adult male corpora quadrigemina cDNA, RIKEN full-length enriched library, clone:B230377C12 product:karyopherin (importin) alpha 6, full insert sequence Length = 2209 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 857 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 909
>dbj|AK084212.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230009G09 product:karyopherin (importin) alpha 6, full insert sequence Length = 2165 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 856 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 908
>gb|AY779030.1| Rattus norvegicus karyopherin alpha 6 (Kpna6) mRNA, complete cds Length = 1611 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 804 gatgcttgctgggccctctcttacctgtctgatggccccaatgagaagatcca 856
>gb|BC105813.1| Rattus norvegicus karyopherin (importin) alpha 6, mRNA (cDNA clone MGC:124892 IMAGE:7112648), complete cds Length = 2181 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 854 gatgcttgctgggccctctcttacctgtctgatggccccaatgagaagatcca 906
>gb|AF020773.1|AF020773 Mus musculus importin alpha S2 mRNA, complete cds Length = 1602 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 802 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 854
>ref|NM_001015029.2| Rattus norvegicus karyopherin (importin) alpha 6 (Kpna6), mRNA Length = 2181 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 854 gatgcttgctgggccctctcttacctgtctgatggccccaatgagaagatcca 906
>emb|AL671759.10| Mouse DNA sequence from clone RP23-151A15 on chromosome 4, complete sequence Length = 141790 Score = 50.1 bits (25), Expect = 0.007 Identities = 46/53 (86%) Strand = Plus / Minus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| ||||| |||||||||||||| | ||||| |||||||| Sbjct: 83919 gatgcttgctgggccctctcctacctgtctgatggccccaatgagaagatcca 83867
>ref|XM_683707.1| PREDICTED: Danio rerio similar to Importin alpha-7 subunit (Karyopherin alpha-6 subunit) (Importin alpha S2) (LOC560310), mRNA Length = 1560 Score = 46.1 bits (23), Expect = 0.10 Identities = 47/55 (85%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 |||||||||| ||||||||||| || || |||||||| | ||||| |||||||| Sbjct: 491 ctgatgcctgttgggctctctcctatctctctgatgggcccaatgagaagatcca 545
>ref|XM_513276.1| PREDICTED: Pan troglodytes karyopherin alpha 6 (LOC456709), mRNA Length = 1752 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1093 gtgggtaacatcgtcactggggatga 1118
>ref|NM_012316.3| Homo sapiens karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA Length = 3984 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1027 gtgggtaacatcgtcactggggatga 1052
>ref|XM_544440.2| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 1 (LOC487314), mRNA Length = 2301 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 982 gtgggtaacatcgtcactggggatga 1007
>ref|XM_859732.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 4 (LOC487314), mRNA Length = 2095 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1036 gtgggtaacatcgtcactggggatga 1061
>ref|XM_859719.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 3 (LOC487314), mRNA Length = 2197 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1036 gtgggtaacatcgtcactggggatga 1061
>ref|XM_859701.1| PREDICTED: Canis familiaris similar to Importin alpha-7 subunit (Karyopherin alpha-6), transcript variant 2 (LOC487314), mRNA Length = 2355 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1036 gtgggtaacatcgtcactggggatga 1061
>gb|BT009843.1| Homo sapiens karyopherin alpha 6 (importin alpha 7) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 952 gtgggtaacatcgtcactggggatga 977
>emb|AL049795.21|HSDJ622L5 Human DNA sequence from clone RP4-622L5 on chromosome 1p34.2-36.11 Contains the 3' end of the KPNA6 gene for karyopherin alpha 6 (importin alpha 7), a novel gene (DKFZp451J0118), a novel gene (MGC1203) a novel gene, a novel gene (FLJ10547), a novel gene, a novel gene, the 5' end of the EIF3S2 gene for eukaryotic translation initiation factor 3 subunit 2 beta 36kDa and 3 CpG islands, complete sequence Length = 115756 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 52603 gtgggtaacatcgtcactggggatga 52628
>ref|XM_783766.1| PREDICTED: Strongylocentrotus purpuratus similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1) (Pendulin) (Pore targeting complex 58 kDa subunit) (PTAC58) (Importin alpha P1) (LOC583874), mRNA Length = 1730 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacct 53 |||||||||||||||||||| ||||| Sbjct: 925 gatgcctgctgggctctctcatacct 950
>emb|CR859588.1| Pongo pygmaeus mRNA; cDNA DKFZp459M124 (from clone DKFZp459M124) Length = 3935 Score = 44.1 bits (22), Expect = 0.40 Identities = 34/38 (89%) Strand = Plus / Plus Query: 26 ctgatgcctgctgggctctctcgtacctgtctgatgga 63 |||||||||||||||| ||||| || ||||| |||||| Sbjct: 1007 ctgatgcctgctgggccctctcatatctgtcagatgga 1044
>emb|CR858533.1| Pongo pygmaeus mRNA; cDNA DKFZp469C0723 (from clone DKFZp469C0723) Length = 3763 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1009 gtgggtaacatcgtcactggggatga 1034
>dbj|AK128609.1| Homo sapiens cDNA FLJ46768 fis, clone TRACH3025316, highly similar to Importin alpha-6 subunit Length = 3937 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1003 gtgggtaacatcgtcactggggatga 1028
>emb|CR592029.1| full-length cDNA clone CS0DI066YM05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1818 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 673 gtgggtaacatcgtcactggggatga 698
>dbj|AK002111.1| Homo sapiens cDNA FLJ11249 fis, clone PLACE1008790, highly similar to Homo sapiens importin alpha 7 subunit mRNA Length = 2206 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1027 gtgggtaacatcgtcactggggatga 1052
>dbj|AB169013.1| Macaca fascicularis testis cDNA, clone: QtsA-16573, similar to human karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA, RefSeq: NM_012316.3 Length = 2228 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1022 gtgggtaacatcgtcactggggatga 1047 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| || || || |||||||||||| | ||||| |||||||| Sbjct: 881 gatgcttgctgggccctttcttatctgtctgatggacccaatgagaagatcca 933
>dbj|AB168542.1| Macaca fascicularis testis cDNA clone: QtsA-12891, similar to human karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA, RefSeq: NM_012316.3 Length = 2044 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1016 gtgggtaacatcgtcactggggatga 1041 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 ||||| |||||||| || || || |||||||||||| | ||||| |||||||| Sbjct: 875 gatgcttgctgggccctttcttatctgtctgatggacccaatgagaagatcca 927
>gb|BC103363.1| Bos taurus similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), mRNA (cDNA clone MGC:127507 IMAGE:7950991), complete cds Length = 2069 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctgg 317 |||||||| ||||||||||||||||| Sbjct: 1195 tggactatgtcaaacatcacagctgg 1220
>gb|AY888861.1| Synthetic construct Homo sapiens clone FLH109799.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 952 gtgggtaacatcgtcactggggatga 977
>gb|AY888860.1| Synthetic construct Homo sapiens clone FLH109798.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 952 gtgggtaacatcgtcactggggatga 977
>gb|AY888859.1| Synthetic construct Homo sapiens clone FLH109795.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 952 gtgggtaacatcgtcactggggatga 977
>gb|AY888858.1| Synthetic construct Homo sapiens clone FLH109794.01X karyopherin alpha 6 (KPNA6) mRNA, complete cds Length = 1611 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 952 gtgggtaacatcgtcactggggatga 977
>gb|AF060543.1|AF060543 Homo sapiens importin alpha 7 subunit mRNA, complete cds Length = 1669 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1007 gtgggtaacatcgtcactggggatga 1032
>gb|BC020520.1| Homo sapiens karyopherin alpha 6 (importin alpha 7), mRNA (cDNA clone MGC:17918 IMAGE:3913864), complete cds Length = 3967 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 169 gtgggtaacatcgtcactggtgatga 194 |||||||||||||||||||| ||||| Sbjct: 1015 gtgggtaacatcgtcactggggatga 1040
>ref|NM_001034449.1| Bos taurus similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1) (MGC127507), mRNA Length = 2069 Score = 44.1 bits (22), Expect = 0.40 Identities = 25/26 (96%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctgg 317 |||||||| ||||||||||||||||| Sbjct: 1195 tggactatgtcaaacatcacagctgg 1220
>ref|XM_518711.1| PREDICTED: Pan troglodytes similar to karyopherin alpha 5 (importin alpha 6); importin alpha 6 (LOC462963), mRNA Length = 1846 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | || |||||||| ||||| || | | |||||||||||| Sbjct: 1295 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1354 Query: 340 gttat 344 ||||| Sbjct: 1355 gttat 1359
>ref|XM_654654.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN2142.2), mRNA Length = 1662 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 aacatcgtcactggtgatgat 195 ||||||||||||||||||||| Sbjct: 958 aacatcgtcactggtgatgat 978
>ref|XM_844248.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 1 (LOC608024), mRNA Length = 1967 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1198 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1238
>ref|XM_863031.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 2 (LOC610680), mRNA Length = 1957 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1193 tggacaatgtcaaacatcacagctggtcgccaggaccagat 1233
>ref|XM_848926.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 1 (LOC610680), mRNA Length = 1919 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1155 tggacaatgtcaaacatcacagctggtcgccaggaccagat 1195
>ref|XM_448210.1| Candida glabrata CBS138, CAGL0J11440g partial mRNA Length = 1632 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctc 302 |||||||||||||| |||||| ||||||| Sbjct: 1198 atcaagaaagaagcttgctgggctatctc 1226
>ref|XM_857043.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 6 (LOC480469), mRNA Length = 2394 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1620 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1660
>ref|XM_857018.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 5 (LOC480469), mRNA Length = 2052 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1278 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1318
>ref|XM_856990.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 4 (LOC480469), mRNA Length = 1893 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1119 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1159
>ref|XM_845584.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 1 (LOC480469), mRNA Length = 1968 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1194 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1234
>ref|XM_856928.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 3 (LOC480469), mRNA Length = 1981 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1207 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1247
>ref|XM_856897.1| PREDICTED: Canis familiaris similar to Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1), transcript variant 2 (LOC480469), mRNA Length = 1992 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 292 tggactatctcaaacatcacagctggtaaccgggaccagat 332 ||||| || |||||||||||||||||| || ||||||||| Sbjct: 1218 tggacgatgtcaaacatcacagctggtcgccaggaccagat 1258
>gb|AF465210.1| Emericella nidulans karyopherin alpha (kapA) gene, complete cds Length = 1942 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 175 aacatcgtcactggtgatgat 195 ||||||||||||||||||||| Sbjct: 1238 aacatcgtcactggtgatgat 1258
>ref|XM_779791.1| PREDICTED: Strongylocentrotus purpuratus similar to karyopherin (importin) alpha 6 (predicted) (LOC579689), mRNA Length = 1502 Score = 42.1 bits (21), Expect = 1.6 Identities = 45/53 (84%) Strand = Plus / Plus Query: 28 gatgcctgctgggctctctcgtacctgtctgatggaactaatgacaagatcca 80 |||||||||||||| || || || || || |||||| ||||||| |||||||| Sbjct: 499 gatgcctgctgggcactgtcctatctatccgatggacctaatgaaaagatcca 551
>emb|CR380956.1| Candida glabrata strain CBS138 chromosome J complete sequence Length = 1192501 Score = 42.1 bits (21), Expect = 1.6 Identities = 27/29 (93%) Strand = Plus / Minus Query: 274 atcaagaaagaagcatgctggactatctc 302 |||||||||||||| |||||| ||||||| Sbjct: 1107987 atcaagaaagaagcttgctgggctatctc 1107959
>gb|BC047409.1| Homo sapiens karyopherin alpha 5 (importin alpha 6), mRNA (cDNA clone MGC:51011 IMAGE:5297277), complete cds Length = 2164 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | || |||||||| ||||| || | | |||||||||||| Sbjct: 1192 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1251 Query: 340 gttat 344 ||||| Sbjct: 1252 gttat 1256
>emb|AJ720294.1| Gallus gallus mRNA for hypothetical protein, clone 14f8 Length = 3007 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagc 314 |||| ||||||||| |||||||| || || ||||||||||| Sbjct: 1131 atcaggaaagaagcctgctggaccatatctaacatcacagc 1171
>ref|NM_001012841.1| Gallus gallus karyopherin alpha 6 (importin alpha 7) (KPNA6), mRNA Length = 3007 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagc 314 |||| ||||||||| |||||||| || || ||||||||||| Sbjct: 1131 atcaggaaagaagcctgctggaccatatctaacatcacagc 1171
>gb|AC022495.17| Homo sapiens 3 BAC RP11-94I16 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 156054 Score = 42.1 bits (21), Expect = 1.6 Identities = 24/25 (96%) Strand = Plus / Plus Query: 23 tcactgatgcctgctgggctctctc 47 ||||||| ||||||||||||||||| Sbjct: 103560 tcactgaagcctgctgggctctctc 103584
>ref|NM_002269.2| Homo sapiens karyopherin alpha 5 (importin alpha 6) (KPNA5), mRNA Length = 2172 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | || |||||||| ||||| || | | |||||||||||| Sbjct: 1200 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1259 Query: 340 gttat 344 ||||| Sbjct: 1260 gttat 1264
>gb|AF353397.1|AF353397 Colletotrichum lagenarium cAMP-dependent protein kinase regulatory subunit (RPK1) gene, complete cds Length = 1493 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 tctcttgaacctcttgactac 257 ||||||||||||||||||||| Sbjct: 48 tctcttgaacctcttgactac 68
>emb|BX935686.2| Gallus gallus finished cDNA, clone ChEST758n9 Length = 2063 Score = 42.1 bits (21), Expect = 1.6 Identities = 36/41 (87%) Strand = Plus / Plus Query: 274 atcaagaaagaagcatgctggactatctcaaacatcacagc 314 |||| ||||||||| |||||||| || || ||||||||||| Sbjct: 1045 atcaggaaagaagcctgctggaccatatctaacatcacagc 1085
>gb|AF046922.1|AF046922 Colletotrichum trifolii cAMP-dependent protein kinase regulatory subunit (pkaR) gene, complete cds Length = 1718 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 237 tctcttgaacctcttgactac 257 ||||||||||||||||||||| Sbjct: 355 tctcttgaacctcttgactac 375
>dbj|AK108825.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-151-F08, full insert sequence Length = 2881 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Minus Query: 146 ttctcattccagctctgcgca 166 ||||||||||||||||||||| Sbjct: 330 ttctcattccagctctgcgca 310
>gb|AY267540.1| Toxoplasma gondii importin alpha mRNA, complete cds Length = 1638 Score = 42.1 bits (21), Expect = 1.6 Identities = 21/21 (100%) Strand = Plus / Plus Query: 31 gcctgctgggctctctcgtac 51 ||||||||||||||||||||| Sbjct: 823 gcctgctgggctctctcgtac 843
>gb|AF005361.1|HUMIMPA6 Homo sapiens importin alpha 6 mRNA, complete cds Length = 1694 Score = 42.1 bits (21), Expect = 1.6 Identities = 54/65 (83%) Strand = Plus / Plus Query: 280 aaagaagcatgctggactatctcaaacatcacagctggtaaccgggaccagattcaggct 339 |||||||| ||||||||| | || |||||||| ||||| || | | |||||||||||| Sbjct: 1065 aaagaagcctgctggactgtttctaacatcactgctggaaatagagctcagattcaggct 1124 Query: 340 gttat 344 ||||| Sbjct: 1125 gttat 1129
>ref|NM_124308.1| Arabidopsis thaliana protein transporter AT5G49310 mRNA, complete cds Length = 1560 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgc 434 ||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 1134 tgctgaatttgacataaagaaagaagctatatgggcaatttcaaatgc 1181
>gb|CP000153.1| Thiomicrospira denitrificans ATCC 33889, complete genome Length = 2201561 Score = 40.1 bits (20), Expect = 6.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 421 gcaatttcaaatgccacttctggt 444 |||||| ||||||||||||||||| Sbjct: 1997269 gcaattgcaaatgccacttctggt 1997292
>ref|NM_213070.1| Danio rerio zgc:55877 (zgc:55877), mRNA Length = 1777 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggaggcagcttgggca 423 |||||||||||||||||||| Sbjct: 1168 agaaggaggcagcttgggca 1187
>gb|AE017344.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 4, complete sequence Length = 1783081 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Minus Query: 403 aagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||| ||| |||||| || || ||||||||||||||||| Sbjct: 1311325 aagaaggaagcatgttgggccatctccaatgccacttctggtgg 1311282
>gb|BC044523.1| Danio rerio zgc:55877, mRNA (cDNA clone MGC:55877 IMAGE:3818596), complete cds Length = 1777 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggaggcagcttgggca 423 |||||||||||||||||||| Sbjct: 1168 agaaggaggcagcttgggca 1187
>gb|BT012788.1| Lycopersicon esculentum clone 113780F, mRNA sequence Length = 2264 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 gctgaatttgacattaagaa 407 |||||||||||||||||||| Sbjct: 1716 gctgaatttgacattaagaa 1735
>ref|XM_750851.1| Aspergillus fumigatus Af293 karyopherin subunit alpha (Afu2g16090) partial mRNA Length = 1659 Score = 40.1 bits (20), Expect = 6.3 Identities = 32/36 (88%) Strand = Plus / Plus Query: 27 tgatgcctgctgggctctctcgtacctgtctgatgg 62 |||||| |||||||| |||| |||||||||||||| Sbjct: 810 tgatgcttgctgggccatctcctacctgtctgatgg 845
>ref|XM_570493.1| Cryptococcus neoformans var. neoformans JEC21 Importin alpha subunit (CND04770) partial mRNA Length = 2417 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 403 aagaaggaggcagcttgggcaatttcaaatgccacttctggtgg 446 |||||||| ||| |||||| || || ||||||||||||||||| Sbjct: 1238 aagaaggaagcatgttgggccatctccaatgccacttctggtgg 1281
>gb|DQ447055.1| Arabidopsis thaliana clone pENTR221-At5g49310 importin alpha-1 subunit (At5g49310) mRNA, complete cds Length = 1290 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgc 434 ||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 864 tgctgaatttgacataaagaaagaagctatatgggcaatttcaaatgc 911
>gb|DQ447054.1| Arabidopsis thaliana clone pENTR221-At5g49310 importin alpha-1 subunit (At5g49310) mRNA, complete cds Length = 1560 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Plus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgc 434 ||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 1134 tgctgaatttgacataaagaaagaagctatatgggcaatttcaaatgc 1181
>emb|AL451000.16| Human DNA sequence from clone RP11-223J15 on chromosome 1 Contains a novel gene (MDS2), a eukaryotic translation elongation factor 1 alpha 2 (EEF1A2) pseudogene and the RPL11 gene for ribosomal protein L11, complete sequence Length = 115566 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 caaacatcacagctggtaac 321 |||||||||||||||||||| Sbjct: 106099 caaacatcacagctggtaac 106080
>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence Length = 3363523 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 gaatctggcgtttttcctcg 110 |||||||||||||||||||| Sbjct: 2973382 gaatctggcgtttttcctcg 2973363
>gb|AC158645.6| Mus musculus 6 BAC RP23-435I16 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 177739 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 405 gaaggaggcagcttgggcaa 424 |||||||||||||||||||| Sbjct: 100210 gaaggaggcagcttgggcaa 100229
>ref|XM_697528.1| PREDICTED: Danio rerio hypothetical protein LOC554651 (LOC554651), mRNA Length = 1046 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggaggcagcttgggca 423 |||||||||||||||||||| Sbjct: 474 agaaggaggcagcttgggca 493
>gb|AC159549.11| Mus musculus 6 BAC RP23-304D1 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 236543 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 405 gaaggaggcagcttgggcaa 424 |||||||||||||||||||| Sbjct: 214391 gaaggaggcagcttgggcaa 214372
>gb|AF101385.3|HOMORPL2 Homo sapiens ribosomal protein L11 gene, complete cds Length = 5373 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 302 caaacatcacagctggtaac 321 |||||||||||||||||||| Sbjct: 2342 caaacatcacagctggtaac 2323
>gb|AC093639.5| Homo sapiens BAC clone RP11-315C24 from 2, complete sequence Length = 153053 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 197 tgcagactcagtgagtcatt 216 |||||||||||||||||||| Sbjct: 33923 tgcagactcagtgagtcatt 33904
>dbj|AB016872.1| Arabidopsis thaliana genomic DNA, chromosome 5, TAC clone:K21P3 Length = 86001 Score = 40.1 bits (20), Expect = 6.3 Identities = 41/48 (85%) Strand = Plus / Minus Query: 387 tgctgaatttgacattaagaaggaggcagcttgggcaatttcaaatgc 434 ||||||||||||||| ||||| || || ||||||||||||||||| Sbjct: 70633 tgctgaatttgacataaagaaagaagctatatgggcaatttcaaatgc 70586
>emb|CR925781.6| Zebrafish DNA sequence from clone DKEY-3B23 in linkage group 10, complete sequence Length = 202134 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 404 agaaggaggcagcttgggca 423 |||||||||||||||||||| Sbjct: 168168 agaaggaggcagcttgggca 168187
>dbj|AK112301.1| Ciona intestinalis cDNA, clone:ciad011g12, full insert sequence Length = 2342 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 34 tgctgggctctctcgtacctgtctgatggaactaatgacaagat 77 ||||||||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 826 tgctgggctctttcgtatctatctgatggaccaaatgaaaagat 869
>dbj|AK112259.1| Ciona intestinalis cDNA, clone:cieg015e04, full insert sequence Length = 1768 Score = 40.1 bits (20), Expect = 6.3 Identities = 38/44 (86%) Strand = Plus / Plus Query: 34 tgctgggctctctcgtacctgtctgatggaactaatgacaagat 77 ||||||||||| ||||| || ||||||||| | ||||| ||||| Sbjct: 842 tgctgggctctttcgtatctatctgatggaccaaatgaaaagat 885
>emb|AL713874.8| Mouse DNA sequence from clone RP23-375P22 on chromosome 4, complete sequence Length = 138663 Score = 40.1 bits (20), Expect = 6.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 207 gtgagtcattgataaccaag 226 |||||||||||||||||||| Sbjct: 2763 gtgagtcattgataaccaag 2782 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,237,378 Number of Sequences: 3902068 Number of extensions: 4237378 Number of successful extensions: 78042 Number of sequences better than 10.0: 185 Number of HSP's better than 10.0 without gapping: 178 Number of HSP's successfully gapped in prelim test: 8 Number of HSP's that attempted gapping in prelim test: 77494 Number of HSP's gapped (non-prelim): 534 length of query: 467 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 445 effective length of database: 17,147,199,772 effective search space: 7630503898540 effective search space used: 7630503898540 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)