ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet91d01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1IDGF4_DROME (Q9W303) Chitinase-like protein Idgf4 precursor (Ima... 30 3.1
2TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box tran... 29 6.8

>IDGF4_DROME (Q9W303) Chitinase-like protein Idgf4 precursor (Imaginal disk|
           growth factor protein 4)
          Length = 442

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 21/62 (33%), Positives = 27/62 (43%)
 Frame = +1

Query: 67  RLTHSHGLTPLRPLSLTRSVRLRPAGSPRRXXXXXXXXXXVPKLPGPNLHHPSGRYGPLV 246
           +LT   GLT L P++    V   PAG+  +            KLP P   H  G  GPL 
Sbjct: 305 KLTKDSGLTGLPPVAEADGVA--PAGTQTQIPGLLSWPEVCAKLPNPANQHLKGADGPLR 362

Query: 247 RV 252
           +V
Sbjct: 363 KV 364



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>TF7L1_MOUSE (Q9Z1J1) Transcription factor 7-like 1 (HMG box transcription|
           factor 3) (TCF-3) (mTCF-3)
          Length = 584

 Score = 28.9 bits (63), Expect = 6.8
 Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 4/77 (5%)
 Frame = +1

Query: 25  SVRPTKKPKSSFVSR----LTHSHGLTPLRPLSLTRSVRLRPAGSPRRXXXXXXXXXXVP 192
           +V+ T+ P  + +S     + H H + PL PL    +    PA  P            +P
Sbjct: 160 TVKDTRSPSPAHLSNKVPVVQHPHHMHPLTPLITYSNDHFSPASPPTHLSPEIDPKTGIP 219

Query: 193 KLPGPNLHHPSGRYGPL 243
           + P P+   P   Y PL
Sbjct: 220 RPPHPSELSP---YYPL 233


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 37,025,335
Number of Sequences: 219361
Number of extensions: 486294
Number of successful extensions: 1296
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1286
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 80,573,946
effective HSP length: 102
effective length of database: 58,199,124
effective search space used: 3026354448
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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