ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet91a10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_188234.1| Oryza sativa (japonica cultivar-group), predic... 444 e-121
2dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 444 e-121
3dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic D... 444 e-121
4dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic D... 444 e-121
5ref|XM_476099.1| Oryza sativa (japonica cultivar-group), predic... 208 1e-50
6gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
7gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome... 208 1e-50
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 208 1e-50
9dbj|AK069019.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
10gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, co... 46 0.088
11ref|NM_187520.1| Oryza sativa (japonica cultivar-group), predic... 44 0.35
12ref|NM_193205.1| Oryza sativa (japonica cultivar-group), predic... 44 0.35
13gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic ... 44 0.35
14gb|DQ472190.1| Trypanosoma cruzi strain CL Brener formin 127 kDa... 44 0.35
15gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.35
16ref|XM_803262.1| Trypanosoma cruzi strain CL Brener formin (Tc00... 44 0.35
17gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.35
18gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome 44 0.35
19dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
21gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 dapto... 44 0.35
22dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
23dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
24dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.35
25dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
26dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
27dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
28dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.35
29ref|XM_470137.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
30ref|XM_466892.1| Oryza sativa (japonica cultivar-group), mRNA 42 1.4
31gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome 42 1.4
32ref|XM_810025.1| Trypanosoma cruzi strain CL Brener dispersed ge... 42 1.4
33emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 o... 42 1.4
34gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete ... 42 1.4
35gb|DQ445513.1| Graphocephala atropunctata isolate WHGA0380 putat... 42 1.4
36gb|U59787.1| Asterocolax gardneri natural-host Polyneura latissi... 42 1.4
37gb|U59786.1| Polyneura latissima 18S ribosomal RNA gene, partial... 42 1.4
38gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswel... 42 1.4
39dbj|AB249656.1| Oryza sativa (japonica cultivar-group) OsRR11 mR... 42 1.4
40ref|NM_168941.2| Drosophila melanogaster Nopp140 CG7421-RA, tran... 42 1.4
41dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
42gb|AC133781.4| Homo sapiens BAC clone RP11-756K13 from 2, comple... 42 1.4
43gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic ... 42 1.4
44gb|AC133528.4| Homo sapiens BAC clone RP11-367H1 from 2, complet... 42 1.4
45gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 42 1.4
46gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, comple... 42 1.4
47dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.4
48dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
49dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic D... 42 1.4
50gb|BT021407.1| Drosophila melanogaster LD06749 full insert cDNA 42 1.4
51dbj|AK065862.1| Oryza sativa (japonica cultivar-group) cDNA clon... 42 1.4
52gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76... 42 1.4
53gb|AF162774.2| Drosophila melanogaster Nopp140-like nucleolar pr... 42 1.4
54gb|L13083.1|LOLG9I Lolium perenne isoform 9 mRNA, complete cds 42 1.4
55gb|DQ231252.1| Oryza sativa (japonica cultivar-group) SNARE prot... 40 5.4
56gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of ... 40 5.4
57ref|XM_465319.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
58ref|XM_470368.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.4
59ref|NM_032329.4| Homo sapiens inhibitor of growth family, member... 40 5.4
60gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete ... 40 5.4
61gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 geno... 40 5.4
62ref|XM_954389.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
63ref|XM_331094.1| Neurospora crassa OR74A hypothetical protein (N... 40 5.4
64gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, ... 40 5.4
65ref|XM_801490.1| Trypanosoma cruzi strain CL Brener hypothetical... 40 5.4
66emb|BX057456.1|CNS09GHW Single read from an extremity of a full-... 40 5.4
67emb|BX045614.1|CNS097CY Single read from an extremity of a full-... 40 5.4
68gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic g... 40 5.4
69gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide... 40 5.4
70emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 5.4
71gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 40 5.4
72dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
73gb|AC008354.3|AC008354 Drosophila melanogaster, chromosome 2L, r... 40 5.4
74emb|BX935052.1| Gallus gallus finished cDNA, clone ChEST74o12 40 5.4
75dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 5.4
76gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genom... 40 5.4
77gb|AF329398.1| Streptomyces roseochromogenes subsp. oscitans clo... 40 5.4
78dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.4
79dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
80dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.4
81dbj|AK119871.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
82dbj|AK074422.1| Homo sapiens cDNA FLJ23842 fis, clone KAT05909 40 5.4
83gb|AE001439.1| Helicobacter pylori J99, complete genome 40 5.4
84dbj|AK065950.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 5.4
85gb|AY913105.1| Uncultured forest soil bacterium clone DUNnos233 ... 40 5.4
86gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26... 40 5.4
87gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete ge... 40 5.4
88emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete ... 40 5.4
89gb|AF016696.1| Streptomyces fradiae peptide synthetase module (c... 40 5.4

>ref|NM_188234.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 987

 Score =  444 bits (224), Expect = e-121
 Identities = 359/404 (88%)
 Strand = Plus / Plus

                                                                       
Query: 1   caccctctccgtggcgcgcgtcaacaagctcagcctctccagctccgccacggcgcccgc 60
           |||||||||||| || |||||| |||||||||||||||||  ||||||||| |||||| |
Sbjct: 396 caccctctccgtcgcccgcgtcgacaagctcagcctctcctcctccgccaccgcgcccac 455

                                                                       
Query: 61  gctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtcta 120
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 gctcaccgactccatcgacgtcacgctcaccgccaagaaccccaacaagaagctcgtcta 515

                                                                       
Query: 121 cctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggga 180
           ||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 516 cctctacgacgacttcgccgtcaccgccgccaccgccgccaacgccgtcccgctcgggga 575

                                                                       
Query: 181 ggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccgt 240
           ||   |||| || || ||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 576 gggatccgtccctggcttcgtccacgacgccggcaacatcaccgtcatcaaggccaccgt 635

                                                                       
Query: 241 ctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcggg 300
           ||||||  |||| ||||| |||||||||||| |||||  | |||||||||||||||| ||
Sbjct: 636 ctccgcctccgccctcggcgtcgaccccaccaccgccgccaccgacatcaagaagtccgg 695

                                                                       
Query: 301 caccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctcaa 360
           |   ||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 696 cgagttcaccatcaccctcgacctcgagaccaaggccggcgtcaaggtcggcggcctcaa 755

                                                       
Query: 361 gaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
           ||||||||| |||||| | |  || |||||||| ||||||||||
Sbjct: 756 gaccaagaaaatcggcgtgctcgtccactgcgagggcatcaagg 799



to top

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  444 bits (224), Expect = e-121
 Identities = 359/404 (88%)
 Strand = Plus / Minus

                                                                           
Query: 1       caccctctccgtggcgcgcgtcaacaagctcagcctctccagctccgccacggcgcccgc 60
               |||||||||||| || |||||| |||||||||||||||||  ||||||||| |||||| |
Sbjct: 5131598 caccctctccgtcgcccgcgtcgacaagctcagcctctcctcctccgccaccgcgcccac 5131539

                                                                           
Query: 61      gctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtcta 120
               ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 5131538 gctcaccgactccatcgacgtcacgctcaccgccaagaaccccaacaagaagctcgtcta 5131479

                                                                           
Query: 121     cctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggga 180
               ||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 5131478 cctctacgacgacttcgccgtcaccgccgccaccgccgccaacgccgtcccgctcgggga 5131419

                                                                           
Query: 181     ggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccgt 240
               ||   |||| || || ||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 5131418 gggatccgtccctggcttcgtccacgacgccggcaacatcaccgtcatcaaggccaccgt 5131359

                                                                           
Query: 241     ctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcggg 300
               ||||||  |||| ||||| |||||||||||| |||||  | |||||||||||||||| ||
Sbjct: 5131358 ctccgcctccgccctcggcgtcgaccccaccaccgccgccaccgacatcaagaagtccgg 5131299

                                                                           
Query: 301     caccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctcaa 360
               |   ||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 5131298 cgagttcaccatcaccctcgacctcgagaccaaggccggcgtcaaggtcggcggcctcaa 5131239

                                                           
Query: 361     gaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
               ||||||||| |||||| | |  || |||||||| ||||||||||
Sbjct: 5131238 gaccaagaaaatcggcgtgctcgtccactgcgagggcatcaagg 5131195



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                          
Query: 142      caccgccgccacggccgccaacgccg 167
                |||||||||||| |||||||||||||
Sbjct: 19278498 caccgccgccaccgccgccaacgccg 19278473



to top

>dbj|AP002537.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0001B06
          Length = 140304

 Score =  444 bits (224), Expect = e-121
 Identities = 359/404 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      caccctctccgtggcgcgcgtcaacaagctcagcctctccagctccgccacggcgcccgc 60
              |||||||||||| || |||||| |||||||||||||||||  ||||||||| |||||| |
Sbjct: 125036 caccctctccgtcgcccgcgtcgacaagctcagcctctcctcctccgccaccgcgcccac 124977

                                                                          
Query: 61     gctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtcta 120
              ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 124976 gctcaccgactccatcgacgtcacgctcaccgccaagaaccccaacaagaagctcgtcta 124917

                                                                          
Query: 121    cctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggga 180
              ||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 124916 cctctacgacgacttcgccgtcaccgccgccaccgccgccaacgccgtcccgctcgggga 124857

                                                                          
Query: 181    ggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccgt 240
              ||   |||| || || ||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 124856 gggatccgtccctggcttcgtccacgacgccggcaacatcaccgtcatcaaggccaccgt 124797

                                                                          
Query: 241    ctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcggg 300
              ||||||  |||| ||||| |||||||||||| |||||  | |||||||||||||||| ||
Sbjct: 124796 ctccgcctccgccctcggcgtcgaccccaccaccgccgccaccgacatcaagaagtccgg 124737

                                                                          
Query: 301    caccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctcaa 360
              |   ||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 124736 cgagttcaccatcaccctcgacctcgagaccaaggccggcgtcaaggtcggcggcctcaa 124677

                                                          
Query: 361    gaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
              ||||||||| |||||| | |  || |||||||| ||||||||||
Sbjct: 124676 gaccaagaaaatcggcgtgctcgtccactgcgagggcatcaagg 124633



to top

>dbj|AP003417.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0498B01
          Length = 146812

 Score =  444 bits (224), Expect = e-121
 Identities = 359/404 (88%)
 Strand = Plus / Minus

                                                                         
Query: 1     caccctctccgtggcgcgcgtcaacaagctcagcctctccagctccgccacggcgcccgc 60
             |||||||||||| || |||||| |||||||||||||||||  ||||||||| |||||| |
Sbjct: 63629 caccctctccgtcgcccgcgtcgacaagctcagcctctcctcctccgccaccgcgcccac 63570

                                                                         
Query: 61    gctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtcta 120
             ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 63569 gctcaccgactccatcgacgtcacgctcaccgccaagaaccccaacaagaagctcgtcta 63510

                                                                         
Query: 121   cctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggga 180
             ||| |||||||||||| |||||||||||||||| |||||||||||||| |||||||||||
Sbjct: 63509 cctctacgacgacttcgccgtcaccgccgccaccgccgccaacgccgtcccgctcgggga 63450

                                                                         
Query: 181   ggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccgt 240
             ||   |||| || || ||| | ||||| ||| ||||||||||||||||||||||||||||
Sbjct: 63449 gggatccgtccctggcttcgtccacgacgccggcaacatcaccgtcatcaaggccaccgt 63390

                                                                         
Query: 241   ctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcggg 300
             ||||||  |||| ||||| |||||||||||| |||||  | |||||||||||||||| ||
Sbjct: 63389 ctccgcctccgccctcggcgtcgaccccaccaccgccgccaccgacatcaagaagtccgg 63330

                                                                         
Query: 301   caccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctcaa 360
             |   ||| |||||||||||||||| ||||||||||||||||||||||| ||||| |||||
Sbjct: 63329 cgagttcaccatcaccctcgacctcgagaccaaggccggcgtcaaggtcggcggcctcaa 63270

                                                         
Query: 361   gaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
             ||||||||| |||||| | |  || |||||||| ||||||||||
Sbjct: 63269 gaccaagaaaatcggcgtgctcgtccactgcgagggcatcaagg 63226



to top

>ref|XM_476099.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 876

 Score =  208 bits (105), Expect = 1e-50
 Identities = 285/345 (82%)
 Strand = Plus / Plus

                                                                       
Query: 60  cgctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtct 119
           ||||||||||||||||| |  ||||  |||||||||||||||||||||||||| ||||||
Sbjct: 344 cgctcaccgactccatccagctcaccgtcaccgccaagaaccccaacaagaaggtcgtct 403

                                                                       
Query: 120 acctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggg 179
           |||| |||||||||||| || || ||||| |||| |||||||||||||| |||||||| |
Sbjct: 404 acctctacgacgacttctccttctccgcctccaccgccgccaacgccgtcccgctcggcg 463

                                                                       
Query: 180 aggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccg 239
             || ||   |||||| |||   ||||| ||| |||||| ||||||| |||  |||||| 
Sbjct: 464 ccgccacgtcgccgggcttcacccacgacgccggcaacaccaccgtcttcaccgccacca 523

                                                                       
Query: 240 tctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcgg 299
           || ||||   |||  |||  ||||||||  ||||||||  |||||||||||||||||| |
Sbjct: 524 tcgccgccaacgccgtcgccgtcgacccggccgccgccgcctccgacatcaagaagtccg 583

                                                                       
Query: 300 gcaccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctca 359
           || ||||| || || || |||||   |||||    |||||||||| ||||||| | ||||
Sbjct: 584 gcgccttctccgtcgccgtcgacgccgagacgcgcgccggcgtcagggtgggcagcctca 643

                                                        
Query: 360 agaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
           |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 644 agaccaagaagatcggcatccaggtgcactgcgagggcatcaagg 688



to top

>gb|AC136520.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017O06, complete sequence
          Length = 151656

 Score =  208 bits (105), Expect = 1e-50
 Identities = 285/345 (82%)
 Strand = Plus / Minus

                                                                         
Query: 60    cgctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtct 119
             ||||||||||||||||| |  ||||  |||||||||||||||||||||||||| ||||||
Sbjct: 31465 cgctcaccgactccatccagctcaccgtcaccgccaagaaccccaacaagaaggtcgtct 31406

                                                                         
Query: 120   acctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggg 179
             |||| |||||||||||| || || ||||| |||| |||||||||||||| |||||||| |
Sbjct: 31405 acctctacgacgacttctccttctccgcctccaccgccgccaacgccgtcccgctcggcg 31346

                                                                         
Query: 180   aggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccg 239
               || ||   |||||| |||   ||||| ||| |||||| ||||||| |||  |||||| 
Sbjct: 31345 ccgccacgtcgccgggcttcacccacgacgccggcaacaccaccgtcttcaccgccacca 31286

                                                                         
Query: 240   tctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcgg 299
             || ||||   |||  |||  ||||||||  ||||||||  |||||||||||||||||| |
Sbjct: 31285 tcgccgccaacgccgtcgccgtcgacccggccgccgccgcctccgacatcaagaagtccg 31226

                                                                         
Query: 300   gcaccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctca 359
             || ||||| || || || |||||   |||||    |||||||||| ||||||| | ||||
Sbjct: 31225 gcgccttctccgtcgccgtcgacgccgagacgcgcgccggcgtcagggtgggcagcctca 31166

                                                          
Query: 360   agaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
             |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 31165 agaccaagaagatcggcatccaggtgcactgcgagggcatcaagg 31121



to top

>gb|AC136519.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0007C23,
              complete sequence
          Length = 173764

 Score =  208 bits (105), Expect = 1e-50
 Identities = 285/345 (82%)
 Strand = Plus / Minus

                                                                          
Query: 60     cgctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtct 119
              ||||||||||||||||| |  ||||  |||||||||||||||||||||||||| ||||||
Sbjct: 131450 cgctcaccgactccatccagctcaccgtcaccgccaagaaccccaacaagaaggtcgtct 131391

                                                                          
Query: 120    acctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggg 179
              |||| |||||||||||| || || ||||| |||| |||||||||||||| |||||||| |
Sbjct: 131390 acctctacgacgacttctccttctccgcctccaccgccgccaacgccgtcccgctcggcg 131331

                                                                          
Query: 180    aggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccg 239
                || ||   |||||| |||   ||||| ||| |||||| ||||||| |||  |||||| 
Sbjct: 131330 ccgccacgtcgccgggcttcacccacgacgccggcaacaccaccgtcttcaccgccacca 131271

                                                                          
Query: 240    tctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcgg 299
              || ||||   |||  |||  ||||||||  ||||||||  |||||||||||||||||| |
Sbjct: 131270 tcgccgccaacgccgtcgccgtcgacccggccgccgccgcctccgacatcaagaagtccg 131211

                                                                          
Query: 300    gcaccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctca 359
              || ||||| || || || |||||   |||||    |||||||||| ||||||| | ||||
Sbjct: 131210 gcgccttctccgtcgccgtcgacgccgagacgcgcgccggcgtcagggtgggcagcctca 131151

                                                           
Query: 360    agaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
              |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 131150 agaccaagaagatcggcatccaggtgcactgcgagggcatcaagg 131106



to top

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
               sequence
          Length = 29737217

 Score =  208 bits (105), Expect = 1e-50
 Identities = 285/345 (82%)
 Strand = Plus / Minus

                                                                           
Query: 60      cgctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtct 119
               ||||||||||||||||| |  ||||  |||||||||||||||||||||||||| ||||||
Sbjct: 6083896 cgctcaccgactccatccagctcaccgtcaccgccaagaaccccaacaagaaggtcgtct 6083837

                                                                           
Query: 120     acctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggg 179
               |||| |||||||||||| || || ||||| |||| |||||||||||||| |||||||| |
Sbjct: 6083836 acctctacgacgacttctccttctccgcctccaccgccgccaacgccgtcccgctcggcg 6083777

                                                                           
Query: 180     aggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccg 239
                 || ||   |||||| |||   ||||| ||| |||||| ||||||| |||  |||||| 
Sbjct: 6083776 ccgccacgtcgccgggcttcacccacgacgccggcaacaccaccgtcttcaccgccacca 6083717

                                                                           
Query: 240     tctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcgg 299
               || ||||   |||  |||  ||||||||  ||||||||  |||||||||||||||||| |
Sbjct: 6083716 tcgccgccaacgccgtcgccgtcgacccggccgccgccgcctccgacatcaagaagtccg 6083657

                                                                           
Query: 300     gcaccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctca 359
               || ||||| || || || |||||   |||||    |||||||||| ||||||| | ||||
Sbjct: 6083656 gcgccttctccgtcgccgtcgacgccgagacgcgcgccggcgtcagggtgggcagcctca 6083597

                                                            
Query: 360     agaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
               |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 6083596 agaccaagaagatcggcatccaggtgcactgcgagggcatcaagg 6083552



to top

>dbj|AK069019.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013170B15, full
           insert sequence
          Length = 1270

 Score =  208 bits (105), Expect = 1e-50
 Identities = 285/345 (82%)
 Strand = Plus / Plus

                                                                       
Query: 60  cgctcaccgactccatcgacttcacgctcaccgccaagaaccccaacaagaagctcgtct 119
           ||||||||||||||||| |  ||||  |||||||||||||||||||||||||| ||||||
Sbjct: 459 cgctcaccgactccatccagctcaccgtcaccgccaagaaccccaacaagaaggtcgtct 518

                                                                       
Query: 120 acctgtacgacgacttcaccgtcaccgccgccacggccgccaacgccgtgccgctcgggg 179
           |||| |||||||||||| || || ||||| |||| |||||||||||||| |||||||| |
Sbjct: 519 acctctacgacgacttctccttctccgcctccaccgccgccaacgccgtcccgctcggcg 578

                                                                       
Query: 180 aggcgaccgtgccggggttcctgcacgaggccagcaacatcaccgtcatcaaggccaccg 239
             || ||   |||||| |||   ||||| ||| |||||| ||||||| |||  |||||| 
Sbjct: 579 ccgccacgtcgccgggcttcacccacgacgccggcaacaccaccgtcttcaccgccacca 638

                                                                       
Query: 240 tctccgcggccgcgctcggggtcgaccccaccgccgccagctccgacatcaagaagtcgg 299
           || ||||   |||  |||  ||||||||  ||||||||  |||||||||||||||||| |
Sbjct: 639 tcgccgccaacgccgtcgccgtcgacccggccgccgccgcctccgacatcaagaagtccg 698

                                                                       
Query: 300 gcaccttcgccatcaccctcgacctggagaccaaggccggcgtcaaggtgggcgggctca 359
           || ||||| || || || |||||   |||||    |||||||||| ||||||| | ||||
Sbjct: 699 gcgccttctccgtcgccgtcgacgccgagacgcgcgccggcgtcagggtgggcagcctca 758

                                                        
Query: 360 agaccaagaagatcggcatccaggtgcactgcgacggcatcaagg 404
           |||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 759 agaccaagaagatcggcatccaggtgcactgcgagggcatcaagg 803



to top

>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence
          Length = 2914771

 Score = 46.1 bits (23), Expect = 0.088
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 45     ccgccacggcgcccgcgctcacc 67
              |||||||||||||||||||||||
Sbjct: 635326 ccgccacggcgcccgcgctcacc 635304



to top

>ref|NM_187520.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 900

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 166 cgtgccgctcggggaggcgaccgtgccggggttc 199
           |||||||||||||| |||| ||||||| ||||||
Sbjct: 411 cgtgccgctcggggtggcggccgtgcccgggttc 444



to top

>ref|NM_193205.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 432

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 142 caccgccgccacggccgccaacgccg 167
           |||||||||||| |||||||||||||
Sbjct: 286 caccgccgccaccgccgccaacgccg 261



to top

>gb|AC097276.9| Oryza sativa chromosome 3 BAC OJ1519_A12 genomic sequence, complete
             sequence
          Length = 73070

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 37    ctccagctccgccacggcgcccgcgc 62
             ||||||||||| ||||||||||||||
Sbjct: 31197 ctccagctccgacacggcgcccgcgc 31172



to top

>gb|DQ472190.1| Trypanosoma cruzi strain CL Brener formin 127 kDa gene, complete cds
          Length = 3537

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 134  ttcaccgtcaccgccgccacggccgccaacgccg 167
            ||||||| |||||||||||| ||||||| |||||
Sbjct: 1995 ttcaccgccaccgccgccaccgccgccaccgccg 2028



to top

>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 37       ctccagctccgccacggcgcccgcgc 62
                ||||||||||| ||||||||||||||
Sbjct: 22381247 ctccagctccgacacggcgcccgcgc 22381272



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 166     cgtgccgctcggggaggcgaccgtgccggggttc 199
               |||||||||||||| |||| ||||||| ||||||
Sbjct: 8596149 cgtgccgctcggggtggcggccgtgcccgggttc 8596182



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 129      acgacttcaccgtcaccgccgccacggcc 157
                ||||||||||||||| || ||||||||||
Sbjct: 34127076 acgacttcaccgtcagcgacgccacggcc 34127104



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 142      caccgccgccacggccgccaacgcc 166
                |||||||||||| ||||||||||||
Sbjct: 12737495 caccgccgccaccgccgccaacgcc 12737519



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 35       ctctccagctccgccacggcgccc 58
                |||||||||||||||||| |||||
Sbjct: 34988183 ctctccagctccgccacgtcgccc 34988160



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 38       tccagctccgccacggcgcc 57
                ||||||||||||||||||||
Sbjct: 32391610 tccagctccgccacggcgcc 32391591



to top

>ref|XM_803262.1| Trypanosoma cruzi strain CL Brener formin (Tc00.1047053511313.30)
            partial mRNA
          Length = 3537

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 134  ttcaccgtcaccgccgccacggccgccaacgccg 167
            ||||||| |||||||||||| ||||||| |||||
Sbjct: 1995 ttcaccgccaccgccgccaccgccgccaccgccg 2028



to top

>gb|AC135206.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1041F02,
             complete sequence
          Length = 137327

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 166   cgtgccgctcggggaggcgaccgtgccggggttc 199
             |||||||||||||| |||| ||||||| ||||||
Sbjct: 77121 cgtgccgctcggggtggcggccgtgcccgggttc 77154



to top

>gb|AF281817.1|AF281817 Tupaia herpesvirus strain 2, complete genome
          Length = 195859

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 234   ccaccgtctccgcggccgcgctcggg 259
             |||||||| |||||||||||||||||
Sbjct: 89535 ccaccgtcgccgcggccgcgctcggg 89510



to top

>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                          
Query: 37       ctccagctccgccacggcgcccgcgc 62
                ||||||||||| ||||||||||||||
Sbjct: 22374276 ctccagctccgacacggcgcccgcgc 22374301



 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 166     cgtgccgctcggggaggcgaccgtgccggggttc 199
               |||||||||||||| |||| ||||||| ||||||
Sbjct: 8593984 cgtgccgctcggggtggcggccgtgcccgggttc 8594017



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                             
Query: 129      acgacttcaccgtcaccgccgccacggcc 157
                ||||||||||||||| || ||||||||||
Sbjct: 34217548 acgacttcaccgtcagcgacgccacggcc 34217576



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 142      caccgccgccacggccgccaacgcc 166
                |||||||||||| ||||||||||||
Sbjct: 12734258 caccgccgccaccgccgccaacgcc 12734282



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 35       ctctccagctccgccacggcgccc 58
                |||||||||||||||||| |||||
Sbjct: 35078255 ctctccagctccgccacgtcgccc 35078232



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 38       tccagctccgccacggcgcc 57
                ||||||||||||||||||||
Sbjct: 32482120 tccagctccgccacggcgcc 32482101



to top

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                      
Query: 51       cggcgcccgcgctcaccgactc 72
                ||||||||||||||||||||||
Sbjct: 23723517 cggcgcccgcgctcaccgactc 23723496



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                         
Query: 136      caccgtcaccgccgccacggccgcc 160
                ||||| |||||||||||||||||||
Sbjct: 25306270 caccgccaccgccgccacggccgcc 25306294



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                        
Query: 35       ctctccagctccgccacggcgccc 58
                |||||||||||||||||| |||||
Sbjct: 13406423 ctctccagctccgccacgtcgccc 13406400



to top

>gb|AY787762.1| Streptomyces filamentosus strain NRRL 11379 daptomycin biosynthetic
             gene cluster, partial sequence
          Length = 127559

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 127   cgacgacttcaccgtcaccgcc 148
             ||||||||||||||||||||||
Sbjct: 70142 cgacgacttcaccgtcaccgcc 70163



to top

>dbj|AP003447.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1619_F12
          Length = 133028

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 142   caccgccgccacggccgccaacgccg 167
             |||||||||||| |||||||||||||
Sbjct: 98119 caccgccgccaccgccgccaacgccg 98094



to top

>dbj|AP003445.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
            clone:OJ1029_F04
          Length = 141834

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 142  caccgccgccacggccgccaacgccg 167
            |||||||||||| |||||||||||||
Sbjct: 6503 caccgccgccaccgccgccaacgccg 6478



to top

>dbj|AP004111.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1058_F07
          Length = 95841

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 51    cggcgcccgcgctcaccgactc 72
             ||||||||||||||||||||||
Sbjct: 34101 cggcgcccgcgctcaccgactc 34080



to top

>dbj|AK104530.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A05, full
           insert sequence
          Length = 1071

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 166 cgtgccgctcggggaggcgaccgtgccggggttc 199
           |||||||||||||| |||| ||||||| ||||||
Sbjct: 511 cgtgccgctcggggtggcggccgtgcccgggttc 544



to top

>dbj|AK099322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033014L15, full
           insert sequence
          Length = 1096

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 166 cgtgccgctcggggaggcgaccgtgccggggttc 199
           |||||||||||||| |||| ||||||| ||||||
Sbjct: 524 cgtgccgctcggggtggcggccgtgcccgggttc 557



to top

>dbj|AK099159.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023074F15, full
           insert sequence
          Length = 1126

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 166 cgtgccgctcggggaggcgaccgtgccggggttc 199
           |||||||||||||| |||| ||||||| ||||||
Sbjct: 554 cgtgccgctcggggtggcggccgtgcccgggttc 587



to top

>dbj|AK061109.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-207-C07, full
           insert sequence
          Length = 1134

 Score = 44.1 bits (22), Expect = 0.35
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 166 cgtgccgctcggggaggcgaccgtgccggggttc 199
           |||||||||||||| |||| ||||||| ||||||
Sbjct: 556 cgtgccgctcggggtggcggccgtgcccgggttc 589



to top

>ref|XM_470137.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 703

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 129 acgacttcaccgtcaccgccgccacggcc 157
           ||||||||||||||| || ||||||||||
Sbjct: 308 acgacttcaccgtcagcgacgccacggcc 336



to top

>ref|XM_466892.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 444

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 136 caccgtcaccgccgccacggccgcc 160
           ||||| |||||||||||||||||||
Sbjct: 66  caccgccaccgccgccacggccgcc 42



to top

>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome
          Length = 3814139

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 138    ccgtcaccgccgccacggccgccaacgccgtgc 170
              ||||||||||||||||||| | | |||||||||
Sbjct: 824516 ccgtcaccgccgccacggcgggctacgccgtgc 824548



to top

>ref|XM_810025.1| Trypanosoma cruzi strain CL Brener dispersed gene family protein 1
            (DGF-1) (Tc00.1047053508523.40) partial mRNA
          Length = 10413

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                     
Query: 136  caccgtcaccgccgccacggccgcc 160
            |||||||||||||||||| ||||||
Sbjct: 4946 caccgtcaccgccgccaccgccgcc 4970



to top

>emb|Z85996.1|HS431A14 Human DNA sequence from clone RP3-431A14 on chromosome 6p21 Contains
             the CDKN1A gene for cyclin-dependent kinase inhibitor 1A,
             the gene for a novel protein similar to ras family
             protein, the gene for a novel copine-like protein
             (KIA1599), a galanin receptor pseudogene, the 3' end of
             the PPIL1 gene for peptidylprolyl isomerase protein and 2
             CpG islands, complete sequence
          Length = 195364

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 29    ctcagcctctccagctccgccacgg 53
             ||||||||||||||| |||||||||
Sbjct: 83795 ctcagcctctccagccccgccacgg 83819



to top

>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence
          Length = 3806533

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                            
Query: 148     cgccacggccgccaacgccgtgccgctcg 176
               |||||||||||||| ||||||| ||||||
Sbjct: 1332702 cgccacggccgccagcgccgtgacgctcg 1332730



 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 106    caagaagctcgtctacctgtacgacgact 134
              ||||||| |||||||||||||| ||||||
Sbjct: 294349 caagaagatcgtctacctgtaccacgact 294377



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 328     gaccaaggccggcgtcaagg 347
               ||||||||||||||||||||
Sbjct: 2533949 gaccaaggccggcgtcaagg 2533968



to top

>gb|DQ445513.1| Graphocephala atropunctata isolate WHGA0380 putative ferritin mRNA,
           complete cds
          Length = 633

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 315 ccctcgacctggagaccaagg 335
           |||||||||||||||||||||
Sbjct: 401 ccctcgacctggagaccaagg 421



to top

>gb|U59787.1| Asterocolax gardneri natural-host Polyneura latissima 18S ribosomal
            RNA gene, partial sequence; internal transcribed spacer
            1, 5.8S ribosomal RNA gene and internal transcribed
            spacer 2, complete sequence; and 25S ribosomal RNA gene,
            partial sequence
          Length = 1847

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  acatcaccgtcatcaaggcca 236
            |||||||||||||||||||||
Sbjct: 1693 acatcaccgtcatcaaggcca 1673



to top

>gb|U59786.1| Polyneura latissima 18S ribosomal RNA gene, partial sequence;
            internal transcribed spacer 1, 5.8S ribosomal RNA gene
            and internal transcribed spacer 2, complete sequence; and
            25S ribosomal RNA gene, partial sequence
          Length = 1842

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 216  acatcaccgtcatcaaggcca 236
            |||||||||||||||||||||
Sbjct: 1688 acatcaccgtcatcaaggcca 1668



to top

>gb|AC010068.8| Drosophila melanogaster 3L BAC RP98-15K24 (Roswell Park Cancer
             Institute Drosophila BAC Library) complete sequence
          Length = 178607

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 142   caccgccgccacggccgccaacgcc 166
             |||||||||||||||||||| ||||
Sbjct: 49974 caccgccgccacggccgccaccgcc 49950



to top

>dbj|AB249656.1| Oryza sativa (japonica cultivar-group) OsRR11 mRNA for typeA
           response regulator 11, complete cds
          Length = 444

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                    
Query: 136 caccgtcaccgccgccacggccgcc 160
           ||||| |||||||||||||||||||
Sbjct: 66  caccgccaccgccgccacggccgcc 42



to top

>ref|NM_168941.2| Drosophila melanogaster Nopp140 CG7421-RA, transcript variant A
            (Nopp140), mRNA
          Length = 3104

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 142  caccgccgccacggccgccaacgcc 166
            |||||||||||||||||||| ||||
Sbjct: 2142 caccgccgccacggccgccaccgcc 2118



to top

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
               sequence
          Length = 22696651

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 232     ggccaccgtctccgcggccgc 252
               |||||||||||||||||||||
Sbjct: 4952923 ggccaccgtctccgcggccgc 4952943



to top

>gb|AC133781.4| Homo sapiens BAC clone RP11-756K13 from 2, complete sequence
          Length = 185571

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 242    tccgcggccgcgctcggggtc 262
              |||||||||||||||||||||
Sbjct: 118598 tccgcggccgcgctcggggtc 118578



to top

>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete
             sequence
          Length = 163828

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 129   acgacttcaccgtcaccgccgccacggcc 157
             ||||||||||||||| || ||||||||||
Sbjct: 90888 acgacttcaccgtcagcgacgccacggcc 90916



to top

>gb|AC133528.4| Homo sapiens BAC clone RP11-367H1 from 2, complete sequence
          Length = 151700

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 242  tccgcggccgcgctcggggtc 262
            |||||||||||||||||||||
Sbjct: 9884 tccgcggccgcgctcggggtc 9904



to top

>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 142   caccgccgccacggccgccaacgcc 166
             |||||||||||| ||||||||||||
Sbjct: 91948 caccgccgccaccgccgccaacgcc 91972



to top

>gb|AC114730.5| Homo sapiens BAC clone RP13-925E23 from 2, complete sequence
          Length = 193894

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 242    tccgcggccgcgctcggggtc 262
              |||||||||||||||||||||
Sbjct: 146753 tccgcggccgcgctcggggtc 146773



to top

>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 245     gcggccgcgctcggggtcgac 265
               |||||||||||||||||||||
Sbjct: 4848151 gcggccgcgctcggggtcgac 4848131



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 239     gtctccgcggccgcgctcgg 258
               ||||||||||||||||||||
Sbjct: 5010432 gtctccgcggccgcgctcgg 5010451



 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 139     cgtcaccgccgccacggccgccaa 162
               ||||||||||||| ||||||||||
Sbjct: 4278504 cgtcaccgccgccgcggccgccaa 4278481



to top

>dbj|AP005903.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:B1012G11
          Length = 167168

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 232    ggccaccgtctccgcggccgc 252
              |||||||||||||||||||||
Sbjct: 135455 ggccaccgtctccgcggccgc 135475



to top

>dbj|AP006452.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1250G12
          Length = 144590

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 136   caccgtcaccgccgccacggccgcc 160
             ||||| |||||||||||||||||||
Sbjct: 73421 caccgccaccgccgccacggccgcc 73445



to top

>gb|BT021407.1| Drosophila melanogaster LD06749 full insert cDNA
          Length = 3072

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 142  caccgccgccacggccgccaacgcc 166
            |||||||||||||||||||| ||||
Sbjct: 2102 caccgccgccacggccgccaccgcc 2078



to top

>dbj|AK065862.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013044F03, full
           insert sequence
          Length = 3873

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 232 ggccaccgtctccgcggccgc 252
           |||||||||||||||||||||
Sbjct: 182 ggccaccgtctccgcggccgc 202



to top

>gb|AE003595.3| Drosophila melanogaster chromosome 3L, section 76 of 83 of the complete
              sequence
          Length = 294272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 142    caccgccgccacggccgccaacgcc 166
              |||||||||||||||||||| ||||
Sbjct: 255234 caccgccgccacggccgccaccgcc 255210



to top

>gb|AF162774.2| Drosophila melanogaster Nopp140-like nucleolar protein (Nopp140)
            mRNA, complete cds
          Length = 3028

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 142  caccgccgccacggccgccaacgcc 166
            |||||||||||||||||||| ||||
Sbjct: 2045 caccgccgccacggccgccaccgcc 2021



to top

>gb|L13083.1|LOLG9I Lolium perenne isoform 9 mRNA, complete cds
          Length = 1272

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 143 accgccgccacggccgccaacgccg 167
           ||||||||||| |||||||||||||
Sbjct: 622 accgccgccactgccgccaacgccg 646



to top

>gb|DQ231252.1| Oryza sativa (japonica cultivar-group) SNARE protein (SYP121) mRNA,
           complete cds
          Length = 1015

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  tccagctccgccacggcgcc 57
           ||||||||||||||||||||
Sbjct: 683 tccagctccgccacggcgcc 664



to top

>gb|AE010421.1| Methanopyrus kandleri AV19 section 120 of 157 of the complete genome
          Length = 12174

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 337  cggcgtcaaggtgggcgggctcaagacc 364
            |||||||||| ||| |||||||||||||
Sbjct: 9881 cggcgtcaagctggtcgggctcaagacc 9908



to top

>ref|XM_465319.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 435

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 35  ctctccagctccgccacggcgccc 58
           |||||||||||||||||| |||||
Sbjct: 286 ctctccagctccgccacgtcgccc 309



to top

>ref|XM_470368.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 690

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 35  ctctccagctccgccacggcgccc 58
           |||||||||||||||||| |||||
Sbjct: 396 ctctccagctccgccacgtcgccc 373



to top

>ref|NM_032329.4| Homo sapiens inhibitor of growth family, member 5 (ING5), mRNA
          Length = 5233

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 tccgcggccgcgctcggggt 261
           ||||||||||||||||||||
Sbjct: 20  tccgcggccgcgctcggggt 1



to top

>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome
          Length = 2584158

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 37      ctccagctccgccacggcgc 56
               ||||||||||||||||||||
Sbjct: 1732720 ctccagctccgccacggcgc 1732701



to top

>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete
             sequence
          Length = 145507

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 38    tccagctccgccacggcgcc 57
             ||||||||||||||||||||
Sbjct: 43738 tccagctccgccacggcgcc 43719



to top

>ref|XM_954389.1| Neurospora crassa OR74A hypothetical protein (NCU02319.1) partial
            mRNA
          Length = 3180

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ccccaacaagaagctcgtct 119
            ||||||||||||||||||||
Sbjct: 1089 ccccaacaagaagctcgtct 1108



to top

>ref|XM_331094.1| Neurospora crassa OR74A hypothetical protein (NCU02319.1) partial
            mRNA
          Length = 3180

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 100  ccccaacaagaagctcgtct 119
            ||||||||||||||||||||
Sbjct: 1089 ccccaacaagaagctcgtct 1108



to top

>gb|AY257538.1| Pseudomonas aeruginosa strain C plasmid pKLC102, complete sequence
          Length = 103532

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 114   tcgtctacctgtacgacgacttca 137
             |||||| |||||||||||||||||
Sbjct: 63398 tcgtctgcctgtacgacgacttca 63421



to top

>ref|XM_801490.1| Trypanosoma cruzi strain CL Brener hypothetical protein
            (Tc00.1047053510771.9) partial mRNA
          Length = 10937

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 134  ttcaccgtcaccgccgccac 153
            ||||||||||||||||||||
Sbjct: 8055 ttcaccgtcaccgccgccac 8036



to top

>emb|BX057456.1|CNS09GHW Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 3-PRIME end of
           clone FK0AAC37BF11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 746

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 142 caccgccgccacggccgcca 161
           ||||||||||||||||||||
Sbjct: 619 caccgccgccacggccgcca 638



to top

>emb|BX045614.1|CNS097CY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC19DD12 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 872

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 142 caccgccgccacggccgcca 161
           ||||||||||||||||||||
Sbjct: 661 caccgccgccacggccgcca 642



to top

>gb|AF170880.3| Streptomyces spheroides novobiocin biosynthetic gene cluster, complete
             sequence
          Length = 25617

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   tcgccatcaccctcgacctg 325
             ||||||||||||||||||||
Sbjct: 19687 tcgccatcaccctcgacctg 19706



to top

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 131   gacttcaccgtcaccgccgccacggccg 158
             |||||||||||| |||||||| ||||||
Sbjct: 68732 gacttcaccgtccccgccgccgcggccg 68759



to top

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 154     ggccgccaacgccgtgccgc 173
               ||||||||||||||||||||
Sbjct: 1726032 ggccgccaacgccgtgccgc 1726051



to top

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 47      gccacggcgcccgcgctcac 66
               ||||||||||||||||||||
Sbjct: 3922310 gccacggcgcccgcgctcac 3922329



to top

>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 123      tgtacgacgacttcaccgtc 142
                ||||||||||||||||||||
Sbjct: 24587373 tgtacgacgacttcaccgtc 24587354



to top

>gb|AC008354.3|AC008354 Drosophila melanogaster, chromosome 2L, region 28A-28A, BAC clone
             BACR30I17, complete sequence
          Length = 159350

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 63    tcaccgactccatcgacttc 82
             ||||||||||||||||||||
Sbjct: 66574 tcaccgactccatcgacttc 66593



to top

>emb|BX935052.1| Gallus gallus finished cDNA, clone ChEST74o12
          Length = 652

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 136 caccgtcaccgccgccacggccgccaacgccg 167
           ||||| |||||||||||| ||||||| |||||
Sbjct: 143 caccgccaccgccgccaccgccgccaccgccg 112



to top

>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 247     ggccgcgctcggggtcgacc 266
               ||||||||||||||||||||
Sbjct: 3824498 ggccgcgctcggggtcgacc 3824479



to top

>gb|AC104487.3| Oryza sativa chromosome 3 BAC OSJNBa0042I09 genomic sequence, complete
             sequence
          Length = 171376

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 35    ctctccagctccgccacggcgccc 58
             |||||||||||||||||| |||||
Sbjct: 27297 ctctccagctccgccacgtcgccc 27320



to top

>gb|AF329398.1| Streptomyces roseochromogenes subsp. oscitans clorobiocin biosynthetic
             gene cluster, complete sequence
          Length = 42291

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 306   tcgccatcaccctcgacctg 325
             ||||||||||||||||||||
Sbjct: 32478 tcgccatcaccctcgacctg 32497



to top

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 241     ctccgcggccgcgctcggggtcga 264
               ||||||||||||| ||||||||||
Sbjct: 1708080 ctccgcggccgcgatcggggtcga 1708057



to top

>dbj|AP003539.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0040H10
          Length = 173301

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 123   tgtacgacgacttcaccgtc 142
             ||||||||||||||||||||
Sbjct: 70566 tgtacgacgacttcaccgtc 70547



to top

>dbj|AP004854.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
              clone:OJ1521_G01
          Length = 144102

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 35     ctctccagctccgccacggcgccc 58
              |||||||||||||||||| |||||
Sbjct: 131674 ctctccagctccgccacgtcgccc 131651



to top

>dbj|AK119871.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-D02, full
           insert sequence
          Length = 2340

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                           
Query: 136 caccgtcaccgccgccacggccgccaacgccg 167
           ||||| |||||||||||| ||||||| |||||
Sbjct: 580 caccgccaccgccgccaccgccgccaccgccg 549



to top

>dbj|AK074422.1| Homo sapiens cDNA FLJ23842 fis, clone KAT05909
          Length = 1757

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 242 tccgcggccgcgctcggggt 261
           ||||||||||||||||||||
Sbjct: 20  tccgcggccgcgctcggggt 1



to top

>gb|AE001439.1| Helicobacter pylori J99, complete genome
          Length = 1643831

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 160    caacgccgtgccgctcgggg 179
              ||||||||||||||||||||
Sbjct: 499607 caacgccgtgccgctcgggg 499588



to top

>dbj|AK065950.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049M07, full
           insert sequence
          Length = 1206

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 38  tccagctccgccacggcgcc 57
           ||||||||||||||||||||
Sbjct: 725 tccagctccgccacggcgcc 706



to top

>gb|AY913105.1| Uncultured forest soil bacterium clone DUNnos233 nitrous oxide
           reductase (nosZ) gene, partial cds
          Length = 660

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 127 cgacgacttcaccgtcaccg 146
           ||||||||||||||||||||
Sbjct: 471 cgacgacttcaccgtcaccg 490



to top

>gb|AE003617.3| Drosophila melanogaster chromosome 2L, section 26 of 83 of the complete
              sequence
          Length = 257317

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 63     tcaccgactccatcgacttc 82
              ||||||||||||||||||||
Sbjct: 159672 tcaccgactccatcgacttc 159691



to top

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 146     gccgccacggccgccaacgccgtg 169
               |||||||| |||||||||||||||
Sbjct: 1924543 gccgccaccgccgccaacgccgtg 1924520



to top

>emb|AL939130.1|SCO939130 Streptomyces coelicolor A3(2) complete genome; segment 27/29
          Length = 303450

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 126   acgacgacttcaccgtcacc 145
             ||||||||||||||||||||
Sbjct: 20957 acgacgacttcaccgtcacc 20976



to top

>gb|AF016696.1| Streptomyces fradiae peptide synthetase module (cps-1) gene, partial
            cds
          Length = 3973

 Score = 40.1 bits (20), Expect = 5.4
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 131  gacttcaccgtcaccgccgccacggccg 158
            |||||||||||| |||||||| ||||||
Sbjct: 2986 gacttcaccgtccccgccgccgcggccg 3013


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,723,520
Number of Sequences: 3902068
Number of extensions: 2723520
Number of successful extensions: 73781
Number of sequences better than 10.0: 89
Number of HSP's better than 10.0 without gapping: 100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70991
Number of HSP's gapped (non-prelim): 2780
length of query: 404
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 382
effective length of database: 17,147,199,772
effective search space: 6550230312904
effective search space used: 6550230312904
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top