| Clone Name | baet90h08 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_185363.1| Oryza sativa (japonica cultivar-group), mRNA Length = 675 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Plus Query: 143 ggctgctcctcaacctgctcttcctgctcggccacctgcgccgcctctcctcatggctgc 202 ||||||| ||| |||| |||||||| ||| |||||| |||||||||||||| || |||| Sbjct: 245 ggctgctgctccacctcctcttcctcctcacccacctccgccgcctctcctcctgcctgc 304 Query: 203 tccgcctcgtcggcgccg 220 ||||||||| |||||||| Sbjct: 305 tccgcctcgccggcgccg 322
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 143 ggctgctcctcaacctgctcttcctgctcggccacctgcgccgcctctcctcatggctgc 202 ||||||| ||| |||| |||||||| ||| |||||| |||||||||||||| || |||| Sbjct: 534568 ggctgctgctccacctcctcttcctcctcacccacctccgccgcctctcctcctgcctgc 534509 Query: 203 tccgcctcgtcggcgccg 220 ||||||||| |||||||| Sbjct: 534508 tccgcctcgccggcgccg 534491
>dbj|AP002805.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0004I20 Length = 94135 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 143 ggctgctcctcaacctgctcttcctgctcggccacctgcgccgcctctcctcatggctgc 202 ||||||| ||| |||| |||||||| ||| |||||| |||||||||||||| || |||| Sbjct: 11185 ggctgctgctccacctcctcttcctcctcacccacctccgccgcctctcctcctgcctgc 11126 Query: 203 tccgcctcgtcggcgccg 220 ||||||||| |||||||| Sbjct: 11125 tccgcctcgccggcgccg 11108
>dbj|AP000616.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0514G12 Length = 138929 Score = 75.8 bits (38), Expect = 1e-10 Identities = 68/78 (87%) Strand = Plus / Minus Query: 143 ggctgctcctcaacctgctcttcctgctcggccacctgcgccgcctctcctcatggctgc 202 ||||||| ||| |||| |||||||| ||| |||||| |||||||||||||| || |||| Sbjct: 80076 ggctgctgctccacctcctcttcctcctcacccacctccgccgcctctcctcctgcctgc 80017 Query: 203 tccgcctcgtcggcgccg 220 ||||||||| |||||||| Sbjct: 80016 tccgcctcgccggcgccg 79999
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaa 95 ||||||||||||||||||||||| Sbjct: 14737242 agagagcgagagcgagagatcaa 14737220 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 16918696 ggcgccggcgtcgaccaagacc 16918717
>gb|AC084766.8| Oryza sativa chromosome 3 BAC OSJNBb0048D20 genomic sequence, complete sequence Length = 130306 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaa 95 ||||||||||||||||||||||| Sbjct: 76154 agagagcgagagcgagagatcaa 76132
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaa 95 ||||||||||||||||||||||| Sbjct: 14731776 agagagcgagagcgagagatcaa 14731754 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 16912269 ggcgccggcgtcgaccaagacc 16912290
>dbj|AB072893.1| Penicillium citrinum ML-236B (compactin) biosynthetic gene cluster (mlcH, mlcG, mlcF, mlcA, mlcC, mlcB, mlcD, mlcE, mlcR), complete cds Length = 38231 Score = 46.1 bits (23), Expect = 0.092 Identities = 23/23 (100%) Strand = Plus / Minus Query: 74 gagagcgagagcgagagatcaat 96 ||||||||||||||||||||||| Sbjct: 2184 gagagcgagagcgagagatcaat 2162
>ref|XM_507061.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1119_A01.20-1 patrial mRNA Length = 3178 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 gctgctccgcctcgtcggcgccggcgtcga 227 ||||||||||||||||| ||||| |||||| Sbjct: 240 gctgctccgcctcgtcgtcgccgtcgtcga 269
>ref|XM_450955.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1074 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 ctgcgcggtgtgcctcggcgacttcc 421 ||||||||||||||||||||| |||| Sbjct: 468 ctgcgcggtgtgcctcggcgagttcc 493
>ref|XM_476828.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1860 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 1416 ggcgccggcgtcgaccaagacc 1437
>gb|AC120529.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0039N21, complete sequence Length = 151732 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 61700 ggcgccggcgtcgaccaagacc 61721
>gb|CP000080.1| Leishmania major strain Friedlin chromosome 29, complete sequence Length = 1212674 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 613440 accaccaccatcagcaccacgg 613461
>ref|NM_131844.1| Danio rerio v-maf musculoaponeurotic fibrosarcoma (avian) oncogene homolog (maf), mRNA Length = 2847 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 825 accaccaccatcaccaccacggccac 850
>ref|NM_131845.1| Danio rerio v-maf musculoaponeurotic fibrosarcoma (avian) oncogene family, protein L (mafl), mRNA Length = 2928 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 1483 accaccaccatcatcaccacggccac 1508
>gb|BC065941.1| Danio rerio v-maf musculoaponeurotic fibrosarcoma (avian) oncogene homolog, mRNA (cDNA clone MGC:76816 IMAGE:6968258), complete cds Length = 3046 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 918 accaccaccatcaccaccacggccac 943
>gb|AY050632.1| Homo sapiens neuronal protein isoform B mRNA, complete cds Length = 4163 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 318 accaccaccatcagcaccacgg 339
>gb|AY050631.1| Homo sapiens neuronal protein isoform a mRNA, complete cds Length = 3245 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 318 accaccaccatcagcaccacgg 339
>emb|AL138704.12| Human DNA sequence from clone RP11-417C20 on chromosome 13 Contains the 5' end of gene KIAA1016 and a CpG island, complete sequence Length = 165120 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 5244 accaccaccatcagcaccacgg 5265
>emb|CR860239.1| Pongo pygmaeus mRNA; cDNA DKFZp469L2019 (from clone DKFZp469L2019) Length = 2883 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 191 accaccaccatcagcaccacgg 212
>ref|NM_015116.1| Homo sapiens leucine-rich repeats and calponin homology (CH) domain containing 1 (LRCH1), mRNA Length = 4163 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 318 accaccaccatcagcaccacgg 339
>emb|BX470204.13| Zebrafish DNA sequence from clone CH211-63C23 in linkage group 10, complete sequence Length = 185190 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 19131 accaccaccatcatcaccacggccac 19106
>gb|BC112937.1| Homo sapiens cDNA clone MGC:131868 IMAGE:5204613, complete cds Length = 3222 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 237 accaccaccatcagcaccacgg 258
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 gctgcgcggtgtgcctcggcga 416 |||||||||||||||||||||| Sbjct: 26458517 gctgcgcggtgtgcctcggcga 26458538
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 ctgcgcggtgtgcctcggcgacttcc 421 ||||||||||||||||||||| |||| Sbjct: 17779717 ctgcgcggtgtgcctcggcgagttcc 17779692
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 4103410 ggcgccggcgtcgaccaagacc 4103389
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 gctgctccgcctcgtcggcgccggcgtcga 227 ||||||||||||||||| ||||| |||||| Sbjct: 35331847 gctgctccgcctcgtcgtcgccgtcgtcga 35331818 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 atggctgctccgcctcgtcggcgccggcg 223 |||||| |||||||||||||||| ||||| Sbjct: 14051020 atggcttctccgcctcgtcggcggcggcg 14050992 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tgcgcggtgtgcctcggcga 416 |||||||||||||||||||| Sbjct: 8366631 tgcgcggtgtgcctcggcga 8366612
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 gctgctccgcctcgtcggcgccggcgtcga 227 ||||||||||||||||| ||||| |||||| Sbjct: 82181 gctgctccgcctcgtcgtcgccgtcgtcga 82152
>dbj|AP004307.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534H07 Length = 144689 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 214 ggcgccggcgtcgaccaagacc 235 |||||||||||||||||||||| Sbjct: 96268 ggcgccggcgtcgaccaagacc 96247
>dbj|AP005574.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1595_D08 Length = 116351 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 ctgcgcggtgtgcctcggcgacttcc 421 ||||||||||||||||||||| |||| Sbjct: 20361 ctgcgcggtgtgcctcggcgagttcc 20336
>dbj|AP005399.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0676H02 Length = 144252 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Minus Query: 396 ctgcgcggtgtgcctcggcgacttcc 421 ||||||||||||||||||||| |||| Sbjct: 88351 ctgcgcggtgtgcctcggcgagttcc 88326
>ref|XM_557691.1| Anopheles gambiae str. PEST ENSANGP00000028739 (ENSANGG00000022218), partial mRNA Length = 912 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 gccggagggctgcgcggtgtgc 408 |||||||||||||||||||||| Sbjct: 394 gccggagggctgcgcggtgtgc 415
>ref|XM_307614.2| Anopheles gambiae str. PEST ENSANGP00000016278 (ENSANGG00000013789), partial mRNA Length = 1227 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 387 gccggagggctgcgcggtgtgc 408 |||||||||||||||||||||| Sbjct: 394 gccggagggctgcgcggtgtgc 415
>dbj|AK072145.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013123O13, full insert sequence Length = 3452 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 gctgctccgcctcgtcggcgccggcgtcga 227 ||||||||||||||||| ||||| |||||| Sbjct: 239 gctgctccgcctcgtcgtcgccgtcgtcga 268
>dbj|AK065905.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013046I17, full insert sequence Length = 1514 Score = 44.1 bits (22), Expect = 0.37 Identities = 28/30 (93%) Strand = Plus / Plus Query: 198 gctgctccgcctcgtcggcgccggcgtcga 227 ||||||||||||||||| ||||| |||||| Sbjct: 257 gctgctccgcctcgtcgtcgccgtcgtcga 286
>dbj|AK064102.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-A07, full insert sequence Length = 1722 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 396 ctgcgcggtgtgcctcggcgacttcc 421 ||||||||||||||||||||| |||| Sbjct: 840 ctgcgcggtgtgcctcggcgagttcc 865
>gb|AF109781.1|AF109781 Danio rerio basic domain leucine zipper transcription factor (maf) mRNA, complete cds Length = 2847 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 825 accaccaccatcaccaccacggccac 850
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 395 gctgcgcggtgtgcctcggcga 416 |||||||||||||||||||||| Sbjct: 26386686 gctgcgcggtgtgcctcggcga 26386707
>emb|AL732532.4|CNS08C97 Oryza sativa chromosome 12, . BAC OSJNBa0027I07 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 146366 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Minus Query: 395 gctgcgcggtgtgcctcggcga 416 |||||||||||||||||||||| Sbjct: 83559 gctgcgcggtgtgcctcggcga 83538
>dbj|AP006373.1| Lotus japonicus genomic DNA, chromosome 3, clone:LjT09C16, TM0217, complete sequence Length = 79116 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 |||| ||||||||||||||||||||| Sbjct: 62855 accatcaccatcagcaccacggccac 62880
>dbj|AB006324.2| Danio rerio mRNA for transcription factor SMaf1, complete cds Length = 2950 Score = 44.1 bits (22), Expect = 0.37 Identities = 25/26 (96%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccac 297 ||||||||||||| |||||||||||| Sbjct: 1483 accaccaccatcatcaccacggccac 1508
>dbj|AB023233.1| Homo sapiens mRNA for KIAA1016 protein, partial cds Length = 4131 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacgg 293 |||||||||||||||||||||| Sbjct: 286 accaccaccatcagcaccacgg 307
>ref|XM_523450.1| PREDICTED: Pan troglodytes forkhead box C2 (LOC468058), mRNA Length = 2145 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 1797 ccaccaccaccagcaccacggccac 1821
>gb|AC135601.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0051D22, complete sequence Length = 119919 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 94295 agagagcgagagcgagagatc 94275
>gb|AC135596.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0032D10 map E20933S, complete sequence Length = 146118 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 130477 agagagcgagagcgagagatc 130497
>gb|AC108224.6| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0038F07, complete sequence Length = 175703 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 109734 agagagcgagagcgagagatc 109714
>ref|XM_880079.1| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 3 (LOC505336), mRNA Length = 3933 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gctcttcctgctcggccacct 179 ||||||||||||||||||||| Sbjct: 715 gctcttcctgctcggccacct 695
>ref|XM_581611.2| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 1 (LOC505336), mRNA Length = 4104 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gctcttcctgctcggccacct 179 ||||||||||||||||||||| Sbjct: 886 gctcttcctgctcggccacct 866
>ref|XM_880030.1| PREDICTED: Bos taurus similar to epsin 2 isoform b, transcript variant 2 (LOC505336), mRNA Length = 4101 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 159 gctcttcctgctcggccacct 179 ||||||||||||||||||||| Sbjct: 883 gctcttcctgctcggccacct 863
>ref|NM_005251.1| Homo sapiens forkhead box C2 (MFH-1, mesenchyme forkhead 1) (FOXC2), mRNA Length = 1506 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 1158 ccaccaccaccagcaccacggccac 1182
>gb|BC111589.1| Homo sapiens forkhead box C2 (MFH-1, mesenchyme forkhead 1), mRNA (cDNA clone MGC:133417 IMAGE:40080554), complete cds, with stop codon, in Gateway system Length = 1560 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 1188 ccaccaccaccagcaccacggccac 1212
>gb|CP000125.1| Burkholderia pseudomallei 1710b chromosome II, complete sequence Length = 3181762 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 2993943 gtcggcgccggcgtcgaccaa 2993963
>gb|AC009108.10| Homo sapiens chromosome 16 clone RP11-463O9, complete sequence Length = 168656 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Minus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 75343 ccaccaccaccagcaccacggccac 75319
>ref|XM_546791.2| PREDICTED: Canis familiaris similar to Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14), transcript variant 1 (LOC489671), mRNA Length = 1475 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 1193 ccaccaccaccagcaccacggccac 1217
>ref|XM_855855.1| PREDICTED: Canis familiaris similar to Forkhead box protein C2 (Forkhead-related protein FKHL14) (Mesenchyme fork head protein 1) (MFH-1 protein) (Transcription factor FKH-14), transcript variant 4 (LOC489671), mRNA Length = 1553 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 1193 ccaccaccaccagcaccacggccac 1217
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 266 tcgccgaccaccaccatcagc 286 ||||||||||||||||||||| Sbjct: 1999342 tcgccgaccaccaccatcagc 1999322
>gb|AY312417.1| Burkholderia thailandensis outer membrane porin precursor (omp38) gene, partial cds Length = 1122 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 157 gtcggcgccggcgtcgaccaa 177
>gb|AY312416.1| Burkholderia pseudomallei outer membrane porin precursor (omp38) gene, partial cds Length = 1122 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 157 gtcggcgccggcgtcgaccaa 177
>emb|BX062012.1|CNS09K0G Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC43AD07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 1102 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 156 cctgctcttcctgctcggcca 176 ||||||||||||||||||||| Sbjct: 945 cctgctcttcctgctcggcca 925
>emb|BX571966.1| Burkholderia pseudomallei strain K96243, chromosome 2, complete sequence Length = 3173005 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 1172703 gtcggcgccggcgtcgaccaa 1172723
>emb|Y08223.1|HSMFH1 H.sapiens MFH-1 gene Length = 3289 Score = 42.1 bits (21), Expect = 1.4 Identities = 24/25 (96%) Strand = Plus / Plus Query: 273 ccaccaccatcagcaccacggccac 297 ||||||||| ||||||||||||||| Sbjct: 2354 ccaccaccaccagcaccacggccac 2378
>ref|NM_141610.1| Drosophila melanogaster CG11997-RA (CG11997), mRNA Length = 1254 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 340 gacgcgctctccgctgcttcc 360 ||||||||||||||||||||| Sbjct: 132 gacgcgctctccgctgcttcc 112
>gb|AC099561.2| Homo sapiens chromosome 1 clone RP11-193H16, complete sequence Length = 163453 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 66398 agagagcgagagcgagagatc 66378
>ref|XM_695267.1| PREDICTED: Danio rerio similar to filamin A interacting protein 1 (LOC571659), partial mRNA Length = 2832 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 2 cctcctcctctaggaatctct 22 ||||||||||||||||||||| Sbjct: 2332 cctcctcctctaggaatctct 2312
>gb|CP000011.2| Burkholderia mallei ATCC 23344 chromosome 2, complete sequence Length = 2325379 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 1455252 gtcggcgccggcgtcgaccaa 1455232
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cctcgtcggcgccggcgtcga 227 ||||||||||||||||||||| Sbjct: 1696212 cctcgtcggcgccggcgtcga 1696232
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 19391183 agagagcgagagcgagagatc 19391163 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 10506631 agagagcgagagcgagagatc 10506651
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cctcgtcggcgccggcgtcga 227 ||||||||||||||||||||| Sbjct: 22709141 cctcgtcggcgccggcgtcga 22709161 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cggcgccggcgtcgaccaag 232 |||||||||||||||||||| Sbjct: 11261145 cggcgccggcgtcgaccaag 11261164
>gb|U82694.2| Homo sapiens chromosome X multiple clones map q28, complete sequence Length = 75276 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 150 cctcaacctgctcttcctgct 170 ||||||||||||||||||||| Sbjct: 17687 cctcaacctgctcttcctgct 17707
>dbj|AP004136.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1287_H05 Length = 97812 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Minus Query: 195 atggctgctccgcctcgtcggcgccggcg 223 |||||| |||||||||||||||| ||||| Sbjct: 32530 atggcttctccgcctcgtcggcggcggcg 32502
>dbj|AP005871.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1116H04 Length = 140142 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cctcgtcggcgccggcgtcga 227 ||||||||||||||||||||| Sbjct: 35783 cctcgtcggcgccggcgtcga 35803
>dbj|AP005405.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1111C03 Length = 144879 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 207 cctcgtcggcgccggcgtcga 227 ||||||||||||||||||||| Sbjct: 77935 cctcgtcggcgccggcgtcga 77955
>gb|AC005477.1|AC005477 Homo sapiens PAC clone RP1-283M22 from 14, complete sequence Length = 106260 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 33 agctctgttcagcttcttgat 53 ||||||||||||||||||||| Sbjct: 69855 agctctgttcagcttcttgat 69835
>dbj|AK065640.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013038P06, full insert sequence Length = 2191 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 atggctgctccgcctcgtcggcgccggcg 223 |||||| |||||||||||||||| ||||| Sbjct: 384 atggcttctccgcctcgtcggcggcggcg 412
>gb|AY900120.1| Oryza sativa (japonica cultivar-group) SNAP1 (SNAP1) mRNA, complete cds Length = 1014 Score = 42.1 bits (21), Expect = 1.4 Identities = 27/29 (93%) Strand = Plus / Plus Query: 195 atggctgctccgcctcgtcggcgccggcg 223 |||||| |||||||||||||||| ||||| Sbjct: 163 atggcttctccgcctcgtcggcggcggcg 191
>emb|CT009557.4| Pan troglodytes chromosome X clone PTB-010G23 map Xq28, complete sequence Length = 244504 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 150 cctcaacctgctcttcctgct 170 ||||||||||||||||||||| Sbjct: 74579 cctcaacctgctcttcctgct 74559
>gb|CP000085.1| Burkholderia thailandensis E264 chromosome II, complete sequence Length = 2914771 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 211 gtcggcgccggcgtcgaccaa 231 ||||||||||||||||||||| Sbjct: 1786802 gtcggcgccggcgtcgaccaa 1786782
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 147 gctcctcaacctgctcttcct 167 ||||||||||||||||||||| Sbjct: 723173 gctcctcaacctgctcttcct 723193 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tcctgctcggccacctgcgc 183 |||||||||||||||||||| Sbjct: 2055653 tcctgctcggccacctgcgc 2055672
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 19550732 agagagcgagagcgagagatc 19550712 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagatc 93 ||||||||||||||||||||| Sbjct: 10578175 agagagcgagagcgagagatc 10578195
>gb|AC087431.3| Homo sapiens chromosome 3 clone RP11-775C23 map 3p, complete sequence Length = 196745 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 148 ctcctcaacctgctcttcctg 168 ||||||||||||||||||||| Sbjct: 114666 ctcctcaacctgctcttcctg 114646
>ref|NM_120476.3| Arabidopsis thaliana FFC (FIFTY-FOUR CHLOROPLAST HOMOLOGUE); 7S RNA binding / GTP binding / mRNA binding AT5G03940 (FFC) mRNA, complete cds Length = 2518 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 189 tcctcctctaggaatctctc 208
>ref|NM_189657.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1398 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cctcgtcggcgccggcgtcgacca 230 ||||| |||||||||||||||||| Sbjct: 868 cctcggcggcgccggcgtcgacca 845
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 164 tcctgctcggccacctgcgc 183 |||||||||||||||||||| Sbjct: 168121 tcctgctcggccacctgcgc 168140
>ref|XM_629903.1| Dictyostelium discoideum hypothetical protein (DDB0184128), partial mRNA Length = 3711 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 2310 accaccaccatcagcaccac 2329
>gb|AC007441.9| Drosophila melanogaster clone BACR10E03, complete sequence Length = 195212 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gaccaccaccatcagcacca 290 |||||||||||||||||||| Sbjct: 18261 gaccaccaccatcagcacca 18280
>ref|XM_481282.1| Oryza sativa (japonica cultivar-group), mRNA Length = 438 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 cggcgccggcgtcgaccaag 232 |||||||||||||||||||| Sbjct: 140 cggcgccggcgtcgaccaag 121
>ref|XM_464816.1| Oryza sativa (japonica cultivar-group), mRNA Length = 636 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 397 tgcgcggtgtgcctcggcga 416 |||||||||||||||||||| Sbjct: 457 tgcgcggtgtgcctcggcga 476
>gb|AC165151.2| Mus musculus BAC clone RP24-77O15 from chromosome 16, complete sequence Length = 177446 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 35302 accaccaccatcagcaccac 35283
>ref|XM_526829.1| PREDICTED: Pan troglodytes similar to a disintegrin-like and metalloprotease (reprolysin type) with thrombospondin type 1 motif, 16 preproprotein (LOC471451), mRNA Length = 3672 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 73 cctgctcggccacctgcgcc 54
>ref|NM_205383.1| Gallus gallus syndecan 3 (N-syndecan) (SDC3), mRNA Length = 1372 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 522 accaccaccatcagcaccac 541
>gb|AY652953.1| Lyngbya majuscula strain 19L curacin biosynthesis gene cluster, complete sequence Length = 87427 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 267 cgccgaccaccaccatcagcacca 290 |||||| ||||||||||||||||| Sbjct: 83179 cgccgagcaccaccatcagcacca 83156
>gb|AC102240.12| Mus musculus chromosome 18, clone RP24-122C12, complete sequence Length = 172481 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 20908 accaccaccatcagcaccac 20927
>gb|AC117803.12| Mus musculus chromosome 17, clone RP24-562I11, complete sequence Length = 168136 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 17866 accaccaccatcagcaccac 17885
>gb|AF114171.1| Sorghum bicolor BAC clone 25.M18, complete sequence Length = 183990 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccacggccacgg 299 |||||||||| || |||||||||||||| Sbjct: 134804 accaccaccaccaccaccacggccacgg 134831
>gb|AY020091.1| Oryza sativa microsatellite MRG2416 containing (CT)X17, genomic sequence Length = 234 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 68 caagtagagagcgagagcgagaga 91 ||||||||||| |||||||||||| Sbjct: 164 caagtagagagagagagcgagaga 141
>gb|AC157938.9| Mus musculus chromosome 5, clone RP23-307P18, complete sequence Length = 188926 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaat 96 |||||| ||||||||||||||||| Sbjct: 154488 agagagagagagcgagagatcaat 154465
>gb|AC166817.3| Mus musculus BAC clone RP24-530C16 from chromosome 10, complete sequence Length = 155876 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 80452 gctcggccacctgcgccgcc 80471
>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome Length = 4403837 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcagcaccacggccacgg 299 |||||||||||||||||||| Sbjct: 3056618 catcagcaccacggccacgg 3056637
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 197603 accaccaccatcagcaccac 197584
>gb|AC035247.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-108D4, complete sequence Length = 204935 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 19251 accaccaccatcagcaccac 19232
>ref|XM_429170.1| PREDICTED: Gallus gallus similar to p53-binding protein-3 (LOC431618), mRNA Length = 1398 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gctgctgccggagggctgcg 400 |||||||||||||||||||| Sbjct: 1128 gctgctgccggagggctgcg 1109
>ref|XM_429169.1| PREDICTED: Gallus gallus similar to p53-binding protein-3 (LOC431617), mRNA Length = 1377 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 381 gctgctgccggagggctgcg 400 |||||||||||||||||||| Sbjct: 1128 gctgctgccggagggctgcg 1109
>ref|NM_139056.1| Homo sapiens ADAM metallopeptidase with thrombospondin type 1 motif, 16 (ADAMTS16), mRNA Length = 3227 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 73 cctgctcggccacctgcgcc 54
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome Length = 3696649 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 276 ccaccatcagcaccacggccacgg 299 ||||||||||||||| |||||||| Sbjct: 1212707 ccaccatcagcaccagggccacgg 1212684
>gb|BC048415.1| Mus musculus bromodomain adjacent to zinc finger domain, 2A, mRNA (cDNA clone IMAGE:6491361), partial cds Length = 2282 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 21 gctcggccacctgcgccgcc 40
>gb|AC132307.5| Mus musculus BAC clone RP24-291H9 from chromosome 18, complete sequence Length = 179465 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 173675 accaccaccatcagcaccac 173694
>gb|AC115890.8| Mus musculus chromosome 6, clone RP24-421B23, complete sequence Length = 191709 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 107216 accaccaccatcagcaccac 107197
>gb|AC116107.10| Mus musculus chromosome 1, clone RP23-28F18, complete sequence Length = 262581 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 132534 agagagcgagagcgagagat 132553
>gb|AC119968.9| Mus musculus chromosome 8, clone RP24-473C10, complete sequence Length = 202850 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaatacaa 100 |||||| ||||| ||||||||||||||| Sbjct: 111275 agagagagagagagagagatcaatacaa 111248
>gb|AC153530.9| Mus musculus 10 BAC RP23-202A18 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 192392 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 170656 accaccaccatcagcaccac 170675
>gb|AC157650.2| Mus musculus BAC clone RP24-573N21 from chromosome 14, complete sequence Length = 186859 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 106621 accaccaccatcagcaccac 106640
>ref|XM_925022.2| PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 5 (Gm1752), mRNA Length = 3208 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 598 accaccaccatcagcaccac 579
>ref|XM_925019.2| PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 4 (Gm1752), mRNA Length = 2242 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 307 accaccaccatcagcaccac 288
>ref|XM_001003685.1| PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 2 (Gm1752), mRNA Length = 3208 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 598 accaccaccatcagcaccac 579
>ref|XM_001003678.1| PREDICTED: Mus musculus gene model 1752, (NCBI), transcript variant 1 (Gm1752), mRNA Length = 2242 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 307 accaccaccatcagcaccac 288
>gb|AC004931.1| Homo sapiens PAC clone RP5-922I23 from 7, complete sequence Length = 145844 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 32544 accaccaccatcagcaccac 32563
>emb|BX248343.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 10/14 Length = 307550 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcagcaccacggccacgg 299 |||||||||||||||||||| Sbjct: 200969 catcagcaccacggccacgg 200988
>gb|AC123811.3| Mus musculus BAC clone RP24-179L19 from chromosome 9, complete sequence Length = 204171 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 78864 accaccaccatcagcaccac 78845
>gb|BT000976.1| Arabidopsis thaliana clone U10271 putative signal recognition particle 54CP protein precursor (At5g03940) mRNA, complete cds Length = 1726 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 127 tcctcctctaggaatctctc 146
>gb|AC127331.4| Mus musculus BAC clone RP23-127A19 from 18, complete sequence Length = 179177 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 166423 accaccaccatcagcaccac 166404
>gb|AC100209.13| Mus musculus chromosome 13, clone RP23-59L9, complete sequence Length = 215769 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 69588 accaccaccatcagcaccac 69607
>emb|AL590677.7| Human DNA sequence from clone RP11-214D15 on chromosome 10 Contains the 5' end of the gene for a novel protein (FLJ40283), a novel gene and two CpG islands, complete sequence Length = 127714 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 91017 accaccaccatcagcaccac 90998
>emb|AL513343.22| Human DNA sequence from clone RP11-90O23 on chromosome 1 Contains the 5' end of the ATP2B4 gene for ATPase Ca++ transporting plasma membrane 4 and a TGF beta-inducible nuclear protein 1 (TINP1) pseudogene, complete sequence Length = 147676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 381 gctgctgccggagggctgcg 400 |||||||||||||||||||| Sbjct: 128821 gctgctgccggagggctgcg 128840
>emb|AL445309.13| Human DNA sequence from clone RP11-506K6 on chromosome 6 Contains the gene for a novel protein similar to tubulin beta polypeptide TUBB, a novel gene, the 3' end of the gene for the possible ortholog of rat ion transporter protein (NRITP) and five CpG islands, complete sequence Length = 136587 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 10077 accaccaccatcagcaccac 10096
>ref|XM_501133.1| Yarrowia lipolytica CLIB122, YALI0B20372g predicted mRNA Length = 1467 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccacggccacggtctcgacg 307 |||||||||||||||||||| Sbjct: 757 ccacggccacggtctcgacg 738
>emb|AL096801.18|HSJ181J13 Human DNA sequence from clone RP1-181J13 on chromosome 6p12.2-21.1 Contains the TNFRSF21 gene for tumor necrosis factor receptor superfamily superfamily member 21 (DR6) and a CpG Island, complete sequence Length = 118271 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 162 cttcctgctcggccacctgc 181 |||||||||||||||||||| Sbjct: 97766 cttcctgctcggccacctgc 97747
>emb|AL049749.2|HS293L6 Human DNA sequence from clone RP1-293L6 on chromosome 22 Contains the first exon of the CACNG2 gene for voltage-dependent calcium channel gamma subunit 2, ESTs, STSs, GSSs and a putative CpG island, complete sequence Length = 99497 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 27036 accaccaccatcagcaccac 27055
>emb|Z21970.1|CHAT54CPA Arabidopsis thaliana mRNA for 54CP protein Length = 1826 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 150 tcctcctctaggaatctctc 169
>emb|X16476.1|RSDRK1PC Rat drk1 gene mRNA for potassium channel protein Length = 3348 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gaccccaccccgctgctgcc 389 |||||||||||||||||||| Sbjct: 2044 gaccccaccccgctgctgcc 2063
>gb|AY050999.1| Arabidopsis thaliana putative signal recognition particle 54CP protein precursor (At5g03940) mRNA, complete cds Length = 1858 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 191 tcctcctctaggaatctctc 210
>emb|BX842580.1| Mycobacterium tuberculosis H37Rv complete genome; segment 9/13 Length = 346051 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 280 catcagcaccacggccacgg 299 |||||||||||||||||||| Sbjct: 288859 catcagcaccacggccacgg 288878
>emb|BX640420.1| Bordetella pertussis strain Tohama I, complete genome; segment 10/12 Length = 348134 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 287 accacggccacggtctcgacgagc 310 ||||||||||||||| |||||||| Sbjct: 149159 accacggccacggtcacgacgagc 149136
>emb|AL662812.12| Mouse DNA sequence from clone RP23-48A2 on chromosome 11 Contains the gene for a novel protein similar to smoothelin Smtn, three novel genes, the Mybbp1a gene for MYB binding protein (P160) 1a, a ribosomal protein 7a (Rpl7a) pseudogene, the 5' end of the Ube2g1 gene for ubiquitin-conjugating enzyme E2G 1 (UBC7 homolog, C. elegans) and four CpG islands, complete sequence Length = 258521 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 174171 accaccaccatcagcaccac 174152
>emb|AL606457.3|OSJN00002 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0018M05, complete sequence Length = 164943 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaat 96 |||||||||||||||||| ||||| Sbjct: 96659 agagagcgagagcgagagctcaat 96636
>emb|AL162873.1|ATF8F6 Arabidopsis thaliana DNA chromosome 5, BAC clone F8F6 (ESSA project) Length = 96936 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 52062 tcctcctctaggaatctctc 52043
>emb|AJ315734.1|HSA315734 Homo sapiens mRNA for metalloprotease disintegrin 16 (ADAMTS16 gene) Length = 3227 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 73 cctgctcggccacctgcgcc 54
>emb|AJ550991.1|STE550991 Streptomyces tenebrarius partial gene for 16S ribosomal RNA methylase, clone nebM Length = 267 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 gcctcgtcggcgccggcgtcgacc 229 ||||||||| |||||||||||||| Sbjct: 119 gcctcgtcgtcgccggcgtcgacc 96
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 266 tcgccgaccaccaccatcag 285 |||||||||||||||||||| Sbjct: 2651732 tcgccgaccaccaccatcag 2651713
>gb|AC153135.5| Mus musculus BAC clone RP24-181M6 from chromosome 13, complete sequence Length = 164002 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 18733 accaccaccatcagcaccac 18714
>gb|AC007623.33| Homo sapiens 12 BAC RP11-608E13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87201 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 55536 accaccaccatcagcaccac 55517
>gb|AC021593.15| Homo sapiens chromosome 17, clone RP11-153A23, complete sequence Length = 177738 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 143820 accaccaccatcagcaccac 143839
>gb|AF447969.1| Ardea herodias clone Ah475 microsatellite sequence Length = 204 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 98 accaccaccatcagcaccac 79
>dbj|AK127746.1| Homo sapiens cDNA FLJ45846 fis, clone OCBBF2007039, weakly similar to ADAM-TS 7 precursor (EC 3.4.24.-) Length = 3287 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 211 cctgctcggccacctgcgcc 192
>gb|AC010033.8| Drosophila melanogaster 3L BAC RP98-3I5 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 188653 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtagagagcgagagcgagag 90 |||||||||||||||||||| Sbjct: 87280 gtagagagcgagagcgagag 87299
>ref|NM_013186.1| Rattus norvegicus potassium voltage gated channel, Shab-related subfamily, member 1 (Kcnb1), mRNA Length = 3348 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 370 gaccccaccccgctgctgcc 389 |||||||||||||||||||| Sbjct: 2044 gaccccaccccgctgctgcc 2063
>tpg|BK002544.1| TPA: TPA_inf: Drosophila melanogaster HDC13506 (HDC13506) gene, complete cds Length = 446 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gaccaccaccatcagcacca 290 |||||||||||||||||||| Sbjct: 249 gaccaccaccatcagcacca 268
>gb|AC027343.7| Homo sapiens chromosome 5 clone CTD-2296D1, complete sequence Length = 68651 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 45442 accaccaccatcagcaccac 45461
>gb|CP000137.1| Rhizobium etli CFN 42 plasmid p42e, complete sequence Length = 505334 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 267 cgccgaccaccaccatcagc 286 |||||||||||||||||||| Sbjct: 78659 cgccgaccaccaccatcagc 78640
>dbj|AP007159.1| Aspergillus oryzae RIB40 genomic DNA, SC026 Length = 2324132 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 cttcgccgaccaccaccatc 283 |||||||||||||||||||| Sbjct: 1723517 cttcgccgaccaccaccatc 1723498
>gb|AC015795.20| Homo sapiens chromosome 17, clone RP11-613C6, complete sequence Length = 170862 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 62357 agagagcgagagcgagagat 62338
>dbj|AK133149.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4931403G09 product:bromodomain adjacent to zinc finger domain, 2A, full insert sequence Length = 2446 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 21 gctcggccacctgcgccgcc 40
>dbj|AK140355.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430220N06 product:bromodomain adjacent to zinc finger domain, 2A, full insert sequence Length = 3741 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 545 gctcggccacctgcgccgcc 564
>gb|AC096590.4| Homo sapiens BAC clone RP11-751A18 from 4, complete sequence Length = 182559 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tagagagcgagagcgagaga 91 |||||||||||||||||||| Sbjct: 87539 tagagagcgagagcgagaga 87558
>gb|AC008600.7| Homo sapiens chromosome 5 clone CTB-105J5, complete sequence Length = 147114 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 72 tagagagcgagagcgagaga 91 |||||||||||||||||||| Sbjct: 63114 tagagagcgagagcgagaga 63133
>gb|AY852250.1| Meleagris gallopavo syndecan-3 mRNA, complete cds Length = 1232 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 486 accaccaccatcagcaccac 505
>gb|AF146339.2|AF146339 Yarrowia lipolytica NADH:ubiquinone oxidoreductase 51 kDa subunit (NUO51) mRNA, partial cds Length = 1195 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccacggccacggtctcgacg 307 |||||||||||||||||||| Sbjct: 432 ccacggccacggtctcgacg 413
>gb|AF197536.2|AF197536 Yarrowia lipolytica nucleotide-binding respiratory complex I subunit (NUO51) gene, complete cds; nuclear gene for mitochondrial product Length = 2623 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccacggccacggtctcgacg 307 |||||||||||||||||||| Sbjct: 1659 ccacggccacggtctcgacg 1640
>dbj|AK157499.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830219L22 product:similar to MSTP115 [Homo sapiens], full insert sequence Length = 3185 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 599 accaccaccatcagcaccac 580
>gb|AF276075.1|AF276075 Ambystoma mexicanum POU domain transcription factor brn-1 mRNA, complete cds Length = 2319 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 747 accaccaccatcagcaccac 766
>gb|AC022424.6| Homo sapiens chromosome 5 clone CTD-2297D10, complete sequence Length = 104776 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 27167 cctgctcggccacctgcgcc 27186
>gb|AC109037.6| Rattus norvegicus 18 BAC CH230-178G23 (Children's Hospital Oakland Research Institute) complete sequence Length = 208650 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tagagagcgagagcgagaga 91 |||||||||||||||||||| Sbjct: 95563 tagagagcgagagcgagaga 95544
>gb|AC010269.6| Homo sapiens chromosome 5 clone CTC-485I21, complete sequence Length = 187084 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 46483 cctgctcggccacctgcgcc 46464
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 ccgcctcgtcggcgccggcgtcga 227 |||||||| ||||||||||||||| Sbjct: 2382484 ccgcctcgacggcgccggcgtcga 2382507
>dbj|AK087815.1| Mus musculus 2 days pregnant adult female ovary cDNA, RIKEN full-length enriched library, clone:E330024J20 product:unclassifiable, full insert sequence Length = 3554 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaat 96 |||||| ||||||||||||||||| Sbjct: 942 agagagagagagcgagagatcaat 919
>gb|AC012161.8|AC012161 Drosophila melanogaster, chromosome X, region 16B-16D, BAC clone BACR01I22, complete sequence Length = 173281 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 29189 agagagcgagagcgagagat 29208
>gb|AC011703.8|AC011703 Drosophila melanogaster, chromosome X, region 16A-16B, BAC clone BACR35P18, complete sequence Length = 163307 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 65523 agagagcgagagcgagagat 65542
>gb|AC011702.10|AC011702 Drosophila melanogaster, chromosome X, region 15F-16A, BAC clone BACR42I14, complete sequence Length = 167688 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 79170 agagagcgagagcgagagat 79189
>dbj|AK040966.1| Mus musculus adult male aorta and vein cDNA, RIKEN full-length enriched library, clone:A530052C14 product:unclassifiable, full insert sequence Length = 3735 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 3225 accaccaccatcagcaccac 3206
>gb|AC152979.2| Mus musculus 10 BAC RP23-325K4 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 183269 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 20612 accaccaccatcagcaccac 20631
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagatcaat 96 |||||||||||||||||| ||||| Sbjct: 34479174 agagagcgagagcgagagctcaat 34479151
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 caagtagagagcgagagcgagaga 91 ||||||||||| |||||||||||| Sbjct: 32886623 caagtagagagagagagcgagaga 32886646 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtagagagcgagagcgagag 90 |||||||||||||||||||| Sbjct: 30188490 gtagagagcgagagcgagag 30188509 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cctcgtcggcgccggcgtcgacca 230 ||||| |||||||||||||||||| Sbjct: 4826881 cctcggcggcgccggcgtcgacca 4826858
>emb|BX813333.7| Mouse DNA sequence from clone RP23-255A6 on chromosome 2, complete sequence Length = 163063 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68657 accaccaccatcagcaccac 68676 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68498 accaccaccatcagcaccac 68517 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68336 accaccaccatcagcaccac 68355 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68231 accaccaccatcagcaccac 68250 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68198 accaccaccatcagcaccac 68217 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 68177 accaccaccatcagcaccac 68196
>gb|AC007669.6|AC007669 Drosophila melanogaster, chromosome 3R, region 88A-88A, BAC clone BACR25B05, complete sequence Length = 181794 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gaccaccaccatcagcacca 290 |||||||||||||||||||| Sbjct: 160071 gaccaccaccatcagcacca 160090
>emb|BX005476.5| Zebrafish DNA sequence from clone CH211-124K10, complete sequence Length = 167885 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 65049 agagagcgagagcgagagat 65068
>gb|AC110614.4| Homo sapiens BAC clone RP11-453D22 from 2, complete sequence Length = 185018 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 cctcaacctgctcttcctgc 169 |||||||||||||||||||| Sbjct: 134371 cctcaacctgctcttcctgc 134390
>dbj|AP003229.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0022F10 Length = 150498 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtagagagcgagagcgagag 90 |||||||||||||||||||| Sbjct: 93312 gtagagagcgagagcgagag 93331
>gb|AC092601.3| Homo sapiens BAC clone RP11-125M15 from 2, complete sequence Length = 198364 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 ctcctcaacctgctcttcct 167 |||||||||||||||||||| Sbjct: 135052 ctcctcaacctgctcttcct 135071
>dbj|AP002743.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0710E05 Length = 179714 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cctcgtcggcgccggcgtcgacca 230 ||||| |||||||||||||||||| Sbjct: 71530 cctcggcggcgccggcgtcgacca 71507
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 211 gtcggcgccggcgtcgacca 230 |||||||||||||||||||| Sbjct: 7387855 gtcggcgccggcgtcgacca 7387836 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 206 gcctcgtcggcgccggcgtc 225 |||||||||||||||||||| Sbjct: 2937506 gcctcgtcggcgccggcgtc 2937487
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 205 cgcctcgtcggcgccggcgt 224 |||||||||||||||||||| Sbjct: 3604331 cgcctcgtcggcgccggcgt 3604350
>dbj|AP003344.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0413G02 Length = 155633 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 68 caagtagagagcgagagcgagaga 91 ||||||||||| |||||||||||| Sbjct: 108028 caagtagagagagagagcgagaga 108051
>emb|AL954339.10| Zebrafish DNA sequence from clone CH211-221J21 in linkage group 12, complete sequence Length = 203958 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 86 gagagatcaatacaaattat 105 |||||||||||||||||||| Sbjct: 22538 gagagatcaatacaaattat 22519
>dbj|BS000139.1| Pan troglodytes chromosome 22 clone:LA-PCR-3, map 22, complete sequences Length = 8610 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 6097 accaccaccatcagcaccac 6078
>gb|AE005087.1| Halobacterium sp. NRC-1 section 118 of 170 of the complete genome Length = 10924 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 199 ctgctccgcctcgtcggcgccggc 222 ||||||||||||||||| |||||| Sbjct: 595 ctgctccgcctcgtcggtgccggc 572
>dbj|AP005511.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0011N12 Length = 158586 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tgcgcggtgtgcctcggcga 416 |||||||||||||||||||| Sbjct: 19481 tgcgcggtgtgcctcggcga 19462
>dbj|AP005614.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0090H18 Length = 174842 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 397 tgcgcggtgtgcctcggcga 416 |||||||||||||||||||| Sbjct: 143302 tgcgcggtgtgcctcggcga 143283
>emb|AL512597.11| Mouse DNA sequence from clone RP23-132G2 on chromosome X, complete sequence Length = 174367 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 82746 accaccaccatcagcaccac 82727
>dbj|AP005541.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0436B05 Length = 149754 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 cggcgccggcgtcgaccaag 232 |||||||||||||||||||| Sbjct: 96163 cggcgccggcgtcgaccaag 96182
>dbj|AK119868.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-179-B12, full insert sequence Length = 1834 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 207 cctcgtcggcgccggcgtcgacca 230 ||||| |||||||||||||||||| Sbjct: 981 cctcggcggcgccggcgtcgacca 958
>ref|XM_566386.1| Anopheles gambiae str. PEST ENSANGP00000026727 (ENSANGG00000024736), partial mRNA Length = 882 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 267 cgccgaccaccaccatcagc 286 |||||||||||||||||||| Sbjct: 708 cgccgaccaccaccatcagc 727
>dbj|AK111161.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-177-B02, full insert sequence Length = 3318 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 145 ctgctcctcaacctgctcttcctgctcg 172 ||||||| ||||| |||||||||||||| Sbjct: 300 ctgctccgcaacccgctcttcctgctcg 327
>gb|AF141314.1|AF141314 Mus musculus gp49A gene, complete cds Length = 7810 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 5872 accaccaccatcagcaccac 5891
>dbj|AK069645.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023027O16, full insert sequence Length = 2370 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagatcaat 96 |||||||||||||||||| ||||| Sbjct: 36 agagagcgagagcgagagctcaat 59
>dbj|AK067006.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013093O09, full insert sequence Length = 4009 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 71 gtagagagcgagagcgagag 90 |||||||||||||||||||| Sbjct: 109 gtagagagcgagagcgagag 90
>gb|AC154522.3| Mus musculus BAC clone RP23-480O9 from 13, complete sequence Length = 176876 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 74 gagagcgagagcgagagatc 93 |||||||||||||||||||| Sbjct: 100188 gagagcgagagcgagagatc 100169
>emb|CR377223.6| Zebrafish DNA sequence from clone DKEY-12O15 in linkage group 18, complete sequence Length = 211465 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 388 ccggagggctgcgcggtgtg 407 |||||||||||||||||||| Sbjct: 12043 ccggagggctgcgcggtgtg 12062
>emb|AJ249782.1|YLI249782 Yarrowia lipolytica nubm gene for NUBM protein Length = 2829 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccacggccacggtctcgacg 307 |||||||||||||||||||| Sbjct: 1277 ccacggccacggtctcgacg 1258
>gb|AE003702.3| Drosophila melanogaster chromosome 3R, section 40 of 118 of the complete sequence Length = 227413 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 271 gaccaccaccatcagcacca 290 |||||||||||||||||||| Sbjct: 180518 gaccaccaccatcagcacca 180537
>gb|AE003544.4| Drosophila melanogaster chromosome 3L, section 41 of 83 of the complete sequence Length = 280378 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 71 gtagagagcgagagcgagag 90 |||||||||||||||||||| Sbjct: 105728 gtagagagcgagagcgagag 105747
>gb|AE003506.3| Drosophila melanogaster chromosome X, section 58 of 74 of the complete sequence Length = 302073 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 100366 agagagcgagagcgagagat 100385
>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105 Length = 340000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 11310 agagagcgagagcgagagat 11329
>dbj|AP000245.3| Homo sapiens genomic DNA, chromosome 21 clone:RP11-14B21, complete sequence Length = 159903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 118886 agagagcgagagcgagagat 118905
>emb|AL928859.13| Mouse DNA sequence from clone RP23-479N10 on chromosome 2, complete sequence Length = 135750 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 11878 accaccaccatcagcaccac 11897
>gb|AF092168.1|AF092168 Arabidopsis thaliana signal recognition particle 54 kDa subunit precursor (SRP54) gene, nuclear gene encoding chloroplast protein, complete cds Length = 3143 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 4 tcctcctctaggaatctctc 23 |||||||||||||||||||| Sbjct: 148 tcctcctctaggaatctctc 167
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 268 gccgaccaccaccatcagcaccac 291 |||||||||| ||||||||||||| Sbjct: 3954033 gccgaccaccgccatcagcaccac 3954056
>emb|CT010483.12| Mouse DNA sequence from clone RP23-281L8 on chromosome 17, complete sequence Length = 189895 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 71790 accaccaccatcagcaccac 71771
>gb|AC131120.4| Mus musculus BAC clone RP24-547N4 from 10, complete sequence Length = 228657 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 212824 gctcggccacctgcgccgcc 212843
>gb|AF038408.1|AF038408 Streptoalloteichus hindustanus 16S ribosomal RNA methylase (nbrB) gene, partial cds Length = 1217 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 206 gcctcgtcggcgccggcgtcgacc 229 ||||||||| |||||||||||||| Sbjct: 399 gcctcgtcgtcgccggcgtcgacc 376
>gb|AC137515.3| Mus musculus BAC clone RP23-258C20 from 1, complete sequence Length = 215582 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 1239 agagagcgagagcgagagat 1220
>gb|AC140306.3| Mus musculus BAC clone RP23-386L13 from 8, complete sequence Length = 220059 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 72 tagagagcgagagcgagaga 91 |||||||||||||||||||| Sbjct: 184318 tagagagcgagagcgagaga 184299
>emb|BX284661.1| Human DNA sequence from clone RP1-293L6 on chromosome 22, complete sequence Length = 27251 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 212 accaccaccatcagcaccac 193
>emb|AL929075.5| Zebrafish DNA sequence from clone CH211-132B9 in linkage group 5, complete sequence Length = 195380 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 147546 agagagcgagagcgagagat 147565
>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica Length = 3066374 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 288 ccacggccacggtctcgacg 307 |||||||||||||||||||| Sbjct: 2690168 ccacggccacggtctcgacg 2690149
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 168 gctcggccacctgcgccgcc 187 |||||||||||||||||||| Sbjct: 468219 gctcggccacctgcgccgcc 468200
>gb|AD000002.1|MSGY154 Mycobacterium tuberculosis sequence from clone y154 Length = 40221 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 280 catcagcaccacggccacgg 299 |||||||||||||||||||| Sbjct: 3538 catcagcaccacggccacgg 3519
>emb|AL928911.7| Mouse DNA sequence from clone RP23-271N3 on chromosome 2, complete sequence Length = 93455 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 41586 accaccaccatcagcaccac 41567
>gb|M84910.1|CHKSNDCPRO Chicken syndecan-3 proteoglycan mRNA, complete cds Length = 1372 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 522 accaccaccatcagcaccac 541
>emb|AL603829.5| Mouse DNA sequence from clone RP23-416G21 on chromosome 11, complete sequence Length = 226220 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 156884 accaccaccatcagcaccac 156903 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 156842 accaccaccatcagcaccac 156861 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 272 accaccaccatcagcaccac 291 |||||||||||||||||||| Sbjct: 156821 accaccaccatcagcaccac 156840
>emb|AL844547.9| Mouse DNA sequence from clone RP23-216B20 on chromosome 2, complete sequence Length = 210589 Score = 40.1 bits (20), Expect = 5.7 Identities = 26/28 (92%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagatcaatacaa 100 |||||| ||||| ||||||||||||||| Sbjct: 186246 agagagagagagagagagatcaatacaa 186273
>gb|DQ266047.1| Homo sapiens ADAMTS16s alternative splice form mRNA, complete cds Length = 2682 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 cctgctcggccacctgcgcc 184 |||||||||||||||||||| Sbjct: 211 cctgctcggccacctgcgcc 192
>dbj|AP000206.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 4/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 73 agagagcgagagcgagagat 92 |||||||||||||||||||| Sbjct: 85298 agagagcgagagcgagagat 85317 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,959,567 Number of Sequences: 3902068 Number of extensions: 3959567 Number of successful extensions: 109012 Number of sequences better than 10.0: 221 Number of HSP's better than 10.0 without gapping: 230 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 105734 Number of HSP's gapped (non-prelim): 3278 length of query: 425 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 403 effective length of database: 17,147,199,772 effective search space: 6910321508116 effective search space used: 6910321508116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)