ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet90g10 |
|---|---|
| Clone Library Name | barley_pub |
>emb|Z37114.1|HVLTPPA H.vulgare (clone pKG2316) mRNA for lipid transfer protein precursor Length = 627 Score = 125 bits (63), Expect = 1e-26 Identities = 63/63 (100%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 62 Query: 61 gta 63 ||| Sbjct: 63 gta 65
>emb|X68655.1|HVCW18 H.vulgare Cw-18 mRNA Length = 732 Score = 125 bits (63), Expect = 1e-26 Identities = 63/63 (100%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 74 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 133 Query: 61 gta 63 ||| Sbjct: 134 gta 136
>emb|X56547.1|HSBLT4 H. vulgare BLT4 mRNA Length = 724 Score = 109 bits (55), Expect = 8e-22 Identities = 61/63 (96%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct: 75 atggctcgcactgcagcaaccaagctcgcgctggtgcccctggtggcggcaatgctcctc 134 Query: 61 gta 63 ||| Sbjct: 135 gta 137
>gb|AY796184.1| Triticum aestivum lipid transfer protein (LTP1) mRNA, complete cds Length = 348 Score = 101 bits (51), Expect = 2e-19 Identities = 57/59 (96%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcct 59 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1 atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgctcct 59
>gb|DQ465677.1| Triticum aestivum clone Lt10B6 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 101 bits (51), Expect = 2e-19 Identities = 57/59 (96%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcct 59 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 1 atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgctcct 59
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 101 bits (51), Expect = 2e-19 Identities = 57/59 (96%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcct 59 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 2857 atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgctcct 2915
>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA, complete cds Length = 737 Score = 101 bits (51), Expect = 2e-19 Identities = 57/59 (96%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcct 59 |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| Sbjct: 61 atggctcgcactgcagcaacaaagctcgtgctggtcgccctggtggcggcaatgctcct 119
>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 730 Score = 89.7 bits (45), Expect = 7e-16 Identities = 57/61 (93%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||||||||||| || ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 80 atggctcgcactgcagctactaagctcgtgctggtcgccctggtggcggcaatgatcctc 139 Query: 61 g 61 | Sbjct: 140 g 140
>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid transfer protein precursor Length = 496 Score = 89.7 bits (45), Expect = 7e-16 Identities = 57/61 (93%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||||||||||| || ||||||| ||||||||||||||||||||||||| ||||| Sbjct: 21 atggctcgcactgcagctactaagctcgtgctggtcgccctggtggcggcaatgatcctc 80 Query: 61 g 61 | Sbjct: 81 g 81
>gb|AY754742.1| Triticum aestivum lipid transfer protein (LTP2) mRNA, complete cds Length = 348 Score = 81.8 bits (41), Expect = 2e-13 Identities = 56/61 (91%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||||||||||| || || |||| ||||||||||||||||||||||||| ||||| Sbjct: 1 atggctcgcactgcagctactaaactcgtgctggtcgccctggtggcggcaatgatcctc 60 Query: 61 g 61 | Sbjct: 61 g 61
>gb|AY789644.1| Triticum aestivum lipid transfer protein 4 (LTP4) mRNA, complete cds Length = 345 Score = 69.9 bits (35), Expect = 7e-10 Identities = 47/51 (92%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggca 51 |||||||||||| |||| || ||||||| |||||||||||||||||||||| Sbjct: 1 atggctcgcactacagctactaagctcgtgctggtcgccctggtggcggca 51
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 61.9 bits (31), Expect = 2e-07 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||| ||||||| || |||||| |||||||||| ||||||| || ||||||||| Sbjct: 1030 atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgctcctc 1089 Query: 61 gta 63 ||| Sbjct: 1090 gta 1092
>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA Length = 660 Score = 61.9 bits (31), Expect = 2e-07 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||| ||||||| || |||||| |||||||||| ||||||| || ||||||||| Sbjct: 46 atggctcgcgctgcagctactcagctcgtgctggtcgccatggtggccgctatgctcctc 105 Query: 61 gta 63 ||| Sbjct: 106 gta 108
>emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 Score = 61.9 bits (31), Expect = 2e-07 Identities = 55/63 (87%) Strand = Plus / Plus Query: 1 atggctcgcactgcagcaaccaagctcgcgctggtcgccctggtggcggcaatgctcctc 60 ||||||||| ||||||| | |||||| |||||||||||||||||| || ||||||||| Sbjct: 60 atggctcgcgctgcagctagtcagctcgtgctggtcgccctggtggccgccatgctcctc 119 Query: 61 gta 63 ||| Sbjct: 120 gta 122
>emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid transfer protein precursor Length = 691 Score = 50.1 bits (25), Expect = 6e-04 Identities = 37/41 (90%) Strand = Plus / Plus Query: 23 agctcgcgctggtcgccctggtggcggcaatgctcctcgta 63 |||||| |||||||||| ||||||| || |||||||||||| Sbjct: 37 agctcgtgctggtcgccatggtggccgctatgctcctcgta 77
>gb|U18127.1|HVU18127 Hordeum vulgare phospholipid transfer protein precursor gene, complete cds Length = 573 Score = 50.1 bits (25), Expect = 6e-04 Identities = 37/41 (90%) Strand = Plus / Plus Query: 23 agctcgcgctggtcgccctggtggcggcaatgctcctcgta 63 |||||| |||||||||| ||||||| || |||||||||||| Sbjct: 108 agctcgtgctggtcgccatggtggccgctatgctcctcgta 148
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 46.1 bits (23), Expect = 0.010 Identities = 23/23 (100%) Strand = Plus / Minus Query: 26 tcgcgctggtcgccctggtggcg 48 ||||||||||||||||||||||| Sbjct: 1674913 tcgcgctggtcgccctggtggcg 1674891 Score = 36.2 bits (18), Expect = 9.5 Identities = 25/26 (96%), Gaps = 1/26 (3%) Strand = Plus / Plus Query: 22 aagctcgcgctggtcgccctggtggc 47 ||||||||||||| |||||||||||| Sbjct: 2242725 aagctcgcgctgg-cgccctggtggc 2242749
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 0.61 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 gctcgcgctggtcgccctggtggc 47 ||||||||||||||||| |||||| Sbjct: 887161 gctcgcgctggtcgccccggtggc 887138
>gb|CP000100.1| Synechococcus elongatus PCC 7942, complete genome Length = 2695903 Score = 40.1 bits (20), Expect = 0.61 Identities = 20/20 (100%) Strand = Plus / Plus Query: 3 ggctcgcactgcagcaacca 22 |||||||||||||||||||| Sbjct: 2201923 ggctcgcactgcagcaacca 2201942
>gb|AY741093.1| Integration vector pJK202, complete sequence Length = 53204 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggc 50 ||||||||||||||||||| Sbjct: 16940 tggtcgccctggtggcggc 16958
>gb|AC167718.4| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940130D9, complete sequence Length = 117683 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 ctggtcgccctggtggcgg 49 ||||||||||||||||||| Sbjct: 32406 ctggtcgccctggtggcgg 32388
>emb|AJ744860.1| uncultured bacterium pTB11 plasmid complete genome Length = 68869 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggc 50 ||||||||||||||||||| Sbjct: 26193 tggtcgccctggtggcggc 26211
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 24 gctcgcgctggtcgccctg 42 ||||||||||||||||||| Sbjct: 144557 gctcgcgctggtcgccctg 144539
>gb|AC167662.6| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940141D9, complete sequence Length = 117679 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 ctggtcgccctggtggcgg 49 ||||||||||||||||||| Sbjct: 85275 ctggtcgccctggtggcgg 85293
>gb|AC112503.7| Homo sapiens 3 BAC RP11-797D24 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 86290 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 9 cactgcagcaaccaagctc 27 ||||||||||||||||||| Sbjct: 68017 cactgcagcaaccaagctc 67999
>emb|AL939114.1|SCO939114 Streptomyces coelicolor A3(2) complete genome; segment 11/29 Length = 313800 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 28 gcgctggtcgccctggtggcggc 50 ||||||||||| ||||||||||| Sbjct: 78253 gcgctggtcgcgctggtggcggc 78275 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 31 ctggtcgccctggtggcg 48 |||||||||||||||||| Sbjct: 187974 ctggtcgccctggtggcg 187957
>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29 Length = 321250 Score = 38.2 bits (19), Expect = 2.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 26 tcgcgctggtcgccctggtggcg 48 ||||||||| ||||||||||||| Sbjct: 121294 tcgcgctgggcgccctggtggcg 121272
>gb|AY119506.1| Drosophila melanogaster GH12423 full insert cDNA Length = 3528 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 tggcggcaatgctcctcgt 62 ||||||||||||||||||| Sbjct: 2467 tggcggcaatgctcctcgt 2449
>gb|AC009384.7| Drosophila melanogaster 3L BAC RP98-10L1 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 168652 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 tggcggcaatgctcctcgt 62 ||||||||||||||||||| Sbjct: 152858 tggcggcaatgctcctcgt 152876
>ref|NM_140917.1| Drosophila melanogaster CG14186-RA (CG14186), mRNA Length = 3505 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 44 tggcggcaatgctcctcgt 62 ||||||||||||||||||| Sbjct: 2467 tggcggcaatgctcctcgt 2449
>gb|AC009383.8| Drosophila melanogaster 3L BAC RP98-31C3 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 179283 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 tggcggcaatgctcctcgt 62 ||||||||||||||||||| Sbjct: 28227 tggcggcaatgctcctcgt 28245
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 38.2 bits (19), Expect = 2.4 Identities = 25/27 (92%) Strand = Plus / Plus Query: 24 gctcgcgctggtcgccctggtggcggc 50 ||||||| || |||||||||||||||| Sbjct: 705289 gctcgcggtgttcgccctggtggcggc 705315 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 31 ctggtcgccctggtggcg 48 |||||||||||||||||| Sbjct: 4638134 ctggtcgccctggtggcg 4638117
>gb|AE003514.4| Drosophila melanogaster chromosome 3L, section 71 of 83 of the complete sequence Length = 299903 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 44 tggcggcaatgctcctcgt 62 ||||||||||||||||||| Sbjct: 71244 tggcggcaatgctcctcgt 71262
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 31 ctggtcgccctggtggcgg 49 ||||||||||||||||||| Sbjct: 3560940 ctggtcgccctggtggcgg 3560958
>emb|AL671090.9| Mouse DNA sequence from clone RP23-154A10 on chromosome 4, complete sequence Length = 197665 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 atggctcgcactgcagcaa 19 ||||||||||||||||||| Sbjct: 165938 atggctcgcactgcagcaa 165920
>gb|M93696.1|RP4TRBAO Plasmid RP4 (trbA-trbO) genes, complete cds Length = 13205 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggc 50 ||||||||||||||||||| Sbjct: 11974 tggtcgccctggtggcggc 11992
>gb|L27758.1|BIACOMGEN Birmingham IncP-alpha plasmid (R18, R68, RK2, RP1, RP4) complete genome Length = 60099 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggc 50 ||||||||||||||||||| Sbjct: 29931 tggtcgccctggtggcggc 29949
>dbj|AB032799.1| Chromobacterium violaceum violacein biosynthetic gene cluster (vio A, vio B, vio C, vio D), complete cds Length = 9077 Score = 38.2 bits (19), Expect = 2.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 31 ctggtcgccctggtggcgg 49 ||||||||||||||||||| Sbjct: 5900 ctggtcgccctggtggcgg 5882
>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome Length = 3345170 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 24 gctcgcgctggtcgccct 41 |||||||||||||||||| Sbjct: 2085079 gctcgcgctggtcgccct 2085096
>gb|AE009063.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 89 of 256 of the complete sequence Length = 10273 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 cgccctggtggcggcaat 53 |||||||||||||||||| Sbjct: 4037 cgccctggtggcggcaat 4054
>gb|CP000359.1| Deinococcus geothermalis DSM 11300, complete genome Length = 2467205 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 22 aagctcgcgctggtcgcc 39 |||||||||||||||||| Sbjct: 1376542 aagctcgcgctggtcgcc 1376525
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 36.2 bits (18), Expect = 9.5 Identities = 21/22 (95%) Strand = Plus / Plus Query: 28 gcgctggtcgccctggtggcgg 49 |||||||||||| ||||||||| Sbjct: 5721363 gcgctggtcgccgtggtggcgg 5721384
>gb|AE004422.1| Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, section 79 of 93 of the complete chromosome Length = 10217 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 1 atggctcgcactgcagca 18 |||||||||||||||||| Sbjct: 2195 atggctcgcactgcagca 2178
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 28 gcgctggtcgccctggtg 45 |||||||||||||||||| Sbjct: 228563 gcgctggtcgccctggtg 228580
>gb|AE006022.1| Caulobacter crescentus CB15 section 348 of 359 of the complete genome Length = 10637 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 26 tcgcgctggtcgccctgg 43 |||||||||||||||||| Sbjct: 9371 tcgcgctggtcgccctgg 9388
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 36 cgccctggtggcggcaat 53 |||||||||||||||||| Sbjct: 978243 cgccctggtggcggcaat 978260
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 cgcgctggtcgccctggt 44 |||||||||||||||||| Sbjct: 4878648 cgcgctggtcgccctggt 4878665 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 27 cgcgctggtcgccctggt 44 |||||||||||||||||| Sbjct: 2066803 cgcgctggtcgccctggt 2066786
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 31 ctggtcgccctggtggcg 48 |||||||||||||||||| Sbjct: 763188 ctggtcgccctggtggcg 763205
>gb|AE006470.1| Chlorobium tepidum TLS, complete genome Length = 2154946 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 36 cgccctggtggcggcaat 53 |||||||||||||||||| Sbjct: 1362198 cgccctggtggcggcaat 1362181
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 736428 tggtcgccctggtggcagctctgctcctcg 736457
>emb|BX324189.12| Zebrafish DNA sequence from clone CH211-273J12 in linkage group 16, complete sequence Length = 35946 Score = 36.2 bits (18), Expect = 9.5 Identities = 24/26 (92%) Strand = Plus / Minus Query: 20 ccaagctcgcgctggtcgccctggtg 45 ||||| |||| ||||||||||||||| Sbjct: 13837 ccaaggtcgctctggtcgccctggtg 13812
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 36.2 bits (18), Expect = 9.5 Identities = 21/22 (95%) Strand = Plus / Minus Query: 29 cgctggtcgccctggtggcggc 50 |||||||||||||||| ||||| Sbjct: 6429074 cgctggtcgccctggtcgcggc 6429053 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Minus Query: 27 cgcgctggtcgccctggt 44 |||||||||||||||||| Sbjct: 494356 cgcgctggtcgccctggt 494339
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 30 gctggtcgccctggtggc 47 |||||||||||||||||| Sbjct: 4508673 gctggtcgccctggtggc 4508690
>emb|Y08691.1|OSLPI O.sativa mRNA for lipid transfer protein Length = 799 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 123 tggtcgccctggtggcagctctgctcctcg 152
>emb|X83435.1|OSLTPA15 O.sativa mRNA for lipid transfer protein, a15 Length = 511 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 98 tggtcgccctggtggcagctctgctcctcg 127
>dbj|AK059808.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-205-A04, full insert sequence Length = 995 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 355 tggtcgccctggtggcagctctgctcctcg 384
>gb|AF017360.1|AF017360 Oryza sativa lipid transfer protein LPT III mRNA, complete cds Length = 805 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 98 tggtcgccctggtggcagctctgctcctcg 127
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 736428 tggtcgccctggtggcagctctgctcctcg 736457
>emb|BX000511.2|CNS08CE1 Oryza sativa chromosome 12, . BAC OJ1136_E08 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 118211 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Minus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 42706 tggtcgccctggtggcagctctgctcctcg 42677
>gb|U77295.1|OSU77295 Oryza sativa lipid transfer protein (LTP) mRNA, complete cds Length = 799 Score = 36.2 bits (18), Expect = 9.5 Identities = 27/30 (90%) Strand = Plus / Plus Query: 32 tggtcgccctggtggcggcaatgctcctcg 61 |||||||||||||||| || ||||||||| Sbjct: 123 tggtcgccctggtggcagctctgctcctcg 152
>dbj|AB070949.1| Streptomyces avermitilis polyene macrolide biosynthetic gene cluster Length = 78210 Score = 36.2 bits (18), Expect = 9.5 Identities = 18/18 (100%) Strand = Plus / Plus Query: 27 cgcgctggtcgccctggt 44 |||||||||||||||||| Sbjct: 70502 cgcgctggtcgccctggt 70519 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 308,432 Number of Sequences: 3902068 Number of extensions: 308432 Number of successful extensions: 20476 Number of sequences better than 10.0: 61 Number of HSP's better than 10.0 without gapping: 62 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 19555 Number of HSP's gapped (non-prelim): 921 length of query: 64 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 43 effective length of database: 17,151,101,840 effective search space: 737497379120 effective search space used: 737497379120 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 18 (36.2 bits)
