>UHRF1_RAT (Q7TPK1) Ubiquitin-like PHD and RING finger domain-containing|
           protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 1) (Liver
           regeneration-related protein LRRG126)
          Length = 774

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
 Frame = -1

Query: 101 RVVSSKTTDHQPEVAGVHSLSNDDGRS------DEEDVD 3
           RV  S++  H+P VAG+H  SND   S       E+DVD
Sbjct: 430 RVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVD 468

>UHRF1_MOUSE (Q8VDF2) Ubiquitin-like PHD and RING finger domain-containing|
           protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 1) (Nuclear zinc finger
           protein Np95) (Nuclear protein 95)
          Length = 782

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
 Frame = -1

Query: 101 RVVSSKTTDHQPEVAGVHSLSNDDGRS------DEEDVD 3
           RV  S++  H+P VAG+H  SND   S       E+DVD
Sbjct: 438 RVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVD 476

>UHRF1_HUMAN (Q96T88) Ubiquitin-like PHD and RING finger domain-containing|
           protein 1 (EC 6.3.2.-) (Ubiquitin-like-containing PHD
           and RING finger domains protein 1) (Inverted CCAAT
           box-binding protein of 90 kDa) (Transcription factor
           ICBP90) (Nuclear zinc
          Length = 793

 Score = 29.6 bits (65), Expect = 2.4
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 6/39 (15%)
 Frame = -1

Query: 101 RVVSSKTTDHQPEVAGVHSLSNDDGRS------DEEDVD 3
           RV  S++  H+P VAG+H  SND   S       E+DVD
Sbjct: 433 RVQVSESGVHRPHVAGIHGRSNDGAYSLVLAGGYEDDVD 471

>CO4A2_MOUSE (P08122) Collagen alpha-2(IV) chain precursor|
          Length = 1707

 Score = 28.5 bits (62), Expect = 5.3
 Identities = 11/34 (32%), Positives = 19/34 (55%)
 Frame = -1

Query: 104 ARVVSSKTTDHQPEVAGVHSLSNDDGRSDEEDVD 3
           +R +++K    QP + GVH +  DDG    + +D
Sbjct: 545 SRTITTKGERGQPGIPGVHGMKGDDGVPGRDGLD 578


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,521,284
Number of Sequences: 219361
Number of extensions: 175153
Number of successful extensions: 726
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 80,573,946
effective HSP length: 26
effective length of database: 74,870,560
effective search space used: 1796893440
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)