ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet81f11 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009307.1| Triticum aestivum clone wlm1.pk0018.b5:fis, full insert mRNA sequence Length = 1381 Score = 234 bits (118), Expect = 8e-59 Identities = 139/145 (95%), Gaps = 2/145 (1%) Strand = Plus / Plus Query: 42 agcacagctccacacacaccatggcagccatggccaccaccgcctccagcctcctcaaga 101 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 6 agcacagctccacacac--catggcagccatggccaccaccgcctccagcctcctcaagc 63 Query: 102 gctccttctccggcgtccgcctcccggcggcggcccgcaccccgtcctgcgttgccaccc 161 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct: 64 cctccttctccggcgtccgcctcccggcggcggcccgcaccccgtcctgcgtcgccaccc 123 Query: 162 cgcgcgccggcgccatctgcaactc 186 |||| |||||||||||||||||||| Sbjct: 124 cgcgtgccggcgccatctgcaactc 148
>gb|DQ176424.1| Oryza sativa (indica cultivar-group) pathogen-induced defense-responsive protein 8 (DR8) gene, complete cds Length = 1980 Score = 103 bits (52), Expect = 2e-19 Identities = 73/80 (91%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||| || Sbjct: 607 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgccggcgtgcg 666 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 667 cctccccgccgccgcccgca 686
>ref|XM_478512.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1412 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 57 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 116 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 117 cctccccgccgccgcccgca 136
>ref|XM_478513.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1490 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 57 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 116 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 117 cctccccgccgccgcccgca 136
>dbj|AB110170.1| Oryza sativa (japonica cultivar-group) mRNA for thiamine biosynthetic enzyme, complete cds, clone: 12YPR001 Length = 1373 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 35 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 94 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 95 cctccccgccgccgcccgca 114
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 20671057 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 20671116 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 20671117 cctccccgccgccgcccgca 20671136 Score = 42.1 bits (21), Expect = 0.60 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ctcctcaagagctccttctccggcg 116 ||||||||||||||| ||||||||| Sbjct: 23841391 ctcctcaagagctccctctccggcg 23841367 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gccaccccgcgcgccggcgcc 175 ||||||||||||||||||||| Sbjct: 2150367 gccaccccgcgcgccggcgcc 2150347
>dbj|AP004674.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0681F05 Length = 144741 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 23807 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 23866 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 23867 cctccccgccgccgcccgca 23886
>dbj|AK099918.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116J24, full insert sequence Length = 1412 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 57 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 116 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 117 cctccccgccgccgcccgca 136
>dbj|AK064916.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000M17, full insert sequence Length = 1492 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 61 catggcagccatggccaccaccgcctccagcctcctcaagagctccttctccggcgtccg 120 |||||||||||||||||||||||| |||||||||||||||| ||||||| | |||| || Sbjct: 57 catggcagccatggccaccaccgcgtccagcctcctcaagacctccttcgctggcgcgcg 116 Query: 121 cctcccggcggcggcccgca 140 |||||| || || ||||||| Sbjct: 117 cctccccgccgccgcccgca 136
>gb|BT009012.1| Triticum aestivum clone wdk3c.pk006.c16:fis, full insert mRNA sequence Length = 1234 Score = 44.1 bits (22), Expect = 0.15 Identities = 43/50 (86%) Strand = Plus / Plus Query: 137 cgcaccccgtcctgcgttgccaccccgcgcgccggcgccatctgcaactc 186 |||||||| ||||| | ||||||| |||| |||| |||||||||||||| Sbjct: 14 cgcaccccctcctgtgccgccacccggcgcaccggggccatctgcaactc 63
>ref|NM_201835.2| Arabidopsis thaliana transferase AT2G30200 transcript variant AT2G30200.2 mRNA, complete cds Length = 1652 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 362 gccatggccaccaccgcctcc 382
>ref|NM_128573.1| Arabidopsis thaliana [acyl-carrier protein] S-malonyltransferase/ transferase AT2G30200 transcript variant AT2G30200.1 mRNA, complete cds Length = 1435 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 127 gccatggccaccaccgcctcc 147
>ref|XM_478925.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1126 Score = 42.1 bits (21), Expect = 0.60 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 ctcctcaagagctccttctccggcg 116 ||||||||||||||| ||||||||| Sbjct: 518 ctcctcaagagctccctctccggcg 542
>gb|AY735592.1| Arabidopsis thaliana hypothetical protein AT2G30200 mRNA, complete cds Length = 1344 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 94 gccatggccaccaccgcctcc 114
>gb|AC158939.9| Mus musculus chromosome 5, clone RP23-204A8, complete sequence Length = 218847 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 47 agctccacacacaccatggca 67 ||||||||||||||||||||| Sbjct: 133146 agctccacacacaccatggca 133166
>ref|XM_846690.1| PREDICTED: Canis familiaris fibroblast growth factor-8 (FGF-8), mRNA Length = 864 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcacccc 144 ||||||||||||||||||||| Sbjct: 260 cccggcggcggcccgcacccc 240
>gb|AC098690.3| Homo sapiens chromosome 1 clone RP11-507I14, complete sequence Length = 128000 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccagcctcctcaagagctcct 107 ||||||||||||||||||||| Sbjct: 24756 ccagcctcctcaagagctcct 24736
>gb|AC093563.3| Homo sapiens chromosome 1 clone RP4-648I13, complete sequence Length = 163579 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 ccagcctcctcaagagctcct 107 ||||||||||||||||||||| Sbjct: 77626 ccagcctcctcaagagctcct 77606
>gb|AY122949.1| Arabidopsis thaliana putative malonyl-CoA (At2g30200) mRNA, complete cds Length = 1213 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 76 gccatggccaccaccgcctcc 96
>gb|AY091077.1| Arabidopsis thaliana putative malonyl-CoA:Acyl carrier protein transacylase (At2g30200) mRNA, complete cds Length = 1428 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 126 gccatggccaccaccgcctcc 146
>gb|AC004165.3| Arabidopsis thaliana chromosome 2 clone T27E13 map m283, complete sequence Length = 83796 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 20233 gccatggccaccaccgcctcc 20253
>gb|AC002338.3| Arabidopsis thaliana chromosome 2 clone T9D9 map m283, complete sequence Length = 79272 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 1186 gccatggccaccaccgcctcc 1166
>gb|AC018442.8| Homo sapiens chromosome 8, clone RP11-402L5, complete sequence Length = 192545 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ccaccgcctccagcctcctca 98 ||||||||||||||||||||| Sbjct: 121651 ccaccgcctccagcctcctca 121631
>gb|AC019187.3|AC019187 Homo sapiens BAC clone RP11-304J20 from 1, complete sequence Length = 174673 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 ccagcctcctcaagagctcct 107 ||||||||||||||||||||| Sbjct: 66984 ccagcctcctcaagagctcct 67004
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 30577379 gccatggccaccaccgcctcc 30577359 Score = 38.2 bits (19), Expect = 9.4 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Minus Query: 49 ctccacacacaccatggcagccatggc 75 |||||||||||| |||||||||||||| Sbjct: 1368005 ctccacacacac-atggcagccatggc 1367980
>emb|BX820991.1|CNS0A9LT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH89ZG09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1325 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 35 gccatggccaccaccgcctcc 55
>emb|BX820825.1|CNS0A9IH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH72ZF06 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1328 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 90 gccatggccaccaccgcctcc 110
>emb|BX820581.1|CNS0A9LF Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH4ZD04 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1356 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 95 gccatggccaccaccgcctcc 115
>emb|BX820473.1|CNS0A9OH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH38ZE12 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1331 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 72 gccatggccaccaccgcctcc 92
>emb|BX820262.1|CNS0A9J5 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH14ZH05 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1310 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 67 gccatggccaccaccgcctcc 87
>emb|BX821339.1|CNS0A99X Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL34ZG08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1357 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 113 gccatggccaccaccgcctcc 133
>emb|BX819770.1|CNS0A9DV Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD03 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1350 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 100 gccatggccaccaccgcctcc 120
>emb|BX820752.1|CNS0A81Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH67ZA11 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1324 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 64 gccatggccaccaccgcctcc 84
>gb|AY086952.1| Arabidopsis thaliana clone 299 mRNA, complete sequence Length = 1436 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 127 gccatggccaccaccgcctcc 147
>dbj|AP005750.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0069C14 Length = 150579 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 75942 gccatggccaccaccgcctcc 75922
>dbj|AP003985.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1047_C01 Length = 97427 Score = 42.1 bits (21), Expect = 0.60 Identities = 24/25 (96%) Strand = Plus / Minus Query: 92 ctcctcaagagctccttctccggcg 116 ||||||||||||||| ||||||||| Sbjct: 29891 ctcctcaagagctccctctccggcg 29867
>dbj|AP004010.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1351_C05 Length = 112465 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gccaccccgcgcgccggcgcc 175 ||||||||||||||||||||| Sbjct: 18269 gccaccccgcgcgccggcgcc 18249
>gb|AY924753.1| Arabidopsis thaliana hypothetical protein (At2g30200) mRNA, complete cds Length = 1182 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Plus Query: 68 gccatggccaccaccgcctcc 88 ||||||||||||||||||||| Sbjct: 76 gccatggccaccaccgcctcc 96
>dbj|AK108192.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-140-C03, full insert sequence Length = 1127 Score = 42.1 bits (21), Expect = 0.60 Identities = 24/25 (96%) Strand = Plus / Plus Query: 92 ctcctcaagagctccttctccggcg 116 ||||||||||||||| ||||||||| Sbjct: 518 ctcctcaagagctccctctccggcg 542
>dbj|AP003829.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1417_E01 Length = 118058 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 155 gccaccccgcgcgccggcgcc 175 ||||||||||||||||||||| Sbjct: 106160 gccaccccgcgcgccggcgcc 106140
>gb|AY103632.1| Zea mays PCO074324 mRNA sequence Length = 1480 Score = 42.1 bits (21), Expect = 0.60 Identities = 41/47 (87%), Gaps = 3/47 (6%) Strand = Plus / Plus Query: 66 cagccatggccaccaccgcc---tccagcctcctcaagagctccttc 109 |||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 99 cagcaatggccaccaccgccgcgtccagcctcctcaagtcctccttc 145 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 gccaccccgcgcgccggcg 173 ||||||||||||||||||| Sbjct: 203 gccaccccgcgcgccggcg 221
>dbj|AP001573.3| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1915D9 Length = 155174 Score = 42.1 bits (21), Expect = 0.60 Identities = 21/21 (100%) Strand = Plus / Minus Query: 78 ccaccgcctccagcctcctca 98 ||||||||||||||||||||| Sbjct: 98328 ccaccgcctccagcctcctca 98308
>gb|U17351.1|ZMU17351 Zea mays thiamine biosynthetic enzyme (thi1-2) mRNA, complete cds Length = 1421 Score = 42.1 bits (21), Expect = 0.60 Identities = 41/47 (87%), Gaps = 3/47 (6%) Strand = Plus / Plus Query: 66 cagccatggccaccaccgcc---tccagcctcctcaagagctccttc 109 |||| ||||||||||||||| ||||||||||||||| ||||||| Sbjct: 67 cagcaatggccaccaccgccgcgtccagcctcctcaagtcctccttc 113 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 155 gccaccccgcgcgccggcg 173 ||||||||||||||||||| Sbjct: 171 gccaccccgcgcgccggcg 189
>gb|AC166488.5| Mus musculus chromosome 1, clone RP23-245C4, complete sequence Length = 194413 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 acccatctcagcaaaaaaga 37 |||||||||||||||||||| Sbjct: 78891 acccatctcagcaaaaaaga 78910
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 129 cggcggcccgcaccccgtcc 148 |||||||||||||||||||| Sbjct: 913625 cggcggcccgcaccccgtcc 913606
>ref|XM_428847.1| PREDICTED: Gallus gallus similar to fidgetin (LOC431296), partial mRNA Length = 1925 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 79 caccgcctccagcctcctcaagag 102 ||||||||||| |||||||||||| Sbjct: 173 caccgcctccaacctcctcaagag 196
>gb|AC009119.10| Homo sapiens chromosome 16 clone RP11-483P21, complete sequence Length = 181020 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cccatctcagcaaaaaagaa 38 |||||||||||||||||||| Sbjct: 79449 cccatctcagcaaaaaagaa 79468
>gb|AC125206.3| Mus musculus BAC clone RP23-240G3 from 10, complete sequence Length = 184252 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 42 agcacagctccacacacaccatgg 65 |||| ||||||||||||||||||| Sbjct: 175768 agcagagctccacacacaccatgg 175791
>gb|AC006974.2| Homo sapiens PAC clone RP5-958B11 from 7, complete sequence Length = 90241 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 caccgcctccagcctcctca 98 |||||||||||||||||||| Sbjct: 76316 caccgcctccagcctcctca 76335
>gb|AC116465.8| Mus musculus chromosome 10, clone RP23-64J3, complete sequence Length = 237801 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaaga 37 |||||||||||||||||||| Sbjct: 130325 acccatctcagcaaaaaaga 130306
>ref|XM_965870.1| PREDICTED: Tribolium castaneum similar to RW1 protein (LOC659578), mRNA Length = 6700 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 69 ccatggccaccaccgcctcc 88 |||||||||||||||||||| Sbjct: 1634 ccatggccaccaccgcctcc 1615
>emb|BX640451.1| Bordetella bronchiseptica strain RB50, complete genome; segment 15/16 Length = 343473 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 cgcctcccggcggcggcccg 138 |||||||||||||||||||| Sbjct: 169584 cgcctcccggcggcggcccg 169565
>gb|AC162464.7| Mus musculus 6 BAC RP24-131E12 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 175087 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaaga 37 |||||||||||||||||||| Sbjct: 126811 acccatctcagcaaaaaaga 126792
>gb|AC009036.7| Homo sapiens chromosome 16 clone RP11-142L23, complete sequence Length = 193790 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 19 cccatctcagcaaaaaagaa 38 |||||||||||||||||||| Sbjct: 142588 cccatctcagcaaaaaagaa 142607
>gb|AC153139.5| Mus musculus BAC clone RP23-411M4 from chromosome 13, complete sequence Length = 192541 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 23 tctcagcaaaaaagaagcta 42 |||||||||||||||||||| Sbjct: 43484 tctcagcaaaaaagaagcta 43503
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcaccc 143 |||||||||||||||||||| Sbjct: 9537308 cccggcggcggcccgcaccc 9537289
>gb|AC156799.2| Mus musculus BAC clone RP23-341L15 from chromosome 9, complete sequence Length = 214455 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 62 atggcagccatggccaccac 81 |||||||||||||||||||| Sbjct: 115721 atggcagccatggccaccac 115740
>gb|AC008115.4| Homo sapiens 12 BAC RP11-180M15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 157892 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 20 ccatctcagcaaaaaagaagctag 43 ||||||||| |||||||||||||| Sbjct: 21730 ccatctcagaaaaaaagaagctag 21753
>dbj|AP005428.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0693E08 Length = 157969 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcaccc 143 |||||||||||||||||||| Sbjct: 1526 cccggcggcggcccgcaccc 1507
>dbj|AP004683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0006C08 Length = 151987 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcaccc 143 |||||||||||||||||||| Sbjct: 150869 cccggcggcggcccgcaccc 150850
>gb|BT021720.1| Bos taurus chemokine binding protein 2 (CCBP2), mRNA, complete cds Length = 1341 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 69 ccatggccaccaccgcctcc 88 |||||||||||||||||||| Sbjct: 84 ccatggccaccaccgcctcc 103
>dbj|AK070674.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023063K11, full insert sequence Length = 1208 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cccggcggcggcccgcaccc 143 |||||||||||||||||||| Sbjct: 212 cccggcggcggcccgcaccc 231
>gb|AC113207.8| Mus musculus chromosome 10, clone RP23-323O18, complete sequence Length = 237187 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaaga 37 |||||||||||||||||||| Sbjct: 41837 acccatctcagcaaaaaaga 41818
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 73 ggccaccaccgcctccagcc 92 |||||||||||||||||||| Sbjct: 2210977 ggccaccaccgcctccagcc 2210958
>emb|AJ295339.3|SLI295339 Streptomyces lipmanii nrdA gene for ribonucleotide-diphosphate reductase large subunit chain and partial nrdB gene for ribonucleotide-diphosphate reductase small subunit chain Length = 3615 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 ggcggcggcccgcaccccgt 146 |||||||||||||||||||| Sbjct: 2387 ggcggcggcccgcaccccgt 2406
>gb|L34551.1|RICRITA1A Oryza sativa transcriptional activator protein (RITA-1) mRNA, complete cds Length = 1226 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 cccggcggcggcccgcaccc 143 |||||||||||||||||||| Sbjct: 271 cccggcggcggcccgcaccc 290
>gb|AC112265.5| Mus musculus BAC clone RP23-421N20 from 10, complete sequence Length = 203204 Score = 40.1 bits (20), Expect = 2.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 42 agcacagctccacacacaccatgg 65 |||| ||||||||||||||||||| Sbjct: 201706 agcagagctccacacacaccatgg 201683
>emb|AL683881.12| Mouse DNA sequence from clone RP23-10M6 on chromosome 2, complete sequence Length = 155168 Score = 40.1 bits (20), Expect = 2.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 18 acccatctcagcaaaaaaga 37 |||||||||||||||||||| Sbjct: 116453 acccatctcagcaaaaaaga 116472
>gb|AY665249.1| Pan troglodytes atonal 1 mRNA, complete cds Length = 1071 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 675 gccaccgccgcctccagcctcct 697
>gb|AC164398.8| Mus musculus chromosome 7, clone RP23-307M24, complete sequence Length = 196756 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 ctccacacacaccatggcagcca 71 |||||||| |||||||||||||| Sbjct: 10646 ctccacactcaccatggcagcca 10624
>ref|NM_005172.1| Homo sapiens atonal homolog 1 (Drosophila) (ATOH1), mRNA Length = 1065 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 669 gccaccgccgcctccagcctcct 691
>gb|AY497382.1| Populus balsamifera subsp. trichocarpa microsatellite ORPM_016 sequence Length = 710 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 501 tccagcctcctcaagagct 483
>gb|AC155163.4| Mus musculus BAC clone RP24-341A18 from chromosome 8, complete sequence Length = 207406 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 21314 gccaccactgcctccagcctcct 21336
>gb|BC069578.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone IMAGE:7262382), partial cds Length = 1060 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 664 gccaccgccgcctccagcctcct 686
>gb|AC115005.11| Mus musculus chromosome 16, clone RP24-183G19, complete sequence Length = 188013 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 cgcctccagcctcctcaag 100 ||||||||||||||||||| Sbjct: 63724 cgcctccagcctcctcaag 63742
>gb|AC147229.5| Mus musculus BAC clone RP23-236E9 from chromosome 19, complete sequence Length = 162400 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 131254 ctccacacacaccatggca 131236
>gb|BC069145.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:95430 IMAGE:7217005), complete cds Length = 1066 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 670 gccaccgccgcctccagcctcct 692
>gb|BC052706.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:64707 IMAGE:5702150), complete cds Length = 4306 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 770 gccaccactgcctccagcctcct 748
>gb|BC054800.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:65691 IMAGE:6850337), complete cds Length = 4332 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 787 gccaccactgcctccagcctcct 765
>ref|XM_324420.1| Neurospora crassa OR74A hypothetical protein (NCU05064.1) partial mRNA Length = 2358 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 ||||||| ||||||||||||||| Sbjct: 2312 gccaccaacgcctccagcctcct 2290
>ref|XM_951345.1| Neurospora crassa OR74A hypothetical protein (NCU05064.1) partial mRNA Length = 2358 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 ||||||| ||||||||||||||| Sbjct: 2312 gccaccaacgcctccagcctcct 2290
>gb|AC140443.2| Mus musculus BAC clone RP24-171A23 from chromosome 13, complete sequence Length = 180633 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 111919 ctccacacacaccatggca 111937
>gb|AC126800.3| Mus musculus BAC clone RP24-447D19 from chromosome 8, complete sequence Length = 171823 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 44303 ctccacacacaccatggca 44285
>gb|AY254163.1|AY254163S1 Homo sapiens potassium channel Kv4.3 (KCND3) gene, upstream sequence Length = 1685 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 ctccagcctcctcaagagc 103 ||||||||||||||||||| Sbjct: 612 ctccagcctcctcaagagc 594
>gb|AC113977.16| Mus musculus chromosome 1, clone RP23-161E13, complete sequence Length = 235738 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 211219 ctccacacacaccatggca 211201
>gb|DQ452616.1| Populus trichocarpa isolate PTR-I TIR-NBS-LRR disease resistance-like protein mRNA, complete cds Length = 3429 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 531 tccagcctcctcaagagct 513
>gb|DQ452615.1| Populus balsamifera isolate PBR-I TIR-NBS-LRR disease resistance-like protein mRNA, complete cds Length = 3351 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 561 tccagcctcctcaagagct 543
>gb|AC089983.23| Homo sapiens 12 BAC RP11-818F20 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 204505 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 133592 caccacctcctccagcctcctca 133570
>gb|AC122411.4| Mus musculus BAC clone RP24-143P19 from chromosome 1, complete sequence Length = 182658 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 61595 ctccacacacaccatggca 61577
>emb|CR730462.2|CNS0GQKJ Tetraodon nigroviridis full-length cDNA Length = 1057 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 ccaccaccgcctccagcct 93 ||||||||||||||||||| Sbjct: 445 ccaccaccgcctccagcct 427
>emb|CR727111.2|CNS0GNZH Tetraodon nigroviridis full-length cDNA Length = 1062 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 ccaccaccgcctccagcct 93 ||||||||||||||||||| Sbjct: 445 ccaccaccgcctccagcct 427
>emb|CR724397.2|CNS0GLW3 Tetraodon nigroviridis full-length cDNA Length = 1341 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 ccaccaccgcctccagcct 93 ||||||||||||||||||| Sbjct: 447 ccaccaccgcctccagcct 429
>emb|CR723898.2|CNS0GLI8 Tetraodon nigroviridis full-length cDNA Length = 1056 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 75 ccaccaccgcctccagcct 93 ||||||||||||||||||| Sbjct: 445 ccaccaccgcctccagcct 427
>ref|XM_544491.2| PREDICTED: Canis familiaris hypothetical LOC487365, transcript variant 1 (LOC487365), mRNA Length = 2088 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 cgcctccagcctcctcaag 100 ||||||||||||||||||| Sbjct: 88 cgcctccagcctcctcaag 106
>ref|XM_847602.1| PREDICTED: Canis familiaris hypothetical LOC487365, transcript variant 2 (LOC487365), mRNA Length = 2115 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 cgcctccagcctcctcaag 100 ||||||||||||||||||| Sbjct: 115 cgcctccagcctcctcaag 133
>ref|XM_861063.1| PREDICTED: Canis familiaris hypothetical LOC487365, transcript variant 4 (LOC487365), mRNA Length = 1888 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 cgcctccagcctcctcaag 100 ||||||||||||||||||| Sbjct: 41 cgcctccagcctcctcaag 59
>ref|XM_861049.1| PREDICTED: Canis familiaris hypothetical LOC487365, transcript variant 3 (LOC487365), mRNA Length = 2009 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 82 cgcctccagcctcctcaag 100 ||||||||||||||||||| Sbjct: 118 cgcctccagcctcctcaag 136
>emb|AL512665.11| Human DNA sequence from clone RP11-88H9 on chromosome 1 Contains the 5' end of the KCND3 gen for potassium voltage-gated channel Shal-related subfamily member 3, two novel genes and two CpG islands, complete sequence Length = 169599 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 85 ctccagcctcctcaagagc 103 ||||||||||||||||||| Sbjct: 20956 ctccagcctcctcaagagc 20974
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 116 gtccgcctcccggcggcgg 134 ||||||||||||||||||| Sbjct: 2806758 gtccgcctcccggcggcgg 2806776
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcc 92 ||||||||||||||||||| Sbjct: 1107504 gccaccaccgcctccagcc 1107486
>emb|AL358876.11| Human DNA sequence from clone RP11-431K24 on chromosome 1 Contains the 3' end of a novel gene (FLJ26758), a 52kDa eukaryotic translation initiation factor 2 subunit 3 gamma (EIF2S3) pseudogene and two novel genes, complete sequence Length = 171183 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaag 36 ||||||||||||||||||| Sbjct: 9889 acccatctcagcaaaaaag 9871
>emb|AL159977.10| Human DNA sequence from clone RP11-428O18 on chromosome 13 Contains the RPL21 gene for ribosomal protein L21 (60S ribosomal protein L21, L21), a novel gene for a Ras family protein similar to 1110065D03RIK, a novel gene, the 5' end of novel gene and two CpG islands, complete sequence Length = 173965 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 20 ccatctcagcaaaaaagaa 38 ||||||||||||||||||| Sbjct: 57385 ccatctcagcaaaaaagaa 57367
>gb|AC112496.2| Homo sapiens X BAC RP11-242C19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 166765 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 60 ccatggcagccatggccac 78 ||||||||||||||||||| Sbjct: 141589 ccatggcagccatggccac 141571
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 116 gtccgcctcccggcggcgg 134 ||||||||||||||||||| Sbjct: 758918 gtccgcctcccggcggcgg 758900
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 124 cccggcggcggcccgcacc 142 ||||||||||||||||||| Sbjct: 150875 cccggcggcggcccgcacc 150893
>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29 Length = 248550 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 121 cctcccggcggcggcccgc 139 ||||||||||||||||||| Sbjct: 58814 cctcccggcggcggcccgc 58832
>emb|AJ416708.1|PDE416708 Populus deltoides MER locus, genomic DNA, cultivar S9-2 Length = 95055 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 49562 tccagcctcctcaagagct 49580 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 242 tccagcctcctcaagagct 260
>gb|AC163647.3| Mus musculus BAC clone RP23-214L4 from chromosome 6, complete sequence Length = 197408 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 93150 gccaccactgcctccagcctcct 93172
>gb|AC091078.7| Homo sapiens, clone RP11-164C12, complete sequence Length = 182776 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 102633 caccacctcctccagcctcctca 102655
>gb|AF153342.6| Homo sapiens chromosome 8 clone GS1-265m2 map 8p23, complete sequence Length = 83803 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 cacaccatggcagccatgg 74 ||||||||||||||||||| Sbjct: 11870 cacaccatggcagccatgg 11852
>emb|AJ490334.1|POP490334 Populus balsamifera subsp. trichocarpa mRNA for TIR-NBS disease resistance protein Length = 1970 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 601 tccagcctcctcaagagct 583
>gb|AC079200.6| Homo sapiens chromosome 8, clone RP11-1058B24, complete sequence Length = 117978 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 56 cacaccatggcagccatgg 74 ||||||||||||||||||| Sbjct: 45119 cacaccatggcagccatgg 45137
>gb|AC104444.2| Homo sapiens chromosome 3 clone RP11-420K5, complete sequence Length = 161054 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 30806 caccacctcctccagcctcctca 30784
>gb|AC093839.3| Homo sapiens BAC clone RP11-433K16 from 4, complete sequence Length = 162522 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 78874 caccacctcctccagcctcctca 78852
>gb|AC096739.3| Homo sapiens BAC clone RP11-213G21 from 4, complete sequence Length = 96482 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 40 ctagcacagctccacacacacca 62 ||||||||||||| ||||||||| Sbjct: 62155 ctagcacagctccgcacacacca 62133
>gb|AC087413.5| Homo sapiens BAC clone RP11-680J17 from 4, complete sequence Length = 80701 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 13283 gccaccgccgcctccagcctcct 13305
>gb|AC104664.2| Homo sapiens BAC clone RP11-724H6 from 4, complete sequence Length = 158145 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 148534 caccacctcctccagcctcctca 148556
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 119 cgcctcccggcggcggccc 137 ||||||||||||||||||| Sbjct: 3016727 cgcctcccggcggcggccc 3016709
>gb|AC074254.4| Homo sapiens BAC clone RP11-784D7 from 4, complete sequence Length = 171073 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 56559 caccacctcctccagcctcctca 56581
>gb|CP000249.1| Frankia sp. CcI3, complete genome Length = 5433628 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcaccccgt 146 ||||||||||||||| ||||||| Sbjct: 747884 cccggcggcggcccgtaccccgt 747862
>gb|AC131405.5| Rattus norvegicus BAC CH230-179I7 (Children's Hospital Oakland Research Institute Rat (BN/SsNHsd/MCW) BAC library) complete sequence Length = 217197 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 66 cagccatggccaccaccgcctcc 88 |||||||||||||| |||||||| Sbjct: 194105 cagccatggccaccgccgcctcc 194083
>gb|DQ384228.1| Eragrostis tef short-chain dehydrogenase/reductase gene, partial cds Length = 702 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 124 cccggcggcggcccgcacc 142 ||||||||||||||||||| Sbjct: 495 cccggcggcggcccgcacc 477
>dbj|AK039409.1| Mus musculus adult male spinal cord cDNA, RIKEN full-length enriched library, clone:A330040N16 product:unclassifiable, full insert sequence Length = 2802 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 478 gccaccactgcctccagcctcct 500
>dbj|AK012935.1| Mus musculus 10, 11 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2810049M13 product:NAC-1 PROTEIN homolog [Rattus norvegicus], full insert sequence Length = 2887 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 770 gccaccactgcctccagcctcct 748
>gb|AY958432.1| Homo sapiens methionine sulfoxide reductase gene, complete cds, alternatively spliced Length = 379048 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 56 cacaccatggcagccatgg 74 ||||||||||||||||||| Sbjct: 188892 cacaccatggcagccatgg 188874
>dbj|AK015764.1| Mus musculus adult male testis cDNA, RIKEN full-length enriched library, clone:4930511N13 product:unclassifiable, full insert sequence Length = 1276 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 340 gccaccactgcctccagcctcct 362
>gb|AC020552.4|AC020552 Homo sapiens BAC clone RP11-431K24 from 1, complete sequence Length = 178820 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaag 36 ||||||||||||||||||| Sbjct: 9889 acccatctcagcaaaaaag 9871
>gb|AC116654.4| Homo sapiens BAC clone RP11-1278P22 from 2, complete sequence Length = 118716 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 63223 caccacctcctccagcctcctca 63245
>gb|AC107739.9| Mus musculus chromosome 7, clone RP23-345M1, complete sequence Length = 205227 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 49 ctccacacacaccatggcagcca 71 |||||||| |||||||||||||| Sbjct: 120207 ctccacactcaccatggcagcca 120185
>gb|AC009958.3| Homo sapiens BAC clone RP11-316G9 from 2, complete sequence Length = 211201 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 976 caccacctcctccagcctcctca 998
>gb|AC073416.8| Homo sapiens BAC clone RP11-136K15 from 2, complete sequence Length = 133529 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 132505 caccacctcctccagcctcctca 132527
>gb|AE004763.1| Pseudomonas aeruginosa PAO1, section 324 of 529 of the complete genome Length = 11791 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 155 gccaccccgcgcgccggcg 173 ||||||||||||||||||| Sbjct: 6806 gccaccccgcgcgccggcg 6788
>gb|AC092058.3| Homo sapiens chromosome 3 clone RP11-667E17, complete sequence Length = 200898 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 44644 caccacctcctccagcctcctca 44666
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 66 cagccatggccaccaccgcctcc 88 ||||||||||| ||||||||||| Sbjct: 670003 cagccatggcctccaccgcctcc 669981
>gb|AC009960.10| Homo sapiens BAC clone RP11-354N12 from 2, complete sequence Length = 207983 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 149465 caccacctcctccagcctcctca 149443
>dbj|AP001168.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, clone:P0425F02 Length = 176979 Score = 38.2 bits (19), Expect = 9.4 Identities = 26/27 (96%), Gaps = 1/27 (3%) Strand = Plus / Minus Query: 49 ctccacacacaccatggcagccatggc 75 |||||||||||| |||||||||||||| Sbjct: 76544 ctccacacacac-atggcagccatggc 76519
>emb|AL929555.20| Mouse DNA sequence from clone RP24-427F7 on chromosome 2, complete sequence Length = 155137 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 18 acccatctcagcaaaaaag 36 ||||||||||||||||||| Sbjct: 123050 acccatctcagcaaaaaag 123032
>gb|BC069604.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:97163 IMAGE:7262406), complete cds Length = 1065 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 669 gccaccgccgcctccagcctcct 691
>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence Length = 3716413 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 79 caccgcctccagcctcctcaaga 101 |||||||||||||||| |||||| Sbjct: 854268 caccgcctccagcctcgtcaaga 854290
>gb|BC069594.1| Homo sapiens atonal homolog 1 (Drosophila), mRNA (cDNA clone MGC:97152 IMAGE:7262394), complete cds Length = 1065 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 669 gccaccgccgcctccagcctcct 691
>emb|AL445383.5|CNS07ECZ Human chromosome 14 DNA sequence BAC R-88E18 of library RPCI-11 from chromosome 14 of Homo sapiens (Human), complete sequence Length = 172914 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 73221 caccacctcctccagcctcctca 73243
>gb|BC048157.1| Mus musculus BTB (POZ) domain containing 14B, mRNA (cDNA clone MGC:61327 IMAGE:5697941), complete cds Length = 4299 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 760 gccaccactgcctccagcctcct 738
>ref|NM_001012432.1| Pan troglodytes atonal 1 (ATOH1), mRNA Length = 1071 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 675 gccaccgccgcctccagcctcct 697
>gb|AF137071.1|AF137071 Homo sapiens Kv4.3 potassium channel gene, promoter region, partial sequence Length = 1832 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 ctccagcctcctcaagagc 103 ||||||||||||||||||| Sbjct: 638 ctccagcctcctcaagagc 620
>gb|BC099810.1| Rattus norvegicus ring finger protein 126, mRNA (cDNA clone MGC:124770 IMAGE:5621533), complete cds Length = 1450 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 66 cagccatggccaccaccgcctcc 88 |||||||||||||| |||||||| Sbjct: 66 cagccatggccaccgccgcctcc 44
>gb|AC005381.1|AC005381 Homo sapiens chromosome 19, cosmid F19926, complete sequence Length = 41378 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 5218 caccacctcctccagcctcctca 5240
>ref|NM_001033702.1| Rattus norvegicus ring finger protein 126 (Rnf126), mRNA Length = 1450 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 66 cagccatggccaccaccgcctcc 88 |||||||||||||| |||||||| Sbjct: 66 cagccatggccaccgccgcctcc 44
>gb|AC002131.1|F12F1 Arabidopsis thaliana chromosome 1 BAC F12F1 sequence, complete sequence Length = 123386 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 26 cagcaaaaaagaagctagc 44 ||||||||||||||||||| Sbjct: 60573 cagcaaaaaagaagctagc 60591
>ref|NM_025788.2| Mus musculus BTB (POZ) domain containing 14B (Btbd14b), mRNA Length = 4299 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 760 gccaccactgcctccagcctcct 738
>ref|NG_000834.1| Homo sapiens immunoglobulin kappa locus, proximal V-cluster and J-C cluster (IGK-proximal) on chromosome 2 Length = 515442 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 236723 caccacctcctccagcctcctca 236701
>ref|NG_000833.1| Homo sapiens immunoglobulin kappa locus, distal duplicated V-cluster (IGK-distal) on chromosome 2 Length = 407661 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 153163 caccacctcctccagcctcctca 153185
>gb|AC132952.3| Mus musculus BAC clone RP24-175H8 from 19, complete sequence Length = 177345 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 38788 ctccacacacaccatggca 38770
>gb|AC092266.4| Homo sapiens chromosome 5 clone RP11-24P24, complete sequence Length = 171601 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 17 cacccatctcagcaaaaaa 35 ||||||||||||||||||| Sbjct: 130089 cacccatctcagcaaaaaa 130071
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcc 92 ||||||||||||||||||| Sbjct: 2587546 gccaccaccgcctccagcc 2587564
>gb|U61148.1|HSU61148 Human atonal homolog 1 (Hath1) gene, complete cds Length = 1572 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||| |||||||||||||||| Sbjct: 1031 gccaccgccgcctccagcctcct 1053
>gb|DQ270670.1| Populus trichocarpa isolate S-272 TIR-NBS disease resistance-like protein mRNA, complete cds Length = 3441 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 567 tccagcctcctcaagagct 549
>gb|DQ270667.1| Populus trichocarpa isolate S-117-2 TIR-NBS disease resistance-like protein mRNA, complete cds Length = 2658 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 276 tccagcctcctcaagagct 258
>gb|DQ270664.1| Populus trichocarpa isolate LG-XIX-2 TIR-NBS disease resistance-like protein mRNA, complete cds Length = 2208 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 86 tccagcctcctcaagagct 104 ||||||||||||||||||| Sbjct: 564 tccagcctcctcaagagct 546
>gb|AC120785.13| Mus musculus chromosome 8, clone RP23-336P3, complete sequence Length = 238405 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 49 ctccacacacaccatggca 67 ||||||||||||||||||| Sbjct: 226074 ctccacacacaccatggca 226056
>gb|AC145556.4| Mus musculus BAC clone RP23-308E7 from chromosome 8, complete sequence Length = 178400 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 74 gccaccaccgcctccagcctcct 96 |||||||| |||||||||||||| Sbjct: 147020 gccaccactgcctccagcctcct 147042
>gb|AC026709.7| Homo sapiens chromosome 5 clone CTD-2084I18, complete sequence Length = 139402 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Plus Query: 17 cacccatctcagcaaaaaa 35 ||||||||||||||||||| Sbjct: 136496 cacccatctcagcaaaaaa 136514
>dbj|AP001243.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:KB393C4 Length = 96500 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 75490 caccacctcctccagcctcctca 75468
>dbj|AP001242.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:KB225F1 Length = 42854 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Plus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 10656 caccacctcctccagcctcctca 10678
>dbj|AP001227.3| Homo sapiens genomic DNA, chromosome 2p11.2, clone:cos256 Length = 28805 Score = 38.2 bits (19), Expect = 9.4 Identities = 22/23 (95%) Strand = Plus / Minus Query: 76 caccaccgcctccagcctcctca 98 ||||||| ||||||||||||||| Sbjct: 23456 caccacctcctccagcctcctca 23434
>dbj|AB083112.1| Galactomyces geotrichum gene for endo-polygalacturonase Ap2PG1, complete cds Length = 1793 Score = 38.2 bits (19), Expect = 9.4 Identities = 19/19 (100%) Strand = Plus / Minus Query: 59 accatggcagccatggcca 77 ||||||||||||||||||| Sbjct: 273 accatggcagccatggcca 255 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,249,460 Number of Sequences: 3902068 Number of extensions: 2249460 Number of successful extensions: 171999 Number of sequences better than 10.0: 165 Number of HSP's better than 10.0 without gapping: 165 Number of HSP's successfully gapped in prelim test: 2 Number of HSP's that attempted gapping in prelim test: 169644 Number of HSP's gapped (non-prelim): 2363 length of query: 190 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 168 effective length of database: 17,147,199,772 effective search space: 2880729561696 effective search space used: 2880729561696 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
