| Clone Name | baet81f07 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_467970.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1612 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 233 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 234 tccgccgcgaggtccttc 251
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 32341653 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 32341594 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 32341593 tccgccgcgaggtccttc 32341576
>dbj|AP005287.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1004_A11 Length = 132352 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 117485 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 117426 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 117425 tccgccgcgaggtccttc 117408
>dbj|AP004125.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1767_D02 Length = 139145 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Minus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 3166 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 3107 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 3106 tccgccgcgaggtccttc 3089
>dbj|AK069611.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023022H13, full insert sequence Length = 1612 Score = 99.6 bits (50), Expect = 2e-18 Identities = 71/78 (91%) Strand = Plus / Plus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||| Sbjct: 174 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacacctcc 233 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 234 tccgccgcgaggtccttc 251
>dbj|AB016065.1| Oryza sativa (japonica cultivar-group) mRNA for mitochondrial phosphate transporter, complete cds Length = 1552 Score = 91.7 bits (46), Expect = 6e-16 Identities = 70/78 (89%) Strand = Plus / Plus Query: 78 gcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctcc 137 ||||||||||||||||||| ||||||||| ||||||||||| |||||||| ||| ||||| Sbjct: 139 gcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctttacacctcc 198 Query: 138 cccgccgcgcgctccttc 155 |||||||| | |||||| Sbjct: 199 tccgccgcgaggtccttc 216
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 89.7 bits (45), Expect = 2e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 73 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 132 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 5649173 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 5649232 Query: 133 c 133 | Sbjct: 5649233 c 5649233
>dbj|AP004687.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0021C04 Length = 162115 Score = 89.7 bits (45), Expect = 2e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 73 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 132 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 41320 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 41379 Query: 133 c 133 | Sbjct: 41380 c 41380
>dbj|AK066979.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090N24, full insert sequence Length = 1410 Score = 89.7 bits (45), Expect = 2e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 73 cggcggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctact 132 |||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||| Sbjct: 79 cggcggcgatggcgctctccgaccgctcccgcgagtcgctcctgccgagcttcctctact 138 Query: 133 c 133 | Sbjct: 139 c 139
>dbj|AB016064.1| Zea mays mRNA for mitochondrial phosphate transporter, complete cds Length = 1444 Score = 89.7 bits (45), Expect = 2e-15 Identities = 57/61 (93%) Strand = Plus / Plus Query: 77 ggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctactcctc 136 |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| |||| Sbjct: 45 ggcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctacgcctc 104 Query: 137 c 137 | Sbjct: 105 c 105
>gb|AY104226.1| Zea mays PCO060710 mRNA sequence Length = 1639 Score = 85.7 bits (43), Expect = 4e-14 Identities = 52/55 (94%) Strand = Plus / Plus Query: 77 ggcgatggcgctctccgacctctcccgcgactcgctcctccccagcttcctctac 131 |||||||||||||||||||| ||||||||| ||||||||||| |||||||||||| Sbjct: 137 ggcgatggcgctctccgaccgctcccgcgagtcgctcctcccgagcttcctctac 191
>gb|AC121363.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0036C12, complete sequence Length = 145517 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Minus Query: 131 ctcctcccccgccgcgcgctcct 153 ||||||||||||||||||||||| Sbjct: 52403 ctcctcccccgccgcgcgctcct 52381
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Minus Query: 131 ctcctcccccgccgcgcgctcct 153 ||||||||||||||||||||||| Sbjct: 23422160 ctcctcccccgccgcgcgctcct 23422138
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Minus Query: 131 ctcctcccccgccgcgcgctcct 153 ||||||||||||||||||||||| Sbjct: 16728293 ctcctcccccgccgcgcgctcct 16728271 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ctctactcctcccccgccgcgcgc 149 |||| ||||||||||||||||||| Sbjct: 5776870 ctctcctcctcccccgccgcgcgc 5776893
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Minus Query: 131 ctcctcccccgccgcgcgctcct 153 ||||||||||||||||||||||| Sbjct: 23350351 ctcctcccccgccgcgcgctcct 23350329
>emb|AL731784.3|CNS08C88 Oryza sativa chromosome 12, . BAC OSJNBa0016C14 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 162261 Score = 46.1 bits (23), Expect = 0.031 Identities = 23/23 (100%) Strand = Plus / Plus Query: 131 ctcctcccccgccgcgcgctcct 153 ||||||||||||||||||||||| Sbjct: 79999 ctcctcccccgccgcgcgctcct 80021
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 92 cgacctctcccgcgactcgct 112 ||||||||||||||||||||| Sbjct: 285209 cgacctctcccgcgactcgct 285229
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgccgcgcgctccttcaccg 159 ||||||||||||||||||||| Sbjct: 11672725 ccgccgcgcgctccttcaccg 11672745 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctcc 152 |||||||||||||||||||| Sbjct: 6235511 cctcccccgccgcgcgctcc 6235530
>gb|AC118674.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0093J20, from chromosome 3, complete sequence Length = 148635 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgccgcgcgctccttcaccg 159 ||||||||||||||||||||| Sbjct: 61820 ccgccgcgcgctccttcaccg 61840
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggcccggcggcgatggcgctc 89 ||||||||||||||||||||| Sbjct: 23498208 ggcccggcggcgatggcgctc 23498188
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 139 ccgccgcgcgctccttcaccg 159 ||||||||||||||||||||| Sbjct: 11669488 ccgccgcgcgctccttcaccg 11669508 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctcc 152 |||||||||||||||||||| Sbjct: 6234724 cctcccccgccgcgcgctcc 6234743
>dbj|AK071044.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023081F09, full insert sequence Length = 1809 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Plus Query: 69 ggcccggcggcgatggcgctc 89 ||||||||||||||||||||| Sbjct: 97 ggcccggcggcgatggcgctc 117
>gb|AF081923.1|AF081923 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit mRNA, complete cds Length = 2132 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcccccgccgcgcgctcc 152 ||||||||||||||||||||| Sbjct: 143 tcctcccccgccgcgcgctcc 123
>gb|AF081922.1|AF081922 Oryza sativa protein phosphatase 2A 55 kDa B regulatory subunit gene, complete cds Length = 9386 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 132 tcctcccccgccgcgcgctcc 152 ||||||||||||||||||||| Sbjct: 1381 tcctcccccgccgcgcgctcc 1361
>emb|AL606441.3|OSJN00012 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0089K21, complete sequence Length = 139298 Score = 42.1 bits (21), Expect = 0.49 Identities = 21/21 (100%) Strand = Plus / Minus Query: 69 ggcccggcggcgatggcgctc 89 ||||||||||||||||||||| Sbjct: 54111 ggcccggcggcgatggcgctc 54091
>gb|BC017454.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:20429 IMAGE:4647090), complete cds Length = 1004 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 41 cggcccggcggcgatggcgc 60
>gb|BC022334.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:22779 IMAGE:4703567), complete cds Length = 930 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 23 cggcccggcggcgatggcgc 42
>gb|AC132486.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0473H02, complete sequence Length = 141027 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 126 ctctactcctcccccgccgcgcgc 149 |||| ||||||||||||||||||| Sbjct: 99244 ctctcctcctcccccgccgcgcgc 99267
>ref|XM_752711.1| Ustilago maydis 521 hypothetical protein (UM01657.1) partial mRNA Length = 5787 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 gcgcccggatctctcggccc 73 |||||||||||||||||||| Sbjct: 4126 gcgcccggatctctcggccc 4145
>gb|BC047763.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:6201042), with apparent retained intron Length = 1343 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 30 cggcccggcggcgatggcgc 49
>gb|BC008183.1| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone MGC:16998 IMAGE:4183256), complete cds Length = 994 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 24 cggcccggcggcgatggcgc 43
>gb|AC144831.2| Homo sapiens chromosome 17, clone XXfos-86664F1, complete sequence Length = 37443 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 109 cgctcctccccagcttcctc 128 |||||||||||||||||||| Sbjct: 35730 cgctcctccccagcttcctc 35711
>gb|BC002516.2| Homo sapiens 5', 3'-nucleotidase, cytosolic, mRNA (cDNA clone IMAGE:3140193), partial cds Length = 907 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 18 cggcccggcggcgatggcgc 37
>emb|BX572607.1| Rhodopseudomonas palustris CGA009 complete genome; segment 15/16 Length = 345012 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 66 ctcggcccggcggcgatggcgctc 89 ||||||||||| |||||||||||| Sbjct: 224856 ctcggcccggccgcgatggcgctc 224833
>dbj|AK094291.1| Homo sapiens cDNA FLJ36972 fis, clone BRACE2006245 Length = 2161 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 838 cggcccggcggcgatggcgc 819
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 67 tcggcccggcggcgatggcgctct 90 |||||||||||||||| ||||||| Sbjct: 37337 tcggcccggcggcgattgcgctct 37360
>ref|NM_014595.1| Homo sapiens 5', 3'-nucleotidase, cytosolic (NT5C), mRNA Length = 970 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>tpg|BK000192.1| TPA: TPA_exp: Homo sapiens cytosolic 5'(3')-deoxyribonucleotidase (NT5C) gene, complete cds Length = 1554 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>gb|AC022211.5|AC022211 Homo sapiens BAC clone RP11-649A18 from 17, complete sequence Length = 191155 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 21381 cggcccggcggcgatggcgc 21362
>gb|AC140006.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAa0090D11, complete sequence Length = 115403 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctcc 152 |||||||||||||||||||| Sbjct: 74122 cctcccccgccgcgcgctcc 74141
>gb|AC104474.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0024O21, complete sequence Length = 155651 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctcc 152 |||||||||||||||||||| Sbjct: 48719 cctcccccgccgcgcgctcc 48738
>gb|AF154829.2|AF154829 Homo sapiens deoxy-5'-nucleotidase mRNA, complete cds Length = 970 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>dbj|AK000419.1| Homo sapiens cDNA FLJ20412 fis, clone KAT02154 Length = 970 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 68 cggcccggcggcgatggcgc 87 |||||||||||||||||||| Sbjct: 63 cggcccggcggcgatggcgc 82
>dbj|AK107170.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-124-G02, full insert sequence Length = 1693 Score = 40.1 bits (20), Expect = 1.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctcc 152 |||||||||||||||||||| Sbjct: 1067 cctcccccgccgcgcgctcc 1086
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 1.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 72 ccggcggcgatggcgctctccgac 95 |||||||||||||||||| ||||| Sbjct: 2689174 ccggcggcgatggcgctcgccgac 2689151
>ref|NM_183783.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 843 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 259 ggcgctctccgacctctcc 277
>ref|NM_183782.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 366 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 186 ggcgctctccgacctctcc 168
>gb|AC120307.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0074E19 map R1938, complete sequence Length = 160847 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 cggcggcgatggcgctctc 91 ||||||||||||||||||| Sbjct: 5911 cggcggcgatggcgctctc 5893
>gb|AC114651.11| Mus musculus chromosome 1, clone RP24-153E5, complete sequence Length = 176384 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 108 tcgctcctccccagcttcc 126 ||||||||||||||||||| Sbjct: 103566 tcgctcctccccagcttcc 103548
>gb|BC013636.1| Mus musculus liver glycogen phosphorylase, mRNA (cDNA clone MGC:19091 IMAGE:4196237), complete cds Length = 2780 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2155 ctcctccccagcttcctct 2137
>ref|NM_133198.1| Mus musculus liver glycogen phosphorylase (Pygl), mRNA Length = 2780 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2155 ctcctccccagcttcctct 2137
>gb|AC147241.2| Mus musculus BAC clone RP23-417C21 from chromosome 12, complete sequence Length = 199956 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 56783 ctcctccccagcttcctct 56801
>ref|XM_749102.1| Aspergillus fumigatus Af293 hypothetical protein (Afu3g14310) partial mRNA Length = 3111 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 127 tctactcctcccccgccgc 145 ||||||||||||||||||| Sbjct: 2599 tctactcctcccccgccgc 2617
>gb|AC112146.3| Mus musculus BAC clone RP23-101G11 from 12, complete sequence Length = 188819 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 166683 ctcctccccagcttcctct 166701
>gb|AE014075.1| Escherichia coli CFT073, complete genome Length = 5231428 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 gcccggcggcgatggcgctctcc 92 ||||||||| ||||||||||||| Sbjct: 2837332 gcccggcggtgatggcgctctcc 2837310
>gb|CP000243.1| Escherichia coli UTI89, complete genome Length = 5065741 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 70 gcccggcggcgatggcgctctcc 92 ||||||||| ||||||||||||| Sbjct: 2716218 gcccggcggtgatggcgctctcc 2716196
>emb|AL645608.30| Human DNA sequence from clone RP11-54O7 on chromosome 1 Contains three novel genes, a novel gene (MGC45873), a novel gene (DKFZP564C186), a novel gene, a novel gene (DKFZP434H2010), a novel gene (MGC13275), the gene for bHLH factor Hes4 (Hes4), a ribosomal protein L39 (RPL39) pseudogene, a novel gene, the G1P2 gene for interferon alpha-inducible protein (clone IFI-15K), the AGRN gene for agrin, two novel genes and fifteen CpG islands, complete sequence Length = 186759 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 133 cctcccccgccgcgcgctc 151 ||||||||||||||||||| Sbjct: 49194 cctcccccgccgcgcgctc 49176
>emb|AJ720822.1| Gallus gallus mRNA for hypothetical protein, clone 26j3 Length = 2643 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 115 tccccagcttcctctactcctcc 137 ||||||||||||||| ||||||| Sbjct: 180 tccccagcttcctctgctcctcc 158
>ref|NM_001006146.1| Gallus gallus similar to step II splicing factor SLU7 (LOC416157), mRNA Length = 2643 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Minus Query: 115 tccccagcttcctctactcctcc 137 ||||||||||||||| ||||||| Sbjct: 180 tccccagcttcctctgctcctcc 158
>gb|CP000133.1| Rhizobium etli CFN 42, complete genome Length = 4381608 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 66 ctcggcccggcggcgatggcgct 88 ||||||||||||||||| ||||| Sbjct: 605290 ctcggcccggcggcgatcgcgct 605312
>gb|AF288783.1| Mus musculus glycogen phosphorylase mRNA, complete cds Length = 2652 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2163 ctcctccccagcttcctct 2145
>dbj|AK140321.1| Mus musculus 4 days neonate male adipose cDNA, RIKEN full-length enriched library, clone:B430109B05 product:liver glycogen phosphorylase, full insert sequence Length = 2736 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2168 ctcctccccagcttcctct 2150
>dbj|AK145989.1| Mus musculus 12 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530022L14 product:liver glycogen phosphorylase, full insert sequence Length = 2818 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2222 ctcctccccagcttcctct 2204
>dbj|AK149491.1| Mus musculus adult male liver tumor cDNA, RIKEN full-length enriched library, clone:C730025I07 product:liver glycogen phosphorylase, full insert sequence Length = 2992 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2396 ctcctccccagcttcctct 2378
>dbj|AK167337.1| Mus musculus 13 days pregnant adult female placenta cDNA, RIKEN full-length enriched library, clone:I530005J15 product:liver glycogen phosphorylase, full insert sequence Length = 2764 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 111 ctcctccccagcttcctct 129 ||||||||||||||||||| Sbjct: 2168 ctcctccccagcttcctct 2150
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 cggcggcgatggcgctctc 91 ||||||||||||||||||| Sbjct: 2229912 cggcggcgatggcgctctc 2229894
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 12263208 ggcgctctccgacctctcc 12263226 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 12253096 ggcgctctccgacctctcc 12253114
>gb|AF276154.1|AF276154 Scaphirhynchus platorynchus microsatellite Spl-46 sequence Length = 485 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 110 gctcctccccagcttcctc 128 ||||||||||||||||||| Sbjct: 358 gctcctccccagcttcctc 340
>ref|XM_218963.3| PREDICTED: Rattus norvegicus Rho guanine nucleotide exchange factor (GEF) 17 (predicted) (Arhgef17_predicted), mRNA Length = 6220 Score = 38.2 bits (19), Expect = 7.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 38 ccgcccccgcgaatccgcgcccg 60 ||||||||||||| ||||||||| Sbjct: 216 ccgcccccgcgaagccgcgcccg 238
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gccgcgcgctccttcaccg 159 ||||||||||||||||||| Sbjct: 7177212 gccgcgcgctccttcaccg 7177230 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 80 gatggcgctctccgacctc 98 ||||||||||||||||||| Sbjct: 6657957 gatggcgctctccgacctc 6657939
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 133 cctcccccgccgcgcgctc 151 ||||||||||||||||||| Sbjct: 3771776 cctcccccgccgcgcgctc 3771794
>dbj|AP002953.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0426D06 Length = 162173 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 87834 ggcgctctccgacctctcc 87852 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 83 ggcgctctccgacctctcc 101 ||||||||||||||||||| Sbjct: 77722 ggcgctctccgacctctcc 77740
>dbj|AK102442.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033093M12, full insert sequence Length = 916 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 cggcggcgatggcgctctc 91 ||||||||||||||||||| Sbjct: 71 cggcggcgatggcgctctc 89
>dbj|AK100066.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013161L12, full insert sequence Length = 996 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 73 cggcggcgatggcgctctc 91 ||||||||||||||||||| Sbjct: 71 cggcggcgatggcgctctc 89
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence Length = 5888780 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 88 tctccgacctctcccgcga 106 ||||||||||||||||||| Sbjct: 3148746 tctccgacctctcccgcga 3148764
>gb|AC132613.4| Mus musculus BAC clone RP23-285C21 from 6, complete sequence Length = 221317 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 27 ctcagaaagcaccgccccc 45 ||||||||||||||||||| Sbjct: 29171 ctcagaaagcaccgccccc 29189
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 134 ctcccccgccgcgcgctcc 152 ||||||||||||||||||| Sbjct: 2063290 ctcccccgccgcgcgctcc 2063272
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Minus Query: 73 cggcggcgatggcgctctc 91 ||||||||||||||||||| Sbjct: 2237693 cggcggcgatggcgctctc 2237675
>gb|M79457.1|RHBFUMC Bradyrhizobium japonicum fumarase C gene, complete cds Length = 1647 Score = 38.2 bits (19), Expect = 7.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 gccgcgcgctccttcaccg 159 ||||||||||||||||||| Sbjct: 1231 gccgcgcgctccttcaccg 1249 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 859,645 Number of Sequences: 3902068 Number of extensions: 859645 Number of successful extensions: 81470 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 82 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79189 Number of HSP's gapped (non-prelim): 2281 length of query: 159 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 137 effective length of database: 17,147,199,772 effective search space: 2349166368764 effective search space used: 2349166368764 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)