ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet81f04 |
|---|---|
| Clone Library Name | barley_pub |
>EXB1A_MAIZE (P58738) Beta-expansin 1a precursor (Pollen allergen Zea m 1) (Zea| m I) Length = 269 Score = 75.5 bits (184), Expect = 3e-14 Identities = 33/52 (63%), Positives = 38/52 (73%) Frame = +3 Query: 183 NVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 N+T T Y G W ARATWYGQPNGAG DNGGACG K+ N P++ MT+CG Sbjct: 34 NIT--TNYNGKWLTARATWYGQPNGAGAPDNGGACGIKNVNLPPYSGMTACG 83
>MPAL1_LOLPR (P14946) Pollen allergen Lol p 1 precursor (Lol p I) (Allergen R7)| Length = 263 Score = 69.3 bits (168), Expect = 2e-12 Identities = 28/52 (53%), Positives = 37/52 (71%) Frame = +3 Query: 183 NVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 N+T +Y W A++TWYG+P GAGP DNGGACG+K+ ++ PF MT CG Sbjct: 32 NIT--AEYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKNVDKAPFNGMTGCG 81
>MPAP1_PHAAQ (Q41260) Major pollen allergen Pha a 1 precursor (Pha a I)| Length = 269 Score = 68.6 bits (166), Expect = 4e-12 Identities = 28/52 (53%), Positives = 36/52 (69%) Frame = +3 Query: 183 NVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 N+T +Y W A++TWYG+P GAGP DNGGACG+K ++ PF MT CG Sbjct: 38 NIT--AEYGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKAPFNGMTGCG 87
>MPAP1_PHLPR (P43213) Pollen allergen Phl p 1 precursor (Phl p I)| Length = 263 Score = 68.6 bits (166), Expect = 4e-12 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +3 Query: 204 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 Y W A++TWYG+P GAGP DNGGACG+K ++ PF+ MT CG Sbjct: 37 YGDKWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCG 81
>MPAH1_HOLLA (P43216) Major pollen allergen Hol l 1 precursor (Hol l I) (Hol l| 1.0101 and 1.0102) Length = 265 Score = 68.6 bits (166), Expect = 4e-12 Identities = 26/45 (57%), Positives = 33/45 (73%) Frame = +3 Query: 204 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 Y W A++TWYG+P GAGP DNGGACG+K ++ PF+ MT CG Sbjct: 39 YGDEWLDAKSTWYGKPTGAGPKDNGGACGYKDVDKPPFSGMTGCG 83
>MPAC1_CYNDA (O04701) Major pollen allergen Cyn d 1| Length = 246 Score = 60.1 bits (144), Expect = 1e-09 Identities = 26/46 (56%), Positives = 32/46 (69%), Gaps = 1/46 (2%) Frame = +3 Query: 204 YWGPWTPARATWYGQ-PNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 Y W ARAT+YG P GA PDD+GGACG+K ++ PF MT+CG Sbjct: 14 YGSKWLEARATFYGSNPRGAAPDDHGGACGYKDVDKPPFDGMTACG 59
>MPAO1_ORYSA (Q40638) Major pollen allergen Ory s 1 precursor (Ory s I)| Length = 263 Score = 48.9 bits (115), Expect = 3e-06 Identities = 23/52 (44%), Positives = 28/52 (53%) Frame = +3 Query: 183 NVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTSCG 338 N+T T Y W AR +P P DNGGACG+K ++ PF M SCG Sbjct: 32 NIT--TSYGDKWLEARPPGMVRPRVLAPKDNGGACGYKDVDKAPFLGMNSCG 81
>EXPB2_ARATH (Q9SHY6) Putative beta-expansin 2 precursor (AtEXPB2) (At-EXPB2)| (Ath-ExpBeta-1.4) Length = 273 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/53 (45%), Positives = 31/53 (58%), Gaps = 1/53 (1%) Frame = +3 Query: 183 NVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKH-TNQYPFASMTSCG 338 N++ AT W+ A +TWYG P G G D GGACG+ + Q PF+ M S G Sbjct: 36 NISAATTSDSDWSIAGSTWYGNPTGYGSD--GGACGYGNAVAQPPFSKMVSAG 86
>EXPB3_ARATH (Q9M0I2) Beta-expansin 3 precursor (AtEXPB3) (At-EXPB3)| (Ath-ExpBeta-1.6) Length = 264 Score = 43.1 bits (100), Expect = 2e-04 Identities = 18/26 (69%), Positives = 19/26 (73%) Frame = +3 Query: 216 WTPARATWYGQPNGAGPDDNGGACGF 293 W PA ATWYG PNG G D GGACG+ Sbjct: 36 WLPAVATWYGSPNGDGSD--GGACGY 59
>EXPB1_ARATH (Q9SKU2) Beta-expansin 1 precursor (AtEXPB1) (At-EXPB1)| (Ath-ExpBeta-1.5) Length = 271 Score = 37.0 bits (84), Expect = 0.012 Identities = 15/26 (57%), Positives = 17/26 (65%) Frame = +3 Query: 216 WTPARATWYGQPNGAGPDDNGGACGF 293 W PA ATWYG G G +GGACG+ Sbjct: 40 WLPATATWYGSAEGDG--SSGGACGY 63
>EXPB5_ARATH (Q9M203) Putative beta-expansin 5 precursor (AtEXPB5) (At-EXPB5)| (Ath-ExpBeta-1.3) Length = 264 Score = 35.0 bits (79), Expect = 0.046 Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 1/42 (2%) Frame = +3 Query: 216 WTPARATWYGQPNGAGPDDNGGACGF-KHTNQYPFASMTSCG 338 W A TWYG + GP GGACG+ ++P+ M S G Sbjct: 34 WNTAGITWYG--DREGPGTTGGACGYGDAVAKHPYRCMVSAG 73
>TEGU_HHV11 (P10220) Large tegument protein (Virion protein UL36)| Length = 3164 Score = 34.7 bits (78), Expect = 0.060 Identities = 28/79 (35%), Positives = 36/79 (45%), Gaps = 5/79 (6%) Frame = -1 Query: 280 PPLSSGPAPLGWPYQVALAGVQGPQYLVASVTLRSTSKGEASV-----ALRSTAPVTARK 116 PPL+SGPAP P +V V GPQ + + S S+ S+ TAPV R Sbjct: 2779 PPLTSGPAPT--PPRVP---VGGPQRRLTRPAVASLSESRESLPSPWDPADPTAPVLGRN 2833 Query: 115 QRSAASTAREGREPMPRAV 59 S++ G P P AV Sbjct: 2834 PAEPTSSSPAGPSPPPPAV 2852
>EXPB4_ARATH (Q9SHD1) Putative beta-expansin 4 precursor (AtEXPB4) (At-EXPB4)| (Ath-ExpBeta-1.1) Length = 259 Score = 33.9 bits (76), Expect = 0.10 Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%) Frame = +3 Query: 225 ARATWYGQPNGAGPDDNGGACGF-KHTNQYPFASMTSCG 338 A TWYG+P GAG GGACG+ P +M S G Sbjct: 36 AGVTWYGEPFGAG--STGGACGYGSAVANPPLYAMVSAG 72
>EXPA9_ARATH (Q9LZ99) Alpha-expansin 9 precursor (AtEXPA9) (At-EXP9) (AtEx9)| (Ath-ExpAlpha-1.10) Length = 258 Score = 33.5 bits (75), Expect = 0.13 Identities = 14/28 (50%), Positives = 19/28 (67%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGF 293 GPW A AT+YG+ + +G GGACG+ Sbjct: 30 GPWINAHATFYGEADASG--TMGGACGY 55
>EXP26_ARATH (Q9FL78) Putative alpha-expansin 26 precursor (AtEXPA26) (At-EXP26)| (AtEx26) (Ath-ExpAlpha-1.16) Length = 279 Score = 33.1 bits (74), Expect = 0.18 Identities = 21/55 (38%), Positives = 28/55 (50%), Gaps = 1/55 (1%) Frame = +3 Query: 132 GAVDLNATDASPFDVDLNVTDATKYWGP-WTPARATWYGQPNGAGPDDNGGACGF 293 GA+ NA +A + D +K P W ARAT+YG +G D GACG+ Sbjct: 29 GAMIGNAVEAPDVAEAPGINDPSKALDPNWYDARATFYGDIHGG--DTQQGACGY 81
>EXPA7_ARATH (Q9LN94) Alpha-expansin 7 precursor (AtEXPA7) (At-EXP7) (AtEx7)| (Ath-ExpAlpha-1.26) Length = 262 Score = 32.3 bits (72), Expect = 0.30 Identities = 14/28 (50%), Positives = 17/28 (60%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGF 293 GPW A AT+YG G + GGACG+ Sbjct: 35 GPWRYAHATFYGDETGG--ETMGGACGY 60
>EXPA5_ARATH (Q38864) Alpha-expansin 5 precursor (AtEXPA5) (At-EXP5) (AtEx5)| (Ath-ExpAlpha-1.4) Length = 255 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/30 (46%), Positives = 19/30 (63%) Frame = +3 Query: 204 YWGPWTPARATWYGQPNGAGPDDNGGACGF 293 + GPW A AT+YG + +G GGACG+ Sbjct: 34 HMGPWINAHATFYGGGDASG--TMGGACGY 61
>EXPA3_ARATH (O80932) Alpha-expansin 3 precursor (AtEXPA3) (At-EXP3) (AtEx3)| (Ath-ExpAlpha-1.9) Length = 262 Score = 32.0 bits (71), Expect = 0.39 Identities = 14/28 (50%), Positives = 18/28 (64%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGF 293 GPW A AT+YG + +G GGACG+ Sbjct: 34 GPWQNAHATFYGGSDASG--TMGGACGY 59
>EXP10_ARATH (Q9LDR9) Alpha-expansin 10 precursor (AtEXPA10) (At-EXP10) (AtEx10)| (Ath-ExpAlpha-1.1) Length = 249 Score = 31.6 bits (70), Expect = 0.51 Identities = 16/53 (30%), Positives = 27/53 (50%) Frame = +3 Query: 174 VDLNVTDATKYWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 V + + + Y G W A AT+YG + +G GGACG+ + + + T+ Sbjct: 12 VGVMASSVSGYGGGWINAHATFYGGGDASG--TMGGACGYGNLYSQGYGTSTA 62
>EXP21_ARATH (Q9FL81) Putative alpha-expansin 21 precursor (AtEXPA21) (At-EXP21)| (AtEx21) (Ath-ExpAlpha-1.20) Length = 256 Score = 30.8 bits (68), Expect = 0.87 Identities = 14/39 (35%), Positives = 22/39 (56%) Frame = +3 Query: 216 WTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 W ARA +YG +G G + GACG+ N++ + T+ Sbjct: 39 WYDARAAYYGDIHGGGTELE-GACGYGDLNKHGYGLATA 76
>ESPL1_MOUSE (P60330) Separin (EC 3.4.22.49) (Separase) (Caspase-like protein| ESPL1) (Extra spindle poles-like 1 protein) Length = 2118 Score = 30.8 bits (68), Expect = 0.87 Identities = 21/58 (36%), Positives = 30/58 (51%), Gaps = 8/58 (13%) Frame = -1 Query: 196 ASVTLRSTSKG-----EASVALRST---APVTARKQRSAASTAREGREPMPRAVVCVW 47 AS T T KG +A VA+ ST + V+ R +R+ +R E P+A +CVW Sbjct: 1416 ASRTRGQTRKGRSLKTDAVVAIESTPGHSSVSGRTRRARKVASRNCEEESPKAPLCVW 1473
>EXP14_ARATH (Q9FMA0) Putative alpha-expansin 14 precursor (AtEXPA14) (At-EXP14)| (AtEx14) (Ath-ExpAlpha-1.5) Length = 255 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/43 (34%), Positives = 23/43 (53%) Frame = +3 Query: 204 YWGPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 Y W ARAT+YG + +G GGACG+ + + + T+ Sbjct: 25 YSSGWVNARATFYGGADASG--TMGGACGYGNLYSQGYGTNTA 65
>EXP13_ARATH (Q9M9P0) Alpha-expansin 13 precursor (AtEXPA13) (At-EXP13) (AtEx13)| (Ath-ExpAlpha-1.22) Length = 266 Score = 30.4 bits (67), Expect = 1.1 Identities = 14/26 (53%), Positives = 16/26 (61%) Frame = +3 Query: 216 WTPARATWYGQPNGAGPDDNGGACGF 293 W PARAT+Y N D GGACG+ Sbjct: 40 WRPARATYYAATNPR--DAVGGACGY 63
>EXP18_ARATH (Q9LQ07) Alpha-expansin 18 precursor (AtEXPA18) (At-EXP18) (AtEx18)| (Ath-ExpAlpha-1.25) Length = 257 Score = 30.4 bits (67), Expect = 1.1 Identities = 15/33 (45%), Positives = 18/33 (54%) Frame = +3 Query: 195 ATKYWGPWTPARATWYGQPNGAGPDDNGGACGF 293 AT PW A AT+YG G+ GGACG+ Sbjct: 24 ATYAGTPWRTASATFYGDDTGSA--TMGGACGY 54
>CCDC8_RAT (P62521) Probable Coiled-coil domain-containing protein 8| Length = 643 Score = 30.0 bits (66), Expect = 1.5 Identities = 25/82 (30%), Positives = 31/82 (37%), Gaps = 3/82 (3%) Frame = -1 Query: 298 CLKPQAPPLSSGPA---PLGWPYQVALAGVQGPQYLVASVTLRSTSKGEASVALRSTAPV 128 C K Q PPL+ G A P Q A A + AS + + A A A Sbjct: 275 CRKEQVPPLAHGTAEEPPEAAENQGAGAAAEHGVEAAASQRPEAAASPRAEAAANPRAEA 334 Query: 127 TARKQRSAASTAREGREPMPRA 62 TA + AA+ R PRA Sbjct: 335 TANPRAEAAANPRAEAAASPRA 356
>EXP22_ARATH (Q9FL80) Putative alpha-expansin 22 precursor (AtEXPA22) (At-EXP22)| (AtEx22) (Ath-ExpAlpha-1.15) Length = 273 Score = 30.0 bits (66), Expect = 1.5 Identities = 20/55 (36%), Positives = 27/55 (49%), Gaps = 1/55 (1%) Frame = +3 Query: 132 GAVDLNATDASPFDVDLNVTDATKYWGP-WTPARATWYGQPNGAGPDDNGGACGF 293 GA+ NA +A + D +K W ARAT+YG +G D GACG+ Sbjct: 23 GAMIGNAVEAPDVAEAPGINDPSKALDTNWYDARATFYGDIHGG--DTQQGACGY 75
>JPH2_RABIT (Q9GKY7) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 694 Score = 30.0 bits (66), Expect = 1.5 Identities = 11/32 (34%), Positives = 18/32 (56%) Frame = +3 Query: 150 ATDASPFDVDLNVTDATKYWGPWTPARATWYG 245 A DA+PF+ D++ T Y G W + + +G Sbjct: 272 ADDAAPFEADIDATTTETYMGEWKNDKRSGFG 303
>AKT5_ARATH (Q9SCX5) Probable potassium channel AKT5| Length = 880 Score = 30.0 bits (66), Expect = 1.5 Identities = 15/32 (46%), Positives = 21/32 (65%), Gaps = 1/32 (3%) Frame = +2 Query: 2 TPTQEPSLRTAHSSDP-HTHHSARHGLPPLPR 94 TP +P ++ HSS+P THH +R +PPL R Sbjct: 740 TPEIKPLMK--HSSEPVMTHHHSREAMPPLAR 769
>PAL2_ORYSA (P53443) Phenylalanine ammonia-lyase (EC 4.3.1.5)| Length = 710 Score = 29.6 bits (65), Expect = 1.9 Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 13/77 (16%) Frame = -1 Query: 325 MDANGYWLVCLKPQAPPLSSGPAP-------------LGWPYQVALAGVQGPQYLVASVT 185 + ANG +C++P+A PL+ G A +G Y+ L ++G +A V Sbjct: 8 VSANGMSGLCVRPRADPLNWGKATEEMTGSQVDEVKRIGAEYRQPLVKIEGASLRIAQVA 67 Query: 184 LRSTSKGEASVALRSTA 134 + + GEA V L +A Sbjct: 68 AVAAA-GEARVELDESA 83
>EXP16_ARATH (Q9M2S9) Alpha-expansin 16 precursor (AtEXPA16) (At-EXP16) (AtEx16)| (Ath-ExpAlpha-1.7) Length = 260 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 G W A AT+YG + +G GGACG+ + + + T+ Sbjct: 32 GSWQTAHATFYGGNDASG--TMGGACGYGNLYSQGYGTNTA 70
>EXPA4_ARATH (O48818) Alpha-expansin 4 precursor (AtEXPA4) (At-EXP4) (AtEx4)| (Ath-ExpAlpha-1.6) Length = 257 Score = 29.3 bits (64), Expect = 2.5 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 G W A AT+YG + +G GGACG+ + + + T+ Sbjct: 29 GAWQNAHATFYGGSDASG--TMGGACGYGNLYSQGYGTNTA 67
>EXPA1_ARATH (Q9C554) Alpha-expansin 1 precursor (AtEXPA1) (At-EXP1) (AtEx1)| (Ath-ExpAlpha-1.2) Length = 250 Score = 28.9 bits (63), Expect = 3.3 Identities = 14/41 (34%), Positives = 22/41 (53%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 G W A AT+YG + +G GGACG+ + + + T+ Sbjct: 25 GGWVNAHATFYGGGDASG--TMGGACGYGNLYSQGYGTNTA 63
>LIN5_CAEEL (P45970) Spindle apparatus protein lin-5 (Abnormal cell lineage| protein 5) Length = 821 Score = 28.9 bits (63), Expect = 3.3 Identities = 18/46 (39%), Positives = 25/46 (54%) Frame = -1 Query: 196 ASVTLRSTSKGEASVALRSTAPVTARKQRSAASTAREGREPMPRAV 59 AS R+ + S+ T TAR+ R+A+STAR R P+ AV Sbjct: 162 ASSGFRTPKRNNYSLTSLQTPTATARRLRTASSTAR--RSPIAEAV 205
>PROP_HUMAN (P27918) Properdin precursor (Factor P)| Length = 469 Score = 28.9 bits (63), Expect = 3.3 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = +3 Query: 207 WGPWTPARATWYGQPN 254 WGPWTP A+ +G P+ Sbjct: 199 WGPWTPCSASCHGGPH 214
>EXPA6_ARATH (Q38865) Alpha-expansin 6 precursor (AtEXPA6) (At-EXP6) (AtEx6)| (Ath-ExpAlpha-1.8) Length = 257 Score = 28.9 bits (63), Expect = 3.3 Identities = 13/28 (46%), Positives = 17/28 (60%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGF 293 G W A AT+YG + +G GGACG+ Sbjct: 29 GGWETAHATFYGGSDASG--TMGGACGY 54
>Y4VI_RHISN (Q53217) Putative short-chain type dehydrogenase/reductase y4vI (EC| 1.-.-.-) Length = 548 Score = 28.9 bits (63), Expect = 3.3 Identities = 19/65 (29%), Positives = 31/65 (47%) Frame = -1 Query: 241 YQVALAGVQGPQYLVASVTLRSTSKGEASVALRSTAPVTARKQRSAASTAREGREPMPRA 62 +Q ALA Y VA T + G A V + S A + +RSA + ++ G + ++ Sbjct: 108 FQRALAINLVGAYSVACETAKLMKPGAAIVNVASLAGLLGNPKRSAYAASKAGLISITKS 167 Query: 61 VVCVW 47 + C W Sbjct: 168 LACRW 172
>YWDJ_BACSU (P39618) Putative purine permease ywdJ| Length = 460 Score = 28.5 bits (62), Expect = 4.3 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = -1 Query: 298 CLKPQAPPLSSGPAPLGWPYQVALAGVQGPQYLVASVTLR 179 CLK P++ PA L W AG+ G + TLR Sbjct: 55 CLKGHRLPINESPAGLWWGVYTIYAGLTGTVFATYGDTLR 94
>JPH2_HUMAN (Q9BR39) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 696 Score = 28.5 bits (62), Expect = 4.3 Identities = 10/32 (31%), Positives = 18/32 (56%) Frame = +3 Query: 150 ATDASPFDVDLNVTDATKYWGPWTPARATWYG 245 A +A+PF+ D++ T Y G W + + +G Sbjct: 273 ADEAAPFEADIDATTTETYMGEWKNDKRSGFG 304
>EXPA2_ARATH (Q38866) Alpha-expansin 2 precursor (AtEXPA2) (At-EXP2) (AtEx2)| (Ath-ExpAlpha-1.12) Length = 255 Score = 28.1 bits (61), Expect = 5.7 Identities = 13/41 (31%), Positives = 21/41 (51%) Frame = +3 Query: 210 GPWTPARATWYGQPNGAGPDDNGGACGFKHTNQYPFASMTS 332 G W AT+YG + +G GGACG+ + + + T+ Sbjct: 30 GGWERGHATFYGGADASG--TMGGACGYGNLHSQGYGLQTA 68
>JPH2_MOUSE (Q9ET78) Junctophilin-2 (Junctophilin type 2) (JP-2)| Length = 696 Score = 28.1 bits (61), Expect = 5.7 Identities = 10/29 (34%), Positives = 16/29 (55%) Frame = +3 Query: 159 ASPFDVDLNVTDATKYWGPWTPARATWYG 245 A+PFD D++ T Y G W + + +G Sbjct: 270 AAPFDADIDATTTETYMGEWKNDKRSGFG 298
>NUPL_RAT (Q4KLH5) Nucleoporin-like protein RIP (HIV-1 Rev-binding protein| homolog) Length = 561 Score = 27.7 bits (60), Expect = 7.4 Identities = 18/56 (32%), Positives = 27/56 (48%), Gaps = 1/56 (1%) Frame = -1 Query: 289 PQAPPLSSGPAPLG-WPYQVALAGVQGPQYLVASVTLRSTSKGEASVALRSTAPVT 125 PQ P SSGPAP G P GP ++ ++ ++G A+ A TA ++ Sbjct: 414 PQTQPASSGPAPFGATPSTNPFVAATGPSAASSTNPFQTNARG-ATAATFGTASMS 468
>RHAB_SALTY (P27030) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)| Length = 489 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 129 TGAVDLNATDASPFD-VDLNVTDATKYWGPWTPARATWYGQPNGAG 263 TG ++ T+A+ V++N D WT A+ +W+G+P+ G Sbjct: 169 TGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPG 214
>RHAB_SALTI (Q8Z2V4) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)| Length = 489 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 129 TGAVDLNATDASPFD-VDLNVTDATKYWGPWTPARATWYGQPNGAG 263 TG ++ T+A+ V++N D WT A+ +W+G+P+ G Sbjct: 169 TGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPG 214
>RHAB_SALPA (Q5PKG3) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)| Length = 489 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 129 TGAVDLNATDASPFD-VDLNVTDATKYWGPWTPARATWYGQPNGAG 263 TG ++ T+A+ V++N D WT A+ +W+G+P+ G Sbjct: 169 TGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPG 214
>RHAB_SALCH (Q57HG9) Rhamnulokinase (EC 2.7.1.5) (Rhamnulose kinase)| Length = 489 Score = 27.7 bits (60), Expect = 7.4 Identities = 14/46 (30%), Positives = 25/46 (54%), Gaps = 1/46 (2%) Frame = +3 Query: 129 TGAVDLNATDASPFD-VDLNVTDATKYWGPWTPARATWYGQPNGAG 263 TG ++ T+A+ V++N D WT A+ +W+G+P+ G Sbjct: 169 TGEMNWEYTNATTTQLVNINTDDWDDTLLAWTGAKKSWFGRPSHPG 214
>FTSK_RHIME (Q92L89) DNA translocase ftsK| Length = 881 Score = 27.7 bits (60), Expect = 7.4 Identities = 15/44 (34%), Positives = 19/44 (43%) Frame = -1 Query: 331 EVMDANGYWLVCLKPQAPPLSSGPAPLGWPYQVALAGVQGPQYL 200 +V+ G W + LS PAP+ WP L GV G L Sbjct: 108 KVLKRLGLWFAGSVLASAALSCVPAPITWPLPNGLGGVFGDMIL 151
>CDAN1_MOUSE (Q8CC12) Codanin-1 (Fragment)| Length = 468 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 3/63 (4%) Frame = -1 Query: 235 VALAGVQGPQYLVASVT--LRSTSKGEASVALRSTAPV-TARKQRSAASTAREGREPMPR 65 V LA + +L A++T +R K S LR+ P TAR +R S A E P+P Sbjct: 207 VGLATEKACSWLSANITALIRREVKAAVSRMLRAQGPEPTARVERRGCSRACEHHAPLPS 266 Query: 64 AVV 56 ++ Sbjct: 267 HLI 269
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 27.7 bits (60), Expect = 7.4 Identities = 21/73 (28%), Positives = 27/73 (36%) Frame = -1 Query: 292 KPQAPPLSSGPAPLGWPYQVALAGVQGPQYLVASVTLRSTSKGEASVALRSTAPVTARKQ 113 K AP PAP P + A + P T +T KG A L+ AP T +K Sbjct: 670 KAAAPNTPKEPAPTT-PKEPAPTTPKEPAPTTPKETAPTTPKGTAPTTLKEPAPTTPKKP 728 Query: 112 RSAASTAREGREP 74 +EP Sbjct: 729 APKELAPTTTKEP 741
>STRAD_MOUSE (Q60924) Retinoic acid-inducible E3 protein (Hematopoietic-specific| protein E3) Length = 215 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 147 HGAPPTTHWSAHHGAPP 163 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 135 HGAPPTTHWSAHHGAPP 151 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 123 HGAPPTTHWSAHHGAPP 139 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 111 HGAPPTTHWSAHHGAPP 127 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 99 HGAPPTTHWSAHHGAPP 115 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 87 HGAPPTTHWSAHHGAPP 103 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 75 HGAPPTTHWSAHHGAPP 91 Score = 27.3 bits (59), Expect = 9.7 Identities = 10/17 (58%), Positives = 11/17 (64%) Frame = +2 Query: 35 HSSDPHTHHSARHGLPP 85 H + P TH SA HG PP Sbjct: 63 HGAPPTTHWSAHHGAPP 79
>GLGB_PHOPR (Q6LHN1) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen| branching enzyme) (BE) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase) Length = 716 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/23 (56%), Positives = 16/23 (69%) Frame = +3 Query: 168 FDVDLNVTDATKYWGPWTPARAT 236 ++V LN TDA KYWG TP + T Sbjct: 662 YEVLLN-TDAEKYWGSGTPIQQT 683
>CTFB_CLOAB (P23673) Butyrate--acetoacetate CoA-transferase subunit B (EC| 2.8.3.9) (Coat B) (Acetoacetyl-CoA:acetate/butyrate:CoA transferase subunit B) Length = 221 Score = 27.3 bits (59), Expect = 9.7 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 5/50 (10%) Frame = -1 Query: 229 LAGVQGPQYLVAS-----VTLRSTSKGEASVALRSTAPVTARKQRSAAST 95 L+G+ G LV + +R T+KG+ + + T P+TA+ Q + T Sbjct: 127 LSGMGGAMDLVNGAKKVIIAMRHTNKGQPKILKKCTLPLTAKSQANLIVT 176
>FMT_CLOPE (Q8XJL3) Methionyl-tRNA formyltransferase (EC 2.1.2.9)| Length = 309 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = -1 Query: 340 LPQEVMDANGYWLVCLKPQAPPLSSGPAPLGW 245 LP+EV+D Y + L P G APL W Sbjct: 91 LPKEVLDIPKYGCINLHASLLPKFRGAAPLNW 122
>YEMA_DROME (P25992) Yemanuclein-alpha| Length = 1002 Score = 27.3 bits (59), Expect = 9.7 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%) Frame = -1 Query: 292 KPQAPPLSSGPAPLGWPYQVALAGVQGP---QYLVASVTLRSTSKGEASVALRSTAPVTA 122 KP+APP S+ P P+G V A Q P YL A RS + A +++ Sbjct: 648 KPKAPPASASPKPVG----VVSAPEQMPPASSYLKAVEDPRSRGNSDTDSATSASSNSLK 703 Query: 121 RK 116 RK Sbjct: 704 RK 705
>CO8B_ONCMY (Q90X85) Complement component C8 beta chain precursor (Complement| component 8 beta subunit) Length = 587 Score = 27.3 bits (59), Expect = 9.7 Identities = 13/40 (32%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Frame = +3 Query: 177 DLNVTDATKYWGPWTPARA---TWYGQPNGAGPDDNGGAC 287 D+ + + WG W+P R T Q N P G AC Sbjct: 537 DIGIDGSWSCWGSWSPCRGRSKTRSRQCNNPAPSSGGIAC 576 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.129 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,802,267 Number of Sequences: 219361 Number of extensions: 543715 Number of successful extensions: 3041 Number of sequences better than 10.0: 54 Number of HSP's better than 10.0 without gapping: 2768 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 3036 length of database: 80,573,946 effective HSP length: 88 effective length of database: 61,270,178 effective search space used: 1470484272 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
