>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                               
Query: 181      cacatgttgagtggacaaacggcggttagtg 211
                ||||||||||||| ||||||||||| |||||
Sbjct: 22837216 cacatgttgagtgaacaaacggcggctagtg 22837186

>dbj|AP003981.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1019_E02
          Length = 121607

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                            
Query: 181   cacatgttgagtggacaaacggcggttagtg 211
             ||||||||||||| ||||||||||| |||||
Sbjct: 30483 cacatgttgagtgaacaaacggcggctagtg 30453

>dbj|AK120160.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013030P03, full
           insert sequence
          Length = 1528

 Score = 46.1 bits (23), Expect = 0.059
 Identities = 29/31 (93%)
 Strand = Plus / Plus

                                          
Query: 181 cacatgttgagtggacaaacggcggttagtg 211
           ||||||||||||| ||||||||||| |||||
Sbjct: 146 cacatgttgagtgaacaaacggcggctagtg 176

>emb|BX640448.1| Bordetella bronchiseptica strain RB50, complete genome; segment 12/16
          Length = 347137

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 236    gcggcgtcgagcagcagcaccagcgt 261
              ||||||||||||||||||||| ||||
Sbjct: 235443 gcggcgtcgagcagcagcacctgcgt 235468

>emb|BX640433.1| Bordetella parapertussis strain 12822, complete genome; segment 11/14
          Length = 349305

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                        
Query: 236    gcggcgtcgagcagcagcaccagcgt 261
              ||||||||||||||||||||| ||||
Sbjct: 173173 gcggcgtcgagcagcagcacctgcgt 173198

>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12
          Length = 349028

 Score = 44.1 bits (22), Expect = 0.23
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 236    gcggcgtcgagcagcagcaccagcgt 261
              ||||||||||||||||||||| ||||
Sbjct: 182119 gcggcgtcgagcagcagcacctgcgt 182094

>gb|AF024666.2| Corynebacterium striatum strain M82B R-plasmid pTP10, complete sequence
          Length = 51409

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 13    accggcaccacagaccacacc 33
             |||||||||||||||||||||
Sbjct: 33157 accggcaccacagaccacacc 33137

>emb|AL583919.1|MLEPRTN3 Mycobacterium leprae strain TN complete genome; segment 3/10
          Length = 312050

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 239    gcgtcgagcagcagcaccagc 259
              |||||||||||||||||||||
Sbjct: 285608 gcgtcgagcagcagcaccagc 285588

>gb|AE017285.1| Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete
              genome
          Length = 3570858

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 240    cgtcgagcagcagcaccagcg 260
              |||||||||||||||||||||
Sbjct: 128986 cgtcgagcagcagcaccagcg 129006

>gb|AC017007.9| Homo sapiens BAC clone RP11-119H12 from 4, complete sequence
          Length = 182805

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 57   ctccagcttcagctgagctcc 77
            |||||||||||||||||||||
Sbjct: 6053 ctccagcttcagctgagctcc 6033

>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 42.1 bits (21), Expect = 0.92
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 241     gtcgagcagcagcaccagcgtcggc 265
               |||||||||||||||||||| ||||
Sbjct: 1568292 gtcgagcagcagcaccagcggcggc 1568316

>ref|NM_188612.1| Oryza sativa (japonica cultivar-group), Ozsa8215 predicted mRNA
          Length = 726

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 256 cagcgtcggccgatcgagga 275
           ||||||||||||||||||||
Sbjct: 201 cagcgtcggccgatcgagga 182

>ref|XM_478758.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 951

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 184 atgttgagtggacaaacggcggttagtg 211
           |||||||||| ||||||||||| |||||
Sbjct: 1   atgttgagtgaacaaacggcggctagtg 28

>gb|BT017891.1| Zea mays clone EL01N0515A03.c mRNA sequence
          Length = 700

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 243 cgagcagcagcaccagcgtc 262
           ||||||||||||||||||||
Sbjct: 86  cgagcagcagcaccagcgtc 67

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     gcagcagcaccagcgtcggc 265
               ||||||||||||||||||||
Sbjct: 5827874 gcagcagcaccagcgtcggc 5827855



 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 241    gtcgagcagcagcaccagcg 260
              ||||||||||||||||||||
Sbjct: 403250 gtcgagcagcagcaccagcg 403231

>gb|AC092187.2| Drosophila melanogaster clone BACR23N06, complete sequence
          Length = 164920

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    gctcctccagcttcagctga 72
             ||||||||||||||||||||
Sbjct: 53370 gctcctccagcttcagctga 53389

>gb|AC137608.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0009C07, complete sequence
          Length = 148731

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 234   ccgcggcgtcgagcagcagc 253
             ||||||||||||||||||||
Sbjct: 67308 ccgcggcgtcgagcagcagc 67289

>emb|BX059260.1|CNS09HW0 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAC4AA11 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 997

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 615 gcagcagcaccagcgtcggc 596

>emb|BX030658.1|CNS08VTI Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA45DC03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 765

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 603 gcagcagcaccagcgtcggc 584

>emb|BX029342.1|CNS08USY Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA43DD07 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 961

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 635 gcagcagcaccagcgtcggc 616

>emb|BX024651.1|CNS08R6N Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA37CH01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 898

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 575 gcagcagcaccagcgtcggc 556

>emb|BX024057.1|CNS08QQ5 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA36CH03 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 745

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 604 gcagcagcaccagcgtcggc 585

>emb|BX019846.1|CNS08NH6 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA3BB01 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 945

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 600 gcagcagcaccagcgtcggc 581

>emb|BX011165.1|CNS08GS1 Single read from an extremity of a full-length cDNA clone made from
           Anopheles gambiae total adult females. 5-PRIME end of
           clone FK0AAA17DD04 of strain 6-9 of Anopheles gambiae
           (African malaria mosquito)
          Length = 939

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 627 gcagcagcaccagcgtcggc 608

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 235     cgcggcgtcgagcagcagcaccagcgtc 262
               |||||||||||||||| || ||||||||
Sbjct: 5402893 cgcggcgtcgagcagcggcgccagcgtc 5402866

>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome
          Length = 4712337

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 245     agcagcagcaccagcgtcgg 264
               ||||||||||||||||||||
Sbjct: 3557374 agcagcagcaccagcgtcgg 3557393

>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 236     gcggcgtcgagcagcagcaccagc 259
               |||||| |||||||||||||||||
Sbjct: 2767350 gcggcgacgagcagcagcaccagc 2767327

>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 234      ccgcggcgtcgagcagcagc 253
                ||||||||||||||||||||
Sbjct: 28913015 ccgcggcgtcgagcagcagc 28912996

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 256     cagcgtcggccgatcgagga 275
               ||||||||||||||||||||
Sbjct: 7238921 cagcgtcggccgatcgagga 7238902

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0485D09
          Length = 150594

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 256    cagcgtcggccgatcgagga 275
              ||||||||||||||||||||
Sbjct: 133569 cagcgtcggccgatcgagga 133550

>dbj|AP001550.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431F01
          Length = 143209

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 256   cagcgtcggccgatcgagga 275
             ||||||||||||||||||||
Sbjct: 40351 cagcgtcggccgatcgagga 40332

>ref|XM_319655.2| Anopheles gambiae str. PEST ENSANGP00000013885
           (ENSANGG00000011396), mRNA
          Length = 1664

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 246 gcagcagcaccagcgtcggc 265
           ||||||||||||||||||||
Sbjct: 634 gcagcagcaccagcgtcggc 615

>gb|AC007765.1|AC007765 Drosophila melanogaster, chromosome 2L, region 23C1-23C5, P1 clones
             DS02190 and DS00906, complete sequence
          Length = 163403

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 53    gctcctccagcttcagctga 72
             ||||||||||||||||||||
Sbjct: 31554 gctcctccagcttcagctga 31573

>gb|AE003581.4| Drosophila melanogaster chromosome 2L, section 10 of 83 of the complete
              sequence
          Length = 314957

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 53     gctcctccagcttcagctga 72
              ||||||||||||||||||||
Sbjct: 169146 gctcctccagcttcagctga 169127

>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome
          Length = 4751080

 Score = 40.1 bits (20), Expect = 3.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 236     gcggcgtcgagcagcagcac 255
               ||||||||||||||||||||
Sbjct: 2985431 gcggcgtcgagcagcagcac 2985450


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,923,211
Number of Sequences: 3902068
Number of extensions: 1923211
Number of successful extensions: 41087
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 40571
Number of HSP's gapped (non-prelim): 516
length of query: 279
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 257
effective length of database: 17,147,199,772
effective search space: 4406830341404
effective search space used: 4406830341404
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)