ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81d06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hy... 36 0.032
2EVC_MOUSE (P57680) Ellis-van Creveld syndrome protein homolog 30 1.8
3PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glut... 30 2.3
4XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hy... 29 3.0
5XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hy... 29 3.0
6XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hy... 28 5.2
7ITIH4_HUMAN (Q14624) Inter-alpha-trypsin inhibitor heavy chain H... 28 5.2
8XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte ... 28 6.7
9XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hy... 28 8.8
10XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase p... 28 8.8

>XTH25_ARATH (Q38907) Probable xyloglucan endotransglucosylase/hydrolase protein|
           25 precursor (EC 2.4.1.207) (At-XTH25) (XTH-25)
          Length = 284

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 13/15 (86%), Positives = 14/15 (93%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRGK 178
           FD EFD+TWGDGRGK
Sbjct: 30  FDTEFDITWGDGRGK 44



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>EVC_MOUSE (P57680) Ellis-van Creveld syndrome protein homolog|
          Length = 1005

 Score = 30.0 bits (66), Expect = 1.8
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 4/59 (6%)
 Frame = -3

Query: 165 SPQVTSNSLSKLAAARAQEASRIESTDAPMRAMRCVLPKVGS----LGLRMLDGNLCLC 1
           SP  +  SLS+        +S + ST +  R ++C   +VGS    L    +D +LC+C
Sbjct: 156 SPASSLGSLSQAGKEDGSSSSSMRSTYSDDRILQCAFLRVGSFPEILACESVDIDLCVC 214



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>PROB_SILPO (Q5LRY5) Glutamate 5-kinase (EC 2.7.2.11) (Gamma-glutamyl kinase)|
           (GK)
          Length = 368

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 15/32 (46%), Positives = 17/32 (53%)
 Frame = +1

Query: 79  GGVGAFDPARLLRPGGGELRQGVRRYLG*RAR 174
           G  G  DP  +L P G  L QG+ RY G  AR
Sbjct: 307 GDFGRGDPVAILGPDGRRLGQGLCRYTGDEAR 338



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>XTH16_ARATH (Q8LG58) Probable xyloglucan endotransglucosylase/hydrolase protein|
           16 precursor (EC 2.4.1.207) (At-XTH16) (XTH-16)
          Length = 291

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 10/15 (66%), Positives = 14/15 (93%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRGK 178
           F++EFD+TWG+ RGK
Sbjct: 27  FNEEFDLTWGEHRGK 41



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>XTH21_ARATH (Q9ZV40) Probable xyloglucan endotransglucosylase/hydrolase protein|
           21 precursor (EC 2.4.1.207) (At-XTH21) (XTH-21)
          Length = 305

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 9/14 (64%), Positives = 13/14 (92%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRG 175
           F+++ D+TWGDGRG
Sbjct: 28  FNQDIDITWGDGRG 41



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>XTH15_ARATH (Q38911) Probable xyloglucan endotransglucosylase/hydrolase protein|
           15 precursor (EC 2.4.1.207) (At-XTH15) (XTH-15)
          Length = 289

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 11/15 (73%), Positives = 12/15 (80%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRGK 178
           F  EFD+TWGD RGK
Sbjct: 28  FFDEFDLTWGDHRGK 42



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>ITIH4_HUMAN (Q14624) Inter-alpha-trypsin inhibitor heavy chain H4 precursor|
           (ITI heavy chain H4) (Inter-alpha-inhibitor heavy chain
           4) (Inter-alpha-trypsin inhibitor family heavy
           chain-related protein) (IHRP) (Plasma kallikrein
           sensitive glycoprotein 120
          Length = 930

 Score = 28.5 bits (62), Expect = 5.2
 Identities = 15/48 (31%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
 Frame = -3

Query: 177 LPRPSPQVTSN---SLSKLAAARAQEASRIESTDAPMRAMRCVLPKVG 43
           LP  +P  TSN   ++S++   + +E +    T AP++A   +LP  G
Sbjct: 693 LPASAPPATSNPDPAVSRVMNMKIEETTMTTQTPAPIQAPSAILPLPG 740



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>XE7_HUMAN (Q02040) B-lymphocyte antigen precursor (B-lymphocyte surface|
           antigen) (721P) (Protein XE7)
          Length = 695

 Score = 28.1 bits (61), Expect = 6.7
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
 Frame = -2

Query: 133 ARRRQGARGEQDRKHRRPHASHALR--APKSRLTRSEN 26
           ARR       + RK RRPH  HA +  +P+ R T  ++
Sbjct: 606 ARRASSREDGRPRKERRPHKKHAYKDDSPRRRSTSPDH 643



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>XTH23_ARATH (Q38910) Probable xyloglucan endotransglucosylase/hydrolase protein|
           23 precursor (EC 2.4.1.207) (At-XTH23) (XTH-23)
          Length = 286

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRGK 178
           F ++ ++TWGDGRG+
Sbjct: 26  FQRDVEITWGDGRGQ 40



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>XTH22_ARATH (Q38857) Xyloglucan endotransglucosylase/hydrolase protein 22|
           precursor (EC 2.4.1.207) (At-XTH22) (XTH-22) (Touch
           protein 4)
          Length = 284

 Score = 27.7 bits (60), Expect = 8.8
 Identities = 8/15 (53%), Positives = 13/15 (86%)
 Frame = +2

Query: 134 FDKEFDVTWGDGRGK 178
           F ++ ++TWGDGRG+
Sbjct: 23  FQRDVEITWGDGRGQ 37


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,608,096
Number of Sequences: 219361
Number of extensions: 408453
Number of successful extensions: 1924
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 80,573,946
effective HSP length: 35
effective length of database: 72,896,311
effective search space used: 1749511464
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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