ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81d06
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransgly... 317 6e-84
2emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein 86 4e-14
3ref|XM_479512.1| Oryza sativa (japonica cultivar-group), mRNA 40 2.2
4ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group... 40 2.2
5ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group... 40 2.2
6gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chrom... 40 2.2
7emb|X66125.1|OSPER O.sativa mRNA for peroxidase 40 2.2
8gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 40 2.2
9gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR syntheta... 40 2.2
10dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
11dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic D... 40 2.2
12dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
13dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
14dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.2
15tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-gr... 40 2.2
16gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, c... 40 2.2
17emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on ch... 40 2.2
18gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosom... 40 2.2
19ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDN... 38 8.8
20ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418... 38 8.8
21ref|XM_463866.1| Oryza sativa (japonica cultivar-group), mRNA 38 8.8
22gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete se... 38 8.8
23gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-r... 38 8.8
24gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 8.8
25gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chrom... 38 8.8
26ref|XM_422713.1| PREDICTED: Gallus gallus similar to RIKEN cDNA ... 38 8.8
27gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromo... 38 8.8
28gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, comp... 38 8.8
29gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromo... 38 8.8
30gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome... 38 8.8
31gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome... 38 8.8
32gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, comple... 38 8.8
33gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81,... 38 8.8
34gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromo... 38 8.8
35gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map... 38 8.8
36gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds 38 8.8
37emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete ch... 38 8.8
38gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A... 38 8.8
39emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chr... 38 8.8
40emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chro... 38 8.8
41emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on ch... 38 8.8
42emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chr... 38 8.8
43emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on ch... 38 8.8
44gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 m... 38 8.8
45ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domai... 38 8.8
46emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome... 38 8.8
47emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 8.8
48gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, ... 38 8.8
49emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chro... 38 8.8
50emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chro... 38 8.8
51emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chr... 38 8.8
52gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, co... 38 8.8
53ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 8... 38 8.8
54ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LO... 38 8.8
55ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 8.8
56ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repe... 38 8.8
57ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 2... 38 8.8
58gb|CP000249.1| Frankia sp. CcI3, complete genome 38 8.8
59gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, comp... 38 8.8
60dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
61dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
62dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
63gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete... 38 8.8
64dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
65dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
66dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic D... 38 8.8
67emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chr... 38 8.8
68dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, ... 38 8.8
69dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, ... 38 8.8
70dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, ... 38 8.8
71emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chr... 38 8.8
72emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004 38 8.8
73gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromat... 38 8.8
74dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 38 8.8
75gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome... 38 8.8
76gb|L27989.1|MSGRPOB Mycobacterium tuberculosis RNA polymerase be... 38 8.8
77dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 8.8
78dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clo... 38 8.8
79dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP... 38 8.8
80emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chro... 38 8.8 
>emb|X93174.1|HVXETXEA H.vulgare mRNA for xyloglucan endotransglycosylase-like protein
           (XEA)
          Length = 1174

 Score =  317 bits (160), Expect = 6e-84
 Identities = 160/160 (100%)
 Strand = Plus / Plus

                                                                       
Query: 20  tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 79
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1   tccagcattctcagaccgagtgagcctacttttgggagcacgcaacgcatggctcgcatg 60

                                                                       
Query: 80  ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 139
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61  ggggcgtcggtgctttcgatcctgctcgcctcttgcgccctggcggcggcgagcttcgac 120

                                                   
Query: 140 aaggagttcgacgttacctggggtgacgggcgcggcaaga 179
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 aaggagttcgacgttacctggggtgacgggcgcggcaaga 160
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>emb|AJ295943.1|FPR295943 Festuca pratensis mRNA for Xet1 protein
          Length = 1187

 Score = 85.7 bits (43), Expect = 4e-14
 Identities = 90/105 (85%), Gaps = 3/105 (2%)
 Strand = Plus / Plus

                                                                       
Query: 67  catggctcgcatgggggcgtcggtgctttcgatcctgctcgcctcttgcgccct---ggc 123
           |||||||||||||| || |||||||||  |||||||||| || ||||| ||| |   |||
Sbjct: 123 catggctcgcatggcggtgtcggtgctggcgatcctgctggcgtcttgtgccgttgcggc 182

                                                        
Query: 124 ggcggcgagcttcgacaaggagttcgacgttacctggggtgacgg 168
           |||||||||||||||||||||||||||| | || ||||| |||||
Sbjct: 183 ggcggcgagcttcgacaaggagttcgacatcacgtggggcgacgg 227
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>ref|XM_479512.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1287

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
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>ref|XM_507412.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1304

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 232 ggctcgcatgggggcgtcgctgct 255
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>ref|XM_506566.2| PREDICTED Oryza sativa (japonica cultivar-group), OJ1167_G06.113
           mRNA
          Length = 1291

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 234 ggctcgcatgggggcgtcgctgct 257
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>gb|AE009201.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 227
            of 256 of the complete sequence
          Length = 11399

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 126  cggcgagcttcgacaaggagttcg 149
            ||||||||||||||||||| ||||
Sbjct: 4271 cggcgagcttcgacaaggatttcg 4294
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>emb|X66125.1|OSPER O.sativa mRNA for peroxidase
          Length = 1287

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 183 ggctcgcatgggggcgtcgctgct 206
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 126     cggcgagcttcgacaaggagttcg 149
               ||||||||||||||||||| ||||
Sbjct: 2519732 cggcgagcttcgacaaggatttcg 2519755
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>gb|AF232237.1|AF232237 Agrobacterium tumefaciens SAICAR synthetase (purC) gene, partial
           cds; and TetR family bacterial regulatory protein
           (ameR), membrane fusion protein (ameA), multidrug efflux
           transporter RND family protein (ameB), and outer
           membrane protein (ameC) genes, complete cds
          Length = 7277

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 126 cggcgagcttcgacaaggagttcg 149
           ||||||||||||||||||| ||||
Sbjct: 119 cggcgagcttcgacaaggatttcg 142
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 70       ggctcgcatgggggcgtcggtgct 93
                ||||||||||||||||||| ||||
Sbjct: 28620405 ggctcgcatgggggcgtcgctgct 28620428
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>dbj|AP003817.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1167_G06
          Length = 112386

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 70    ggctcgcatgggggcgtcggtgct 93
             ||||||||||||||||||| ||||
Sbjct: 86363 ggctcgcatgggggcgtcgctgct 86386
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>dbj|AK104710.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-F01, full
           insert sequence
          Length = 1287

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 230 ggctcgcatgggggcgtcgctgct 253
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>dbj|AK099382.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033069K12, full
           insert sequence
          Length = 1290

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 233 ggctcgcatgggggcgtcgctgct 256
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>dbj|AK073202.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033023C17, full
           insert sequence
          Length = 1303

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 231 ggctcgcatgggggcgtcgctgct 254
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>tpe|BN000640.1| TPA: TPA_inf: Oryza sativa (japonica cultivar-group) prx111 gene
           for class III peroxidase 111 precursor, exons 1-4
          Length = 1250

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 162 ggctcgcatgggggcgtcgctgct 185
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>gb|AF014467.1|AF014467 Oryza sativa peroxidase (POX22.3) mRNA, complete cds
          Length = 1306

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 70  ggctcgcatgggggcgtcggtgct 93
           ||||||||||||||||||| ||||
Sbjct: 205 ggctcgcatgggggcgtcgctgct 228
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>emb|CT009699.13| Mouse DNA sequence from clone RP23-119C14 on chromosome 9, complete
             sequence
          Length = 192913

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ccatccagcattctcagacc 36
             ||||||||||||||||||||
Sbjct: 68495 ccatccagcattctcagacc 68514
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>gb|AC159884.2| Mus musculus BAC clone RP24-416O24 from chromosome 9, complete sequence
          Length = 219361

 Score = 40.1 bits (20), Expect = 2.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 17    ccatccagcattctcagacc 36
             ||||||||||||||||||||
Sbjct: 56171 ccatccagcattctcagacc 56190
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>ref|XM_528809.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA 4921515A04
            (LOC473438), mRNA
          Length = 2931

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   tctcagaccgagtgagcct 46
            |||||||||||||||||||
Sbjct: 1002 tctcagaccgagtgagcct 1020
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>ref|XM_528789.1| PREDICTED: Pan troglodytes LOC473418 (LOC473418), mRNA
          Length = 2202

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 492 tctcagaccgagtgagcct 510
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>ref|XM_463866.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1215

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 114 gcgccctggcggcggcgag 132
           |||||||||||||||||||
Sbjct: 360 gcgccctggcggcggcgag 378
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>gb|AY146588.1| Triticum monococcum BAC clone 453N11, complete sequence
          Length = 285444

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 112   ttgcgccctggcggcggcg 130
             |||||||||||||||||||
Sbjct: 68806 ttgcgccctggcggcggcg 68824
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>gb|AF401203.1| Homo sapiens chAB4 multisequence family and NF1-related multisequence
             family regions
          Length = 86723

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 83115 tctcagaccgagtgagcct 83133
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 160    gggtgacgggcgcggcaag 178
              |||||||||||||||||||
Sbjct: 765649 gggtgacgggcgcggcaag 765631
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>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete
             sequence
          Length = 139973

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 32761 tctcagaccgagtgagcct 32779
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>ref|XM_422713.1| PREDICTED: Gallus gallus similar to RIKEN cDNA C630015F21 gene
           (LOC424902), mRNA
          Length = 2086

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 8   cacaagtttccatccagca 26
           |||||||||||||||||||
Sbjct: 332 cacaagtttccatccagca 350
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>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete
             sequence
          Length = 211457

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 93643 tctcagaccgagtgagcct 93625
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>gb|AC147570.3| Homo sapiens BAC clone RP11-1176F21 from UL, complete sequence
          Length = 191237

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 20294 tctcagaccgagtgagcct 20276
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>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete
              sequence
          Length = 179528

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 110300 tctcagaccgagtgagcct 110318
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>gb|AC183918.1| Homo sapiens BAC clone RP11-170N9 from chromosome unknown, complete
             sequence
          Length = 151064

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 90195 tctcagaccgagtgagcct 90213
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>gb|AC129226.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone
             OSJNBb0024E08, complete sequence
          Length = 131946

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 20    tccagcattctcagaccga 38
             |||||||||||||||||||
Sbjct: 98131 tccagcattctcagaccga 98149
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>gb|CP000117.1| Anabaena variabilis ATCC 29413 chromosome, complete sequence
          Length = 6365727

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 24      gcattctcagaccgagtga 42
               |||||||||||||||||||
Sbjct: 4051644 gcattctcagaccgagtga 4051662
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>gb|BC036580.1| Homo sapiens chromosome 21 open reading frame 81, mRNA (cDNA clone
           IMAGE:4793793), with apparent retained intron
          Length = 2574

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
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>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
              sequence
          Length = 192494

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 191209 tctcagaccgagtgagcct 191191
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>gb|AC113265.25| Mus musculus strain C57BL/6J clone rp23-46k8 map 17, complete sequence
          Length = 143758

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ccatccagcattctcagac 35
             |||||||||||||||||||
Sbjct: 84278 ccatccagcattctcagac 84296
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>gb|BC063278.1| Homo sapiens cDNA clone IMAGE:4798734, partial cds
          Length = 2567

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 304 tctcagaccgagtgagcct 286
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>emb|AL591784.1|SME591784 Sinorhizobium meliloti 1021 complete chromosome; segment 3/12
          Length = 300000

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 89    gtgctttcgatcctgctcg 107
             |||||||||||||||||||
Sbjct: 41157 gtgctttcgatcctgctcg 41175
to top
>gb|BC022023.1| Homo sapiens similar to ankyrin repeat domain 20A, mRNA (cDNA
          clone MGC:26718 IMAGE:4824658), complete cds
          Length = 2088

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 tctcagaccgagtgagcct 46
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32
to top
>emb|CR769776.8| Human DNA sequence from clone RP11-793G16 on chromosome 9 Contains three
              novel pseudogenes, the gene for a novel protein similar to
              ankyrin repeat domain 20A (ANKRD20A), the gene for a  novel
              protein similar to Ankyrin repeat domain protein 18A
              (LOC441424), a pseudogene similar to part of cytochrome
              P450 family protein, a novel zinc finger pseudogene and a
              CpG island, complete sequence
          Length = 161157

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 107687 tctcagaccgagtgagcct 107705
to top
>emb|CR848007.6| Human DNA sequence from clone RP11-115C9 on chromosome 9 Contains a
              calponin 2 (CNN2) pseudogene, a novel zinc finger
              pseudogene, a pseudogene similar to part of cytochrome
              P450, subfamily IVF, a chromosome 2 open reading frame 14
              (C2orf14) pseudogene, a pseudogene similar to part of
              sorting nexin associated golgi protein 1 (SNAG1), a
              melanoma antigen (LOC51152) pseudogene, four novel
              pseudogenes and an ankyrin repeat domain 20A (ANKRD20A)
              pseudogene, complete sequence
          Length = 149891

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 122112 tctcagaccgagtgagcct 122130
to top
>emb|AL773545.13| Human DNA sequence from clone RP11-216M21 on chromosome 9 Contains three
              novel pseudogenes, a pseudogene similar to part of meprin
              A, alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
              similar to part of G protein-coupled receptor 116 (GPR116),
              two novel genes, the 5' end of a novel gene similar to
              ankyrin repeat domain 20A (ANKRD20A) and three CpG islands,
              complete sequence
          Length = 165886

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 153912 tctcagaccgagtgagcct 153894
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>emb|BX649567.3| Human DNA sequence from clone RP11-195B21 on chromosome 9 Contains a
             novel pseudogene, the gene for a novel protein similar to
             ankyrin repeat domain 20A (ANKRD20A), a novel gene and a
             CpG island, complete sequence
          Length = 99502

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 38140 tctcagaccgagtgagcct 38122
to top
>emb|AL513478.10| Human DNA sequence from clone RP11-327I22 on chromosome 9 Contains a
              pseudogene similar to part of sorting nexin associated
              golgi protein 1 (SNAG1), the ANKRD20A gene for ankyrin
              repeat domain 20A, five novel genes, a pseudogene similar
              to part of eprin A, alpha (PABA peptide hydrolase) (MEP1A)
              and a CpG island, complete sequence
          Length = 180498

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 100469 tctcagaccgagtgagcct 100487
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>gb|AC093450.20| Mus musculus strain C57BL/6J clone rp23-297j19 map 17, complete
             sequence
          Length = 202803

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 17    ccatccagcattctcagac 35
             |||||||||||||||||||
Sbjct: 62451 ccatccagcattctcagac 62469
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>ref|NM_001029999.1| Homo sapiens similar to ankyrin repeat domain 20A (MGC26718),
          mRNA
          Length = 2088

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 tctcagaccgagtgagcct 46
          |||||||||||||||||||
Sbjct: 50 tctcagaccgagtgagcct 32
to top
>emb|BX842574.1| Mycobacterium tuberculosis H37Rv complete genome; segment 3/13
          Length = 349564

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 160   gggtgacgggcgcggcaag 178
             |||||||||||||||||||
Sbjct: 79403 gggtgacgggcgcggcaag 79385
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>emb|BX248336.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment
             3/14
          Length = 320050

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 160   gggtgacgggcgcggcaag 178
             |||||||||||||||||||
Sbjct: 98445 gggtgacgggcgcggcaag 98427
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>gb|BC043199.1| Homo sapiens cDNA clone MGC:44241 IMAGE:5289033, complete cds
          Length = 2572

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
to top
>emb|BX649563.5| Human DNA sequence from clone RP11-213O5 on chromosome 9 Contains a
            pseudogene similar to part of a novel protein
            (DKFZp434A171), a pseudogene similar to part of meprin A,
            alpha (PABA peptide hydrolase) (MEP1A), a pseudogene
            similar to part of a novel transmembrane receptor protein
            and two novel pseudogenes, complete sequence
          Length = 189495

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 28   tctcagaccgagtgagcct 46
            |||||||||||||||||||
Sbjct: 6087 tctcagaccgagtgagcct 6105
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>emb|CR392039.8| Human DNA sequence from clone bP-2171C21 on chromosome 21, complete
             sequence
          Length = 158069

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 56786 tctcagaccgagtgagcct 56804
to top
>emb|CR381535.11| Human DNA sequence from clone bP-2154M18 on chromosome 21, complete
             sequence
          Length = 152296

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 44098 tctcagaccgagtgagcct 44080
to top
>gb|AF426257.1| Homo sapiens C21orf81 protein (C21orf81) mRNA, complete cds
          Length = 1102

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
to top
>ref|NM_153750.1| Homo sapiens chromosome 21 open reading frame 81 (C21orf81), mRNA
          Length = 1102

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 309 tctcagaccgagtgagcct 291
to top
>ref|XM_932240.1| PREDICTED: Homo sapiens hypothetical protein LOC644558 (LOC644558),
           mRNA
          Length = 831

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 28  tctcagaccgagtgagcct 46
           |||||||||||||||||||
Sbjct: 762 tctcagaccgagtgagcct 744
to top
>ref|XM_928873.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC392331),
          mRNA
          Length = 4125

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 tctcagaccgagtgagcct 46
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
to top
>ref|XM_938860.1| PREDICTED: Homo sapiens similar to ankyrin repeat domain 20
          family, member A2, transcript variant 1 (LOC648303),
          mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 tctcagaccgagtgagcct 46
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
to top
>ref|XM_371535.3| PREDICTED: Homo sapiens ankyrin repeat domain 20B, transcript
          variant 1 (ANKRD20B), mRNA
          Length = 4122

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                             
Query: 28 tctcagaccgagtgagcct 46
          |||||||||||||||||||
Sbjct: 39 tctcagaccgagtgagcct 21
to top
>gb|CP000249.1| Frankia sp. CcI3, complete genome
          Length = 5433628

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 114     gcgccctggcggcggcgagcttc 136
               ||||||| |||||||||||||||
Sbjct: 4499622 gcgccctcgcggcggcgagcttc 4499644
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>gb|AC020916.8| Homo sapiens chromosome 19 clone CTD-3252C9, complete sequence
          Length = 214530

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 28/31 (90%)
 Strand = Plus / Plus

                                            
Query: 4     caaacacaagtttccatccagcattctcaga 34
             ||||| |||||| || |||||||||||||||
Sbjct: 47212 caaacccaagttcccctccagcattctcaga 47242
to top
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 20       tccagcattctcagaccga 38
                |||||||||||||||||||
Sbjct: 26074564 tccagcattctcagaccga 26074582
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                   
Query: 115      cgccctggcggcggcgagc 133
                |||||||||||||||||||
Sbjct: 22906345 cgccctggcggcggcgagc 22906327
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2,
              complete sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 114    gcgccctggcggcggcgag 132
              |||||||||||||||||||
Sbjct: 795921 gcgccctggcggcggcgag 795903
to top
>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence
          Length = 127075

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 30119 tctcagaccgagtgagcct 30137
to top
>dbj|AP003617.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0502H06
          Length = 165630

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 115   cgccctggcggcggcgagc 133
             |||||||||||||||||||
Sbjct: 81167 cgccctggcggcggcgagc 81149
to top
>dbj|AP004121.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
            clone:OJ1442_E05
          Length = 162407

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 114  gcgccctggcggcggcgag 132
            |||||||||||||||||||
Sbjct: 5129 gcgccctggcggcggcgag 5111
to top
>dbj|AP004867.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0036E06
          Length = 137926

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 114   gcgccctggcggcggcgag 132
             |||||||||||||||||||
Sbjct: 74052 gcgccctggcggcggcgag 74034
to top
>emb|AL355000.11| Human DNA sequence from clone RP11-78N10 on chromosome 22, complete
              sequence
          Length = 219376

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 160431 tctcagaccgagtgagcct 160413
to top
>dbj|BS000149.1| Pan troglodytes chromosome 22 clone:PTB-407O15, map 22, complete
             sequences
          Length = 50768

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 16871 tctcagaccgagtgagcct 16853
to top
>dbj|BS000006.1| Pan troglodytes chromosome 22 clone:PTB-274F15, map 22, complete
             sequences
          Length = 118294

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 40213 tctcagaccgagtgagcct 40195
to top
>dbj|BS000004.1| Pan troglodytes chromosome 22 clone:PTB-080D12, map 22, complete
             sequences
          Length = 86840

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 54056 tctcagaccgagtgagcct 54074
to top
>emb|AL354822.8| Human DNA sequence from clone RP11-474C22 on chromosome 22, complete
             sequence
          Length = 161147

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 58349 tctcagaccgagtgagcct 58331
to top
>emb|AL163204.2|HS21C004 Homo sapiens chromosome 21 segment HS21C004
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 338686 tctcagaccgagtgagcct 338704
to top
>gb|AC004527.2|AC004527 Homo sapiens chromosome 21, Neurofibromatosis 1 (NF1) related locus,
             complete sequence
          Length = 131971

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 76059 tctcagaccgagtgagcct 76077
to top
>dbj|AP001660.1| Homo sapiens genomic DNA, chromosome 21q, section 4/105
          Length = 340000

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 83628 tctcagaccgagtgagcct 83610
to top
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 20       tccagcattctcagaccga 38
                |||||||||||||||||||
Sbjct: 26393260 tccagcattctcagaccga 26393278
to top
>gb|L27989.1|MSGRPOB Mycobacterium tuberculosis RNA polymerase beta-subunit (rpoB)  gene,
            complete cds and RNA polymerase beta'-subunit rpoC gene, 
            partial cds
          Length = 5084

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 160  gggtgacgggcgcggcaag 178
            |||||||||||||||||||
Sbjct: 4947 gggtgacgggcgcggcaag 4929
to top
>dbj|AP001347.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:R73I15, q-centromere
             region, complete sequence
          Length = 134926

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 28891 tctcagaccgagtgagcct 28873
to top
>dbj|AP001634.1| Homo sapiens genomic DNA, chromosome 21q11.1 clone:B585O4, D21S290-LL56
             region, complete sequence
          Length = 71829

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 28    tctcagaccgagtgagcct 46
             |||||||||||||||||||
Sbjct: 15920 tctcagaccgagtgagcct 15938
to top
>dbj|AP001004.5| Homo sapiens genomic DNA, chromosome 18 clone:RP11-681B3, complete
              sequence
          Length = 182424

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 116836 tctcagaccgagtgagcct 116818
to top
>emb|AL355973.21| Human DNA sequence from clone RP4-660N4 on chromosome 1, complete
              sequence
          Length = 110898

 Score = 38.2 bits (19), Expect = 8.8
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 28     tctcagaccgagtgagcct 46
              |||||||||||||||||||
Sbjct: 100273 tctcagaccgagtgagcct 100291


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,217,178
Number of Sequences: 3902068
Number of extensions: 1217178
Number of successful extensions: 73703
Number of sequences better than 10.0: 80
Number of HSP's better than 10.0 without gapping: 80
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 73026
Number of HSP's gapped (non-prelim): 676
length of query: 179
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 157
effective length of database: 17,147,199,772
effective search space: 2692110364204
effective search space used: 2692110364204
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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