ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81d03
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|AJ495772.1|HVU495772 Hordeum vulgare putative gene for hepar... 248 5e-63
2dbj|AK098886.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 2e-22
3dbj|AK060767.1| Oryza sativa (japonica cultivar-group) cDNA clon... 113 2e-22
4dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 74 2e-10
5gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 74 2e-10
6emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa... 74 2e-10
7emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa... 74 2e-10
8dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone... 46 0.038
9gb|BT013740.1| Lycopersicon esculentum clone 132601F, mRNA sequence 42 0.59
10gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell ... 42 0.59
11gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell ... 42 0.59
12gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 ... 42 0.59
13ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 ... 40 2.3
14gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome ... 40 2.3
15gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, comple... 40 2.3
16gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, comp... 40 2.3
17gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map... 40 2.3
18gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, co... 40 2.3
19gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequ... 40 2.3
20gb|AC126803.4| Mus musculus BAC clone RP24-549B23 from 3, comple... 40 2.3
21gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold 40 2.3
22ref|XM_385621.1| Gibberella zeae PH-1 chromosome 3 predicted pro... 38 9.2
23emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, comple... 38 9.2
24gb|U50067.2| Caenorhabditis elegans cosmid C18F3, complete sequence 38 9.2
25emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chro... 38 9.2
26emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin... 38 9.2
27gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, compl... 38 9.2
28gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, comp... 38 9.2
29ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain struc... 38 9.2
30gb|DQ026625.1| Tetracymbaliella cymbalifera voucher Frahm 1-23 (... 38 9.2
31gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13... 38 9.2
32gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14... 38 9.2
33gb|AE014133.1| Streptococcus mutans UA159, complete genome 38 9.2
34emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB1... 38 9.2
35emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chr... 38 9.2 
>emb|AJ495772.1|HVU495772 Hordeum vulgare putative gene for heparanase
          Length = 2215

 Score =  248 bits (125), Expect = 5e-63
 Identities = 134/137 (97%)
 Strand = Plus / Plus

                                                                        
Query: 51   ggtaatgaattgagtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaa 110
            ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 910  ggtaatgaattgagtggaagtggaatcggtgcaagcgtgggggccgaacaatacggaaaa 969

                                                                        
Query: 111  gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattg 170
            ||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct: 970  gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaaccctagcaaaccattg 1029

                             
Query: 171  gtgctagccccaggagg 187
            |||||||||||||||||
Sbjct: 1030 gtgctagccccaggagg 1046



 Score =  111 bits (56), Expect = 8e-22
 Identities = 56/56 (100%)
 Strand = Plus / Plus

                                                                   
Query: 1   ttatggaatatactgtttcaatgaattatcctattgattcatgggaatttggtaat 56
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 ttatggaatatactgtttcaatgaattatcctattgattcatgggaatttggtaat 813
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>dbj|AK098886.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001J13, full
           insert sequence
          Length = 2101

 Score =  113 bits (57), Expect = 2e-22
 Identities = 153/185 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   atggaatatactgtttcaatgaattatcctattgattcatgggaatttggtaatgaattg 62
           ||||| || |||||||| ||||| || ||||| || |||||||||||||||||||| |||
Sbjct: 784 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggtaatgagttg 843

                                                                       
Query: 63  agtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaagatctggttgaa 122
           ||||||||| |||| |||||||| || || || |||||||| ||||||||| |  |||| 
Sbjct: 844 agtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaagatataattgag 903

                                                                       
Query: 123 cttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattggtgctagcccca 182
           ||  | || ||| ||   |||||||||| ||||||||| | |||||||||| | ||||||
Sbjct: 904 ctcaagaacatcatcagccagttatatggaaactctaggaaaccattggtggttgcccca 963

                
Query: 183 ggagg 187
           |||||
Sbjct: 964 ggagg 968
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>dbj|AK060767.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-033-A11, full
           insert sequence
          Length = 2105

 Score =  113 bits (57), Expect = 2e-22
 Identities = 153/185 (82%)
 Strand = Plus / Plus

                                                                       
Query: 3   atggaatatactgtttcaatgaattatcctattgattcatgggaatttggtaatgaattg 62
           ||||| || |||||||| ||||| || ||||| || |||||||||||||||||||| |||
Sbjct: 785 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggtaatgagttg 844

                                                                       
Query: 63  agtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaagatctggttgaa 122
           ||||||||| |||| |||||||| || || || |||||||| ||||||||| |  |||| 
Sbjct: 845 agtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaagatataattgag 904

                                                                       
Query: 123 cttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattggtgctagcccca 182
           ||  | || ||| ||   |||||||||| ||||||||| | |||||||||| | ||||||
Sbjct: 905 ctcaagaacatcatcagccagttatatggaaactctaggaaaccattggtggttgcccca 964

                
Query: 183 ggagg 187
           |||||
Sbjct: 965 ggagg 969
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                            
Query: 51       ggtaatgaattgagtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaa 110
                |||||||| |||||||||||| |||| |||||||| || || || |||||||| ||||||
Sbjct: 23967514 ggtaatgagttgagtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaa 23967573

                                                                            
Query: 111      gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattg 170
                ||| |  |||| ||  | || ||| ||   |||||||||| ||||||||| | |||||||
Sbjct: 23967574 gatataattgagctcaagaacatcatcagccagttatatggaaactctaggaaaccattg 23967633

                                 
Query: 171      gtgctagccccaggagg 187
                ||| | |||||||||||
Sbjct: 23967634 gtggttgccccaggagg 23967650



 Score = 48.1 bits (24), Expect = 0.010
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 3        atggaatatactgtttcaatgaattatcctattgattcatgggaatttggta 54
                ||||| || |||||||| ||||| || ||||| || ||||||||||||||||
Sbjct: 23967363 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggta 23967414
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 112/137 (81%)
 Strand = Plus / Plus

                                                                            
Query: 51       ggtaatgaattgagtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaa 110
                |||||||| |||||||||||| |||| |||||||| || || || |||||||| ||||||
Sbjct: 23895720 ggtaatgagttgagtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaa 23895779

                                                                            
Query: 111      gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattg 170
                ||| |  |||| ||  | || ||| ||   |||||||||| ||||||||| | |||||||
Sbjct: 23895780 gatataattgagctcaagaacatcatcagccagttatatggaaactctaggaaaccattg 23895839

                                 
Query: 171      gtgctagccccaggagg 187
                ||| | |||||||||||
Sbjct: 23895840 gtggttgccccaggagg 23895856



 Score = 48.1 bits (24), Expect = 0.010
 Identities = 45/52 (86%)
 Strand = Plus / Plus

                                                                    
Query: 3        atggaatatactgtttcaatgaattatcctattgattcatgggaatttggta 54
                ||||| || |||||||| ||||| || ||||| || ||||||||||||||||
Sbjct: 23895569 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggta 23895620
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>emb|AL731884.4|CNS08C8O Oryza sativa chromosome 12, . BAC OSJNBa0014A07 of library OSJNBa
            from chromosome 12 of cultivar Nipponbare of ssp.
            japonica of Oryza sativa (rice), complete sequence
          Length = 144767

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 112/137 (81%)
 Strand = Plus / Minus

                                                                        
Query: 51   ggtaatgaattgagtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaa 110
            |||||||| |||||||||||| |||| |||||||| || || || |||||||| ||||||
Sbjct: 5668 ggtaatgagttgagtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaa 5609

                                                                        
Query: 111  gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattg 170
            ||| |  |||| ||  | || ||| ||   |||||||||| ||||||||| | |||||||
Sbjct: 5608 gatataattgagctcaagaacatcatcagccagttatatggaaactctaggaaaccattg 5549

                             
Query: 171  gtgctagccccaggagg 187
            ||| | |||||||||||
Sbjct: 5548 gtggttgccccaggagg 5532



 Score = 48.1 bits (24), Expect = 0.010
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                
Query: 3    atggaatatactgtttcaatgaattatcctattgattcatgggaatttggta 54
            ||||| || |||||||| ||||| || ||||| || ||||||||||||||||
Sbjct: 5819 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggta 5768
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>emb|AL928774.3|CNS08CC4 Oryza sativa chromosome 12, . BAC OSJNBa0078O17 of library OSJNBa from
              chromosome 12 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 176388

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 112/137 (81%)
 Strand = Plus / Minus

                                                                          
Query: 51     ggtaatgaattgagtggaagtagaatcggtgcaagcgtgggggccgaacaatacggaaaa 110
              |||||||| |||||||||||| |||| |||||||| || || || |||||||| ||||||
Sbjct: 119882 ggtaatgagttgagtggaagtggaattggtgcaagtgttggagctgaacaatatggaaaa 119823

                                                                          
Query: 111    gatctggttgaacttcaaaagatcgtcgatcagttatatgaaaactctagcacaccattg 170
              ||| |  |||| ||  | || ||| ||   |||||||||| ||||||||| | |||||||
Sbjct: 119822 gatataattgagctcaagaacatcatcagccagttatatggaaactctaggaaaccattg 119763

                               
Query: 171    gtgctagccccaggagg 187
              ||| | |||||||||||
Sbjct: 119762 gtggttgccccaggagg 119746



 Score = 48.1 bits (24), Expect = 0.010
 Identities = 45/52 (86%)
 Strand = Plus / Minus

                                                                  
Query: 3      atggaatatactgtttcaatgaattatcctattgattcatgggaatttggta 54
              ||||| || |||||||| ||||| || ||||| || ||||||||||||||||
Sbjct: 120033 atggagtacactgtttcgatgaactaccctatagactcatgggaatttggta 119982
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>dbj|AP004534.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT14P20, TM0087,
              complete sequence
          Length = 124300

 Score = 46.1 bits (23), Expect = 0.038
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 33     attgattcatgggaatttggtaa 55
              |||||||||||||||||||||||
Sbjct: 116127 attgattcatgggaatttggtaa 116149
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>gb|BT013740.1| Lycopersicon esculentum clone 132601F, mRNA sequence
          Length = 2024

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 39  tcatgggaatttggtaatgaattgagtgg 67
           |||||||||||||| ||||| ||||||||
Sbjct: 820 tcatgggaatttggaaatgagttgagtgg 848
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>gb|AC023748.4| Drosophila melanogaster X BAC RP98-36F8 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 156096

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     aatgaattgagtggaagtaga 74
              |||||||||||||||||||||
Sbjct: 142276 aatgaattgagtggaagtaga 142256
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>gb|AC023724.5| Drosophila melanogaster X BAC RP98-14B2 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 181974

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 54     aatgaattgagtggaagtaga 74
              |||||||||||||||||||||
Sbjct: 110211 aatgaattgagtggaagtaga 110191
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>gb|AE003445.2| Drosophila melanogaster chromosome X, section 29 of 74 of the complete
             sequence
          Length = 334222

 Score = 42.1 bits (21), Expect = 0.59
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 54    aatgaattgagtggaagtaga 74
             |||||||||||||||||||||
Sbjct: 44112 aatgaattgagtggaagtaga 44132
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>ref|NM_127903.3| Arabidopsis thaliana unknown protein AT2G23390 mRNA, complete cds
          Length = 1749

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 34 ttgattcatgggaatttggt 53
          ||||||||||||||||||||
Sbjct: 22 ttgattcatgggaatttggt 3
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>gb|AC144633.3| Mus musculus BAC clone RP23-26J4 from chromosome 7, complete sequence
          Length = 223362

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 113    tctggttgaacttcaaaaga 132
              ||||||||||||||||||||
Sbjct: 106228 tctggttgaacttcaaaaga 106247
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>gb|AC115298.6| Mus musculus BAC clone RP23-224G24 from X, complete sequence
          Length = 184032

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 150    gaaaactctagcacaccatt 169
              ||||||||||||||||||||
Sbjct: 128109 gaaaactctagcacaccatt 128090
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>gb|AY094462.1| Arabidopsis thaliana At2g23390/F26B6.4 mRNA, complete cds
          Length = 1640

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                              
Query: 34 ttgattcatgggaatttggt 53
          ||||||||||||||||||||
Sbjct: 22 ttgattcatgggaatttggt 3
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>gb|AC003040.3| Arabidopsis thaliana chromosome 2 clone F26B6 map CIC06C07, complete
             sequence
          Length = 123360

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 34    ttgattcatgggaatttggt 53
             ||||||||||||||||||||
Sbjct: 14963 ttgattcatgggaatttggt 14982
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>gb|AC102298.14| Mus musculus chromosome 7, clone RP24-396N13, complete sequence
          Length = 187811

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    tctggttgaacttcaaaaga 132
              ||||||||||||||||||||
Sbjct: 165972 tctggttgaacttcaaaaga 165953
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>gb|AC148372.3| Carollia perspicillata clone 102I5, complete sequence
          Length = 161035

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 10     atactgtttcaatgaattat 29
              ||||||||||||||||||||
Sbjct: 141647 atactgtttcaatgaattat 141628
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>gb|AC126803.4| Mus musculus BAC clone RP24-549B23 from 3, complete sequence
          Length = 140864

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 145   tatatgaaaactctagcaca 164
             ||||||||||||||||||||
Sbjct: 92794 tatatgaaaactctagcaca 92775
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>gb|DP000018.1| Carollia perspicillata target 1 genomic scaffold
          Length = 1501503

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 10      atactgtttcaatgaattat 29
               ||||||||||||||||||||
Sbjct: 1482115 atactgtttcaatgaattat 1482096
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>ref|XM_385621.1| Gibberella zeae PH-1 chromosome 3 predicted protein (FG05445.1)
           partial mRNA
          Length = 489

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 ggttgaacttcaaaagatc 134
           |||||||||||||||||||
Sbjct: 255 ggttgaacttcaaaagatc 273
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>emb|Z78199.1|CEK12F2 Caenorhabditis elegans Cosmid K12F2, complete sequence
          Length = 12999

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 119  tgaacttcaaaagatcgtc 137
            |||||||||||||||||||
Sbjct: 6931 tgaacttcaaaagatcgtc 6913
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>gb|U50067.2| Caenorhabditis elegans cosmid C18F3, complete sequence
          Length = 32793

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 10   atactgtttcaatgaatta 28
            |||||||||||||||||||
Sbjct: 1474 atactgtttcaatgaatta 1456
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>emb|AL161426.7| Human DNA sequence from clone RP11-23P11 on chromosome 13 Contains part
             of the GPC6 gene for glypican 6 and the 3' end of a novel
             gene, complete sequence
          Length = 150021

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 34    ttgattcatgggaatttgg 52
             |||||||||||||||||||
Sbjct: 84244 ttgattcatgggaatttgg 84226
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>emb|X08067.1|CEMYO3 Caenorhabditis elegans myo-3 gene for myosin heavy chain 3 (MHC-A)
          Length = 11621

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 119  tgaacttcaaaagatcgtc 137
            |||||||||||||||||||
Sbjct: 8932 tgaacttcaaaagatcgtc 8950
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>gb|AC109998.2| Homo sapiens chromosome 5 clone CTD-2203A3, complete sequence
          Length = 126394

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 11    tactgtttcaatgaattat 29
             |||||||||||||||||||
Sbjct: 52398 tactgtttcaatgaattat 52416
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>gb|AC091903.2| Homo sapiens chromosome 5 clone RP11-182I21, complete sequence
          Length = 194860

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 11   tactgtttcaatgaattat 29
            |||||||||||||||||||
Sbjct: 2167 tactgtttcaatgaattat 2149
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>ref|NM_073664.3| Caenorhabditis elegans MYOsin heavy chain structural genes family
            member (myo-3) (myo-3) mRNA, complete cds
          Length = 6059

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 119  tgaacttcaaaagatcgtc 137
            |||||||||||||||||||
Sbjct: 4611 tgaacttcaaaagatcgtc 4629
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>gb|DQ026625.1| Tetracymbaliella cymbalifera voucher Frahm 1-23 (MO-5131915)
           tRNA-Leu (trnL) gene, partial sequence; trnL-trnF
           intergenic spacer, complete sequence; and tRNA-Phe
           (trnF) gene, partial sequence; chloroplast
          Length = 458

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 24  aattatcctattgattcat 42
           |||||||||||||||||||
Sbjct: 207 aattatcctattgattcat 189
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>gb|AC058785.8|AC058785 Arabidopsis thaliana chromosome 1 BAC F13N6 genomic sequence, complete
             sequence
          Length = 90698

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 47    atttggtaatgaattgagt 65
             |||||||||||||||||||
Sbjct: 17365 atttggtaatgaattgagt 17383
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>gb|AC069159.8|AC069159 Arabidopsis thaliana chromosome 1 BAC F14G9 genomic sequence,
           complete sequence
          Length = 111481

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 47  atttggtaatgaattgagt 65
           |||||||||||||||||||
Sbjct: 866 atttggtaatgaattgagt 848
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>gb|AE014133.1| Streptococcus mutans UA159, complete genome
          Length = 2030921

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 97      aacaatacggaaaagatctggtt 119
               ||||||||||||| |||||||||
Sbjct: 1722867 aacaatacggaaatgatctggtt 1722889
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>emb|CR382129.1| Yarrowia lipolytica chromosome C of strain CLIB122 of Yarrowia lipolytica
          Length = 3272609

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 4      tggaatatactgtttcaat 22
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Sbjct: 514790 tggaatatactgtttcaat 514772
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>emb|AL928909.7| Mouse DNA sequence from clone RP23-320I18 on chromosome 2, complete
             sequence
          Length = 187340

 Score = 38.2 bits (19), Expect = 9.2
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 106   gaaaagatctggttgaact 124
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Sbjct: 77798 gaaaagatctggttgaact 77816


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,461,823
Number of Sequences: 3902068
Number of extensions: 1461823
Number of successful extensions: 92673
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92461
Number of HSP's gapped (non-prelim): 212
length of query: 187
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 165
effective length of database: 17,147,199,772
effective search space: 2829287962380
effective search space used: 2829287962380
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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