>CUL1_ARATH (Q94AH6) Cullin-1|
          Length = 738

 Score = 79.3 bits (194), Expect = 3e-15
 Identities = 39/63 (61%), Positives = 45/63 (71%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKIPLPPXXXXXXXXXXXXXXRRYAIDASI 181
           KIL KEP+ +++S ND FEFNSKFTD+MRRIKIPLPP              RRYAIDA+I
Sbjct: 618 KILLKEPNTKTVSQNDAFEFNSKFTDRMRRIKIPLPPVDERKKVVEDVDKDRRYAIDAAI 677

Query: 182 VRI 190
           VRI
Sbjct: 678 VRI 680

>CUL3_MOUSE (Q9JLV5) Cullin-3 (CUL-3)|
          Length = 768

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXXXXXRRY 163
           ++LTKEP ++ I    +F  N +FT K+ R+KI                        R++
Sbjct: 642 RVLTKEPKSKEIESGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKH 701

Query: 164 AIDASIVRI 190
            I+A+IVRI
Sbjct: 702 EIEAAIVRI 710

>CUL3_HUMAN (Q13618) Cullin-3 (CUL-3)|
          Length = 768

 Score = 38.1 bits (87), Expect = 0.006
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKIPLPPXXXXXX------XXXXXXXXRRY 163
           ++LTKEP ++ I    +F  N +FT K+ R+KI                        R++
Sbjct: 642 RVLTKEPKSKEIENGHIFTVNDQFTSKLHRVKIQTVAAKQGESDPERKETRQKVDDDRKH 701

Query: 164 AIDASIVRI 190
            I+A+IVRI
Sbjct: 702 EIEAAIVRI 710

>CUL4A_HUMAN (Q13619) Cullin-4A (CUL-4A)|
          Length = 659

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKI----PLPPXXXXXXXXXXXXXXRRYAI 169
           ++L K P  + +   D F FN +F  K+ RIKI                      R+Y I
Sbjct: 537 RVLIKSPKGKEVEDGDKFIFNGEFKHKLFRIKINQIQMKETVEEQVSTTERVFQDRQYQI 596

Query: 170 DASIVRI 190
           DA+IVRI
Sbjct: 597 DAAIVRI 603

>CUL3_SCHPO (Q09760) Cullin-3 (Cul-3)|
          Length = 785

 Score = 35.8 bits (81), Expect = 0.032
 Identities = 21/69 (30%), Positives = 29/69 (42%), Gaps = 6/69 (8%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKIP------LPPXXXXXXXXXXXXXXRRY 163
           KIL K+P  R ++  D F FN  F   + RIKI       +                R++
Sbjct: 659 KILLKDPKGREVNAGDKFYFNENFVSNLARIKISTVAQTRVEDDSERKRTLEKVDESRKH 718

Query: 164 AIDASIVRI 190
             DA IVR+
Sbjct: 719 QADACIVRV 727

>CUL4B_HUMAN (Q13620) Cullin-4B (CUL-4B)|
          Length = 895

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 22/67 (32%), Positives = 28/67 (41%), Gaps = 4/67 (5%)
 Frame = +2

Query: 2   KILTKEPSNRSISPNDVFEFNSKFTDKMRRIKI----PLPPXXXXXXXXXXXXXXRRYAI 169
           ++L K P  + I   D F  N  F  K+ RIKI                      R+Y I
Sbjct: 773 RVLAKNPKGKDIEDGDKFICNDDFKHKLFRIKINQIQMKETVEEQASTTERVFQDRQYQI 832

Query: 170 DASIVRI 190
           DA+IVRI
Sbjct: 833 DAAIVRI 839

>CUL4_SCHPO (O14122) Cullin-4 (Cul-4)|
          Length = 734

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 14/31 (45%), Positives = 20/31 (64%)
 Frame = +2

Query: 8   LTKEPSNRSISPNDVFEFNSKFTDKMRRIKI 100
           L   P ++  SP+ +F  N KFTDK+ R+KI
Sbjct: 614 LVMVPKSKKPSPDTMFYVNEKFTDKLYRVKI 644

>CUL4_CAEEL (Q17392) Cullin-4|
          Length = 840

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
 Frame = +2

Query: 44  NDVFEFNSKFTDKMRRIKIP----LPPXXXXXXXXXXXXXXRRYAIDASIVRI 190
           N+ F  NSKFT+K  R++I                      R+Y IDA++VRI
Sbjct: 732 NEKFVVNSKFTEKRCRVRIAQVNIKTAVEETKEVKEEVNSDRQYKIDAAVVRI 784


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,795,628
Number of Sequences: 219361
Number of extensions: 210366
Number of successful extensions: 468
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 465
length of database: 80,573,946
effective HSP length: 39
effective length of database: 72,018,867
effective search space used: 1728452808
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)