ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet81b07 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF182197.1|AF182197 Hordeum vulgare RNase S-like protein precursor (rsh1) gene, complete cds Length = 3758 Score = 291 bits (147), Expect = 6e-76 Identities = 147/147 (100%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 175 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2359 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 2418 Query: 176 cgtgccggcggccgacttctacgtctcgggctttactgtcttgaacgcgacgaccgacgc 235 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2419 cgtgccggcggccgacttctacgtctcgggctttactgtcttgaacgcgacgaccgacgc 2478 Query: 236 ccccgagaccagctgcagcagtactcc 262 ||||||||||||||||||||||||||| Sbjct: 2479 ccccgagaccagctgcagcagtactcc 2505 Score = 230 bits (116), Expect = 2e-57 Identities = 116/116 (100%) Strand = Plus / Plus Query: 1 agcaaggtttcggtatggctttcaggagagcactgttgtgccttcttggcatgctgatag 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1829 agcaaggtttcggtatggctttcaggagagcactgttgtgccttcttggcatgctgatag 1888 Query: 61 cttcctctgccattgccgtttctgattctggtatctactaccagattggtttgatg 116 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1889 cttcctctgccattgccgtttctgattctggtatctactaccagattggtttgatg 1944
>dbj|AK109411.2| Oryza sativa (japonica cultivar-group) cDNA clone:006-303-E09, full insert sequence Length = 1114 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK119171.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-036-H08, full insert sequence Length = 1096 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104648.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-H05, full insert sequence Length = 1114 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104456.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-A10, full insert sequence Length = 1077 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 154 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 213 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 214 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 261
>dbj|AK104390.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-201-H04, full insert sequence Length = 1085 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104263.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-D05, full insert sequence Length = 1114 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104261.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-B09, full insert sequence Length = 1140 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK104237.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-H08, full insert sequence Length = 1173 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK061442.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-C07, full insert sequence Length = 1151 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AK059757.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-203-D06, full insert sequence Length = 1173 Score = 71.9 bits (36), Expect = 1e-09 Identities = 90/108 (83%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaagagccccatcgtgccggcggccgacttctacgtc 200 ||||||||||| |||| | | ||| ||||||| |||||||||||||| Sbjct: 219 tgctgcatgccgaagaccgacgtcgcgccggcgtccgacttctacgtc 266
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 58.0 bits (29), Expect = 1e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 175 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 20865311 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 20865252 Query: 176 cgtgccggcggccgacttctacgtc 200 || ||||||| |||||||||||||| Sbjct: 20865251 cgcgccggcgtccgacttctacgtc 20865227
>dbj|AP006174.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0229B10 Length = 114509 Score = 58.0 bits (29), Expect = 1e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 175 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 57537 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 57478 Query: 176 cgtgccggcggccgacttctacgtc 200 || ||||||| |||||||||||||| Sbjct: 57477 cgcgccggcgtccgacttctacgtc 57453
>dbj|AP006067.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0569E11 Length = 157319 Score = 58.0 bits (29), Expect = 1e-05 Identities = 71/85 (83%) Strand = Plus / Minus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgcatgcccaagagccccat 175 |||||||||||| ||||| | |||||| | | ||||||||||||||| |||| | | | Sbjct: 140340 gtggccgggagcgtactgcgcgcagacgaaggccggatgctgcatgccgaagaccgacgt 140281 Query: 176 cgtgccggcggccgacttctacgtc 200 || ||||||| |||||||||||||| Sbjct: 140280 cgcgccggcgtccgacttctacgtc 140256
>dbj|AK060036.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-304-A10, full insert sequence Length = 1127 Score = 56.0 bits (28), Expect = 6e-05 Identities = 64/76 (84%) Strand = Plus / Plus Query: 93 atctactaccagattggtttgatgtggccgggagcatactgtgtgcagaccaccggcgga 152 |||| |||||||||| ||| |||||||||||||| ||||| | |||||| | | |||| Sbjct: 159 atcttctaccagattactttcatgtggccgggagcgtactgcgcgcagacgaaggccgga 218 Query: 153 tgctgcatgcccaaga 168 ||||||||||| |||| Sbjct: 219 tgctgcatgccgaaga 234
>gb|AY104404.1| Zea mays PCO098786 mRNA sequence Length = 1018 Score = 46.1 bits (23), Expect = 0.055 Identities = 47/55 (85%) Strand = Plus / Plus Query: 90 ggtatctactaccagattggtttgatgtggccgggagcatactgtgtgcagacca 144 ||||||||||||||| | | | | |||||||| ||||||||||| | |||||||| Sbjct: 108 ggtatctactaccagctggctcttatgtggccaggagcatactgcgagcagacca 162
>gb|U66241.1|ZMU66241 Zea mays S-like RNase (kin1) mRNA, complete cds Length = 988 Score = 46.1 bits (23), Expect = 0.055 Identities = 47/55 (85%) Strand = Plus / Plus Query: 90 ggtatctactaccagattggtttgatgtggccgggagcatactgtgtgcagacca 144 ||||||||||||||| | | | | |||||||| ||||||||||| | |||||||| Sbjct: 97 ggtatctactaccagctggctcttatgtggccaggagcatactgcgagcagacca 151
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 106 ttggtttgatgtggccggga 125 |||||||||||||||||||| Sbjct: 2657933 ttggtttgatgtggccggga 2657914
>emb|Z81540.1|CEF46B3 Caenorhabditis elegans Cosmid F46B3, complete sequence Length = 39165 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcaggagagcactgttgtgc 41 |||||||||||||||||||| Sbjct: 31799 tcaggagagcactgttgtgc 31780
>gb|AC158982.2| Mus musculus BAC clone RP23-235N21 from chromosome 14, complete sequence Length = 208135 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 79 tttctgattctggtatctac 98 |||||||||||||||||||| Sbjct: 130142 tttctgattctggtatctac 130123
>emb|Z82195.2|HS274L7 Human DNA sequence from clone RP1-274L7 on chromosome X Contains a novel gene and a novel gene similar to uncharacterized hypothalamus protein HT011, complete sequence Length = 119566 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 accagattggtttgatgtgg 119 |||||||||||||||||||| Sbjct: 99801 accagattggtttgatgtgg 99820
>emb|AL450328.6| Human DNA sequence from clone RP11-193H22 on chromosome 6, complete sequence Length = 119389 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 accagattggtttgatgtgg 119 |||||||||||||||||||| Sbjct: 69701 accagattggtttgatgtgg 69682
>emb|AJ229043.1| Homo sapiens 959 kb contig between AML1 and CBR1 on chromosome 21q22, segment 3/3 Length = 288002 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 15 atggctttcaggagagcactgttg 38 ||||||||||||||| |||||||| Sbjct: 80871 atggctttcaggagaacactgttg 80894
>gb|AC152833.3| Ornithorhynchus anatinus BAC clone OABb-6A1 from chromosome unknown, complete sequence Length = 141309 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 124 gagcatactgtgtgcagaccaccg 147 |||| ||||||||||||||||||| Sbjct: 43861 gagcttactgtgtgcagaccaccg 43838
>gb|DQ427569.1| Sorghum propinquum locus CSU705 genomic sequence Length = 667 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 352 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 395
>gb|DQ427568.1| Sorghum bicolor voucher PI585454 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427567.1| Sorghum bicolor voucher PI267539 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427566.1| Sorghum bicolor voucher PI267408 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427565.1| Sorghum bicolor voucher PI221607 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427564.1| Sorghum bicolor voucher PI152702 locus CSU705 genomic sequence Length = 684 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 353 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 396
>gb|DQ427563.1| Sorghum bicolor voucher NSL92371 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427562.1| Sorghum bicolor voucher NSL87902 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427561.1| Sorghum bicolor voucher NSL87666 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427560.1| Sorghum bicolor voucher NSL77217 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427559.1| Sorghum bicolor voucher NSL77034 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427558.1| Sorghum bicolor voucher NSL56174 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427557.1| Sorghum bicolor voucher NSL56003 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427556.1| Sorghum bicolor voucher NSL55243 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427555.1| Sorghum bicolor voucher NSL51365 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|DQ427554.1| Sorghum bicolor voucher NSL51030 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427553.1| Sorghum bicolor voucher NSL50875 locus CSU705 genomic sequence Length = 691 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 360 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 403
>gb|DQ427552.1| Sorghum bicolor voucher BTx623 locus CSU705 genomic sequence Length = 702 Score = 40.1 bits (20), Expect = 3.4 Identities = 38/44 (86%) Strand = Plus / Plus Query: 116 gtggccgggagcatactgtgtgcagaccaccggcggatgctgca 159 |||||| ||||||||||| | |||||||| || |||||||||| Sbjct: 368 gtggccaggagcatactgcgagcagaccaacgctggatgctgca 411
>gb|AF495872.1| Triticum aestivum S-like RNase mRNA, complete cds Length = 901 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Plus Query: 114 atgtggccgggagcatactgtgtg 137 |||||||| ||||||||||||||| Sbjct: 133 atgtggcctggagcatactgtgtg 156
>ref|NM_075580.2| Caenorhabditis elegans Serpentine Receptor, class Z family member (srz-18) (srz-18) mRNA, complete cds Length = 981 Score = 40.1 bits (20), Expect = 3.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 22 tcaggagagcactgttgtgc 41 |||||||||||||||||||| Sbjct: 671 tcaggagagcactgttgtgc 652
>gb|AF015262.2|AF015262 Homo sapiens chromosome 21 clone Pac 255P7 map 21q-AML, complete sequence Length = 250598 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 atggctttcaggagagcactgttg 38 ||||||||||||||| |||||||| Sbjct: 207132 atggctttcaggagaacactgttg 207109
>dbj|BS000195.1| Pan troglodytes chromosome 22 clone:PTB-014E11, map 22, complete sequences Length = 251753 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 atggctttcaggagagcactgttg 38 ||||||||||||||| |||||||| Sbjct: 137539 atggctttcaggagaacactgttg 137516
>emb|AL163267.2|HS21C067 Homo sapiens chromosome 21 segment HS21C067 Length = 340000 Score = 40.1 bits (20), Expect = 3.4 Identities = 23/24 (95%) Strand = Plus / Minus Query: 15 atggctttcaggagagcactgttg 38 ||||||||||||||| |||||||| Sbjct: 109206 atggctttcaggagaacactgttg 109183 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,821,737 Number of Sequences: 3902068 Number of extensions: 1821737 Number of successful extensions: 32851 Number of sequences better than 10.0: 47 Number of HSP's better than 10.0 without gapping: 47 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 32764 Number of HSP's gapped (non-prelim): 87 length of query: 262 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 240 effective length of database: 17,147,199,772 effective search space: 4115327945280 effective search space used: 4115327945280 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
