ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81b04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein g... 278 8e-72
2emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putat... 242 4e-61
3gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding p... 129 4e-27
4gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds 100 4e-18
5emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein 98 2e-17
6gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B... 56 5e-05
7gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B... 56 5e-05
8emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chloro... 56 5e-05
9dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
10dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
11dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 56 5e-05
12emb|X05823.1|TACAB1G5 Wheat Cab-1 gene 5' upstream region for ch... 56 5e-05
13dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
14dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
15dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
16dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
17dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 56 5e-05
18emb|X07746.1|TACAB1UP Triticum aestivum Cab-1 gene upstream region 56 5e-05
19dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRN... 56 5e-05
20ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predic... 54 2e-04
21dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
22dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic D... 54 2e-04
23dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
24dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clon... 54 2e-04
25emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chloro... 54 2e-04
26ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predic... 52 8e-04
27gb|AY100470.1| Oryza sativa (indica cultivar-group) putative sol... 52 8e-04
28dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic D... 52 8e-04
29gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/... 52 8e-04
30emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll ... 52 8e-04
31dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
32dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
33dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
34dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clon... 52 8e-04
35gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protei... 52 8e-04
36ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BIND... 50 0.003
37gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B... 50 0.003
38gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-bin... 50 0.003
39gb|AY050935.1| Arabidopsis thaliana putative photosystem II type... 50 0.003
40gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, com... 50 0.003
41gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 m... 50 0.003
42gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, com... 50 0.003
43emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Co... 50 0.003
44emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Co... 50 0.003
45gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P... 50 0.003
46gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N... 50 0.003
47emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophy... 50 0.003
48emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chl... 48 0.013
49emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMW... 48 0.013
50emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlo... 48 0.013
51gb|AY109324.1| Zea mays CL187_1 mRNA sequence 48 0.013
52emb|BX817733.1|CNS0AE6W Arabidopsis thaliana Full-length cDNA Co... 46 0.051
53ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2... 44 0.20
54ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2... 44 0.20
55ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll bindin... 44 0.20
56ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) ... 44 0.20
57gb|AY142513.1| Arabidopsis thaliana putative photosystem II type... 44 0.20
58gb|AY045806.1| Arabidopsis thaliana putative photosystem II type... 44 0.20
59gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 ma... 44 0.20
60gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 ma... 44 0.20
61gb|AY081587.1| Arabidopsis thaliana photosystem II type I chloro... 44 0.20
62gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co... 44 0.20
63gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co... 44 0.20
64gb|AY065125.1| Arabidopsis thaliana photosystem II type I chloro... 44 0.20
65gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 ... 44 0.20
66gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 ... 44 0.20
67gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 ... 44 0.20
68gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, co... 44 0.20
69gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 ... 44 0.20
70emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Co... 44 0.20
71emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Co... 44 0.20
72emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Co... 44 0.20
73emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Co... 44 0.20
74emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Co... 44 0.20
75emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Co... 44 0.20
76emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II c... 44 0.20
77dbj|D78207.1|PHNCABBP Japanese morning glory mRNA for chlorophyl... 44 0.20
78dbj|AB012641.1| Nicotiana sylvestris Lhcb1*9 gene for light harv... 44 0.20
79gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome... 42 0.79
80gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding p... 42 0.79
81gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosom... 40 3.1
82ref|XM_509787.1| PREDICTED: Pan troglodytes similar to DEAD/H (A... 40 3.1
83gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence 40 3.1
84gb|BC012677.1| Mus musculus sulfotransferase family 5A, member 1... 40 3.1
85gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosom... 40 3.1
86gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete... 40 3.1
87gb|BC039829.1| Homo sapiens integrator complex subunit 6, transc... 40 3.1
88gb|BC013358.2| Homo sapiens integrator complex subunit 6, mRNA (... 40 3.1
89gb|BC094745.1| Homo sapiens integrator complex subunit 6, mRNA (... 40 3.1
90emb|AL137780.10| Human DNA sequence from clone RP11-24B19 on chr... 40 3.1
91gb|AC183284.3| Pan troglodytes BAC clone CH251-413D13 from chrom... 40 3.1
92gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, comp... 40 3.1
93ref|NM_001039937.1| Homo sapiens integrator complex subunit 6 (I... 40 3.1
94ref|NM_012141.2| Homo sapiens integrator complex subunit 6 (INTS... 40 3.1
95dbj|AK128795.1| Homo sapiens cDNA FLJ45485 fis, clone BRTHA20026... 40 3.1
96dbj|AK096696.1| Homo sapiens cDNA FLJ39377 fis, clone PERIC20001... 40 3.1
97dbj|AK074946.1| Homo sapiens cDNA FLJ90465 fis, clone NT2RP30022... 40 3.1
98gb|AE011666.1| Xanthomonas axonopodis pv. citri str. 306, secti... 40 3.1
99gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hr... 40 3.1
100ref|NM_165664.1| Drosophila melanogaster CG8026-RA, transcript v... 40 3.1
101ref|NM_136624.2| Drosophila melanogaster CG8026-RB, transcript v... 40 3.1
102dbj|AK131654.1| Mus musculus adult male cerebellum cDNA, RIKEN f... 40 3.1
103dbj|AK142243.1| Mus musculus 13 days embryo heart cDNA, RIKEN fu... 40 3.1
104dbj|AK164155.1| Mus musculus adult male hippocampus cDNA, RIKEN ... 40 3.1
105gb|AY060332.1| Drosophila melanogaster GH22139 full length cDNA 40 3.1
106tpg|BK005730.1| TPA: TPA_exp: Homo sapiens integrator complex su... 40 3.1
107gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, r... 40 3.1
108gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/... 40 3.1
109emb|X52743.1|NTCAB21 Tabacco Cab21 mRNA for major chlorophyll a/... 40 3.1
110gb|AC006384.2|AC006384 Homo sapiens BAC clone RP11-557I6 from 7q... 40 3.1
111gb|AF097645.1|AF097645 Homo sapiens candidate tumor suppressor p... 40 3.1
112emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in ... 40 3.1
113gb|AF160974.1|AF160974 Xanthomonas campestris pv. glycines HrcU ... 40 3.1
114gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16... 40 3.1
115emb|AL833524.1|HSM804837 Homo sapiens mRNA; cDNA DKFZp686I1337 (... 40 3.1
116gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding p... 40 3.1
117gb|U21112.1|STU21112 Solanum tuberosum chlorophyll a/b binding p... 40 3.1
118gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding p... 40 3.1
119gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding p... 40 3.1
120emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll ... 40 3.1
121gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosom... 40 3.1
122gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene ... 40 3.1
123dbj|AB012637.1| Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 g... 40 3.1 
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds
          Length = 1191

 Score =  278 bits (140), Expect = 8e-72
 Identities = 176/188 (93%)
 Strand = Plus / Plus

                                                                       
Query: 56  tgcagcgcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggcc 115
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tgcagcgcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggcc 251

                                                                       
Query: 116 ctgaagaacttgccctcgccggctctcattggcgaggcacgtgtgaccatgcgcaagaca 175
            | ||||||||||||||| ||||||||||||| || |||||||||| |||||||||||| 
Sbjct: 252 gtcaagaacttgccctcgtcggctctcattggtgacgcacgtgtgaacatgcgcaagact 311

                                                                       
Query: 176 gccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgtgctc 235
           || ||||||||||| || ||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 312 gcggcgaaggccaaacaagtttcgtcgagcagcccgtggtacggctctgaccgtgtgctc 371

                   
Query: 236 tacctcgg 243
           ||||||||
Sbjct: 372 tacctcgg 379



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 4   tccacacactcaagcctcattcttggagaacacacag 40
           |||||||||||||||| || | |||||||||||||||
Sbjct: 138 tccacacactcaagccacactattggagaacacacag 174
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>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b
           binding protein (cab gene)
          Length = 760

 Score =  242 bits (122), Expect = 4e-61
 Identities = 161/174 (92%)
 Strand = Plus / Plus

                                                                       
Query: 70  ggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaagaacttgcc 129
           ||||||||||||||||| |||||||||||||||||||||||||||| | |||||||||||
Sbjct: 1   ggccaccaccatgtctcgttcctcttcgtccttcgccggcaaggccgtcaagaacttgcc 60

                                                                       
Query: 130 ctcgccggctctcattggcgaggcacgtgtgaccatgcgcaagacagccgcgaaggccaa 189
           |||| ||||||||||||| || |||||||||| |||||||||||| || |||||||||||
Sbjct: 61  ctcgtcggctctcattggtgacgcacgtgtgaacatgcgcaagactgcggcgaaggccaa 120

                                                                 
Query: 190 gcaggtttcgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
            || ||||||||| ||||||| ||||||||||||||||||||||||||||||||
Sbjct: 121 acaagtttcgtcgagcagcccgtggtacggctctgaccgtgtgctctacctcgg 174
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>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor
           (Wcab) mRNA, complete cds
          Length = 918

 Score =  129 bits (65), Expect = 4e-27
 Identities = 152/181 (83%)
 Strand = Plus / Plus

                                                                       
Query: 63  caatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaaga 122
           ||||||||||  |||||||||| || ||||| ||| |||| |||||||||||  ||||||
Sbjct: 8   caatggcggcagccaccatgtccctctcctcctcgacctttgccggcaaggcggtgaaga 67

                                                                       
Query: 123 acttgccctcgccggctctcattggcgaggcacgtgtgaccatgcgcaagacagccgcga 182
           |  | || ||   ||||||| | |||||||| || || |||||||||||||| || || |
Sbjct: 68  atgtaccatctttggctctcttgggcgaggcccgcgtcaccatgcgcaagaccgcagcaa 127

                                                                       
Query: 183 aggccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgtgctctacctcg 242
           |||| ||||||||||| || |||||||||||||||||  |||||||||||||||||||||
Sbjct: 128 aggcaaagcaggtttcctccggcagcccatggtacggtgctgaccgtgtgctctacctcg 187

            
Query: 243 g 243
           |
Sbjct: 188 g 188
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>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds
          Length = 1044

 Score = 99.6 bits (50), Expect = 4e-18
 Identities = 149/182 (81%)
 Strand = Plus / Plus

                                                                       
Query: 62  gcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaag 121
           ||||||||| ||||| | ||| | || ||| | |||||||||||||| |||||  | |||
Sbjct: 61  gcaatggcgaccaccgcgatggcgctctccccctcgtccttcgccgggaaggcggtcaag 120

                                                                       
Query: 122 aacttgccctcgccggctctcattggcgaggcacgtgtgaccatgcgcaagacagccgcg 181
            || |||| ||| |||| ||| | || ||||| || || |||||||||||||| || || 
Sbjct: 121 gacctgccgtcgtcggcgctcttcggggaggcgcgcgtcaccatgcgcaagaccgcggcc 180

                                                                       
Query: 182 aaggccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgtgctctacctc 241
           |||||||||| ||| ||||| |||||||| |||||||| || ||||| ||||||||||||
Sbjct: 181 aaggccaagccggtgtcgtccggcagcccgtggtacgggtccgaccgcgtgctctacctc 240

             
Query: 242 gg 243
           ||
Sbjct: 241 gg 242
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>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein
          Length = 934

 Score = 97.6 bits (49), Expect = 2e-17
 Identities = 148/181 (81%)
 Strand = Plus / Plus

                                                                       
Query: 63  caatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaaga 122
           |||||||||||||||||||||  || ||||| ||| | |||||||| |||||  ||||||
Sbjct: 17  caatggcggccaccaccatgtacctctcctcatcgacattcgccggaaaggcggtgaaga 76

                                                                       
Query: 123 acttgccctcgccggctctcattggcgaggcacgtgtgaccatgcgcaagacagccgcga 182
           |  | || |   |||||||| | || ||||| || || |||||||||||||| || ||||
Sbjct: 77  atgtcccattatcggctctcttcggtgaggctcgcgtcaccatgcgcaagaccgcggcga 136

                                                                       
Query: 183 aggccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgtgctctacctcg 242
           | || ||||| ||||| ||  ||||||||||||||||  |||| ||||||||||||||||
Sbjct: 137 aagctaagcaagtttcctccagcagcccatggtacggagctgatcgtgtgctctacctcg 196

            
Query: 243 g 243
           |
Sbjct: 197 g 197
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>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
           40 mRNA, complete cds
          Length = 859

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 atgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggctct 223
           ||||||||||| ||||| ||| |||||  ||| ||||| |||||||| ||||||||| | 
Sbjct: 154 atgcgcaagaccgccgccaagcccaagacggtctcgtccggcagcccgtggtacggcccg 213

                   
Query: 224 gaccgtgt 231
           ||||||||
Sbjct: 214 gaccgtgt 221
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>gb|AY389573.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
           40 (LHCP) mRNA, partial cds
          Length = 712

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 58/68 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 atgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggctct 223
           ||||||||||||| ||| ||| |||||  ||| ||||| |||||||| ||||||||| | 
Sbjct: 58  atgcgcaagacagtcgccaagcccaagacggtctcgtccggcagcccctggtacggcccg 117

                   
Query: 224 gaccgtgt 231
           ||||||||
Sbjct: 118 gaccgtgt 125
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>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding
           protein
          Length = 1664

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 537 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 596

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 597 ggcgccgaccgcgtcctctacctcgg 622
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                            
Query: 161      accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
                |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 10793075 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 10793134

                                          
Query: 218      ggctctgaccgtgtgctctacctcgg 243
                ||| | ||||| || |||||||||||
Sbjct: 10793135 ggcgccgaccgcgtcctctacctcgg 10793160
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                         
Query: 161   accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
             |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 16798 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 16857

                                       
Query: 218   ggctctgaccgtgtgctctacctcgg 243
             ||| | ||||| || |||||||||||
Sbjct: 16858 ggcgccgaccgcgtcctctacctcgg 16883
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                          
Query: 161    accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
              |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 129693 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 129752

                                        
Query: 218    ggctctgaccgtgtgctctacctcgg 243
              ||| | ||||| || |||||||||||
Sbjct: 129753 ggcgccgaccgcgtcctctacctcgg 129778
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>emb|X05823.1|TACAB1G5 Wheat Cab-1 gene 5' upstream region for chlorophyll a/b-binding
           protein
          Length = 929

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                   
Query: 1   atctccacacactcaagcctcattcttggagaacacacag 40
           ||||||||||||||||||| || | |||||||||||||||
Sbjct: 849 atctccacacactcaagccacactattggagaacacacag 888



 Score = 48.1 bits (24), Expect = 0.013
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 56  tgcagcgcaatggcggccaccacc 79
           ||||||||||||||||||||||||
Sbjct: 906 tgcagcgcaatggcggccaccacc 929
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>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full
           insert sequence
          Length = 1013

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 143 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 202

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 203 ggcgccgaccgcgtcctctacctcgg 228
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>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full
           insert sequence
          Length = 1021

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 148 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 207

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 208 ggcgccgaccgcgtcctctacctcgg 233
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>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full
           insert sequence
          Length = 1056

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 150 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 209

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 210 ggcgccgaccgcgtcctctacctcgg 235
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>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full
           insert sequence
          Length = 1235

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 148 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 207

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 208 ggcgccgaccgcgtcctctacctcgg 233
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>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full
           insert sequence
          Length = 1045

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 148 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 207

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 208 ggcgccgaccgcgtcctctacctcgg 233
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>emb|X07746.1|TACAB1UP Triticum aestivum Cab-1 gene upstream region
          Length = 1887

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 37/40 (92%)
 Strand = Plus / Minus

                                                  
Query: 1  atctccacacactcaagcctcattcttggagaacacacag 40
          ||||||||||||||||||| || | |||||||||||||||
Sbjct: 69 atctccacacactcaagccacactattggagaacacacag 30
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>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I
           light-harvesting chlorophyll a/b binding protein of
           photosystem II (LHCPII), complete cds
          Length = 1022

 Score = 56.0 bits (28), Expect = 5e-05
 Identities = 72/86 (83%), Gaps = 3/86 (3%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtt---tcgtcgggcagcccatggtac 217
           |||||||||||||| ||||||||| |||||| ||     |||||||| ||||| ||||||
Sbjct: 129 accatgcgcaagaccgccgcgaagcccaagccggcggcgtcgtcggggagcccgtggtac 188

                                     
Query: 218 ggctctgaccgtgtgctctacctcgg 243
           ||| | ||||| || |||||||||||
Sbjct: 189 ggcgccgaccgcgtcctctacctcgg 214
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>ref|NM_192636.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 789

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
           |||||||||||| | || |||||| ||||||  |   ||||||| ||||| |||||||||
Sbjct: 82  accatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggc 141

                                  
Query: 221 tctgaccgtgtgctctacctcgg 243
            | ||||| ||||||||||||||
Sbjct: 142 gccgaccgcgtgctctacctcgg 164
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                            
Query: 161      accatgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
                |||||||||||| | || |||||| ||||||  |   ||||||| ||||| |||||||||
Sbjct: 23603625 accatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggc 23603684

                                       
Query: 221      tctgaccgtgtgctctacctcgg 243
                 | ||||| ||||||||||||||
Sbjct: 23603685 gccgaccgcgtgctctacctcgg 23603707



 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                              
Query: 198      cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
                ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 30024468 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 30024513
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>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0518F01
          Length = 154541

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                         
Query: 161   accatgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
             |||||||||||| | || |||||| ||||||  |   ||||||| ||||| |||||||||
Sbjct: 66324 accatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggc 66383

                                    
Query: 221   tctgaccgtgtgctctacctcgg 243
              | ||||| ||||||||||||||
Sbjct: 66384 gccgaccgcgtgctctacctcgg 66406
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>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full
           insert sequence
          Length = 1180

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
           |||||||||||| | || |||||| ||||||  |   ||||||| ||||| |||||||||
Sbjct: 153 accatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggc 212

                                  
Query: 221 tctgaccgtgtgctctacctcgg 243
            | ||||| ||||||||||||||
Sbjct: 213 gccgaccgcgtgctctacctcgg 235
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>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full
           insert sequence
          Length = 1126

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 69/83 (83%)
 Strand = Plus / Plus

                                                                       
Query: 161 accatgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
           |||||||||||| | || |||||| ||||||  |   ||||||| ||||| |||||||||
Sbjct: 152 accatgcgcaagtcggcggcgaagcccaagcccgccgcgtcggggagcccgtggtacggc 211

                                  
Query: 221 tctgaccgtgtgctctacctcgg 243
            | ||||| ||||||||||||||
Sbjct: 212 gccgaccgcgtgctctacctcgg 234
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>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding
           protein
          Length = 1442

 Score = 54.0 bits (27), Expect = 2e-04
 Identities = 42/47 (89%)
 Strand = Plus / Plus

                                                          
Query: 197 tcgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           |||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 615 tcgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 661
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>ref|NM_191799.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 798

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 131 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 176
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>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase
             IV-1 gene, complete cds
          Length = 15000

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Minus

                                                           
Query: 198   cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
             ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 14543 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 14498
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>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0690B02
          Length = 153116

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                           
Query: 198   cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
             ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 20458 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 20503
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>gb|AF139467.2|AF139467 Vigna radiata LHCII type I chlorophyll a/b binding protein
           (CipLhcb1) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 975

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 186 ccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| || || ||||||||||||||| | ||||||||
Sbjct: 171 ccaagcaggtttcctccggaagcccatggtacggcccagaccgtgt 216
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>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein
           LHCP
          Length = 967

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 146 ggcgaggcacgtgtgaccatgcgcaagacagccgcgaaggccaagc 191
           |||||||| || ||||| ||||||||||| || |||||||||||||
Sbjct: 140 ggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagc 185



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                       
Query: 61  cgcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaa 120
           ||||||||||  || ||||||| | || |||||  || ||||||||||||||||| ||||
Sbjct: 61  cgcaatggcgagcagcaccatggccctctcctccacggccttcgccggcaaggccgtgaa 120
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>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full
           insert sequence
          Length = 1055

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 212 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 257
to top
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full
           insert sequence
          Length = 1055

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 212 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 257
to top
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full
           insert sequence
          Length = 1057

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 214 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 259
to top
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full
           insert sequence
          Length = 1057

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 214 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 259
to top
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA,
           complete cds
          Length = 1022

 Score = 52.0 bits (26), Expect = 8e-04
 Identities = 41/46 (89%)
 Strand = Plus / Plus

                                                         
Query: 198 cgtcgggcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 173 cgtcggggagcccgtggtacggcgccgaccgcgtgctctacctcgg 218
to top
>ref|NM_102733.2| Arabidopsis thaliana CAB1 (CHLOROPHYLL A/B BINDING PROTEIN 1);
           chlorophyll binding AT1G29930 (CAB1) mRNA, complete cds
          Length = 1044

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 205 ggcagcccatggtacggatctgaccgtgt 233
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>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein
           (CAB) mRNA, partial cds
          Length = 720

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 49/57 (85%)
 Strand = Plus / Plus

                                                                    
Query: 164 atgcgcaagacagccgcgaaggccaagcaggtttcgtcgggcagcccatggtacggc 220
           ||||||||||||||||  ||| |||||  ||| ||||| |||||||| |||||||||
Sbjct: 138 atgcgcaagacagccggcaagcccaagacggtctcgtccggcagcccgtggtacggc 194
to top
>gb|AY091169.1| Arabidopsis thaliana putative chlorophyll a/b-binding protein
           (At1g29930) mRNA, complete cds
          Length = 835

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 139 ggcagcccatggtacggatctgaccgtgt 167
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>gb|AY050935.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
           binding protein (At1g29930) mRNA, complete cds
          Length = 1014

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 205 ggcagcccatggtacggatctgaccgtgt 233
to top
>gb|AY058180.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
          Length = 1019

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 205 ggcagcccatggtacggatctgaccgtgt 233
to top
>gb|AF428359.1|AF428359 Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
          Length = 1045

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 205 ggcagcccatggtacggatctgaccgtgt 233
to top
>gb|AY045673.1| Arabidopsis thaliana At1g29930/F1N18_23 mRNA, complete cds
          Length = 999

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 205 ggcagcccatggtacggatctgaccgtgt 233
to top
>emb|BX815726.1|CNS0ACD7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS89ZA03 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 930

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 174 ggcagcccatggtacggatctgaccgtgt 202
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>emb|BX817619.1|CNS0AAVV Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL33ZA06 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 994

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 189 ggcagcccatggtacggatctgaccgtgt 217
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>gb|AC022455.5|AC022455 Arabidopsis thaliana chromosome 1 BAC T1P2 genomic sequence,
           complete sequence
          Length = 82053

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 85  ggcagcccatggtacggatctgaccgtgt 113
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>gb|AC008030.4|AC008030 Arabidopsis thaliana chromosome I BAC F1N18 genomic sequence, complete
             sequence
          Length = 101075

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Minus

                                          
Query: 203   ggcagcccatggtacggctctgaccgtgt 231
             ||||||||||||||||| |||||||||||
Sbjct: 16776 ggcagcccatggtacggatctgaccgtgt 16748
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>emb|X03909.1|ATLHCP3 A.thaliana gene (LHCP AB 140) for chlorophyll a/b binding protein
          Length = 1109

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 28/29 (96%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| |||||||||||
Sbjct: 356 ggcagcccatggtacggatctgaccgtgt 384
to top
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding
            protein
          Length = 2261

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 148  cgaggcacgtgtgaccatgcgcaagacagccgcgaaggccaagc 191
            |||||| || ||||| ||||||||||| || |||||||||||||
Sbjct: 1090 cgaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagc 1133



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 61   cgcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaa 120
            ||||||||||  || ||||||| | || |||||  || ||||||||||||||||| ||||
Sbjct: 1009 cgcaatggcgagcagcaccatggccctctcctccacggccttcgccggcaaggccgtgaa 1068
to top
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni
          Length = 312

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                   
Query: 204 gcagcccatggtacggctctgaccgtgtgctctacctcgg 243
           ||||||| ||||||||| | ||||| ||||||||||||||
Sbjct: 178 gcagcccgtggtacggccccgaccgcgtgctctacctcgg 217
to top
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding
           protein
          Length = 869

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 80/98 (81%), Gaps = 3/98 (3%)
 Strand = Plus / Plus

                                                                       
Query: 146 ggcgaggcacgtgtgaccatgcgcaagacagccgcgaaggccaagcaggtttcg---tcg 202
           |||||||| || ||||| ||||||||||| || |||||||| |||| ||   ||   || 
Sbjct: 88  ggcgaggcccgcgtgacgatgcgcaagacggcggcgaaggcaaagccggcggcgagctcc 147

                                                 
Query: 203 ggcagcccatggtacggctctgaccgtgtgctctacct 240
           |||||||| ||||||||| | ||||| |||||||||||
Sbjct: 148 ggcagcccgtggtacggccccgaccgcgtgctctacct 185
to top
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence
          Length = 2262

 Score = 48.1 bits (24), Expect = 0.013
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                        
Query: 148  cgaggcacgtgtgaccatgcgcaagacagccgcgaaggccaagc 191
            |||||| || ||||| ||||||||||| || |||||||||||||
Sbjct: 1090 cgaggcccgcgtgacgatgcgcaagacggcggcgaaggccaagc 1133



 Score = 40.1 bits (20), Expect = 3.1
 Identities = 50/60 (83%)
 Strand = Plus / Plus

                                                                        
Query: 61   cgcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccctgaa 120
            ||||||||||  || ||||||| | || |||||  || ||||||||||||||||| ||||
Sbjct: 1009 cgcaatggcgagcagcaccatggccctctcctccacggccttcgccggcaaggccgtgaa 1068
to top
>emb|BX817733.1|CNS0AE6W Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL39ZE11 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 327

 Score = 46.1 bits (23), Expect = 0.051
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 203 ggcagcccatggtacggctctgaccgt 229
           ||||||||||||||||| |||||||||
Sbjct: 197 ggcagcccatggtacggatctgaccgt 223
to top
>ref|NM_001036402.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant
            AT2G34410.3 mRNA, complete cds
          Length = 3299

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 203  ggcagcccatggtacggctctgaccg 228
            ||||||||||||||||| ||||||||
Sbjct: 3111 ggcagcccatggtacggatctgaccg 3086
to top
>ref|NM_001036401.1| Arabidopsis thaliana O-acetyltransferase AT2G34410 transcript variant
            AT2G34410.2 mRNA, complete cds
          Length = 3338

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                      
Query: 203  ggcagcccatggtacggctctgaccg 228
            ||||||||||||||||| ||||||||
Sbjct: 3150 ggcagcccatggtacggatctgaccg 3125
to top
>ref|NM_128994.2| Arabidopsis thaliana LHB1B2; chlorophyll binding AT2G34420 (LHB1B2)
           transcript variant AT2G34420.1 mRNA, complete cds
          Length = 1354

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 188 ggcagcccatggtacggatctgaccg 213
to top
>ref|NM_179900.1| Arabidopsis thaliana LHB1B2 AT2G34420 (LHB1B2) transcript variant
           AT2G34420.2 mRNA, complete cds
          Length = 1312

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 188 ggcagcccatggtacggatctgaccg 213
to top
>gb|AY142513.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
           binding protein (At2g34420) mRNA, complete cds
          Length = 829

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 133 ggcagcccatggtacggatctgaccg 158
to top
>gb|AY045806.1| Arabidopsis thaliana putative photosystem II type I chlorophyll a/b
           binding protein (At2g34420) mRNA, complete cds
          Length = 1015

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 188 ggcagcccatggtacggatctgaccg 213
to top
>gb|AC004481.3| Arabidopsis thaliana chromosome 2 clone F13P17 map ve016, complete
             sequence
          Length = 112763

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                       
Query: 203   ggcagcccatggtacggctctgaccg 228
             ||||||||||||||||| ||||||||
Sbjct: 93868 ggcagcccatggtacggatctgaccg 93843
to top
>gb|AC004077.3| Arabidopsis thaliana chromosome 2 clone T31E10 map ve016, complete
             sequence
          Length = 93060

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                       
Query: 203   ggcagcccatggtacggctctgaccg 228
             ||||||||||||||||| ||||||||
Sbjct: 80334 ggcagcccatggtacggatctgaccg 80359
to top
>gb|AY081587.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding
           protein (At2g34420) mRNA, complete cds
          Length = 883

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 133 ggcagcccatggtacggatctgaccg 158
to top
>gb|AY079110.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 798

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 133 ggcagcccatggtacggatctgaccg 158
to top
>gb|AY079101.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 798

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 133 ggcagcccatggtacggatctgaccg 158
to top
>gb|AY065125.1| Arabidopsis thaliana photosystem II type I chlorophyll a/b binding
           protein (At2g34420; T31E10.24) mRNA, complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>gb|AF419587.1|AF419587 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>gb|AF419548.1|AF419548 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>gb|AF428397.1|AF428397 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 1024

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>gb|AY039561.1| Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 995

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>gb|AF372886.1|AF372886 Arabidopsis thaliana At2g34420/T31E10.24 mRNA, complete cds
          Length = 969

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 184 ggcagcccatggtacggatctgaccg 209
to top
>emb|BX814757.1|CNS0AEAM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB92ZG04 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 409

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 285 ggcagcccatggtacggatctgaccg 260
to top
>emb|BX821505.1|CNS0A93G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL46ZF04 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 959

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 175 ggcagcccatggtacggatctgaccg 200
to top
>emb|BX820019.1|CNS0A9C1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS62ZC05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 903

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 165 ggcagcccatggtacggatctgaccg 190
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>emb|BX820007.1|CNS0A9CM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS5ZF09 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 885

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 168 ggcagcccatggtacggatctgaccg 193
to top
>emb|BX821638.1|CNS0A92F Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL5ZG08 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 911

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 168 ggcagcccatggtacggatctgaccg 193
to top
>emb|BX822910.1|CNS0A63G Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB71ZG07 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 919

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 751 ggcagcccatggtacggatctgaccg 726
to top
>emb|X64460.1|ATLH1B2 A.thaliana Lhb1B2 gene for photosystem II chlorophyll a/b binding
           protein
          Length = 1405

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 203 ggcagcccatggtacggctctgaccg 228
           ||||||||||||||||| ||||||||
Sbjct: 433 ggcagcccatggtacggatctgaccg 458
to top
>dbj|D78207.1|PHNCABBP Japanese morning glory mRNA for chlorophyl a/b binding protein,
           partial cds
          Length = 247

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 34/38 (89%)
 Strand = Plus / Plus

                                                 
Query: 194 gtttcgtcgggcagcccatggtacggctctgaccgtgt 231
           ||||| || |||||||||||||||||| | ||||||||
Sbjct: 176 gtttcttccggcagcccatggtacggcccagaccgtgt 213
to top
>dbj|AB012641.1| Nicotiana sylvestris Lhcb1*9 gene for light harvesting chlorophyll
            a/b-binding protein, complete cds
          Length = 3386

 Score = 44.1 bits (22), Expect = 0.20
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 182  aaggccaagcaggtttcgtcgggcagcccatggtacggctctgaccgtgt 231
            ||||||||||  || || || ||||| |||||||||||| ||||||||||
Sbjct: 1571 aaggccaagcctgtctcttctggcagtccatggtacggccctgaccgtgt 1620
to top
>gb|AC122920.4| Mus musculus BAC clone RP23-33J11 from chromosome 8, complete sequence
          Length = 229472

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 83     tctctttcctcttcgtccttc 103
              |||||||||||||||||||||
Sbjct: 102640 tctctttcctcttcgtccttc 102620
to top
>gb|AF220527.1|AF220527 Euphorbia esula chlorophyll a/b binding protein precursor, mRNA,
           complete cds
          Length = 927

 Score = 42.1 bits (21), Expect = 0.79
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                        
Query: 203 ggcagcccatggtacggctctgaccgtgt 231
           |||||||||||||||||| | ||||||||
Sbjct: 145 ggcagcccatggtacggcccagaccgtgt 173
to top
>gb|AC163617.5| Mus musculus BAC clone RP23-115O21 from chromosome 8, complete sequence
          Length = 224322

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 115    cctgaagaacttgccctcgc 134
              ||||||||||||||||||||
Sbjct: 106454 cctgaagaacttgccctcgc 106435
to top
>ref|XM_509787.1| PREDICTED: Pan troglodytes similar to DEAD/H (Asp-Glu-Ala-Asp/His)
           box polypeptide 26; DEAD box protein; deleted in cancer
           1; RNA helicase HDB/DICE1; RNA helicase HDB (LOC452729),
           mRNA
          Length = 2631

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 492 cattcttggagaacacacag 473
to top
>gb|BT014208.1| Lycopersicon esculentum clone 133385R, mRNA sequence
          Length = 958

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 181 gcagcccatggtatggccctgaccgtgt 208
to top
>gb|BC012677.1| Mus musculus sulfotransferase family 5A, member 1, mRNA (cDNA clone
           MGC:13878 IMAGE:4187578), complete cds
          Length = 1174

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 cctgaagaacttgccctcgc 134
           ||||||||||||||||||||
Sbjct: 852 cctgaagaacttgccctcgc 833
to top
>gb|AC121819.3| Mus musculus BAC clone RP23-460F21 from chromosome 8, complete sequence
          Length = 194109

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 115    cctgaagaacttgccctcgc 134
              ||||||||||||||||||||
Sbjct: 193963 cctgaagaacttgccctcgc 193982
to top
>gb|AC006972.2| Homo sapiens PAC clone RP4-799O8 from 7, complete sequence
          Length = 171537

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cattcttggagaacacacag 40
             ||||||||||||||||||||
Sbjct: 37665 cattcttggagaacacacag 37684
to top
>gb|BC039829.1| Homo sapiens integrator complex subunit 6, transcript variant 1, mRNA
            (cDNA clone MGC:48751 IMAGE:5736353), complete cds
          Length = 3692

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1133 cattcttggagaacacacag 1114
to top
>gb|BC013358.2| Homo sapiens integrator complex subunit 6, mRNA (cDNA clone
            IMAGE:3630405), partial cds
          Length = 2975

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1137 cattcttggagaacacacag 1118
to top
>gb|BC094745.1| Homo sapiens integrator complex subunit 6, mRNA (cDNA clone
            IMAGE:5272649), with apparent retained intron
          Length = 3768

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1195 cattcttggagaacacacag 1176
to top
>emb|AL137780.10| Human DNA sequence from clone RP11-24B19 on chromosome 13q14.2-14.3
             Contains a protease inhibitor pseudogene and the 3' end of
             the DDX26 gene for DEAD/H (Asp-Glu-Ala-Asp/His) box
             polypeptide 26 (HDB, DBI-1, DICE1, NOTCHL2,Notchl2,
             DKFZP434B105), complete sequence
          Length = 110515

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cattcttggagaacacacag 40
             ||||||||||||||||||||
Sbjct: 87439 cattcttggagaacacacag 87458
to top
>gb|AC183284.3| Pan troglodytes BAC clone CH251-413D13 from chromosome 7, complete
            sequence
          Length = 171441

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 4482 cattcttggagaacacacag 4463
to top
>gb|AC116099.2| Homo sapiens chromosome 1 clone RP11-338F23, complete sequence
          Length = 184007

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 21    cattcttggagaacacacag 40
             ||||||||||||||||||||
Sbjct: 38988 cattcttggagaacacacag 39007
to top
>ref|NM_001039937.1| Homo sapiens integrator complex subunit 6 (INTS6), transcript
           variant 2, mRNA
          Length = 6973

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 767 cattcttggagaacacacag 748
to top
>ref|NM_012141.2| Homo sapiens integrator complex subunit 6 (INTS6), transcript variant
            1, mRNA
          Length = 7465

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1259 cattcttggagaacacacag 1240
to top
>dbj|AK128795.1| Homo sapiens cDNA FLJ45485 fis, clone BRTHA2002661, highly  similar
           to Homo sapiens DEAD/H (Asp-Glu-Ala-Asp/His) box
           polypeptide 26 (DDX26)
          Length = 3970

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 414 cattcttggagaacacacag 395
to top
>dbj|AK096696.1| Homo sapiens cDNA FLJ39377 fis, clone PERIC2000180, highly similar
           to Homo sapiens candidate tumor suppressor protein DICE1
           mRNA
          Length = 3022

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 479 cattcttggagaacacacag 460
to top
>dbj|AK074946.1| Homo sapiens cDNA FLJ90465 fis, clone NT2RP3002286, highly similar
           to Homo sapiens candidate tumor suppressor protein DICE1
           mRNA
          Length = 2718

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 349 cattcttggagaacacacag 330
to top
>gb|AE011666.1| Xanthomonas axonopodis pv. citri str. 306,  section 44 of 469 of the
            complete genome
          Length = 13551

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 61   cgcaatggcggccaccacca 80
            ||||||||||||||||||||
Sbjct: 2141 cgcaatggcggccaccacca 2160
to top
>gb|AF499777.1| Xanthomonas axonopodis pv. glycines strain 8ra hrp pathogenicity
             island, complete sequence
          Length = 29206

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 61    cgcaatggcggccaccacca 80
             ||||||||||||||||||||
Sbjct: 18368 cgcaatggcggccaccacca 18349
to top
>ref|NM_165664.1| Drosophila melanogaster CG8026-RA, transcript variant A (CG8026),
            mRNA
          Length = 2057

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  agacagccgcgaaggccaag 190
            ||||||||||||||||||||
Sbjct: 1363 agacagccgcgaaggccaag 1344
to top
>ref|NM_136624.2| Drosophila melanogaster CG8026-RB, transcript variant B (CG8026),
            mRNA
          Length = 2934

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  agacagccgcgaaggccaag 190
            ||||||||||||||||||||
Sbjct: 1363 agacagccgcgaaggccaag 1344
to top
>dbj|AK131654.1| Mus musculus adult male cerebellum cDNA, RIKEN full-length enriched
            library, clone:1520403K13 product:unclassifiable, full
            insert sequence
          Length = 3812

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 18   cctcattcttggagaacaca 37
            ||||||||||||||||||||
Sbjct: 1927 cctcattcttggagaacaca 1946
to top
>dbj|AK142243.1| Mus musculus 13 days embryo heart cDNA, RIKEN full-length enriched
           library, clone:D330020C04 product:sulfotransferase
           family 5A, member 1, full insert sequence
          Length = 1065

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 cctgaagaacttgccctcgc 134
           ||||||||||||||||||||
Sbjct: 762 cctgaagaacttgccctcgc 743
to top
>dbj|AK164155.1| Mus musculus adult male hippocampus cDNA, RIKEN full-length
           enriched library, clone:C630020H04
           product:sulfotransferase family 5A, member 1, full
           insert sequence
          Length = 3143

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 115 cctgaagaacttgccctcgc 134
           ||||||||||||||||||||
Sbjct: 184 cctgaagaacttgccctcgc 165
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>gb|AY060332.1| Drosophila melanogaster GH22139 full length cDNA
          Length = 2962

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 171  agacagccgcgaaggccaag 190
            ||||||||||||||||||||
Sbjct: 1363 agacagccgcgaaggccaag 1344
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>tpg|BK005730.1| TPA: TPA_exp: Homo sapiens integrator complex subunit 6 mRNA,
            complete cds
          Length = 3690

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1121 cattcttggagaacacacag 1102
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>gb|AC008186.5|AC008186 Drosophila melanogaster, chromosome 2R, region 45A-46A, BAC clone
              BACR10M14, complete sequence
          Length = 189757

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    agacagccgcgaaggccaag 190
              ||||||||||||||||||||
Sbjct: 115937 agacagccgcgaaggccaag 115956
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>gb|AF279249.1|AF279249 Vigna radiata LHCII type I chlorophyll a/b-binding protein
           (CipLhcb1*2) mRNA, complete cds; nuclear gene for
           chloroplast product
          Length = 932

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 35/40 (87%)
 Strand = Plus / Plus

                                                   
Query: 193 ggtttcgtcgggcagcccatggtacggctctgaccgtgtg 232
           |||||| || || ||||||||||||||| | |||||||||
Sbjct: 179 ggtttcctctggaagcccatggtacggcccagaccgtgtg 218
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>emb|X52743.1|NTCAB21 Tabacco Cab21 mRNA for major chlorophyll a/b binding protein
          Length = 953

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| | ||||||||
Sbjct: 199 gcagcccatggtacggcccagaccgtgt 226
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>gb|AC006384.2|AC006384 Homo sapiens BAC clone RP11-557I6 from 7q11.23-q21.1, complete sequence
          Length = 128959

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    cattcttggagaacacacag 40
             ||||||||||||||||||||
Sbjct: 96201 cattcttggagaacacacag 96182
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>gb|AF097645.1|AF097645 Homo sapiens candidate tumor suppressor protein DICE1 mRNA, complete
            cds
          Length = 3690

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 21   cattcttggagaacacacag 40
            ||||||||||||||||||||
Sbjct: 1121 cattcttggagaacacacag 1102
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>emb|AL772314.9| Zebrafish DNA sequence from clone DKEY-89B17 in linkage group 19,
              complete sequence
          Length = 185640

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 116    ctgaagaacttgccctcgcc 135
              ||||||||||||||||||||
Sbjct: 171753 ctgaagaacttgccctcgcc 171734
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>gb|AF160974.1|AF160974 Xanthomonas campestris pv. glycines HrcU homolog, HrcV homolog, HpaP
            homolog, HrcQ homolog, HrcR homolog, and HrcS homolog
            genes, complete cds
          Length = 6125

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 61   cgcaatggcggccaccacca 80
            ||||||||||||||||||||
Sbjct: 5636 cgcaatggcggccaccacca 5617
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>gb|AE003834.3| Drosophila melanogaster chromosome 2R, section 16 of 73 of the complete
              sequence
          Length = 243313

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 171    agacagccgcgaaggccaag 190
              ||||||||||||||||||||
Sbjct: 122779 agacagccgcgaaggccaag 122798
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>emb|AL833524.1|HSM804837 Homo sapiens mRNA; cDNA DKFZp686I1337 (from clone DKFZp686I1337)
          Length = 3398

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 21  cattcttggagaacacacag 40
           ||||||||||||||||||||
Sbjct: 835 cattcttggagaacacacag 816
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>gb|U21114.1|STU21114 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-5) gene,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 798

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 137 gcagcccatggtatggccctgaccgtgt 164
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>gb|U21112.1|STU21112 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-3 gene,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 798

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 137 gcagcccatggtatggccctgaccgtgt 164
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>gb|U21111.1|STU21111 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-1) gene,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 798

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 137 gcagcccatggtatggccctgaccgtgt 164
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>gb|U20983.1|STU20983 Solanum tuberosum chlorophyll a/b binding protein (Lhcb1-2) gene,
           nuclear gene encoding chloroplast protein, complete cds
          Length = 798

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 137 gcagcccatggtatggccctgaccgtgt 164
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>emb|X14341.1|SOCABP S.oleracea chloroplast mRNA for chlorophyll a/b binding protein
          Length = 980

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||||||| | ||||||||
Sbjct: 192 gcagcccatggtacggcccagaccgtgt 219
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>gb|AC165249.2| Mus musculus BAC clone RP24-157P13 from chromosome 12, complete sequence
          Length = 193902

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 18     cctcattcttggagaacaca 37
              ||||||||||||||||||||
Sbjct: 131441 cctcattcttggagaacaca 131460
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>gb|M14443.1|TOMCBPA Tomato chlorophyll a/b-binding protein gene Cab-1B, complete cds
          Length = 1253

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 204 gcagcccatggtacggctctgaccgtgt 231
           ||||||||||||| ||| ||||||||||
Sbjct: 327 gcagcccatggtatggccctgaccgtgt 354
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>dbj|AB012637.1| Nicotiana sylvestris Lhcb1*2, Lhcb1*3, Lhcb1*4 genes for light
            harvesting chlorophyll a/b-binding protein, complete cds
          Length = 7965

 Score = 40.1 bits (20), Expect = 3.1
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 204  gcagcccatggtacggctctgaccgtgt 231
            ||||||||||||||||| | ||||||||
Sbjct: 7011 gcagcccatggtacggcccagaccgtgt 7038


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,762,781
Number of Sequences: 3902068
Number of extensions: 1762781
Number of successful extensions: 34958
Number of sequences better than 10.0: 123
Number of HSP's better than 10.0 without gapping: 124
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 34771
Number of HSP's gapped (non-prelim): 182
length of query: 243
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 221
effective length of database: 17,147,199,772
effective search space: 3789531149612
effective search space used: 3789531149612
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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