ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81a06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1) 70 1e-12
2RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC ... 70 1e-12
3RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC ... 65 5e-11
4RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1) 64 1e-10
5RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1) 35 0.055
6RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (St... 33 0.16
7RNS3_PETHY (Q40875) Ribonuclease S-3 precursor (EC 3.1.27.1) (St... 32 0.61
8RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC) 31 1.0
9RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy) 30 1.3
10RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RN... 30 2.3
11CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31... 29 3.0

>RNS1_ARATH (P42813) Ribonuclease 1 precursor (EC 3.1.27.1)|
          Length = 230

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 26/35 (74%), Positives = 32/35 (91%)
 Frame = +1

Query: 82  EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDF 186
           E+FDFFY VQQWPGS+CDT+K CC+P++GKPA DF
Sbjct: 28  EDFDFFYFVQQWPGSYCDTQKKCCYPNSGKPAADF 62



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>RNLE_LYCES (P80022) Extracellular ribonuclease LE precursor (EC 3.1.27.1)|
           (RNase LE)
          Length = 230

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 26/35 (74%), Positives = 31/35 (88%)
 Frame = +1

Query: 82  EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDF 186
           ++FDFFY VQQWPGS+CDTK+ CC+P TGKPA DF
Sbjct: 27  KDFDFFYFVQQWPGSYCDTKQSCCYPTTGKPAADF 61



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>RNLX_LYCES (P80196) Intracellular ribonuclease LX precursor (EC 3.1.27.1)|
           (RNase LX)
          Length = 237

 Score = 65.1 bits (157), Expect = 5e-11
 Identities = 23/35 (65%), Positives = 29/35 (82%)
 Frame = +1

Query: 82  EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDF 186
           ++FDFFY VQQWP S+CDT++ CC+P TGKP  DF
Sbjct: 26  QDFDFFYFVQQWPASYCDTRRSCCYPTTGKPDEDF 60



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>RNS3_ARATH (P42815) Ribonuclease 3 precursor (EC 3.1.27.1)|
          Length = 222

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 22/35 (62%), Positives = 29/35 (82%)
 Frame = +1

Query: 82  EEFDFFYLVQQWPGSFCDTKKGCCFPDTGKPATDF 186
           ++FDFFY V QWPG++CD++  CC+P TGKPA DF
Sbjct: 20  QDFDFFYFVLQWPGAYCDSRHSCCYPQTGKPAADF 54



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>RNS2_ARATH (P42814) Ribonuclease 2 precursor (EC 3.1.27.1)|
          Length = 259

 Score = 35.0 bits (79), Expect = 0.055
 Identities = 12/23 (52%), Positives = 16/23 (69%)
 Frame = +1

Query: 85  EFDFFYLVQQWPGSFCDTKKGCC 153
           EFD+F L  QWPG++C   + CC
Sbjct: 31  EFDYFALSLQWPGTYCRGTRHCC 53



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>RNS2_ANTHI (Q38716) Ribonuclease S-2 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 2) (S2-RNase)
          Length = 235

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 15/31 (48%), Positives = 19/31 (61%)
 Frame = +1

Query: 85  EFDFFYLVQQWPGSFCDTKKGCCFPDTGKPA 177
           +FD+F LV QWP S+C  K   C P T  P+
Sbjct: 32  QFDYFKLVLQWPNSYCSLKTTHC-PRTRLPS 61



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>RNS3_PETHY (Q40875) Ribonuclease S-3 precursor (EC 3.1.27.1) (Stylar|
           glycoprotein 3) (S3-RNase)
          Length = 222

 Score = 31.6 bits (70), Expect = 0.61
 Identities = 12/21 (57%), Positives = 13/21 (61%)
 Frame = +1

Query: 88  FDFFYLVQQWPGSFCDTKKGC 150
           FD+F LV  WP SFC  K  C
Sbjct: 24  FDYFQLVLTWPASFCYPKNKC 44



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>RNMC_MOMCH (P23540) Ribonuclease MC (EC 3.1.27.1) (RNase MC)|
          Length = 191

 Score = 30.8 bits (68), Expect = 1.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = +1

Query: 88  FDFFYLVQQWPGSFCDTKKGCCFPDTG 168
           FD F+ VQQWP + C  +K    P +G
Sbjct: 1   FDSFWFVQQWPPAVCSFQKSGSCPGSG 27



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>RNOY_CRAGI (Q7M456) Ribonuclease Oy (EC 3.1.27.-) (RNase Oy)|
          Length = 213

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = +1

Query: 82  EEFDFFYLVQQWPGSFCDTKKGCCFPDT 165
           +++++F   QQWP + C   K C  PD+
Sbjct: 1   KDWNYFTFAQQWPIAVCAEHKSCFIPDS 28



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>RNDI_DICDI (Q7M438) Ribonuclease DdI precursor (EC 3.1.27.1) (RNase DdI)|
          Length = 223

 Score = 29.6 bits (65), Expect = 2.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = +1

Query: 85  EFDFFYLVQQWPGSFCDTK 141
           +FDF+  VQQW  S+CD++
Sbjct: 31  DFDFYLFVQQWIYSYCDSQ 49



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>CAPP_RALSO (Q8XWW2) Phosphoenolpyruvate carboxylase (EC 4.1.1.31) (PEPCase)|
           (PEPC)
          Length = 985

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 11/18 (61%), Positives = 15/18 (83%)
 Frame = +3

Query: 9   LTGQDEARRALGPAPAFS 62
           LTG+D  R A+GPAPA++
Sbjct: 399 LTGEDAGRHAVGPAPAYT 416


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,364,630
Number of Sequences: 219361
Number of extensions: 288192
Number of successful extensions: 1068
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1068
length of database: 80,573,946
effective HSP length: 37
effective length of database: 72,457,589
effective search space used: 1738982136
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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