ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet81a01
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 27 0.40
2SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 27 0.40
3ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disint... 29 3.8
4RS13_THEVO (Q97B96) 30S ribosomal protein S13P 28 4.9
5SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (P... 28 4.9
6SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu... 28 6.4
7CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (E... 28 6.4
8CCNL1_CHICK (Q5ZJP9) Cyclin-L1 28 6.4
9FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment) 28 8.4
10ZBT34_HUMAN (Q8NCN2) Zinc finger and BTB domain-containing prote... 28 8.4

>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.6 bits (57), Expect(2) = 0.40
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 217 VTHSLADFDFHDHRP 173
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245



 Score = 24.3 bits (51), Expect(2) = 0.40
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 74  LPKMAHLEHPIPWHGSPKQPSHP 6
           LP  +HL  P+   G P++PS P
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278



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>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.6 bits (57), Expect(2) = 0.40
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -3

Query: 217 VTHSLADFDFHDHRP 173
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245



 Score = 24.3 bits (51), Expect(2) = 0.40
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -2

Query: 74  LPKMAHLEHPIPWHGSPKQPSHP 6
           LP  +HL  P+   G P++PS P
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278



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>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +3

Query: 117  CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 221
            C     PRTHK C S +     SWK+   KEC  T
Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483



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>RS13_THEVO (Q97B96) 30S ribosomal protein S13P|
          Length = 171

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +1

Query: 91  GMNRKPGYGAQLRANLEPTKGVGRLRQQD 177
           G+  + GY    R NL+PTK +G L++ +
Sbjct: 54  GIGLRLGYAIAERLNLQPTKKIGELKEDE 82



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>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer|
            of yellow 3)
          Length = 2006

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +3

Query: 90   RDEPEAGLRCPTAR*PRTHKGCWSI--KTAGR---WSWKSKSAKECV 215
            RD PEA +RC T R  R H  C  +  +  GR   ++W+    K C+
Sbjct: 1707 RDMPEAFIRCYTCR-KRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCI 1752



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>SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 560

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = -3

Query: 217 VTHSLADFDFHDHRPA-------VLIDQHP 149
           +THSL   +F DHRP        + I+ HP
Sbjct: 227 ITHSLCSLEFEDHRPLYDWVLDNISIEHHP 256



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>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase) (PAPS
           sulfotransferase)
          Length = 244

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +3

Query: 171 AGRWSWKSKSAKEC 212
           AGRW W+ K++KEC
Sbjct: 227 AGRWWWEDKNSKEC 240



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>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +2

Query: 11  GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 121
           GSAA+V+ A   G P+GP     T  A  TGS   VP
Sbjct: 6   GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41



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>FINC_PLEWA (Q91289) Fibronectin (FN) (Fragment)|
          Length = 1328

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +1

Query: 40   GIGCSKWAIFGKQNWRCGMNRKPGYG 117
            G  CS     G+Q WRC   R+PG G
Sbjct: 1265 GAICSCTCYGGQQGWRCDNCRRPGAG 1290



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>ZBT34_HUMAN (Q8NCN2) Zinc finger and BTB domain-containing protein 34|
          Length = 500

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/42 (35%), Positives = 20/42 (47%)
 Frame = +1

Query: 88  CGMNRKPGYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV 213
           C   R+P   + LR    P+K + R R Q+ GH  R    SV
Sbjct: 168 CSQGRQPTASSDLRMETTPSKAL-RSRLQEEGHSDRGSSGSV 208


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,894,751
Number of Sequences: 219361
Number of extensions: 707332
Number of successful extensions: 2023
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2022
length of database: 80,573,946
effective HSP length: 50
effective length of database: 69,605,896
effective search space used: 1670541504
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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