ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet80f04 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK119785.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-F07, full insert sequence Length = 1397 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 200 ctcggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaac 259 |||||||||||| | ||||||||||||| || | | ||| ||||| ||||| | ||||| Sbjct: 263 ctcggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaac 322 Query: 260 gatctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 ||| | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 323 gatttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 372
>dbj|AK101542.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I01, full insert sequence Length = 1211 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 200 ctcggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaac 259 |||||||||||| | ||||||||||||| || | | ||| ||||| ||||| | ||||| Sbjct: 211 ctcggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaac 270 Query: 260 gatctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 ||| | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 271 gatttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 320
>dbj|AK101540.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048H01, full insert sequence Length = 1211 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 200 ctcggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaac 259 |||||||||||| | ||||||||||||| || | | ||| ||||| ||||| | ||||| Sbjct: 211 ctcggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaac 270 Query: 260 gatctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 ||| | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 271 gatttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 320
>dbj|AK068655.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013158J05, full insert sequence Length = 1378 Score = 67.9 bits (34), Expect = 2e-08 Identities = 91/110 (82%) Strand = Plus / Plus Query: 200 ctcggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaac 259 |||||||||||| | ||||||||||||| || | | ||| ||||| ||||| | ||||| Sbjct: 243 ctcggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaac 302 Query: 260 gatctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 ||| | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 303 gatttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 352
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 203 ggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaacgat 262 ||||||||| | ||||||||||||| || | | ||| ||||| ||||| | |||||||| Sbjct: 14979659 ggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgat 14979600 Query: 263 ctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 14979599 ttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 14979553 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 38621289 gccgccgccgcctccgccct 38621270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 |||||| ||||||||||||||||| Sbjct: 26465781 cgccgctcggccgtcgccgccgcc 26465804 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 22944321 gccgccgccgcctccgccct 22944340
>dbj|AP008247.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0784G04 Length = 157458 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 203 ggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaacgat 262 ||||||||| | ||||||||||||| || | | ||| ||||| ||||| | |||||||| Sbjct: 16950 ggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgat 16891 Query: 263 ctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 16890 ttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 16844
>dbj|AP008246.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1642C07 Length = 206004 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 203 ggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaacgat 262 ||||||||| | ||||||||||||| || | | ||| ||||| ||||| | |||||||| Sbjct: 202877 ggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgat 202818 Query: 263 ctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 202817 ttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 202771
>dbj|AP006530.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1329D01 Length = 141938 Score = 61.9 bits (31), Expect = 1e-06 Identities = 88/107 (82%) Strand = Plus / Minus Query: 203 ggggtgtctaacgatacaggggtcatgacgcccggcgccgacgttgttacccagaacgat 262 ||||||||| | ||||||||||||| || | | ||| ||||| ||||| | |||||||| Sbjct: 5906 ggggtgtctgatgatacaggggtcaagatggctggctccgacattgttggcaagaacgat 5847 Query: 263 ctactgatcgtcggcccaggtgtgcttggccggctggtagctgagaa 309 | ||||| || ||||| || |||||||| || |||||||||||||| Sbjct: 5846 ttgctgattgttggccctggagtgcttggtcgactggtagctgagaa 5800
>ref|XM_368353.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00891.4) partial mRNA Length = 2163 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Plus Query: 37 ggatgccgccgccgcctccgccc 59 ||||||||||||||||||||||| Sbjct: 123 ggatgccgccgccgcctccgccc 145
>ref|XM_868950.1| PREDICTED: Bos taurus hypothetical protein LOC616835 (LOC616835), mRNA Length = 693 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Minus Query: 169 cccccgccgcgcggccgtcgccgccgc 195 ||||||||||||||||| ||||||||| Sbjct: 563 cccccgccgcgcggccgccgccgccgc 537
>gb|AC119675.2| Homo sapiens chromosome 1 clone RP4-731G4, complete sequence Length = 138939 Score = 46.1 bits (23), Expect = 0.066 Identities = 26/27 (96%) Strand = Plus / Plus Query: 105 ctgcctcccgcccctcctccgtcagac 131 |||||||||||||||||||| |||||| Sbjct: 120712 ctgcctcccgcccctcctccatcagac 120738
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 46.1 bits (23), Expect = 0.066 Identities = 29/31 (93%) Strand = Plus / Plus Query: 163 ctccctcccccgccgcgcggccgtcgccgcc 193 |||||||| ||||||||| |||||||||||| Sbjct: 5553517 ctccctcctccgccgcgccgccgtcgccgcc 5553547 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cgcggccgtcgccgccgcctccctc 202 |||||||| |||||||||||||||| Sbjct: 22333287 cgcggccgccgccgccgcctccctc 22333263 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 tgccgccgccgcctccgccct 60 ||||||||||||||||||||| Sbjct: 21704986 tgccgccgccgcctccgccct 21704966 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ccagctcggcccctctccctccccc 173 |||||||||||| |||||||||||| Sbjct: 10631901 ccagctcggcccatctccctccccc 10631925 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gcggccgtcgccgccgcctccctc 202 ||||||| |||||||||||||||| Sbjct: 1974088 gcggccggcgccgccgcctccctc 1974065
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 46.1 bits (23), Expect = 0.066 Identities = 23/23 (100%) Strand = Plus / Minus Query: 172 ccgccgcgcggccgtcgccgccg 194 ||||||||||||||||||||||| Sbjct: 50177 ccgccgcgcggccgtcgccgccg 50155
>dbj|AP005171.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0081K20 Length = 117287 Score = 46.1 bits (23), Expect = 0.066 Identities = 29/31 (93%) Strand = Plus / Plus Query: 163 ctccctcccccgccgcgcggccgtcgccgcc 193 |||||||| ||||||||| |||||||||||| Sbjct: 66602 ctccctcctccgccgcgccgccgtcgccgcc 66632
>dbj|AP004273.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0431A02 Length = 165038 Score = 46.1 bits (23), Expect = 0.066 Identities = 29/31 (93%) Strand = Plus / Plus Query: 163 ctccctcccccgccgcgcggccgtcgccgcc 193 |||||||| ||||||||| |||||||||||| Sbjct: 15209 ctccctcctccgccgcgccgccgtcgccgcc 15239
>gb|AC025105.10| Homo sapiens chromosome 18, clone RP11-695P1, complete sequence Length = 201027 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 174 gccgcgcggccgtcgccgccgcctcc 199 |||||||||||| ||||||||||||| Sbjct: 93994 gccgcgcggccgccgccgccgcctcc 94019
>gb|AE016817.2| Ashbya gossypii (= Eremothecium gossypii) ATCC 10895 chromosome IV, complete sequence Length = 1466886 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 171 cccgccgcgcggccgtcgccgccgcc 196 ||||||||||||||| |||||||||| Sbjct: 813467 cccgccgcgcggccgccgccgccgcc 813442
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gctcggcccctctccctccccc 173 |||||||||||||||||||||| Sbjct: 25175117 gctcggcccctctccctccccc 25175138 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 ccgcgcggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||| |||||| Sbjct: 25152531 ccgcgccgccgtcgccgccgccgccctcg 25152503 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ccccgccgcgcggccgtcgcc 190 ||||||||||||||||||||| Sbjct: 16296179 ccccgccgcgcggccgtcgcc 16296199 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 11103332 cggccgtcgccgccgcctccc 11103352 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 5426726 cgcgcggccgtcgccgccgcc 5426706
>dbj|AP005816.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1168A08 Length = 138135 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gctcggcccctctccctccccc 173 |||||||||||||||||||||| Sbjct: 40240 gctcggcccctctccctccccc 40261 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 ccgcgcggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||| |||||| Sbjct: 17654 ccgcgccgccgtcgccgccgccgccctcg 17626
>dbj|AP005254.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0064I19 Length = 111644 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 152 gctcggcccctctccctccccc 173 |||||||||||||||||||||| Sbjct: 79292 gctcggcccctctccctccccc 79313 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 175 ccgcgcggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||| |||||| Sbjct: 56706 ccgcgccgccgtcgccgccgccgccctcg 56678
>ref|NM_209509.1| Eremothecium gossypii ADR060Cp (ADR060C), mRNA Length = 735 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Plus Query: 171 cccgccgcgcggccgtcgccgccgcc 196 ||||||||||||||| |||||||||| Sbjct: 436 cccgccgcgcggccgccgccgccgcc 461
>gb|AC006486.1|AC006486 Homo sapiens chromosome 19, BAC CIT-B-147B23 (BC85722), complete sequence Length = 111084 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Minus Query: 163 ctccctcccccgccgcgcggcc 184 |||||||||||||||||||||| Sbjct: 47188 ctccctcccccgccgcgcggcc 47167
>gb|U58535.1|HSERFG1 Homo sapiens ERF gene, exon 1, partial sequence Length = 332 Score = 44.1 bits (22), Expect = 0.26 Identities = 22/22 (100%) Strand = Plus / Plus Query: 163 ctccctcccccgccgcgcggcc 184 |||||||||||||||||||||| Sbjct: 36 ctccctcccccgccgcgcggcc 57
>gb|AC107768.25| Mus musculus chromosome 18, clone RP23-144B22, complete sequence Length = 217847 Score = 44.1 bits (22), Expect = 0.26 Identities = 25/26 (96%) Strand = Plus / Minus Query: 146 cttccagctcggcccctctccctccc 171 ||||||||||||| |||||||||||| Sbjct: 138972 cttccagctcggctcctctccctccc 138947
>ref|XM_480493.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1632 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 1116 cgcgcggccgtcgccgccgcc 1136
>ref|XM_470127.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1049 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ccgccgcgcggccgtcgccgccgcc 196 |||||||||||||| |||||||||| Sbjct: 516 ccgccgcgcggccgccgccgccgcc 540
>ref|NM_185740.1| Oryza sativa (japonica cultivar-group), mRNA Length = 774 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccct 60 ||||||||||||||||||||| Sbjct: 104 tgccgccgccgcctccgccct 124
>gb|BT018904.1| Zea mays clone EL01T0208E01.d mRNA sequence Length = 1815 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 167 ctcccccgccgcgcggccgtcgccgccgc 195 |||| |||||||||||||| ||||||||| Sbjct: 227 ctccgccgccgcgcggccgccgccgccgc 255
>ref|NM_008989.1| Mus musculus purine rich element binding protein A (Pura), mRNA Length = 1609 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 171 cccgccgcgcggccgtcgccgccgcctcc 199 ||||||||||||||| |||| |||||||| Sbjct: 126 cccgccgcgcggccgccgcctccgcctcc 154
>gb|AC131191.4| Mus musculus BAC clone RP24-464B16 from chromosome 18, complete sequence Length = 136832 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 cccgccgcgcggccgtcgccgccgcctcc 199 ||||||||||||||| |||| |||||||| Sbjct: 22269 cccgccgcgcggccgccgcctccgcctcc 22241
>gb|AC130714.3| Mus musculus BAC clone RP23-367L18 from chromosome 18, complete sequence Length = 193184 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Minus Query: 171 cccgccgcgcggccgtcgccgccgcctcc 199 ||||||||||||||| |||| |||||||| Sbjct: 127708 cccgccgcgcggccgccgcctccgcctcc 127680
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ccgccgcgcggccgtcgccgccgcc 196 |||||||||||||| |||||||||| Sbjct: 34088126 ccgccgcgcggccgccgccgccgcc 34088150 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||||| Sbjct: 11184059 cggccgccgccgccgcctccctcg 11184082
>ref|XM_544707.2| PREDICTED: Canis familiaris similar to Forkhead box protein B1 (Transcription factor FKH-5) (LOC487582), mRNA Length = 2147 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 38 gatgccgccgccgcctccgcc 58 ||||||||||||||||||||| Sbjct: 346 gatgccgccgccgcctccgcc 366
>ref|XM_810115.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510747.150) partial mRNA Length = 984 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 170 ccccgccgcgcggccgtcgccgccgcctccctc 202 ||||||||||| |||| ||||||||||||||| Sbjct: 125 ccccgccgcgccgccgctgccgccgcctccctc 93
>ref|XM_812084.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510657.80) partial mRNA Length = 975 Score = 42.1 bits (21), Expect = 1.0 Identities = 30/33 (90%) Strand = Plus / Minus Query: 170 ccccgccgcgcggccgtcgccgccgcctccctc 202 ||||||||||| |||| ||||||||||||||| Sbjct: 125 ccccgccgcgccgccgctgccgccgcctccctc 93
>emb|AL121796.17|HSDJ368B9 Human DNA sequence from clone RP3-368B9 on chromosome 4, complete sequence Length = 133066 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 65 ccctccaggaccccaagcccc 85 ||||||||||||||||||||| Sbjct: 25496 ccctccaggaccccaagcccc 25476
>emb|BX640446.1| Bordetella bronchiseptica strain RB50, complete genome; segment 10/16 Length = 348642 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 182 gccgtcgccgccgcctccctcgggg 206 ||||||||||||||| ||||||||| Sbjct: 183399 gccgtcgccgccgcccccctcgggg 183423
>gb|CP000267.1| Rhodoferax ferrireducens DSM 15236, complete genome Length = 4712337 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 171 cccgccgcgcggccgtcgccgccgc 195 ||||||||| ||||||||||||||| Sbjct: 553963 cccgccgcgaggccgtcgccgccgc 553939
>tpg|BK001744.1| TPA: TPA_exp: Suid herpesvirus 1, complete genome Length = 143461 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 30266 cgcgcggccgtcgccgccgcc 30246
>gb|AC163004.1| Gap filling sequence from Zea mays clone ZMMBBb0382K21, from chromosome 8, complete sequence Length = 21864 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cggcccctctccctcccccgc 175 ||||||||||||||||||||| Sbjct: 15162 cggcccctctccctcccccgc 15182
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 24790065 cggccgtcgccgccgcctccc 24790085 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 24783867 cggccgtcgccgccgcctccc 24783847
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 9988991 cggccgtcgccgccgcctccc 9988971
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 ccgcgcggccgtcgccgccgcctcc 199 |||||| |||||||||||||||||| Sbjct: 20693347 ccgcgccgccgtcgccgccgcctcc 20693371 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 ccagctcggcccctctccctccccc 173 |||||||||||| |||||||||||| Sbjct: 18195379 ccagctcggcccatctccctccccc 18195355 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 24069835 gccgccgccgcctccgccct 24069854 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccctcg 203 ||||| |||||||||||||||||| Sbjct: 19315552 cggccatcgccgccgcctccctcg 19315529 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 9258767 gccgccgccgcctccgccct 9258748 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 9233948 gccgccgccgcctccgccct 9233929 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 2384765 tgccgccgccgcctccgccc 2384784 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 ||||||||||||| |||||||||| Sbjct: 1961520 cgccgcgcggccgccgccgccgcc 1961543
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ccgccgcgcggccgtcgccgccgcc 196 |||||||||||||| |||||||||| Sbjct: 34178598 ccgccgcgcggccgccgccgccgcc 34178622 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||||| Sbjct: 11180822 cggccgccgccgccgcctccctcg 11180845
>gb|AC104433.8| Oryza sativa chromosome 3 BAC OJ1754_E06 genomic sequence, complete sequence Length = 163828 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 172 ccgccgcgcggccgtcgccgccgcc 196 |||||||||||||| |||||||||| Sbjct: 51938 ccgccgcgcggccgccgccgccgcc 51962
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 ccgccgccgcctccgccctgg 62 ||||||||||||||||||||| Sbjct: 1052626 ccgccgccgcctccgccctgg 1052606
>dbj|AP004401.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0534A03 Length = 153170 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 40 tgccgccgccgcctccgccct 60 ||||||||||||||||||||| Sbjct: 22169 tgccgccgccgcctccgccct 22149
>dbj|AP005441.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0056O06 Length = 151038 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 96537 cgcgcggccgtcgccgccgcc 96517
>dbj|AP005195.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0567H04 Length = 181420 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 178 cgcggccgtcgccgccgcctccctc 202 |||||||| |||||||||||||||| Sbjct: 138533 cgcggccgccgccgccgcctccctc 138509
>dbj|AP005189.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0474B11 Length = 141702 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 149 ccagctcggcccctctccctccccc 173 |||||||||||| |||||||||||| Sbjct: 74565 ccagctcggcccatctccctccccc 74589
>dbj|AP005128.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0466E03 Length = 138343 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 18295 cggccgtcgccgccgcctccc 18275
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome Length = 6021225 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 3770757 cgcgcggccgtcgccgccgcc 3770737
>dbj|AP006553.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0061G23 Length = 144220 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 149 ccagctcggcccctctccctccccc 173 |||||||||||| |||||||||||| Sbjct: 75751 ccagctcggcccatctccctccccc 75727
>dbj|AP003682.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0427B07 Length = 172058 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 175 ccgcgcggccgtcgccgccgcctcc 199 |||||| |||||||||||||||||| Sbjct: 115754 ccgcgccgccgtcgccgccgcctcc 115778
>dbj|AP005724.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0017I18 Length = 146304 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 144438 cggccgtcgccgccgcctccc 144418
>dbj|AP005520.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0426E02 Length = 166985 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ccccgccgcgcggccgtcgcc 190 ||||||||||||||||||||| Sbjct: 2031 ccccgccgcgcggccgtcgcc 2051
>dbj|AP005096.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1104G07 Length = 119643 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 170 ccccgccgcgcggccgtcgcc 190 ||||||||||||||||||||| Sbjct: 86357 ccccgccgcgcggccgtcgcc 86377
>dbj|AP006532.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1446H11 Length = 135488 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 73938 cggccgtcgccgccgcctccc 73958
>dbj|AK105369.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-120-B08, full insert sequence Length = 727 Score = 42.1 bits (21), Expect = 1.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 178 cgcggccgtcgccgccgcctccctc 202 |||||||| |||||||||||||||| Sbjct: 60 cgcggccgccgccgccgcctccctc 84
>gb|AC157977.1| Genomic sequence for Zea mays chromosome 8 BAC clone ZMMBBb0284N04, complete sequence Length = 107631 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 155 cggcccctctccctcccccgc 175 ||||||||||||||||||||| Sbjct: 3298 cggcccctctccctcccccgc 3318
>dbj|AP005503.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0560B10, complete sequence Length = 108295 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 61848 cggccgtcgccgccgcctccc 61868
>gb|AC005738.1|AC005738 Homo sapiens chromosome 5, BAC clone 7g12 (LBNL H126), complete sequence Length = 134506 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 107 gcctcccgcccctcctccgtc 127 ||||||||||||||||||||| Sbjct: 31093 gcctcccgcccctcctccgtc 31113
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 24718271 cggccgtcgccgccgcctccc 24718291 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 24712073 cggccgtcgccgccgcctccc 24712053
>emb|AL954829.6|CNS08CD5 Oryza sativa chromosome 12, . BAC OSJNBa0044E20 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 140383 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 97222 cggccgtcgccgccgcctccc 97242 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccc 200 ||||||||||||||||||||| Sbjct: 91024 cggccgtcgccgccgcctccc 91004
>emb|AJ319028.1|PVI319028 Suid herpesvirus 1 strain Kaplan ul30 gene (partial), ul31 gene, ul32 gene and ul33 gene (partial) Length = 2600 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgcc 196 ||||||||||||||||||||| Sbjct: 1721 cgcgcggccgtcgccgccgcc 1701
>gb|U02098.1|MMU02098 Mus musculus Pur-alpha mRNA, complete cds Length = 1609 Score = 42.1 bits (21), Expect = 1.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 171 cccgccgcgcggccgtcgccgccgcctcc 199 ||||||||||||||| |||| |||||||| Sbjct: 126 cccgccgcgcggccgccgcctccgcctcc 154
>gb|U20660.1|DVU20660 Drosophila virilis suppressor of sable homolog gene, complete cds Length = 8527 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 38 gatgccgccgccgcctccgcc 58 ||||||||||||||||||||| Sbjct: 2948 gatgccgccgccgcctccgcc 2928
>gb|AC026709.7| Homo sapiens chromosome 5 clone CTD-2084I18, complete sequence Length = 139402 Score = 42.1 bits (21), Expect = 1.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 50 gcctccgccctggtcccctcc 70 ||||||||||||||||||||| Sbjct: 31590 gcctccgccctggtcccctcc 31570
>gb|AC134474.4| Mus musculus BAC clone RP23-234N16 from chromosome 6, complete sequence Length = 171491 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 171150 ccaaacgccggcgatatatggatg 171127
>ref|NM_194570.1| Oryza sativa (japonica cultivar-group) putative peptide/amino acid transporter (OSJNBb0012A20.7), mRNA Length = 708 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccctggtc 64 |||||||||||||| ||||||||| Sbjct: 519 gccgccgccgcctctgccctggtc 496
>ref|XM_467119.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1099 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 75 atggatgccgccgccgccgccgcc 52
>ref|XM_506893.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1003_B06.37 mRNA Length = 1256 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 229 atggatgccgccgccgccgccgcc 206
>gb|AC167561.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940117D9, complete sequence Length = 143368 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||| ||||||||||| Sbjct: 99222 atggatgccgcctccgcctccgcc 99199
>ref|NM_197129.1| Oryza sativa (japonica cultivar-group) putative polyubiquitin (OSJNBa0051D19.9), mRNA Length = 501 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 356 gccgccgccgcctccgccct 337
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 |||||||| ||||||||||||||| Sbjct: 609717 cgccgcgccgccgtcgccgccgcc 609740
>ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 26 gccgccgccgcctccgccct 7
>ref|NM_005654.4| Homo sapiens nuclear receptor subfamily 2, group F, member 1 (NR2F1), mRNA Length = 3210 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 990 gccgccgccgcctccgccct 1009
>ref|NM_192558.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1437 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 19 gccgccgccgcctccgccct 38
>ref|NM_031597.2| Rattus norvegicus potassium voltage-gated channel, subfamily Q, member 3 (Kcnq3), mRNA Length = 5927 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgtcgccgccgcctccct 201 |||||||||||||||||||| Sbjct: 62 gccgtcgccgccgcctccct 81
>ref|XM_476567.1| Oryza sativa (japonica cultivar-group), mRNA Length = 459 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gcggccgtcgccgccgcctccctc 202 ||||||| |||||||||||||||| Sbjct: 186 gcggccggcgccgccgcctccctc 163
>ref|NM_185776.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1221 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 1016 gccgccgccgcctccgccct 997
>gb|BC017493.1| Homo sapiens nuclear receptor subfamily 2, group F, member 1, mRNA (cDNA clone MGC:17907 IMAGE:3912075), complete cds Length = 3210 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 990 gccgccgccgcctccgccct 1009
>gb|CP000144.1| Rhodobacter sphaeroides 2.4.1 chromosome 2, complete genome Length = 943016 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gcgcggccgtcgccgccgcc 196 |||||||||||||||||||| Sbjct: 405057 gcgcggccgtcgccgccgcc 405076
>gb|AC108499.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1187_E11, complete sequence Length = 133352 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 165 ccctcccccgccgcgcggccgtcgccgccgcc 196 ||||||| ||||||| || ||||||||||||| Sbjct: 75476 ccctcccacgccgcgtggtcgtcgccgccgcc 75507
>gb|AC079685.2| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0012A20, complete sequence Length = 131599 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccctggtc 64 |||||||||||||| ||||||||| Sbjct: 42358 gccgccgccgcctctgccctggtc 42381
>gb|AC112972.9| Mus musculus chromosome 15, clone RP24-450J12, complete sequence Length = 148336 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgtcgccgccgcctccct 201 |||||||||||||||||||| Sbjct: 101040 gccgtcgccgccgcctccct 101059
>gb|AY733062.1| Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06var allele, exon 2 and partial cds Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>gb|AY375873.1| Homo sapiens 4AOH 100070 EMJ MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06041 allele, exons 1 through 4, and partial cds Length = 5600 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 2158 ctccgcccgggtcccctccaggac 2135
>gb|AY375872.1| Homo sapiens 10IHWS 9062 WDV MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0603 allele, exons 1 through 4, and partial cds Length = 5600 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 2158 ctccgcccgggtcccctccaggac 2135
>gb|AY375871.1| Homo sapiens 10IHWS 9010 AMAI MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0602 allele, exons 1 through 4, and partial cds Length = 5599 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 2158 ctccgcccgggtcccctccaggac 2135
>gb|AY375870.1| Homo sapiens 4AOH 100040 WAL FD MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0602 allele, exons 1 through 4, and partial cds Length = 5425 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 1984 ctccgcccgggtcccctccaggac 1961
>gb|AC125444.9| Mus musculus chromosome 1, clone RP24-499L20, complete sequence Length = 162238 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 11049 gccgccgccgcctccgccct 11030
>gb|AC010707.17| Drosophila melanogaster clone BACR06P10, complete sequence Length = 176969 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 133708 gccgccgccgcctccgccct 133689
>gb|AC010846.13| Drosophila melanogaster clone BACR13G13, complete sequence Length = 192540 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 36272 gccgccgccgcctccgccct 36253
>gb|AC110897.11| Mus musculus chromosome 15, clone RP24-108J19, complete sequence Length = 157916 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgtcgccgccgcctccct 201 |||||||||||||||||||| Sbjct: 12155 gccgtcgccgccgcctccct 12174
>gb|AC138214.8| Mus musculus chromosome 1, clone RP23-404A6, complete sequence Length = 203478 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 194819 gccgccgccgcctccgccct 194800
>gb|AC124779.4| Mus musculus BAC clone RP23-100O18 from chromosome 6, complete sequence Length = 197482 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 36002 ccaaacgccggcgatatatggatg 35979
>gb|BC052460.1| Mus musculus activating transcription factor 7 interacting protein, mRNA (cDNA clone MGC:63433 IMAGE:6834550), complete cds Length = 4543 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1922 ccaaacgccggcgatatatggatg 1945
>gb|BC031154.1| Mus musculus HIV-1 Rev binding protein, mRNA (cDNA clone MGC:37365 IMAGE:4976622), complete cds Length = 2375 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 140 gccgccgccgcctccgccct 121
>ref|NM_019426.2| Mus musculus activating transcription factor 7 interacting protein (Atf7ip), mRNA Length = 4543 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1922 ccaaacgccggcgatatatggatg 1945
>gb|AE009114.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 140 of 256 of the complete sequence Length = 10046 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 8618 tgccgccgccgcctccgccc 8637
>ref|NM_009628.2| Mus musculus activity-dependent neuroprotective protein (Adnp), mRNA Length = 4903 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gccgcgcggccgtcgccgcc 193 |||||||||||||||||||| Sbjct: 205 gccgcgcggccgtcgccgcc 224
>gb|AC146766.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone B1112E06, complete sequence Length = 177488 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctcc 199 |||||||||||||||||||| Sbjct: 104125 cggccgtcgccgccgcctcc 104144
>gb|DQ179039.1| Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*06new allele, exon 2 and partial cds Length = 240 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 198 ctccgcccgggtcccctccaggac 175
>gb|AY663415.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA03715 MHC class II antigen (HLA-DQB1) gene, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*0103 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 100761 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 9306 ctccgcccgggtcccctccaggac 9283
>gb|AY663411.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14663 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 99966 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 4811 ctccgcccgggtcccctccaggac 4788
>gb|AY663406.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA10923 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, HLA-DRB1-DRB1*150101 allele, complete cds Length = 103395 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 15784 ctccgcccgggtcccctccaggac 15761
>gb|AY663395.1| Homo sapiens voucher Coriell Cell Repository DNA sample NA14660 MHC class II antigen (HLA-DQB1) gene, HLA-DQB1-DQB1*0602 allele, MHC class II antigen (HLA-DQA1) gene, HLA-DQA1-DQA1*010201 allele, and MHC class II antigen (HLA-DRB1) gene, complete cds Length = 104996 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 4670 ctccgcccgggtcccctccaggac 4647
>gb|AF484556.1| Streptomyces atroolivaceus leinamycin biosynthetic gene cluster, complete sequence Length = 135638 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 171 cccgccgcgcggccgtcgccgccgcctc 198 ||||||| |||| ||||||||||||||| Sbjct: 126480 cccgccgggcggtcgtcgccgccgcctc 126453
>gb|AC118639.12| Mus musculus chromosome 15, clone RP24-112I4, complete sequence Length = 166053 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gcccccatcccagctcccaa 21 |||||||||||||||||||| Sbjct: 59479 gcccccatcccagctcccaa 59498
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 66614 gccgccgccgcctccgccct 66595
>gb|AC106818.2| Homo sapiens chromosome 5 clone RP11-65F13, complete sequence Length = 180056 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 51701 gccgccgccgcctccgccct 51720
>gb|BC021873.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:28064 IMAGE:3709271), complete cds Length = 1145 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 306 tgccgccgccgcctccgccc 287
>gb|BC099202.1| Rattus norvegicus similar to HIV-1 Rev binding protein, mRNA (cDNA clone MGC:116375 IMAGE:7384071), complete cds Length = 2017 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 150 gccgccgccgcctccgccct 131
>gb|BC037617.1| Mus musculus mRNA similar to hypothetical protein FLJ10688 (cDNA clone IMAGE:5400597) Length = 5261 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1924 ccaaacgccggcgatatatggatg 1947
>emb|AJ012155.1|HSA012155 Homo sapiens HLA-DQB1*06new1 allele, exon 2, partial Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>emb|AL662789.11| Human DNA sequence from clone XXbac-254F23 on chromosome 6 contains the 5' end of the HLA-DRB1 gene for major histocompatibility complex, class II, DR beta 1, the HLA-DQA1 gene for major histocompatibility complex, class II, DQ alpha 1, the HLA-DQB1 gene for major histocompatibility complex, class II, DQ beta 1, a cytochrome C oxidase polypeptide III pseudogene, a major histocompatibility complex, class II, beta polypeptide pseudogene and two CpG islands, complete sequence Length = 147557 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 76753 ctccgcccgggtcccctccaggac 76776
>gb|AC145127.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone Pseudo10p0.0-10p4.4, complete sequence Length = 2331000 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccctggtc 64 |||||||||||||| ||||||||| Sbjct: 761501 gccgccgccgcctctgccctggtc 761524
>emb|X96420.1|HSHLADQB6 H.sapiens mRNA for HLA-DQ beta chain Length = 786 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 318 ctccgcccgggtcccctccaggac 295
>emb|BX569689.1| Synechococcus sp. WH8102 complete genome; segment 1/7 Length = 348764 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctcc 199 |||||||||||||||||||| Sbjct: 202596 cggccgtcgccgccgcctcc 202577
>emb|AL939121.1|SCO939121 Streptomyces coelicolor A3(2) complete genome; segment 18/29 Length = 292100 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 226 catgacgcccggcgccgacg 245 |||||||||||||||||||| Sbjct: 169269 catgacgcccggcgccgacg 169250
>emb|AJ781828.1| Streptomyces fradiae ap gene for aminopeptidase Length = 1634 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 284 gtgcttggccggctggtagc 303 |||||||||||||||||||| Sbjct: 760 gtgcttggccggctggtagc 741
>emb|AJ535315.2|HSA535315 Homo sapiens partial HLA-DQB1 gene for human leukocyte antigen-DQ beta chain, HLA-DQB1*06 allele, exon 2 Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>emb|AJ223253.1|HOS223253 Homo sapiens HLA-DQB1*06x gene, exon 2 and 3 Length = 552 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>emb|AJ001257.1|HSDQB113 Homo sapiens HLA-DQB1 gene, exon 2, allele DRB1*1301/DRB3*0202/DQB1*06 Length = 261 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 200 ctccgcccgggtcccctccaggac 177
>gb|AC118669.2| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0011G21, from chromosome 3, complete sequence Length = 142401 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||||| Sbjct: 97416 cggccgccgccgccgcctccctcg 97439
>gb|AY124588.1| Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*CB846 allele, exon 2 and partial cds Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>gb|AC104186.2| Homo sapiens chromosome 3 clone RP11-391M1, complete sequence Length = 186317 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 183 ccgtcgccgccgcctccctc 202 |||||||||||||||||||| Sbjct: 19528 ccgtcgccgccgcctccctc 19547
>gb|AC022144.8| Homo sapiens chromosome 19 clone CTD-2540F13, complete sequence Length = 149271 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 106 tgcctcccgcccctcctccgtcagaccc 133 ||||||| ||||||||||| |||||||| Sbjct: 61406 tgcctccagcccctcctccctcagaccc 61379
>gb|AC008440.9| Homo sapiens chromosome 19 clone CTC-331H23, complete sequence Length = 169997 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ctgcctcccgcccctcctcc 124 |||||||||||||||||||| Sbjct: 135671 ctgcctcccgcccctcctcc 135690
>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome Length = 5513844 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 176 cgcgcggccgtcgccgccgc 195 |||||||||||||||||||| Sbjct: 2041494 cgcgcggccgtcgccgccgc 2041475
>gb|AF384556.1| Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*CB846 allele, exon 2 and partial cds Length = 240 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 198 ctccgcccgggtcccctccaggac 175
>tpg|BK000763.1| TPA: TPA_inf: Oryza sativa transposon Rim2-M177, complete sequence Length = 1138 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 |||||| ||||||||||||||||| Sbjct: 690 cgccgctcggccgtcgccgccgcc 713
>tpg|BK005061.1| TPA: TPA_inf: Oryza sativa (indica cultivar-group) WRKY transcription factor 58 (WRKY58) gene, complete cds Length = 856 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Minus Query: 165 ccctcccccgccgcgcggccgtcgccgccgcc 196 ||||||| ||||||| || ||||||||||||| Sbjct: 307 ccctcccacgccgcgtggtcgtcgccgccgcc 276
>ref|NM_167493.1| Drosophila melanogaster cabeza CG3606-RA, transcript variant A (caz), mRNA Length = 1624 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 759 gccgccgccgcctccgccct 740
>gb|AC118340.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0085H08, from chromosome 3, complete sequence Length = 126708 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||||| Sbjct: 96670 cggccgccgccgccgcctccctcg 96647
>ref|NM_078641.2| Drosophila melanogaster cabeza CG3606-RB, transcript variant B (caz), mRNA Length = 1624 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 759 gccgccgccgcctccgccct 740
>dbj|AK134252.1| Mus musculus 13 days embryo forelimb cDNA, RIKEN full-length enriched library, clone:5930406K17 product:activating transcription factor 7 interacting protein, full insert sequence Length = 2219 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1929 ccaaacgccggcgatatatggatg 1952
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 1553946 tgccgccgccgcctccgccc 1553965
>dbj|AK132359.1| Mus musculus 15 days embryo head cDNA, RIKEN full-length enriched library, clone:4022433C03 product:activating transcription factor 7 interacting protein, full insert sequence Length = 2854 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 542 ccaaacgccggcgatatatggatg 565
>gb|AC163764.4| Pan troglodytes BAC clone CH251-169M18 from chromosome unknown, complete sequence Length = 195947 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 105 ctgcctcccgcccctcctcc 124 |||||||||||||||||||| Sbjct: 27839 ctgcctcccgcccctcctcc 27858
>dbj|AK167542.1| Mus musculus cDNA, RIKEN full-length enriched library, clone:I530020A06 product:activating transcription factor 7 interacting protein, full insert sequence Length = 4419 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1968 ccaaacgccggcgatatatggatg 1991
>gb|U77344.1|HSU77344 Human MHC class II antigen DQB1 (HLA-DQB1) gene, allele DQB1*0602v, partial cds Length = 264 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 217 ctccgcccgggtcccctccaggac 194
>gb|AF087454.2|AF087454 Rattus norvegicus potassium channel (KCNQ3) mRNA, complete cds Length = 5927 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 gccgtcgccgccgcctccct 201 |||||||||||||||||||| Sbjct: 62 gccgtcgccgccgcctccct 81
>gb|AY258420.1| Homo sapiens nonfunctional MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0603N allele, partial sequence Length = 267 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>dbj|AK049400.1| Mus musculus 7 days embryo whole body cDNA, RIKEN full-length enriched library, clone:C430003L16 product:HIV-1 Rev binding protein, full insert sequence Length = 3152 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 140 gccgccgccgcctccgccct 121
>dbj|AK048326.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130049H11 product:nucleoporin-like protein Rab homolog [Homo sapiens], full insert sequence Length = 3138 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 154 gccgccgccgcctccgccct 135
>gb|AF091305.2|AF091305 Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0602 allele, exon 2 and partial cds Length = 300 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 21174553 gccgccgccgcctccgccct 21174572
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctcc 199 |||||||||||||||||||| Sbjct: 23513439 cggccgtcgccgccgcctcc 23513458
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 18146514 gccgccgccgcctccgccct 18146533 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccctggtc 64 |||||||||||||| ||||||||| Sbjct: 761501 gccgccgccgcctctgccctggtc 761524
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 4.1 Identities = 29/32 (90%) Strand = Plus / Plus Query: 165 ccctcccccgccgcgcggccgtcgccgccgcc 196 ||||||| ||||||| || ||||||||||||| Sbjct: 26050715 ccctcccacgccgcgtggtcgtcgccgccgcc 26050746
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 26520703 atggatgccgccgccgccgccgcc 26520726
>gb|AC008750.9| Homo sapiens chromosome 19 clone CTD-2616J11, complete sequence Length = 143045 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 27046 gcccctcctccgtcagaccc 27065
>gb|AC008403.8| Homo sapiens chromosome 19 clone CTC-273B12, complete sequence Length = 190076 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 62396 gcccctcctccgtcagaccc 62377 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 62359 gcccctcctccgtcagaccc 62340 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 62322 gcccctcctccgtcagaccc 62303 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 62286 gcccctcctccgtcagaccc 62267 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 114 gcccctcctccgtcagaccc 133 |||||||||||||||||||| Sbjct: 62250 gcccctcctccgtcagaccc 62231
>dbj|AP003243.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0415C01 Length = 138701 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 14727 gccgccgccgcctccgccct 14746
>gb|BT004875.1| Drosophila melanogaster LD22761 full insert cDNA Length = 1652 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 759 gccgccgccgcctccgccct 740
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 141970 gccgccgccgcctccgccct 141951
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 79262 gccgccgccgcctccgccct 79243
>gb|M27657.1|HUMMHDQB02 Homo sapiens MHC class II antigen precursor (HLA-DQB1) gene, exon 2 and partial cds Length = 349 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 224 ctccgcccgggtcccctccaggac 201
>dbj|AP004676.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1003_B06 Length = 131956 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 120619 atggatgccgccgccgccgccgcc 120642
>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome Length = 4659019 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 185 gtcgccgccgcctccctcggggtg 208 |||||||||||| ||||||||||| Sbjct: 233070 gtcgccgccgccgccctcggggtg 233093
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 cgcggccgtcgccgccgcct 197 |||||||||||||||||||| Sbjct: 5598546 cgcggccgtcgccgccgcct 5598527 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 140 gctcgccttccagctcggcc 159 |||||||||||||||||||| Sbjct: 2675345 gctcgccttccagctcggcc 2675326
>dbj|AP003767.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0036F10 Length = 149415 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 16223 tgccgccgccgcctccgccc 16242
>dbj|AP003526.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0548D03 Length = 156709 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 ||||||||||||| |||||||||| Sbjct: 90300 cgccgcgcggccgccgccgccgcc 90323
>dbj|AP003491.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0662B01 Length = 155913 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 152789 gccgccgccgcctccgccct 152770 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 127970 gccgccgccgcctccgccct 127951
>dbj|AP003709.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBb0006H05 Length = 154821 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 173 cgccgcgcggccgtcgccgccgcc 196 |||||| ||||||||||||||||| Sbjct: 74400 cgccgctcggccgtcgccgccgcc 74423
>dbj|AP003487.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0007O20 Length = 147363 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 106566 tgccgccgccgcctccgccc 106585
>dbj|AP005813.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0676F10 Length = 142510 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 26108 gccgccgccgcctccgccct 26089 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 1289 gccgccgccgcctccgccct 1270
>dbj|AP005450.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0438E12 Length = 146851 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccctcg 203 ||||| |||||||||||||||||| Sbjct: 20325 cggccatcgccgccgcctccctcg 20302
>dbj|AP005006.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0519E06 Length = 170634 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 63084 atggatgccgccgccgccgccgcc 63107
>dbj|AP003711.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0417G12 Length = 163568 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 3293 gccgccgccgcctccgccct 3312
>dbj|AP003626.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0429G06 Length = 158321 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 79528 gccgccgccgcctccgccct 79547
>dbj|AP004314.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0495H05 Length = 205595 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 179 gcggccgtcgccgccgcctccctc 202 ||||||| |||||||||||||||| Sbjct: 58385 gcggccggcgccgccgcctccctc 58362
>dbj|AK129214.1| Mus musculus mRNA for mKIAA0784 protein Length = 4930 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 174 gccgcgcggccgtcgccgcc 193 |||||||||||||||||||| Sbjct: 255 gccgcgcggccgtcgccgcc 274
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 286 gccgccgccgcctccgccct 267
>dbj|AK108774.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-H10, full insert sequence Length = 1510 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 138 gccgccgccgcctccgccct 157
>dbj|AK107405.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-127-E03, full insert sequence Length = 1276 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 173 cgccgcgcggccgtcgccgccgcc 196 ||||||||||||| |||||||||| Sbjct: 1053 cgccgcgcggccgccgccgccgcc 1030
>dbj|AK106309.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-101-D01, full insert sequence Length = 1584 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 1162 gccgccgccgcctccgccct 1143
>gb|AF065159.3|AF065159 Bradyrhizobium japonicum putative arylsulfatase (arsA), putative soluble lytic transglycosylase precursor (sltA), dihydrodipicolinate synthase (dapA), MscL (mscL), SmpB (smpB), BcpB (bcpB), RnpO (rnpO), RelA/SpoT homolog (relA), PdxJ (pdxJ), and acyl carrier protein synthase AcpS (acpS) genes, complete cds; prokaryotic type I signal peptidase SipF (sipF) gene, sipF-sipS allele, complete cds; RNase III (rnc), GTP-binding protein Era (era), hypothetical protein, recO-like protein, topoisomerase II (gyrA), putative ABC transporter, putative GMC-oxidoreductase, hypothetical protein, putative cytochrome C binding protein (cyc4), putative polytopic integral membrane protein, superoxide dismutase SodM-like protein, putative inner membrane protein, AttM-like protein (attM), adenylate cyclases-like protein, and putative inner membrane protein (spcT) genes, complete cds; and unknown genes Length = 35209 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 cgcggccgtcgccgccgcct 197 |||||||||||||||||||| Sbjct: 31849 cgcggccgtcgccgccgcct 31868
>dbj|AK073462.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033042E16, full insert sequence Length = 1257 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 229 atggatgccgccgccgccgccgcc 206
>dbj|AK072399.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023080H11, full insert sequence Length = 2147 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 49 gccgccgccgcctccgccct 68
>dbj|AK071835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023115A04, full insert sequence Length = 1679 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 180 cggccgtcgccgccgcctccctcg 203 ||||| |||||||||||||||||| Sbjct: 147 cggccatcgccgccgcctccctcg 124
>emb|BX005039.11| Mouse DNA sequence from clone RP23-391M18 on chromosome 2, complete sequence Length = 145263 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 174 gccgcgcggccgtcgccgcc 193 |||||||||||||||||||| Sbjct: 39104 gccgcgcggccgtcgccgcc 39085
>dbj|AK071104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023078D20, full insert sequence Length = 1961 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 358 gccgccgccgcctccgccct 377
>dbj|AK067474.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013107G14, full insert sequence Length = 2090 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctccctcg 203 |||||| ||||||||||||||||| Sbjct: 170 cggccgccgccgccgcctccctcg 193
>gb|BC048685.1| Mus musculus nucleolar protein family A, member 1 (H/ACA small nucleolar RNPs), mRNA (cDNA clone MGC:59268 IMAGE:6510731), complete cds Length = 1209 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 40 tgccgccgccgcctccgccc 59 |||||||||||||||||||| Sbjct: 361 tgccgccgccgcctccgccc 342
>dbj|AK058231.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-011-B12, full insert sequence Length = 1099 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 75 atggatgccgccgccgccgccgcc 52
>gb|AF087939.1|AF087939 Homo sapiens MHC class II antigen (HLA-DQB1) gene, HLA-DQB1*0616 allele, exon 3 and partial cds Length = 257 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>gb|AF112464.1|AF112464 Homo sapiens MHC class II antigen HLA-DQB1 precursor, gene (HLA-DQB1*0608 allele), partial cds Length = 247 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 198 ctccgcccgggtcccctccaggac 175
>gb|U39825.1|HSU39825 Human MHC class II HLA-DQ-beta-1 gene (0603-IDDM3 allele), exon 2, partial cds Length = 237 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 210 ctccgcccgggtcccctccaggac 187
>gb|U39822.1|HSU39822 Human MHC class II antigen HLA-DQ-beta-1 gene (0603-IDDM2 allele), exon 2, partial cds Length = 237 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 210 ctccgcccgggtcccctccaggac 187
>gb|U39821.1|HSU39821 Human MHC class II antigen HLA-DQ-beta-1 gene (0603-IDDM1 allele), exon 2, partial cds Length = 237 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 210 ctccgcccgggtcccctccaggac 187
>gb|U39809.1|HSU39809 Human MHC class II HLA-DQ-beta-1 (HLA-DQB1) gene, allele DQB1*0602-IDDM, exon 2, partial cds Length = 237 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 210 ctccgcccgggtcccctccaggac 187
>gb|AE003501.4| Drosophila melanogaster chromosome X, section 53 of 74 of the complete sequence Length = 323840 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 283380 gccgccgccgcctccgccct 283361
>gb|AC113049.22| Mus musculus chromosome 8, clone RP23-248P8, complete sequence Length = 200431 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 2 gcccccatcccagctcccaa 21 |||||||||||||||||||| Sbjct: 87083 gcccccatcccagctcccaa 87102
>gb|L34106.1|HUMMHDQBAY Human (clone 32) MHC class II HLA-DQB1*0603 mRNA, 3' end Length = 690 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>gb|L34105.1|HUMMHDQBAX Human (clone 1) MHC class II HLA-DQB1*0602 mRNA, 3' end Length = 690 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>gb|L37083.1|DRORNABP Drosophila melanogaster RNA binding protein (cabeza) gene, complete cds Length = 1657 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 779 gccgccgccgcctccgccct 760
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 18155767 gccgccgccgcctccgccct 18155786 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccctggtc 64 |||||||||||||| ||||||||| Sbjct: 761498 gccgccgccgcctctgccctggtc 761521
>ref|NM_010472.1| Mus musculus HIV-1 Rev binding protein (Hrb), mRNA Length = 3138 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 154 gccgccgccgcctccgccct 135
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 180 cggccgtcgccgccgcctcc 199 |||||||||||||||||||| Sbjct: 23823375 cggccgtcgccgccgcctcc 23823394
>emb|AL607002.3|OSJN00117 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0085H03, complete sequence Length = 132393 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 111939 gccgccgccgcctccgccct 111958
>emb|AJ307662.1|OSA307662 Oryza sativa genomic DNA fragment, chromosome 2 Length = 339972 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 35 atggatgccgccgccgcctccgcc 58 |||||||||||||||||| ||||| Sbjct: 226466 atggatgccgccgccgccgccgcc 226489
>emb|AM181332.1| Homo sapiens partial HLA-D gene for MHC class II antigen, HLA-DQB1*06new allele, exon 2 Length = 385 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>gb|AC141469.4| Mus musculus BAC clone RP24-439P5 from 5, complete sequence Length = 183468 Score = 40.1 bits (20), Expect = 4.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 149 ccagctcggcccctctccctcccccgcc 176 ||||||| ||||||||||||||||||| Sbjct: 53870 ccagctcctcccctctccctcccccgcc 53843
>gb|BC060246.1| Mus musculus activating transcription factor 7 interacting protein, mRNA (cDNA clone MGC:66955 IMAGE:5705945), complete cds Length = 4232 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 18 ccaaccgccggcgatatatggatg 41 |||| ||||||||||||||||||| Sbjct: 1905 ccaaacgccggcgatatatggatg 1928
>gb|M87042.1|HUMDQB106B Human HLA-GQB1*06 allele B Length = 223 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 198 ctccgcccgggtcccctccaggac 175
>dbj|AB209580.1| Homo sapiens mRNA for MHC class II antigen variant protein Length = 4641 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 349 ctccgcccgggtcccctccaggac 326
>gb|U39086.1|HSU39086 Human MHC class II antigen HLA-DQB1 (DQB1*0602-like allele) gene, partial cds Length = 257 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 200 ctccgcccgggtcccctccaggac 177
>gb|U13178.1|DMU13178 Drosophila melanogaster Canton-S RNA binding protein (SARFH) mRNA, complete cds Length = 1620 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 740 gccgccgccgcctccgccct 721
>gb|M15765.1|DROPENFSB D.melanogaster pen repeats mRNA, clone p19 Length = 1098 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 41 gccgccgccgcctccgccct 60 |||||||||||||||||||| Sbjct: 537 gccgccgccgcctccgccct 518
>emb|Z75044.1|HSZ75044 H.sapiens HLA-DQB1 gene Length = 171 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 163 ctccgcccgggtcccctccaggac 140
>gb|M59801.1|HUMMHDQB03 Human MHC class II DQB1*0603 mRNA (DQw1(w6)), partial cds Length = 324 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>emb|AJ003005.1|HSAJ3005 Homo Sapiens HLA-DQB1 gene, exon 2 Length = 272 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 211 ctccgcccgggtcccctccaggac 188
>gb|M22550.1|HUMMHDRCC Human MHC class II HLA-DQ beta mRNA (DR3,DQw), partial cds, clone 2041C72 Length = 282 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>gb|M20432.1|HUMMHDQBR Human MHC class II HLA-DQ-beta (DR2-DQw1/DR4 DQw3) mRNA, complete cds, clone ROF2D Length = 917 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 377 ctccgcccgggtcccctccaggac 354
>gb|M65050.1|HUMMHDBQ1M Human MHC HLA-DQB1 allele DBQ1.6 gene, partial cds Length = 173 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 164 ctccgcccgggtcccctccaggac 141
>gb|M65049.1|HUMMHDBQ1L Human MHC HLA-DQB1 allele DBQ1.5 gene, partial cds Length = 173 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 164 ctccgcccgggtcccctccaggac 141
>gb|M17207.1|HUMMHCQC Human MHC class II DQ-beta chain (Dw2) mRNA, partial cds, from cell line PGF Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>gb|M25327.1|HUMMHCDQ33 Homo sapiens MHC HLA-DBQ3 allele DQw3.3 mRNA, 5' end Length = 455 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 395 ctccgcccgggtcccctccaggac 372
>emb|X86327.1|HSDQB1X2 H.sapiens MHC class II HLA DQB1 gene, exon 2 Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 209 ctccgcccgggtcccctccaggac 186
>gb|M65048.1|HUMMHDBQ1K Human MHC HLA-DQB1 allele DBQ1.4 gene, partial cds Length = 173 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 164 ctccgcccgggtcccctccaggac 141
>gb|L12903.1|HUMHCB15A Human MHC HLA-DQB1.5 cell surface glycoprotein Length = 270 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 52 ctccgccctggtcccctccaggac 75 |||||||| ||||||||||||||| Sbjct: 222 ctccgcccgggtcccctccaggac 199
>dbj|AB024973.1| Streptomyces tauricus gene for ketosynthase, partial cds Length = 1179 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gccgccgcctccgccctggt 63 |||||||||||||||||||| Sbjct: 1039 gccgccgcctccgccctggt 1058
>dbj|AB024972.1| Streptomyces capoamus gene for ketosynthase, partial cds Length = 1179 Score = 40.1 bits (20), Expect = 4.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 44 gccgccgcctccgccctggt 63 |||||||||||||||||||| Sbjct: 1039 gccgccgcctccgccctggt 1058
>emb|AJ315104.1|RSE315104 Rytigynia senegalensis internal transcribed spacer 1 (ITS1), 5.8S rRNA gene and internal transcribed spacer 2 (ITS2) Length = 670 Score = 40.1 bits (20), Expect = 4.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 163 ctccctcccccgccgcgcggccgt 186 ||||||||||||| |||||||||| Sbjct: 63 ctccctcccccgcggcgcggccgt 40 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,147,068 Number of Sequences: 3902068 Number of extensions: 3147068 Number of successful extensions: 173567 Number of sequences better than 10.0: 227 Number of HSP's better than 10.0 without gapping: 244 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 161931 Number of HSP's gapped (non-prelim): 11636 length of query: 309 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 287 effective length of database: 17,147,199,772 effective search space: 4921246334564 effective search space used: 4921246334564 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
