| Clone Name | baet80d10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SARM1_MOUSE (Q6PDS3) Sterile alpha and TIR motif-containing prot... | 35 | 0.045 | 2 | SARM1_HUMAN (Q6SZW1) Sterile alpha and TIR motif-containing prot... | 29 | 3.2 | 3 | ENC_DROME (Q8MSX1) Protein encore | 28 | 9.5 |
|---|
>SARM1_MOUSE (Q6PDS3) Sterile alpha and TIR motif-containing protein 1 (Tir-1| homolog) Length = 724 Score = 35.4 bits (80), Expect = 0.045 Identities = 15/31 (48%), Positives = 20/31 (64%) Frame = -2 Query: 96 RRPAPSLLHQCARSLAGCACSGGRRARACVV 4 RR P+LL CA +LA CA GG+ + C+V Sbjct: 216 RRTDPALLRHCALALANCALHGGQTVQRCMV 246
>SARM1_HUMAN (Q6SZW1) Sterile alpha and TIR motif-containing protein 1 (Sterile| alpha and Armadillo repeat protein) (Tir-1 homolog) Length = 724 Score = 29.3 bits (64), Expect = 3.2 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = -2 Query: 96 RRPAPSLLHQCARSLAGCACSGGRRARACVV 4 RR P+LL CA +L CA GG+ + +V Sbjct: 216 RRTDPALLRHCALALGNCALHGGQAVQRRMV 246
>ENC_DROME (Q8MSX1) Protein encore| Length = 1818 Score = 27.7 bits (60), Expect = 9.5 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = -3 Query: 104 GGGGDQRHRCCTSARARWPAVPVAGGGA 21 GGGG ++HR T+A+ P + GG + Sbjct: 350 GGGGGKKHRANTNAKGNKPRLKNLGGSS 377 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 17,077,629 Number of Sequences: 219361 Number of extensions: 194048 Number of successful extensions: 916 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 909 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 916 length of database: 80,573,946 effective HSP length: 10 effective length of database: 78,380,336 effective search space used: 1881128064 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)