| Clone Name | baet80d01 |
|---|---|
| Clone Library Name | barley_pub |
>emb|X68654.1|HVCW21 H.vulgare Cw-21 mRNA Length = 705 Score = 190 bits (96), Expect = 5e-46 Identities = 99/100 (99%) Strand = Plus / Plus Query: 6 tagccatctcatcatctccagctgagctcggctgcgctactattccaaactcattaggga 65 ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct: 1 tagccatctcatcatctccagctgagctcggttgcgctactattccaaactcattaggga 60 Query: 66 tggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 |||||||||||||||||||||||||||||||||||||||| Sbjct: 61 tggctcgcgctgcagctagtcagctcgtgctggtcgccct 100
>emb|Z66529.1|HVGLTP4X9 H.vulgare Ltp4.2 gene Length = 1567 Score = 95.6 bits (48), Expect = 2e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 44 actattccaaactcattagggatggctcgcgctgcagctagtcagctcgtgctggtcgcc 103 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 644 actattgcaaactccttagggatggctcgcgctgcagctactcagctcgtgctggtcgcc 703
>gb|U63993.1|HVU63993 Hordeum vulgare lipid transfer protein (blt4.9) gene, complete cds Length = 3238 Score = 95.6 bits (48), Expect = 2e-17 Identities = 57/60 (95%) Strand = Plus / Plus Query: 44 actattccaaactcattagggatggctcgcgctgcagctagtcagctcgtgctggtcgcc 103 |||||| ||||||| ||||||||||||||||||||||||| ||||||||||||||||||| Sbjct: 2040 actattgcaaactccttagggatggctcgcgctgcagctactcagctcgtgctggtcgcc 2099
>emb|Z66528.1|HVGLTP4X3 H.vulgare ltp4.3 gene Length = 1862 Score = 69.9 bits (35), Expect = 1e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgcc 103 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 1030 atggctcgcgctgcagctactcagctcgtgctggtcgcc 1068 Score = 44.1 bits (22), Expect = 0.076 Identities = 31/34 (91%) Strand = Plus / Plus Query: 1 aaatctagccatctcatcatctccagctgagctc 34 ||||||||| |||||||||||||| ||| ||||| Sbjct: 964 aaatctagctatctcatcatctccggcttagctc 997
>emb|X68656.1|HVCW19 H.vulgare Cw-19 mRNA Length = 660 Score = 69.9 bits (35), Expect = 1e-09 Identities = 38/39 (97%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgcc 103 ||||||||||||||||||| ||||||||||||||||||| Sbjct: 46 atggctcgcgctgcagctactcagctcgtgctggtcgcc 84
>gb|AF334185.1|AF334185 Triticum aestivum lipid transfer protein precursor (LTP2) mRNA, complete cds Length = 730 Score = 60.0 bits (30), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 64 gatggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 |||||||||| ||||||||| | ||||||||||||||||||| Sbjct: 79 gatggctcgcactgcagctactaagctcgtgctggtcgccct 120
>emb|AJ852557.1| Triticum aestivum ltp9.5b gene for type 1 non specific lipid transfer protein precursor Length = 496 Score = 60.0 bits (30), Expect = 1e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 64 gatggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 |||||||||| ||||||||| | ||||||||||||||||||| Sbjct: 20 gatggctcgcactgcagctactaagctcgtgctggtcgccct 61
>gb|AY789644.1| Triticum aestivum lipid transfer protein 4 (LTP4) mRNA, complete cds Length = 345 Score = 50.1 bits (25), Expect = 0.001 Identities = 37/41 (90%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 ||||||||| || |||||| | ||||||||||||||||||| Sbjct: 1 atggctcgcactacagctactaagctcgtgctggtcgccct 41
>gb|AY754742.1| Triticum aestivum lipid transfer protein (LTP2) mRNA, complete cds Length = 348 Score = 50.1 bits (25), Expect = 0.001 Identities = 37/41 (90%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 ||||||||| ||||||||| | | ||||||||||||||||| Sbjct: 1 atggctcgcactgcagctactaaactcgtgctggtcgccct 41
>emb|Z37115.1|HVLTPPB H.vulgare (clone pKG285) mRNA for lipid transfer protein precursor Length = 691 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 75 ctgcagctagtcagctcgtgctggtcgcc 103 ||||||||| ||||||||||||||||||| Sbjct: 25 ctgcagctactcagctcgtgctggtcgcc 53
>gb|U18127.1|HVU18127 Hordeum vulgare phospholipid transfer protein precursor gene, complete cds Length = 573 Score = 50.1 bits (25), Expect = 0.001 Identities = 28/29 (96%) Strand = Plus / Plus Query: 75 ctgcagctagtcagctcgtgctggtcgcc 103 ||||||||| ||||||||||||||||||| Sbjct: 96 ctgcagctactcagctcgtgctggtcgcc 124
>gb|AY566607.1| Triticum aestivum lipid transfer protein (LPT1) gene, complete cds Length = 3448 Score = 44.1 bits (22), Expect = 0.076 Identities = 37/42 (88%) Strand = Plus / Plus Query: 64 gatggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 |||||||||| ||||||| | ||||||||||||||||||| Sbjct: 2856 gatggctcgcactgcagcaacaaagctcgtgctggtcgccct 2897
>gb|AF302788.1|AF302788 Triticum aestivum lipid transfer protein precursor (LTP1) mRNA, complete cds Length = 737 Score = 44.1 bits (22), Expect = 0.076 Identities = 37/42 (88%) Strand = Plus / Plus Query: 64 gatggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 |||||||||| ||||||| | ||||||||||||||||||| Sbjct: 60 gatggctcgcactgcagcaacaaagctcgtgctggtcgccct 101
>gb|AY796184.1| Triticum aestivum lipid transfer protein (LTP1) mRNA, complete cds Length = 348 Score = 42.1 bits (21), Expect = 0.30 Identities = 36/41 (87%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 ||||||||| ||||||| | ||||||||||||||||||| Sbjct: 1 atggctcgcactgcagcaacaaagctcgtgctggtcgccct 41
>gb|DQ465677.1| Triticum aestivum clone Lt10B6 non-specific lipid transfer protein 1 precursor, mRNA, complete cds Length = 348 Score = 42.1 bits (21), Expect = 0.30 Identities = 36/41 (87%) Strand = Plus / Plus Query: 65 atggctcgcgctgcagctagtcagctcgtgctggtcgccct 105 ||||||||| ||||||| | ||||||||||||||||||| Sbjct: 1 atggctcgcactgcagcaacaaagctcgtgctggtcgccct 41
>gb|AC011478.3| Homo sapiens chromosome 19 clone CTC-565M22, complete sequence Length = 100147 Score = 40.1 bits (20), Expect = 1.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 2 aatctagccatctcatcatctcca 25 ||||||||||||||||| |||||| Sbjct: 90115 aatctagccatctcatcctctcca 90138
>gb|AC145205.2| Homo sapiens chromosome 17, clone RP11-1224M18, complete sequence Length = 81310 Score = 38.2 bits (19), Expect = 4.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 9 ccatctcatcatctccagc 27 ||||||||||||||||||| Sbjct: 3631 ccatctcatcatctccagc 3649
>emb|AJ784901.1| Triticum aestivum mRNA for type 1 non-specific lipid transfer protein precursor (ltp9.2 gene) Length = 708 Score = 38.2 bits (19), Expect = 4.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 aaatctagccatctcatcatctc 23 ||||||||| ||||||||||||| Sbjct: 3 aaatctagctatctcatcatctc 25
>emb|AL049737.4|HSJ828K20 Human DNA sequence from clone RP5-828K20 on chromosome 20 Contains the ST13P gene for suppression of tumorigenicity 13 (colon carcinoma) (Hsp70 interacting protein) pseudogene, complete sequence Length = 59312 Score = 38.2 bits (19), Expect = 4.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 14 tcatcatctccagctgagc 32 ||||||||||||||||||| Sbjct: 19873 tcatcatctccagctgagc 19891
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 38.2 bits (19), Expect = 4.7 Identities = 19/19 (100%) Strand = Plus / Plus Query: 68 gctcgcgctgcagctagtc 86 ||||||||||||||||||| Sbjct: 2428929 gctcgcgctgcagctagtc 2428947
>emb|AJ852556.1| Triticum aestivum ltp9.2d gene for type 1 non specific lipid transfer protein precursor Length = 2087 Score = 38.2 bits (19), Expect = 4.7 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 aaatctagccatctcatcatctc 23 ||||||||| ||||||||||||| Sbjct: 1194 aaatctagctatctcatcatctc 1216 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 829,393 Number of Sequences: 3902068 Number of extensions: 829393 Number of successful extensions: 52836 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 21 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 52806 Number of HSP's gapped (non-prelim): 30 length of query: 105 length of database: 17,233,045,268 effective HSP length: 21 effective length of query: 84 effective length of database: 17,151,101,840 effective search space: 1440692554560 effective search space used: 1440692554560 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)