| Clone Name | baet80c12 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | MAM_DROME (P21519) Neurogenic protein mastermind | 29 | 4.0 | 2 | DECA_DROPS (P91699) Protein decapentaplegic precursor (Protein D... | 28 | 5.3 | 3 | IE18_PRVIF (P11675) Immediate-early protein IE180 | 28 | 9.0 | 4 | LFY_ARATH (Q00958) LEAFY protein | 28 | 9.0 | 5 | IE18_PRVKA (P33479) Immediate-early protein IE180 | 28 | 9.0 |
|---|
>MAM_DROME (P21519) Neurogenic protein mastermind| Length = 1594 Score = 28.9 bits (63), Expect = 4.0 Identities = 11/28 (39%), Positives = 18/28 (64%) Frame = -1 Query: 152 GGGGAGEHDSGRGEHEHGQNQQRGDLRG 69 GGGG G +++ G+H Q+QQ+ +G Sbjct: 376 GGGGNGNNNNNGGDHHQQQHQQQQQQQG 403
>DECA_DROPS (P91699) Protein decapentaplegic precursor (Protein DPP-C)| Length = 621 Score = 28.5 bits (62), Expect = 5.3 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 3/50 (6%) Frame = -1 Query: 152 GGGGAGEHDSGRGEHEHGQNQQRGDLRGLH---CSNHL*ALAIDRVRFTW 12 GGGGAGE G G + ++Q+R R H C H +L +D W Sbjct: 487 GGGGAGEGGKGNGGGRNRRHQRRPARRKNHEETCRRH--SLYVDFADVGW 534
>IE18_PRVIF (P11675) Immediate-early protein IE180| Length = 1461 Score = 27.7 bits (60), Expect = 9.0 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = -1 Query: 158 APGGGGAGEHDSGRGEHEH 102 APGGGGA RG H H Sbjct: 249 APGGGGAPSGGGDRGRHHH 267
>LFY_ARATH (Q00958) LEAFY protein| Length = 424 Score = 27.7 bits (60), Expect = 9.0 Identities = 11/23 (47%), Positives = 17/23 (73%) Frame = -1 Query: 152 GGGGAGEHDSGRGEHEHGQNQQR 84 GGGG+G D+G+G+ + Q Q+R Sbjct: 176 GGGGSGYWDAGQGKMKKQQQQRR 198
>IE18_PRVKA (P33479) Immediate-early protein IE180| Length = 1446 Score = 27.7 bits (60), Expect = 9.0 Identities = 11/19 (57%), Positives = 11/19 (57%) Frame = -1 Query: 158 APGGGGAGEHDSGRGEHEH 102 APGGGGA RG H H Sbjct: 241 APGGGGAPSAGGDRGRHHH 259 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 20,056,936 Number of Sequences: 219361 Number of extensions: 268090 Number of successful extensions: 1688 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 1456 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1668 length of database: 80,573,946 effective HSP length: 28 effective length of database: 74,431,838 effective search space used: 1786364112 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)