| Clone Name | baet80c05 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 prot... | 28 | 6.8 |
|---|
>ATX1_HUMAN (P54253) Ataxin-1 (Spinocerebellar ataxia type 1 protein)| Length = 816 Score = 28.1 bits (61), Expect = 6.8 Identities = 15/39 (38%), Positives = 22/39 (56%) Frame = -3 Query: 164 AHLARPTTTDVASALATAIASRTPRTSALVAAMSELLAD 48 + L PT V SA+A+A + TP + + A S LLA+ Sbjct: 145 SQLIPPTANPVTSAVASAAGATTPSQRSQLEAYSTLLAN 183 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.315 0.125 0.362 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 19,817,271 Number of Sequences: 219361 Number of extensions: 232603 Number of successful extensions: 628 Number of sequences better than 10.0: 1 Number of HSP's better than 10.0 without gapping: 617 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 628 length of database: 80,573,946 effective HSP length: 33 effective length of database: 73,335,033 effective search space used: 1760040792 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)