ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet80c05 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194863.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.11), mRNA Length = 591 Score = 58.0 bits (29), Expect = 9e-06 Identities = 50/57 (87%) Strand = Plus / Plus Query: 117 cgccaatgccgaggcaacgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| ||| |||||| |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 54 cgcccatggcgaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcac 110
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 58.0 bits (29), Expect = 9e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 117 cgccaatgccgaggcaacgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| ||| |||||| |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 68563 cgcccatggcgaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcac 68507 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 99186 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 99225 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 88284 gtcgtcggcacggccaagtgcgccgactgcac 88315 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 84447 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 84486 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 81230 gtcgtcggcacggccaagtgcgccgactgcac 81199 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 27290 tcgtcgtcggccaggccaagtgcggcgagtgcac 27257 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 10280 tcgtcgtcggccaggccaagtgcggcgagtgcac 10247 Score = 42.1 bits (21), Expect = 0.55 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 gtcgtcgtcggcctggccaagtgcg 163 |||||||||||| |||||||||||| Sbjct: 58489 gtcgtcgtcggcttggccaagtgcg 58513 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcg 163 ||||||||||| |||||||||||| Sbjct: 49899 tcgtcgtcggcttggccaagtgcg 49876 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgc 171 |||||||||| |||||||||||| ||||||| Sbjct: 18375 tcgtcgtcgggttggccaagtgcggcgactgc 18344 Score = 38.2 bits (19), Expect = 8.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 139 gtcgtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| | ||||||||||| ||| ||||| Sbjct: 35032 gtcgtcgtcggtcaggccaagtgcggcgagtgcac 34998
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 58.0 bits (29), Expect = 9e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 117 cgccaatgccgaggcaacgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| ||| |||||| |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 2980141 cgcccatggcgaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcac 2980085 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 3010764 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 3010803 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 2999862 gtcgtcggcacggccaagtgcgccgactgcac 2999893 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 2996025 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 2996064 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 2992808 gtcgtcggcacggccaagtgcgccgactgcac 2992777 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 2877904 gtcgtcggattggccaagtgcgccgactgcac 2877873 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 2938868 tcgtcgtcggccaggccaagtgcggcgagtgcac 2938835 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 2921828 tcgtcgtcggccaggccaagtgcggcgagtgcac 2921795 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Minus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgc 171 |||| |||||||||||| |||||||||||||| |||| Sbjct: 2902549 cgtcggtcgtcgtcggcgcggccaagtgcgccggctgc 2902512 Score = 42.1 bits (21), Expect = 0.55 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 gtcgtcgtcggcctggccaagtgcg 163 |||||||||||| |||||||||||| Sbjct: 2970067 gtcgtcgtcggcttggccaagtgcg 2970091 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcg 163 ||||||||||| |||||||||||| Sbjct: 2961477 tcgtcgtcggcttggccaagtgcg 2961454 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgc 171 |||||||||| |||||||||||| ||||||| Sbjct: 2929953 tcgtcgtcgggttggccaagtgcggcgactgc 2929922 Score = 38.2 bits (19), Expect = 8.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 139 gtcgtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| | ||||||||||| ||| ||||| Sbjct: 2946610 gtcgtcgtcggtcaggccaagtgcggcgagtgcac 2946576
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 58.0 bits (29), Expect = 9e-06 Identities = 50/57 (87%) Strand = Plus / Minus Query: 117 cgccaatgccgaggcaacgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| ||| |||||| |||| |||||||||||||| |||||||||| ||||||||| Sbjct: 2980062 cgcccatggcgaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcac 2980006 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 3010685 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 3010724 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 2999783 gtcgtcggcacggccaagtgcgccgactgcac 2999814 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 2995946 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 2995985 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 2992729 gtcgtcggcacggccaagtgcgccgactgcac 2992698 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 2877855 gtcgtcggattggccaagtgcgccgactgcac 2877824 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 2938789 tcgtcgtcggccaggccaagtgcggcgagtgcac 2938756 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 2921779 tcgtcgtcggccaggccaagtgcggcgagtgcac 2921746 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Minus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgc 171 |||| |||||||||||| |||||||||||||| |||| Sbjct: 2902500 cgtcggtcgtcgtcggcgcggccaagtgcgccggctgc 2902463 Score = 42.1 bits (21), Expect = 0.55 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 gtcgtcgtcggcctggccaagtgcg 163 |||||||||||| |||||||||||| Sbjct: 2969988 gtcgtcgtcggcttggccaagtgcg 2970012 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcg 163 ||||||||||| |||||||||||| Sbjct: 2961398 tcgtcgtcggcttggccaagtgcg 2961375 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgc 171 |||||||||| |||||||||||| ||||||| Sbjct: 2929874 tcgtcgtcgggttggccaagtgcggcgactgc 2929843 Score = 38.2 bits (19), Expect = 8.6 Identities = 31/35 (88%) Strand = Plus / Minus Query: 139 gtcgtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| | ||||||||||| ||| ||||| Sbjct: 2946531 gtcgtcgtcggtcaggccaagtgcggcgagtgcac 2946497
>ref|NM_194867.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.15), mRNA Length = 690 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 80 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 119
>dbj|AK062795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C07, full insert sequence Length = 862 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 123 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 162
>dbj|AK061299.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E05, full insert sequence Length = 928 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 137 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 176
>dbj|AB055842.1| Oryza sativa OsPRP1 mRNA for proline-rich protein, complete cds Length = 980 Score = 56.0 bits (28), Expect = 4e-05 Identities = 37/40 (92%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||||||||| ||||||||||||||||||||| Sbjct: 137 cgtcggtcgtcgtcggcacggccaagtgcgccgactgcac 176
>ref|NM_194866.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.14), mRNA Length = 690 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 88 gtcgtcggcacggccaagtgcgccgactgcac 119
>ref|NM_194865.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.13), mRNA Length = 690 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 80 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 119
>ref|NM_194864.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.12), mRNA Length = 675 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 88 gtcgtcggcacggccaagtgcgccgactgcac 119
>ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.7), mRNA Length = 816 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 109 gtcgtcggattggccaagtgcgccgactgcac 140
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Minus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 58936 gtcgtcggattggccaagtgcgccgactgcac 58905 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 102860 tcgtcgtcggccaggccaagtgcggcgagtgcac 102827 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Minus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgc 171 |||| |||||||||||| |||||||||||||| |||| Sbjct: 83581 cgtcggtcgtcgtcggcgcggccaagtgcgccggctgc 83544 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Minus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgc 171 |||||||||| |||||||||||| ||||||| Sbjct: 110985 tcgtcgtcgggttggccaagtgcggcgactgc 110954
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| ||||| |||||||||||||| Sbjct: 111 gtcgtcggcctcgccaaatgcgccgactgcac 142
>dbj|AK104542.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B03, full insert sequence Length = 1008 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 125 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 164
>dbj|AK104765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H08, full insert sequence Length = 1080 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK104622.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H10, full insert sequence Length = 1032 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK104398.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D05, full insert sequence Length = 1032 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK104262.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C07, full insert sequence Length = 1030 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK104257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F02, full insert sequence Length = 1010 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 128 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 167
>dbj|AK104236.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G04, full insert sequence Length = 963 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 151 gtcgtcggcacggccaagtgcgccgactgcac 182
>dbj|AK104235.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F12, full insert sequence Length = 972 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 151 gtcgtcggcacggccaagtgcgccgactgcac 182
>dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G01, full insert sequence Length = 1083 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 166 gtcgtcggattggccaagtgcgccgactgcac 197
>dbj|AK072923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146D17, full insert sequence Length = 1015 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 132 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 171
>dbj|AK067147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B06, full insert sequence Length = 1032 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 150 gtcgtcggcacggccaagtgcgccgactgcac 181
>dbj|AK061576.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G10, full insert sequence Length = 1011 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 128 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 167
>dbj|AK061567.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F04, full insert sequence Length = 1080 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK061529.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E01, full insert sequence Length = 976 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 151 gtcgtcggcacggccaagtgcgccgactgcac 182
>dbj|AK059999.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G07, full insert sequence Length = 963 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 151 gtcgtcggcacggccaagtgcgccgactgcac 182
>dbj|AK059996.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F05, full insert sequence Length = 989 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||| ||||||||||||||||||||| Sbjct: 148 gtcgtcggcacggccaagtgcgccgactgcac 179
>dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E08, full insert sequence Length = 1069 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 151 gtcgtcggattggccaagtgcgccgactgcac 182
>dbj|AK058887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C09, full insert sequence Length = 1011 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 128 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 167
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| ||||| |||||||||||||| Sbjct: 111 gtcgtcggcctcgccaaatgcgccgactgcac 142
>gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-rich protein mRNA, complete cds Length = 1061 Score = 48.1 bits (24), Expect = 0.009 Identities = 30/32 (93%) Strand = Plus / Plus Query: 142 gtcgtcggcctggccaagtgcgccgactgcac 173 |||||||| |||||||||||||||||||||| Sbjct: 160 gtcgtcggattggccaagtgcgccgactgcac 191
>dbj|AB071178.1| Oryza sativa (japonica cultivar-group) OsPRP2 mRNA for proline-rich protein 2, complete cds Length = 828 Score = 48.1 bits (24), Expect = 0.009 Identities = 36/40 (90%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgcac 173 |||| |||||| ||||| ||||||||||||||||||||| Sbjct: 80 cgtcggtcgtcatcggcacggccaagtgcgccgactgcac 119
>ref|XM_542191.2| PREDICTED: Canis familiaris similar to Histone-lysine N-methyltransferase, H3 lysine-79 specific (Histone H3-K79 methyltransferase) (H3-K79-HMTase) (DOT1-like protein) (LOC485073), mRNA Length = 6539 Score = 46.1 bits (23), Expect = 0.035 Identities = 23/23 (100%) Strand = Plus / Plus Query: 146 tcggcctggccaagtgcgccgac 168 ||||||||||||||||||||||| Sbjct: 3995 tcggcctggccaagtgcgccgac 4017
>ref|NM_194857.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.5), mRNA Length = 675 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 98 tcgtcgtcggccaggccaagtgcggcgagtgcac 131
>ref|NM_194855.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.13), mRNA Length = 660 Score = 44.1 bits (22), Expect = 0.14 Identities = 31/34 (91%) Strand = Plus / Plus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgcac 173 |||||||||||| ||||||||||| ||| ||||| Sbjct: 83 tcgtcgtcggccaggccaagtgcggcgagtgcac 116
>ref|NM_194852.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.10), mRNA Length = 906 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgc 171 |||| |||||||||||| |||||||||||||| |||| Sbjct: 86 cgtcggtcgtcgtcggcgcggccaagtgcgccggctgc 123
>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16 Length = 348942 Score = 44.1 bits (22), Expect = 0.14 Identities = 22/22 (100%) Strand = Plus / Minus Query: 95 gcgtcctgctggcgatcgccgt 116 |||||||||||||||||||||| Sbjct: 283485 gcgtcctgctggcgatcgccgt 283464
>dbj|AK071590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100N02, full insert sequence Length = 1219 Score = 44.1 bits (22), Expect = 0.14 Identities = 34/38 (89%) Strand = Plus / Plus Query: 134 cgtccgtcgtcgtcggcctggccaagtgcgccgactgc 171 |||| |||||||||||| |||||||||||||| |||| Sbjct: 140 cgtcggtcgtcgtcggcgcggccaagtgcgccggctgc 177
>ref|NM_194861.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.9), mRNA Length = 636 Score = 42.1 bits (21), Expect = 0.55 Identities = 24/25 (96%) Strand = Plus / Plus Query: 139 gtcgtcgtcggcctggccaagtgcg 163 |||||||||||| |||||||||||| Sbjct: 103 gtcgtcgtcggcttggccaagtgcg 127
>ref|XM_525009.1| PREDICTED: Pan troglodytes crumbs homolog 1 (LOC469626), mRNA Length = 4641 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3694 ccacttcacagttcacaccag 3674
>ref|NM_201253.1| Homo sapiens crumbs homolog 1 (Drosophila) (CRB1), mRNA Length = 4950 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3775 ccacttcacagttcacaccag 3755
>emb|AL136322.24| Human DNA sequence from clone RP11-75C23 on chromosome 1q31.2-32.1 Contains part of the CRB1 gene for crumbs homolog 1 (Drosophila), complete sequence Length = 55954 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 17197 ccacttcacagttcacaccag 17177
>emb|AJ748821.1| Homo sapiens mRNA for crumbs homologue 1 (alternative protein) (CRB1 gene), splice variant CRB1-de34 Length = 3885 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3304 ccacttcacagttcacaccag 3284
>gb|AY043325.1| Homo sapiens CRB1 isoform II precursor, mRNA, complete cds Length = 4950 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3775 ccacttcacagttcacaccag 3755
>gb|AY043324.1| Homo sapiens CRB1 isoform I precursor, mRNA, complete cds Length = 5192 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3775 ccacttcacagttcacaccag 3755
>gb|AC020908.7| Homo sapiens chromosome 19 clone CTD-2528A14, complete sequence Length = 174034 Score = 42.1 bits (21), Expect = 0.55 Identities = 27/29 (93%) Strand = Plus / Minus Query: 2 ttcatccatccatcgatctgccacttcac 30 |||||||||||||| |||||||| ||||| Sbjct: 56258 ttcatccatccatccatctgccaattcac 56230
>emb|BX640729.1|HSM806803 Homo sapiens mRNA; cDNA DKFZp686M1686 (from clone DKFZp686M1686); complete cds Length = 9044 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 2642 ccacttcacagttcacaccag 2622
>gb|AF154671.1|AF154671 Homo sapiens CRB1 mRNA, complete cds Length = 4361 Score = 42.1 bits (21), Expect = 0.55 Identities = 21/21 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacaccag 42 ||||||||||||||||||||| Sbjct: 3775 ccacttcacagttcacaccag 3755
>ref|NM_194860.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.8), mRNA Length = 621 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 140 tcgtcgtcggcctggccaagtgcg 163 ||||||||||| |||||||||||| Sbjct: 104 tcgtcgtcggcttggccaagtgcg 127
>ref|NM_194856.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.14), mRNA Length = 627 Score = 40.1 bits (20), Expect = 2.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 140 tcgtcgtcggcctggccaagtgcgccgactgc 171 |||||||||| |||||||||||| ||||||| Sbjct: 98 tcgtcgtcgggttggccaagtgcggcgactgc 129
>gb|AE009072.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 98 of 256 of the complete sequence Length = 11368 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gccgtcgccaatgccgaggc 131 |||||||||||||||||||| Sbjct: 6732 gccgtcgccaatgccgaggc 6751
>ref|XM_543096.2| PREDICTED: Canis familiaris similar to Protein KIAA1510 precursor (LOC485971), mRNA Length = 4218 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 87 cgtcctgggcgtcctgctgg 106 |||||||||||||||||||| Sbjct: 2847 cgtcctgggcgtcctgctgg 2866
>gb|CP000088.1| Thermobifida fusca YX, complete genome Length = 3642249 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 95 gcgtcctgctggcgatcgcc 114 |||||||||||||||||||| Sbjct: 1498966 gcgtcctgctggcgatcgcc 1498985
>emb|CR361551.8| Zebrafish DNA sequence from clone CH211-224M9 in linkage group 1, complete sequence Length = 177606 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatct 20 |||||||||||||||||||| Sbjct: 24232 attcatccatccatcgatct 24213
>ref|NM_001039627.1| Danio rerio insulin-like growth factor 2 receptor (igf2r), mRNA Length = 13125 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatct 20 |||||||||||||||||||| Sbjct: 9278 attcatccatccatcgatct 9259
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome Length = 2841581 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 112 gccgtcgccaatgccgaggc 131 |||||||||||||||||||| Sbjct: 1079088 gccgtcgccaatgccgaggc 1079107
>ref|XM_691766.1| PREDICTED: Danio rerio similar to Protein C21orf5 (LOC568439), mRNA Length = 5250 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 cttcacagttcacaccagcagcag 48 |||||||||||||||||| ||||| Sbjct: 235 cttcacagttcacaccagaagcag 212
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 acttcacagttcacaccagc 43 |||||||||||||||||||| Sbjct: 28331563 acttcacagttcacaccagc 28331582
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 acttcacagttcacaccagcagca 47 |||||||||||||||||| ||||| Sbjct: 2573469 acttcacagttcacaccaccagca 2573446
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome Length = 1669695 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 ttcagacatggcagctacga 79 |||||||||||||||||||| Sbjct: 400268 ttcagacatggcagctacga 400287
>dbj|AP003632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0624B04 Length = 72745 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 acttcacagttcacaccagcagca 47 |||||||||||||||||| ||||| Sbjct: 72671 acttcacagttcacaccaccagca 72648
>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0710H01 Length = 187107 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 24 acttcacagttcacaccagcagca 47 |||||||||||||||||| ||||| Sbjct: 28810 acttcacagttcacaccaccagca 28787
>dbj|AP005411.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0044E16 Length = 153296 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 acttcacagttcacaccagc 43 |||||||||||||||||||| Sbjct: 60369 acttcacagttcacaccagc 60388
>dbj|AP004623.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0705A05 Length = 143765 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 acttcacagttcacaccagc 43 |||||||||||||||||||| Sbjct: 123378 acttcacagttcacaccagc 123397
>emb|AL929119.19| Zebrafish DNA sequence from clone CH211-214G8 in linkage group 20, complete sequence Length = 136176 Score = 40.1 bits (20), Expect = 2.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatct 20 |||||||||||||||||||| Sbjct: 123785 attcatccatccatcgatct 123766
>gb|AC007193.1|AC007193 Homo sapiens chromosome 19, BAC 82621 (CIT-B-139a18), complete sequence Length = 146180 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcca 24 ||||||||||||||| |||||||| Sbjct: 75910 attcatccatccatccatctgcca 75887
>emb|BX511259.14| Zebrafish DNA sequence from clone CH211-125E6 in linkage group 9, complete sequence Length = 182412 Score = 40.1 bits (20), Expect = 2.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 25 cttcacagttcacaccagcagcag 48 |||||||||||||||||| ||||| Sbjct: 120011 cttcacagttcacaccagaagcag 119988
>gb|AC111074.4| Mus musculus chromosome 1, clone RP24-390A1, complete sequence Length = 124758 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 52 gctaataattcagacatgg 70 ||||||||||||||||||| Sbjct: 81203 gctaataattcagacatgg 81221
>gb|AC130604.4| Oryza sativa (japonica cultivar-group) chromosome 5 clone B1155G07, complete sequence Length = 146712 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 61984 cacttcacagttcacacca 62002
>ref|NM_194858.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.6), mRNA Length = 699 Score = 38.2 bits (19), Expect = 8.6 Identities = 31/35 (88%) Strand = Plus / Plus Query: 139 gtcgtcgtcggcctggccaagtgcgccgactgcac 173 ||||||||||| | ||||||||||| ||| ||||| Sbjct: 121 gtcgtcgtcggtcaggccaagtgcggcgagtgcac 155
>gb|AC110173.11| Mus musculus chromosome 8, clone RP24-396D19, complete sequence Length = 136535 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 89393 attcatccatccatccatctgcc 89415
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 141 cgtcgtcggcctggccaag 159 ||||||||||||||||||| Sbjct: 1913256 cgtcgtcggcctggccaag 1913274
>gb|AF448724.1| Sinorhizobium meliloti phage PBC5, complete genome Length = 57416 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 tcgccgtcgccaatgccga 128 ||||||||||||||||||| Sbjct: 33016 tcgccgtcgccaatgccga 33034
>gb|AC108873.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1005_B11, complete sequence Length = 162772 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 141798 cacttcacagttcacacca 141816
>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome Length = 5650368 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 102 gctggcgatcgccgtcgcc 120 ||||||||||||||||||| Sbjct: 3252609 gctggcgatcgccgtcgcc 3252591
>gb|AC139571.2| Mus musculus BAC clone RP24-73K9 from chromosome 15, complete sequence Length = 210089 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 87992 attcatccatccatccatctgcc 87970
>ref|XM_656414.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN3902.2), mRNA Length = 1596 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 tcgccgtcgccaatgccga 128 ||||||||||||||||||| Sbjct: 758 tcgccgtcgccaatgccga 776
>gb|AC005247.2| Homo sapiens PAC clone RP4-740L10 from 7, complete sequence Length = 124096 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 51 agctaataattcagacatg 69 ||||||||||||||||||| Sbjct: 104460 agctaataattcagacatg 104442
>emb|CT009553.4| M.truncatula DNA sequence from clone MTH2-115C19 on chromosome 3, complete sequence Length = 125987 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 86934 cacttcacagttcacacca 86916
>gb|AC129599.3| Mus musculus BAC clone RP23-349A5 from chromosome 8, complete sequence Length = 188426 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 atccatccatcgatctgcc 23 ||||||||||||||||||| Sbjct: 38261 atccatccatcgatctgcc 38279
>gb|AC126805.4| Mus musculus BAC clone RP23-109A15 from 13, complete sequence Length = 177083 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 accagcagcagtcagctaataat 60 ||||||||||| ||||||||||| Sbjct: 56665 accagcagcagacagctaataat 56643
>ref|XM_547379.2| PREDICTED: Canis familiaris similar to crumbs homolog 1 isoform II precursor (LOC490260), mRNA Length = 4401 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 22 ccacttcacagttcacacc 40 ||||||||||||||||||| Sbjct: 853 ccacttcacagttcacacc 835
>gb|AC073424.8| Homo sapiens BAC clone RP11-653O17 from 7, complete sequence Length = 191141 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 32811 attcatccatccatccatctgcc 32833
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 38.2 bits (19), Expect = 8.6 Identities = 25/27 (92%) Strand = Plus / Plus Query: 94 ggcgtcctgctggcgatcgccgtcgcc 120 ||||||||||||||||| |||| |||| Sbjct: 1015786 ggcgtcctgctggcgattgccggcgcc 1015812
>emb|AL450105.17| Human DNA sequence from clone RP11-519C17 on chromosome 9 Contains the 5' UTR of the gene for a novel protein similar to basonuclin (BNC) (FLJ34928) and a CpG island, complete sequence Length = 161506 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 34002 attcatccatccatcgatc 33984
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctgctggcgatcgccgtc 117 ||||||||||||||||||| Sbjct: 3860659 cctgctggcgatcgccgtc 3860641
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 93 gggcgtcctgctggcgatc 111 ||||||||||||||||||| Sbjct: 628219 gggcgtcctgctggcgatc 628201
>emb|AL139820.10| Human DNA sequence from clone RP11-396A24 on chromosome 10 Contains GSSs and STSs, complete sequence Length = 70140 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 43 cagcagtcagctaataatt 61 ||||||||||||||||||| Sbjct: 14871 cagcagtcagctaataatt 14853
>emb|AL133551.13| Human DNA sequence from clone RP11-57G10 on chromosome 10 Contains a ribosomal protein L21 (RPL21) pseudogene, the gene for J-domain containing protein 1 (JDP1), a ribosomal protein L12 (RPL12) pseudogene, a novel pseudogene, the SIRT1 gene for sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae), the 3' end of the gene for a novel protein (KIAA0032) and two CpG island, complete sequence Length = 175940 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ctaataattcagacatggc 71 ||||||||||||||||||| Sbjct: 152320 ctaataattcagacatggc 152338
>emb|AL645469.18| Mouse DNA sequence from clone RP23-340E18 on chromosome 11 Contains the Mylc2a gene for myosin light chain, regulatory A, the Gck gene for glucokinase, a novel gene, the gene for prenylated SNARE protein (Ykt6), the Camk2d gene for calcium/calmodulin-dependent protein kinase II delta and two CpG islands, complete sequence Length = 172356 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 32 gttcacaccagcagcagtc 50 ||||||||||||||||||| Sbjct: 135999 gttcacaccagcagcagtc 136017
>emb|AL607005.3|OSJN00124 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0118P14, complete sequence Length = 158312 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 11829 cacttcacagttcacacca 11847
>emb|AL606610.3|OSJN00045 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E08, complete sequence Length = 106975 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 103974 cacttcacagttcacacca 103992
>emb|BX323015.6| Zebrafish DNA sequence from clone CH211-231H23 in linkage group 4 Contains the gene for a novel protein similar to vertebrate synaptotagmin X (SYT10) and the gene for a novel protein similar to vertebrate DMBT1, complete sequence Length = 149284 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 14495 attcatccatccatccatctgcc 14473
>emb|BX548162.12| Zebrafish DNA sequence from clone DKEYP-90D11 in linkage group 11, complete sequence Length = 180422 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 102314 attcatccatccatcgatc 102332
>emb|BX548077.12| Zebrafish DNA sequence from clone DKEY-11A7 in linkage group 17, complete sequence Length = 242711 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 57 taattcagacatggcagct 75 ||||||||||||||||||| Sbjct: 185072 taattcagacatggcagct 185054
>emb|BX537304.14| Zebrafish DNA sequence from clone CH211-283H6 in linkage group 5, complete sequence Length = 157564 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 11035 attcatccatccatccatctgcc 11013
>emb|BX571707.13| Zebrafish DNA sequence from clone DKEY-93K4 in linkage group 14, complete sequence Length = 170416 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 54654 attcatccatccatcgatc 54636
>gb|AC008821.6| Homo sapiens chromosome 5 clone CTD-2129G21, complete sequence Length = 184111 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 90464 attcatccatccatccatctgcc 90442
>emb|BX296532.7| Zebrafish DNA sequence from clone CH211-281C19 in linkage group 24, complete sequence Length = 155029 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 8 catccatcgatctgccacttcac 30 |||||||| |||||||||||||| Sbjct: 138179 catccatccatctgccacttcac 138201
>emb|BX548163.15| Zebrafish DNA sequence from clone CH211-135J7 in linkage group 10, complete sequence Length = 132400 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 2 ttcatccatccatcgatct 20 ||||||||||||||||||| Sbjct: 117948 ttcatccatccatcgatct 117966
>gb|AC153130.4| Mus musculus BAC clone RP24-252F22 from chromosome 13, complete sequence Length = 186412 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 38 accagcagcagtcagctaataat 60 ||||||||||| ||||||||||| Sbjct: 156935 accagcagcagacagctaataat 156913
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 tcctgctggcgatcgccgt 116 ||||||||||||||||||| Sbjct: 1400391 tcctgctggcgatcgccgt 1400373
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 19949166 cacttcacagttcacacca 19949184
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 25199143 cacttcacagttcacacca 25199161
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 27028604 cacttcacagttcacacca 27028586
>gb|AC008592.4|AC008592 Homo sapiens chromosome 5 clone CTC-576H9, complete sequence Length = 192670 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Minus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 171120 attcatccatccatccatctgcc 171098
>emb|BX323598.9| Zebrafish DNA sequence from clone CH211-196M2 in linkage group 18, complete sequence Length = 197329 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 84554 attcatccatccatcgatc 84536 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 84385 attcatccatccatcgatc 84367
>dbj|AP003795.2| Gallus gallus genomic DNA, chromosome 5, clone:192C9, complete sequence Length = 187259 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 19 ctgccacttcacagttcac 37 ||||||||||||||||||| Sbjct: 64013 ctgccacttcacagttcac 63995
>gb|AE004578.1| Pseudomonas aeruginosa PAO1, section 139 of 529 of the complete genome Length = 11684 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 100 ctgctggcgatcgccgtcg 118 ||||||||||||||||||| Sbjct: 8343 ctgctggcgatcgccgtcg 8325
>gb|AF260753.1|AF260753 Cricetulus griseus plectin mRNA, partial cds Length = 14618 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 85 ctcgtcctgggcgtcctgc 103 ||||||||||||||||||| Sbjct: 2088 ctcgtcctgggcgtcctgc 2070
>gb|AC104521.3| Homo sapiens chromosome 19 clone CTB-157M14, complete sequence Length = 20540 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 11580 attcatccatccatccatctgcc 11602
>dbj|BA000022.2| Synechocystis sp. PCC 6803 DNA, complete genome Length = 3573470 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 98 tcctgctggcgatcgccgt 116 ||||||||||||||||||| Sbjct: 3137166 tcctgctggcgatcgccgt 3137148
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome Length = 7036071 Score = 38.2 bits (19), Expect = 8.6 Identities = 25/27 (92%) Strand = Plus / Minus Query: 103 ctggcgatcgccgtcgccaatgccgag 129 |||||||||||| | |||||||||||| Sbjct: 6377662 ctggcgatcgccatggccaatgccgag 6377636
>dbj|AP004139.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1486_E07 Length = 110494 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 253 cacttcacagttcacacca 235
>dbj|AP005108.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0461B08 Length = 153743 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 81806 cacttcacagttcacacca 81788
>dbj|AP004311.1| Synechocystis sp. PCC 6803 plasmid pSYSA DNA, complete genome Length = 103307 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 99 cctgctggcgatcgccgtc 117 ||||||||||||||||||| Sbjct: 97224 cctgctggcgatcgccgtc 97206
>dbj|AK120583.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013136F06, full insert sequence Length = 1909 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 1416 cacttcacagttcacacca 1398
>dbj|AK101753.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033063E20, full insert sequence Length = 1020 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 23 cacttcacagttcacacca 41 ||||||||||||||||||| Sbjct: 12 cacttcacagttcacacca 30
>emb|CR925798.6| Zebrafish DNA sequence from clone CH211-242E8 in linkage group 18, complete sequence Length = 29430 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 17035 attcatccatccatcgatc 17053 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 16866 attcatccatccatcgatc 16884
>emb|BX465846.14| Zebrafish DNA sequence from clone CH211-215B21 in linkage group 18, complete sequence Length = 109342 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 22341 attcatccatccatcgatc 22359
>emb|BX323550.13| Zebrafish DNA sequence from clone DKEYP-70F9 in linkage group 22, complete sequence Length = 200031 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 1 attcatccatccatcgatc 19 ||||||||||||||||||| Sbjct: 97274 attcatccatccatcgatc 97256
>emb|CR753900.9| Zebrafish DNA sequence from clone CH211-167B13 in linkage group 10, complete sequence Length = 113731 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcatccatccatcgatct 20 ||||||||||||||||||| Sbjct: 7605 ttcatccatccatcgatct 7587
>emb|AL929286.13| Zebrafish DNA sequence from clone CH211-117K10 in linkage group 11, complete sequence Length = 168222 Score = 38.2 bits (19), Expect = 8.6 Identities = 22/23 (95%) Strand = Plus / Plus Query: 1 attcatccatccatcgatctgcc 23 ||||||||||||||| ||||||| Sbjct: 151101 attcatccatccatccatctgcc 151123
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 110 tcgccgtcgccaatgccga 128 ||||||||||||||||||| Sbjct: 2355182 tcgccgtcgccaatgccga 2355200
>emb|BX004877.10| Zebrafish DNA sequence from clone DKEY-7L19 in linkage group 17, complete sequence Length = 249239 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 57 taattcagacatggcagct 75 ||||||||||||||||||| Sbjct: 70412 taattcagacatggcagct 70430
>gb|AC130213.3| Mus musculus BAC clone RP24-68J20 from 8, complete sequence Length = 188287 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 5 atccatccatcgatctgcc 23 ||||||||||||||||||| Sbjct: 153225 atccatccatcgatctgcc 153243
>emb|AL929494.8| Zebrafish DNA sequence from clone CH211-127N19 in linkage group 20, complete sequence Length = 98841 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Minus Query: 2 ttcatccatccatcgatct 20 ||||||||||||||||||| Sbjct: 49312 ttcatccatccatcgatct 49294
>gb|DQ278604.1| Homo sapiens sirtuin (silent mating type information regulation 2 homolog) 1 (S. cerevisiae) (SIRT1) gene, complete cds Length = 36853 Score = 38.2 bits (19), Expect = 8.6 Identities = 19/19 (100%) Strand = Plus / Plus Query: 53 ctaataattcagacatggc 71 ||||||||||||||||||| Sbjct: 20951 ctaataattcagacatggc 20969 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,671,892 Number of Sequences: 3902068 Number of extensions: 1671892 Number of successful extensions: 140763 Number of sequences better than 10.0: 131 Number of HSP's better than 10.0 without gapping: 131 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 138257 Number of HSP's gapped (non-prelim): 2506 length of query: 175 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 153 effective length of database: 17,147,199,772 effective search space: 2623521565116 effective search space used: 2623521565116 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 19 (38.2 bits)
