ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet80b11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds 281 4e-73
2gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein g... 58 1e-05
3emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein 52 6e-04
4emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putat... 52 6e-04
5gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding p... 52 6e-04
6emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chloro... 46 0.039
7dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.039
8dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.039
9dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.039
10dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
11dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
12dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
13dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
14dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clon... 46 0.039
15dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRN... 46 0.039
16dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene... 44 0.15
17gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b ... 44 0.15
18dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-b... 42 0.61
19gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, compl... 40 2.4
20dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.4
21gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ... 40 2.4
22gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome 40 2.4
23emb|AJ628642.1| Streptomyces hygroscopicus subsp. hygroscopicus ... 40 2.4
24gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 38 9.5
25gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome 38 9.5
26gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome 38 9.5
27gb|AF250766.1| Uncultured bacterium pCosAS1 putative urocanate h... 38 9.5
28gb|AC122051.2| Mus musculus BAC clone RP24-459B17 from 18, compl... 38 9.5
29ref|XM_501227.1| Yarrowia lipolytica CLIB122, YALI0B22572g predi... 38 9.5
30gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full... 38 9.5
31emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig... 38 9.5
32emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome... 38 9.5
33emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete ... 38 9.5
34emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 38 9.5
35emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 compl... 38 9.5
36emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete ... 38 9.5
37emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in ... 38 9.5
38gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell... 38 9.5
39gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell... 38 9.5
40gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Pa... 38 9.5
41gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell... 38 9.5
42ref|XM_580136.1| PREDICTED: Rattus norvegicus LOC500934 (LOC5009... 38 9.5
43gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 9.5
44emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMW... 38 9.5
45emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting... 38 9.5
46gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74... 38 9.5
47gb|AE000657.1| Aquifex aeolicus VF5, complete genome 38 9.5
48emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB1... 38 9.5 
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds
          Length = 1044

 Score =  281 bits (142), Expect = 4e-73
 Identities = 166/174 (95%)
 Strand = Plus / Plus

                                                                       
Query: 19  caccaccacagccccactgttagcgagcacgcacaccggacacgcacgagtctccttgaa 78
           |||||||||||||||||| | || ||||||| || |||||||||||||||||| ||||||
Sbjct: 1   caccaccacagccccactctcagagagcacggacgccggacacgcacgagtcttcttgaa 60

                                                                       
Query: 79  gcaatggcgaccaccgcgatggcgctctcctcctcgtccttcgccgggaaggcggtcaag 138
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 61  gcaatggcgaccaccgcgatggcgctctccccctcgtccttcgccgggaaggcggtcaag 120

                                                                 
Query: 139 gacctgccgtcgtcggcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 121 gacctgccgtcgtcggcgctcttcggggaggcgcgcgtcaccatgcgcaagacc 174
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>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds
          Length = 1191

 Score = 58.0 bits (29), Expect = 1e-05
 Identities = 65/77 (84%)
 Strand = Plus / Plus

                                                                       
Query: 79  gcaatggcgaccaccgcgatggcgctctcctcctcgtccttcgccgggaaggcggtcaag 138
           ||||||||| ||||| | ||| | || ||||| |||||||||||||| ||||| ||||||
Sbjct: 198 gcaatggcggccaccaccatgtctctttcctcttcgtccttcgccggcaaggccgtcaag 257

                            
Query: 139 gacctgccgtcgtcggc 155
            || |||| ||||||||
Sbjct: 258 aacttgccctcgtcggc 274
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>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein
          Length = 934

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 38/42 (90%)
 Strand = Plus / Plus

                                                     
Query: 151 tcggcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| || ||||| ||||| |||||||||||||||||||||
Sbjct: 88  tcggctctcttcggtgaggctcgcgtcaccatgcgcaagacc 129
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>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b
           binding protein (cab gene)
          Length = 760

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 44/50 (88%)
 Strand = Plus / Plus

                                                             
Query: 106 tcctcctcgtccttcgccgggaaggcggtcaaggacctgccgtcgtcggc 155
           ||||| |||||||||||||| ||||| |||||| || |||| ||||||||
Sbjct: 20  tcctcttcgtccttcgccggcaaggccgtcaagaacttgccctcgtcggc 69
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>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor
           (Wcab) mRNA, complete cds
          Length = 918

 Score = 52.0 bits (26), Expect = 6e-04
 Identities = 74/90 (82%)
 Strand = Plus / Plus

                                                                       
Query: 103 ctctcctcctcgtccttcgccgggaaggcggtcaaggacctgccgtcgtcggcgcttttc 162
           |||||||||||| |||| ||||| |||||||| ||| |  | || || | ||| || || 
Sbjct: 31  ctctcctcctcgacctttgccggcaaggcggtgaagaatgtaccatctttggctctcttg 90

                                         
Query: 163 ggggaggcgcgcgtcaccatgcgcaagacc 192
           || ||||| |||||||||||||||||||||
Sbjct: 91  ggcgaggcccgcgtcaccatgcgcaagacc 120
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>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding
           protein
          Length = 1664

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 513 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 551
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>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 154      gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
                ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 10793051 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 10793089
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>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
             clone:P0512H04
          Length = 151049

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                    
Query: 154   gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
             ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 16774 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 16812
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>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC
              clone:OSJNBb0085I16
          Length = 141701

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 154    gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
              ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 129669 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 129707
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>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full
           insert sequence
          Length = 1013

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 119 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 157
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>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full
           insert sequence
          Length = 1021

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 162
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>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full
           insert sequence
          Length = 1056

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 126 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 164
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>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full
           insert sequence
          Length = 1235

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 162
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>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full
           insert sequence
          Length = 1045

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 124 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 162
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>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I
           light-harvesting chlorophyll a/b binding protein of
           photosystem II (LHCPII), complete cds
          Length = 1022

 Score = 46.1 bits (23), Expect = 0.039
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                  
Query: 154 gcgcttttcggggaggcgcgcgtcaccatgcgcaagacc 192
           ||||| ||||| ||||||||  |||||||||||||||||
Sbjct: 105 gcgctcttcggcgaggcgcggatcaccatgcgcaagacc 143
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>dbj|AB115771.1| Physcomitrella patens subsp. patens PpLhcb1 gene for
           light-harvesting chlorophyll a/b-binding protein 1,
           complete cds
          Length = 1975

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 167 aggcgcgcgtcaccatgcgcaagacc 192
           |||| |||||||||||||||||||||
Sbjct: 762 aggctcgcgtcaccatgcgcaagacc 787
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>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds
          Length = 1633

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 37/42 (88%)
 Strand = Plus / Plus

                                                     
Query: 97  atggcgctctcctcctcgtccttcgccgggaaggcggtcaag 138
           ||||| ||||||||| | ||| ||| ||||||||||||||||
Sbjct: 407 atggctctctcctccccctccctcgtcgggaaggcggtcaag 448
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>dbj|AB026686.1| Physcomitrella patens mRNA for chlorophyll a/b-binding protein
           precursor, complete cds
          Length = 964

 Score = 42.1 bits (21), Expect = 0.61
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 172 cgcgtcaccatgcgcaagacc 192
           |||||||||||||||||||||
Sbjct: 142 cgcgtcaccatgcgcaagacc 162
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>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence
          Length = 1471779

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 83    tggcgaccaccgcgatggcg 102
             ||||||||||||||||||||
Sbjct: 13528 tggcgaccaccgcgatggcg 13509
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 116     ccttcgccgggaaggcggtc 135
               ||||||||||||||||||||
Sbjct: 3161392 ccttcgccgggaaggcggtc 3161411
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>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 138     ggacctgccgtcgtcggcgc 157
               ||||||||||||||||||||
Sbjct: 3122253 ggacctgccgtcgtcggcgc 3122272
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>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome
          Length = 3551823

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 99     ggcgctctcctcctcgtcct 118
              ||||||||||||||||||||
Sbjct: 584075 ggcgctctcctcctcgtcct 584056
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>emb|AJ628642.1| Streptomyces hygroscopicus subsp. hygroscopicus genomic region of the
            gene cluster for hygromycin B biosynthetis, strain DSM
            40578
          Length = 34921

 Score = 40.1 bits (20), Expect = 2.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 126  gaaggcggtcaaggacctgc 145
            ||||||||||||||||||||
Sbjct: 1406 gaaggcggtcaaggacctgc 1425
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>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 146     cgtcgtcggcgcttttcgg 164
               |||||||||||||||||||
Sbjct: 1109693 cgtcgtcggcgcttttcgg 1109675
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>gb|AE000516.2| Mycobacterium tuberculosis CDC1551, complete genome
          Length = 4403837

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 139     gacctgccgtcgtcggcgc 157
               |||||||||||||||||||
Sbjct: 2443829 gacctgccgtcgtcggcgc 2443847
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>gb|CP000356.1| Sphingopyxis alaskensis RB2256, complete genome
          Length = 3345170

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 89      ccaccgcgatggcgctctc 107
               |||||||||||||||||||
Sbjct: 2594457 ccaccgcgatggcgctctc 2594475
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>gb|AF250766.1| Uncultured bacterium pCosAS1 putative urocanate hydratase (hutU)
           gene, partial cds
          Length = 1196

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 8   atcccgccatacaccacca 26
           |||||||||||||||||||
Sbjct: 329 atcccgccatacaccacca 311
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>gb|AC122051.2| Mus musculus BAC clone RP24-459B17 from 18, complete sequence
          Length = 177747

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 23    accacagccccactgttag 41
             |||||||||||||||||||
Sbjct: 57569 accacagccccactgttag 57587
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>ref|XM_501227.1| Yarrowia lipolytica CLIB122, YALI0B22572g predicted mRNA
          Length = 1824

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 101 cgctctcctcctcgtcctt 119
           |||||||||||||||||||
Sbjct: 217 cgctctcctcctcgtcctt 199
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>gb|BT008959.1| Triticum aestivum clone wdk1c.pk012.i11:fis, full insert mRNA
           sequence
          Length = 1300

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 101 cgctctcctcctcgtcctt 119
           |||||||||||||||||||
Sbjct: 668 cgctctcctcctcgtcctt 650
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>emb|BX842620.1| Neurospora crassa DNA linkage group V BAC contig B11E5
          Length = 191196

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 100    gcgctctcctcctcgtcct 118
              |||||||||||||||||||
Sbjct: 138304 gcgctctcctcctcgtcct 138322
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>emb|BX842579.1| Mycobacterium tuberculosis H37Rv complete genome; segment 8/13
          Length = 348247

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 139   gacctgccgtcgtcggcgc 157
             |||||||||||||||||||
Sbjct: 21656 gacctgccgtcgtcggcgc 21674
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>emb|BX640445.1| Bordetella bronchiseptica strain RB50, complete genome; segment 9/16
          Length = 348706

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 82    atggcgaccaccgcgatgg 100
             |||||||||||||||||||
Sbjct: 36201 atggcgaccaccgcgatgg 36219
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 82     atggcgaccaccgcgatgg 100
              |||||||||||||||||||
Sbjct: 292870 atggcgaccaccgcgatgg 292888
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>emb|BX248341.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 8/14
          Length = 306050

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 139    gacctgccgtcgtcggcgc 157
              |||||||||||||||||||
Sbjct: 220529 gacctgccgtcgtcggcgc 220547
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>emb|AL939111.1|SCO939111 Streptomyces coelicolor A3(2) complete genome; segment 8/29
          Length = 321250

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 142    ctgccgtcgtcggcgcttt 160
              |||||||||||||||||||
Sbjct: 261360 ctgccgtcgtcggcgcttt 261378
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>emb|CR548622.8| Zebrafish DNA sequence from clone DKEY-189A9 in linkage group 11,
             complete sequence
          Length = 137993

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 11    ccgccatacaccaccacagcccc 33
             |||||||||||||||| ||||||
Sbjct: 50748 ccgccatacaccaccaaagcccc 50770
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>gb|AC010017.5| Drosophila melanogaster 3L BAC RP98-2C22 (Roswell Park Cancer Institute
              Drosophila BAC Library) complete sequence
          Length = 182960

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 147    gtcgtcggcgcttttcggg 165
              |||||||||||||||||||
Sbjct: 134220 gtcgtcggcgcttttcggg 134202
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>gb|AC010055.6| Drosophila melanogaster 3L BAC RP98-24H3 (Roswell Park Cancer Institute
             Drosophila BAC Library) complete sequence
          Length = 163098

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 147   gtcgtcggcgcttttcggg 165
             |||||||||||||||||||
Sbjct: 17665 gtcgtcggcgcttttcggg 17647
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>gb|AC006515.7| Homo sapiens 3p22-7 PAC RPCI5-1053D16 (Roswell Park Cancer Institute
             Human PAC Library) complete sequence
          Length = 223542

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 166   gaggcgcgcgtcaccatgc 184
             |||||||||||||||||||
Sbjct: 58948 gaggcgcgcgtcaccatgc 58930
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>gb|AC010170.3| Homo sapiens 3p22-21.3 BAC RPCI11-487J21 (Roswell Park Cancer Institute
              Human BAC Library) complete sequence
          Length = 173977

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 166    gaggcgcgcgtcaccatgc 184
              |||||||||||||||||||
Sbjct: 132189 gaggcgcgcgtcaccatgc 132171
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>ref|XM_580136.1| PREDICTED: Rattus norvegicus LOC500934 (LOC500934), mRNA
          Length = 831

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 84  ggcgaccaccgcgatggcg 102
           |||||||||||||||||||
Sbjct: 670 ggcgaccaccgcgatggcg 688
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 88      accaccgcgatggcgctctcctc 110
               |||||||||||||||| ||||||
Sbjct: 4975502 accaccgcgatggcgccctcctc 4975524
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>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni
          Length = 312

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 31/35 (88%)
 Strand = Plus / Plus

                                              
Query: 77  aagcaatggcgaccaccgcgatggcgctctcctcc 111
           ||||||||||| ||||  | |||||||||||||||
Sbjct: 55  aagcaatggcggccacgaccatggcgctctcctcc 89
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>emb|X12735.1|HVCAB2 Barley Cab-2 gene for major light-harvesting chlorophyll a/b-
           binding protein ( LHCP )
          Length = 1030

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 116 ccttcgccgggaaggcggt 134
           |||||||||||||||||||
Sbjct: 215 ccttcgccgggaaggcggt 233
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>gb|AE003593.2| Drosophila melanogaster chromosome 3L, section 74 of 83 of the complete
              sequence
          Length = 313157

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 147    gtcgtcggcgcttttcggg 165
              |||||||||||||||||||
Sbjct: 267712 gtcgtcggcgcttttcggg 267730
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>gb|AE000657.1| Aquifex aeolicus VF5, complete genome
          Length = 1551335

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 108   ctcctcgtccttcgccgggaagg 130
             ||||||||||||| |||||||||
Sbjct: 51231 ctcctcgtccttctccgggaagg 51209
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>emb|CR382128.1| Yarrowia lipolytica chromosome B of strain CLIB122 of Yarrowia lipolytica
          Length = 3066374

 Score = 38.2 bits (19), Expect = 9.5
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 101     cgctctcctcctcgtcctt 119
               |||||||||||||||||||
Sbjct: 2971764 cgctctcctcctcgtcctt 2971782


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,106,922
Number of Sequences: 3902068
Number of extensions: 1106922
Number of successful extensions: 89645
Number of sequences better than 10.0: 48
Number of HSP's better than 10.0 without gapping: 48
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 88534
Number of HSP's gapped (non-prelim): 1111
length of query: 192
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 170
effective length of database: 17,147,199,772
effective search space: 2915023961240
effective search space used: 2915023961240
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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