| Clone Name | baet80b04 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017085.1| Zea mays clone EL01N0360E12.c mRNA sequence Length = 1383 Score = 274 bits (138), Expect = 1e-70 Identities = 153/158 (96%) Strand = Plus / Plus Query: 74 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 133 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 117 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 176 Query: 134 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 193 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 177 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 236 Query: 194 ccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||| ||||||||||||||||||||||||||| Sbjct: 237 ccgaccaagaccatcaaggtgcccgagggcttcgacta 274
>gb|AY111237.1| Zea mays CL1948_1 mRNA sequence Length = 1481 Score = 274 bits (138), Expect = 1e-70 Identities = 153/158 (96%) Strand = Plus / Plus Query: 74 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 133 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 124 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 183 Query: 134 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 193 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 184 ctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 243 Query: 194 ccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||| ||||||||||||||||||||||||||| Sbjct: 244 ccgaccaagaccatcaaggtgcccgagggcttcgacta 281
>gb|U89897.1|ZMU89897 Zea mays golgi associated protein se-wap41 mRNA, complete cds Length = 1480 Score = 266 bits (134), Expect = 3e-68 Identities = 152/158 (96%) Strand = Plus / Plus Query: 74 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 133 ||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||| Sbjct: 153 acgccgctgctcaaggacgagctcgacatcgtgatcccgacgatccgcaacctcgacttc 212 Query: 134 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 193 || |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 213 ctggagatgtggcgggccttcttccagccctaccacctcatcatcgtgcaggacggcgac 272 Query: 194 ccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||| ||||||||||||||||||||||||||| Sbjct: 273 ccgaccaagaccatcaaggtgcccgagggcttcgacta 310
>ref|NM_194076.2| Oryza sativa (japonica cultivar-group), mRNA Length = 1519 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 126 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 185 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 186 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 245 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 246 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 289
>gb|AC092778.5| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0015G17, complete sequence Length = 158173 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 157167 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 157226 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 157227 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 157286 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 157287 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 157330
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Minus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22191651 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 22191592 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22191591 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 22191532 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 22191531 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 22191488
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Minus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 22184680 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 22184621 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 22184620 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 22184561 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 22184560 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 22184517
>gb|AC090874.9| Oryza sativa chromosome 3 BAC OJ1523_A02 genomic sequence, complete sequence Length = 132987 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 33211 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 33270 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 33271 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 33330 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 33331 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 33374
>gb|AF294725.1|AF294725 Oryza sativa reversibly glycosylated polypeptide mRNA, complete cds Length = 1136 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 61 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 120 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 121 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 180 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 181 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 224
>emb|AJ011078.1|OSA011078 Oryza sativa mRNA for RGP1 protein Length = 1310 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 114 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 173 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 174 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 233 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 234 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 277
>emb|Y18624.1|OSA18624 Oryza sativa mRNA for reversibly glycosylated polypeptide Length = 1384 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 110 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 169 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 170 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 229 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 230 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 273
>dbj|AK098933.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013029G13, full insert sequence Length = 1492 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 130 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 189 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 249 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 250 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 293
>dbj|AK061813.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-040-B03, full insert sequence Length = 1509 Score = 254 bits (128), Expect = 1e-64 Identities = 155/164 (94%) Strand = Plus / Plus Query: 68 ccgtcgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctc 127 |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 129 ccgtcgacgccgctgctcaaggacgagctggacatcgtgatcccgacgatccgcaacctg 188 Query: 128 gacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 187 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 189 gacttcctggagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggac 248 Query: 188 ggcgacccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||||||| |||| || ||||||||||||||||| Sbjct: 249 ggcgacccgaccaagaccatccgcgtccccgagggcttcgacta 292
>emb|Y18626.1|TAE18626 Triticum aestivum mRNA for reversibly glycosylated polypeptide Length = 1393 Score = 242 bits (122), Expect = 4e-61 Identities = 149/158 (94%) Strand = Plus / Plus Query: 74 acgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttc 133 |||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| Sbjct: 121 acgccgctgctcaaggacgagctggacatcgtgatcccgaccatccgcaatctcgacttc 180 Query: 134 ctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcgac 193 |||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 181 ctcgagatgtggcgccccttcttccagccgtaccacctcatcatcgtgcaggacggcgac 240 Query: 194 ccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 || | ||||||||||||||| || |||||||||||||| Sbjct: 241 cccagcaaggtcatcaaggttcctgagggcttcgacta 278
>ref|XM_479089.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1407 Score = 198 bits (100), Expect = 5e-48 Identities = 145/160 (90%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 85 cgacgccgctgctgaaggacgagctggacatcgtgatcccgacgatccgcaacctggact 144 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcg 191 |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 145 tcctggagatgtggaggcccttcttccagccgtaccacctcatcatcgtccaggacggcg 204 Query: 192 acccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 |||| | ||| ||| ||||||||||||||||||||| Sbjct: 205 accccaagaagacgatccgggtgcccgagggcttcgacta 244
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 198 bits (100), Expect = 5e-48 Identities = 145/160 (90%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 24719780 cgacgccgctgctgaaggacgagctggacatcgtgatcccgacgatccgcaacctggact 24719839 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcg 191 |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 24719840 tcctggagatgtggaggcccttcttccagccgtaccacctcatcatcgtccaggacggcg 24719899 Query: 192 acccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 |||| | ||| ||| ||||||||||||||||||||| Sbjct: 24719900 accccaagaagacgatccgggtgcccgagggcttcgacta 24719939
>dbj|AP005175.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0040H10 Length = 132919 Score = 198 bits (100), Expect = 5e-48 Identities = 145/160 (90%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 75717 cgacgccgctgctgaaggacgagctggacatcgtgatcccgacgatccgcaacctggact 75776 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcg 191 |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 75777 tcctggagatgtggaggcccttcttccagccgtaccacctcatcatcgtccaggacggcg 75836 Query: 192 acccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 |||| | ||| ||| ||||||||||||||||||||| Sbjct: 75837 accccaagaagacgatccgggtgcccgagggcttcgacta 75876
>dbj|AK061294.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-D01, full insert sequence Length = 1407 Score = 198 bits (100), Expect = 5e-48 Identities = 145/160 (90%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 ||||||||||||| |||||||||||||||||||| |||||||||||||||||||| |||| Sbjct: 85 cgacgccgctgctgaaggacgagctggacatcgtgatcccgacgatccgcaacctggact 144 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacggcg 191 |||| ||||||||| |||||||||||||||| ||||||||||||||||| |||||||||| Sbjct: 145 tcctggagatgtggaggcccttcttccagccgtaccacctcatcatcgtccaggacggcg 204 Query: 192 acccgaccaaggtcatcaaggtgcccgagggcttcgacta 231 |||| | ||| ||| ||||||||||||||||||||| Sbjct: 205 accccaagaagacgatccgggtgcccgagggcttcgacta 244
>gb|AF005279.1|AF005279 Vigna unguiculata type IIIa membrane protein cp-wap13 mRNA, complete cds Length = 1275 Score = 141 bits (71), Expect = 1e-30 Identities = 98/107 (91%) Strand = Plus / Plus Query: 80 ctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgag 139 ||||| ||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 112 ctgctgaaggacgagctcgacatcgtgatccccacgatccgcaacctcgacttcctcgag 171 Query: 140 atgtggcggcccttcttccagccctaccacctcatcatcgtgcagga 186 ||||||||||| |||||| ||| ||||||||||||||||| ||||| Sbjct: 172 atgtggcggccattcttcgagcagtaccacctcatcatcgttcagga 218
>gb|DQ415921.1| Cleome spinosa clone BAC Cs2, complete sequence Length = 132380 Score = 115 bits (58), Expect = 6e-23 Identities = 103/118 (87%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 |||||||| ||| ||||| ||||| |||||||||||||| |||||||| |||||||| | Sbjct: 25628 cgacgccggcgctgaaggatgagcttgacatcgtcatccccacgatccgaaacctcgatt 25687 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcaggacgg 189 |||||||||||||| |||| || ||||| |||||||| || |||||||| |||||||| Sbjct: 25688 tcctcgagatgtggaggccttttttccaaccctaccatctgatcatcgtccaggacgg 25745
>gb|DQ415920.1| Cleome spinosa clone BAC Cs3, complete sequence Length = 141360 Score = 105 bits (53), Expect = 6e-20 Identities = 80/89 (89%) Strand = Plus / Plus Query: 101 atcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggcccttcttccag 160 ||||||||||| |||||||| |||||||| ||||||||||||||| ||||||| |||||| Sbjct: 2575 atcgtcatccccacgatccgaaacctcgatttcctcgagatgtggaggccctttttccag 2634 Query: 161 ccctaccacctcatcatcgtgcaggacgg 189 |||||||| || ||||| || |||||||| Sbjct: 2635 ccctaccatctgatcattgtccaggacgg 2663
>gb|DQ415922.1| Cleome spinosa clone BAC Cs1, complete sequence Length = 146078 Score = 93.7 bits (47), Expect = 2e-16 Identities = 98/115 (85%) Strand = Plus / Plus Query: 72 cgacgccgctgctcaaggacgagctggacatcgtcatcccgacgatccgcaacctcgact 131 |||||||| ||| ||||| |||| ||||| |||||||| |||||||| |||||||| | Sbjct: 20548 cgacgccggcgctgaaggagcagctcgacattgtcatccccacgatccggaacctcgatt 20607 Query: 132 tcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgcagga 186 |||||||||||||| |||| || ||||| |||||||| || |||||||| ||||| Sbjct: 20608 tcctcgagatgtggaggccgtttttccaaccctaccatctgatcatcgtccagga 20662
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 147 ggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccc 195 |||||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 4299580 ggcccttcttccagccgtaccacctcatcatcgtcctggacggcgaccc 4299628
>dbj|AP005919.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC clone:P0554A06 Length = 165311 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 147 ggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccc 195 |||||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 144801 ggcccttcttccagccgtaccacctcatcatcgtcctggacggcgaccc 144849
>dbj|AK107760.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-133-A08, full insert sequence Length = 730 Score = 73.8 bits (37), Expect = 2e-10 Identities = 46/49 (93%) Strand = Plus / Plus Query: 147 ggcccttcttccagccctaccacctcatcatcgtgcaggacggcgaccc 195 |||||||||||||||| ||||||||||||||||| | |||||||||||| Sbjct: 510 ggcccttcttccagccgtaccacctcatcatcgtcctggacggcgaccc 558
>ref|NM_121569.2| Arabidopsis thaliana RGP2; alpha-1,4-glucan-protein synthase (UDP-forming) AT5G15650 (RGP2) mRNA, complete cds Length = 1530 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 107 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 166 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 167 tttcttcagccttaccatctgatcatcgtccaggacgg 204
>emb|AL391144.1|ATF14F8 Arabidopsis thaliana DNA chromosome 5, BAC clone F14F8 (ESSA project) Length = 96892 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 7865 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 7924 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 7925 tttcttcagccttaccatctgatcatcgtccaggacgg 7962
>gb|AY120691.1| Arabidopsis thaliana AT5g15650/F14F8_30 mRNA, complete cds Length = 1083 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 61 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 120 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 121 tttcttcagccttaccatctgatcatcgtccaggacgg 158
>gb|AY039846.1| Arabidopsis thaliana AT5g15650/F14F8_30 mRNA, complete cds Length = 1411 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 108 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 167 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 168 tttcttcagccttaccatctgatcatcgtccaggacgg 205
>emb|BX831174.1|CNS09ZDG Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS64ZH06 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1341 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 95 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 154 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 155 tttcttcagccttaccatctgatcatcgtccaggacgg 192
>emb|BX830946.1|CNS09YLX Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS40ZH01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1351 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 91 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 150 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 151 tttcttcagccttaccatctgatcatcgtccaggacgg 188
>gb|AF013628.1|AF013628 Arabidopsis thaliana reversibly glycosylated polypeptide-2 (AtRGP) mRNA, complete cds Length = 1401 Score = 60.0 bits (30), Expect = 3e-06 Identities = 81/98 (82%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| ||||||||||||||| |||| Sbjct: 82 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgtggaggcct 141 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 142 tttcttcagccttaccatctgatcatcgtccaggacgg 179
>gb|U31565.1|PSU31565 Pisum sativum reversibly glycosylatable polypeptide (RGP1) mRNA, complete cds Length = 1298 Score = 58.0 bits (29), Expect = 1e-05 Identities = 50/57 (87%) Strand = Plus / Plus Query: 89 gacgagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtgg 145 ||||| || |||||||||||||| |||||||| ||||| || ||||| ||||||||| Sbjct: 58 gacgaactcgacatcgtcatccctacgatccgtaaccttgatttcctggagatgtgg 114
>gb|AF005278.1|AF005278 Vigna unguiculata type IIIa membrane protein cp-wap11 mRNA, complete cds Length = 1461 Score = 56.0 bits (28), Expect = 5e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| |||||||| ||||| || ||| | ||||| || ||| | ||||||||| |||| Sbjct: 116 gagctcgacatcgtgatccccaccatcaggaacctggatttcttggagatgtggaggcca 175 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacggcgaccc 195 ||||||||||| ||||| ||||| || | ||| || |||||||| Sbjct: 176 ttcttccagccttaccatctcattattgcgcaagatggcgaccc 219
>emb|BX830856.1|CNS09ZF4 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS31ZC08 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1348 Score = 54.0 bits (27), Expect = 2e-04 Identities = 57/67 (85%) Strand = Plus / Plus Query: 123 acctcgacttcctcgagatgtggcggcccttcttccagccctaccacctcatcatcgtgc 182 ||||||| ||||||||||||||| |||| || | ||||| ||||| || |||||||| | Sbjct: 116 acctcgatttcctcgagatgtggaggccttttcttcagccttaccatctgatcatcgtcc 175 Query: 183 aggacgg 189 ||||||| Sbjct: 176 aggacgg 182
>gb|AY087476.1| Arabidopsis thaliana clone 35863 mRNA, complete sequence Length = 1396 Score = 52.0 bits (26), Expect = 8e-04 Identities = 80/98 (81%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| || ||||| || ||||| ||| | |||||||| |||||||||||| || |||| Sbjct: 109 gagctcgatatcgtgattccgactatcagaaacctcgatttcctcgagatgaggaggcct 168 Query: 152 ttcttccagccctaccacctcatcatcgtgcaggacgg 189 || | ||||| ||||| || |||||||| |||||||| Sbjct: 169 tttcttcagccttaccatctgatcatcgtccaggacgg 206
>ref|NM_111724.2| Arabidopsis thaliana RGP3 (REVERSIBLY GLYCOSYLATED POLYPEPTIDE 3); alpha-1,4-glucan-protein synthase (UDP-forming) AT3G08900 (RGP3) mRNA, complete cds Length = 1350 Score = 50.1 bits (25), Expect = 0.003 Identities = 55/65 (84%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| || Sbjct: 49 gagctagacattgtgatacctacgattcgaaacctcgacttccttgagatgtggcgacct 108 Query: 152 ttctt 156 ||||| Sbjct: 109 ttctt 113
>gb|AC010871.7|ATAC010871 Arabidopsis thaliana chromosome III BAC T16O11 genomic sequence, complete sequence Length = 80381 Score = 50.1 bits (25), Expect = 0.003 Identities = 55/65 (84%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| || Sbjct: 46878 gagctagacattgtgatacctacgattcgaaacctcgacttccttgagatgtggcgacct 46937 Query: 152 ttctt 156 ||||| Sbjct: 46938 ttctt 46942
>gb|AF034255.2|AF034255 Arabidopsis thaliana reversibly glycosylated polypeptide-3 (RGP) mRNA, complete cds Length = 1374 Score = 50.1 bits (25), Expect = 0.003 Identities = 55/65 (84%) Strand = Plus / Plus Query: 92 gagctggacatcgtcatcccgacgatccgcaacctcgacttcctcgagatgtggcggccc 151 ||||| ||||| || || || ||||| || |||||||||||||| ||||||||||| || Sbjct: 73 gagctagacattgtgatacctacgattcgaaacctcgacttccttgagatgtggcgacct 132 Query: 152 ttctt 156 ||||| Sbjct: 133 ttctt 137
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Minus Query: 42 cccgcctcgccgcgatggccg 62 ||||||||||||||||||||| Sbjct: 665026 cccgcctcgccgcgatggccg 665006
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 0.75 Identities = 21/21 (100%) Strand = Plus / Plus Query: 84 tcaaggacgagctggacatcg 104 ||||||||||||||||||||| Sbjct: 3946131 tcaaggacgagctggacatcg 3946151
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 42.1 bits (21), Expect = 0.75 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgcgatggccgccgccccgtcg 73 ||||||| ||||||||||||||||| Sbjct: 6890673 cgccgcgctggccgccgccccgtcg 6890697
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 42.1 bits (21), Expect = 0.75 Identities = 24/25 (96%) Strand = Plus / Plus Query: 49 cgccgcgatggccgccgccccgtcg 73 ||||||| ||||||||||||||||| Sbjct: 6890552 cgccgcgctggccgccgccccgtcg 6890576
>emb|AL731740.4|CNS08C7P Oryza sativa chromosome 12, . BAC OSJNBb0001P19 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 144563 Score = 42.1 bits (21), Expect = 0.75 Identities = 24/25 (96%) Strand = Plus / Minus Query: 49 cgccgcgatggccgccgccccgtcg 73 ||||||| ||||||||||||||||| Sbjct: 71365 cgccgcgctggccgccgccccgtcg 71341
>ref|XM_475188.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 855 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tggccgccgccccgtcgacgccgc 80 |||||||||| ||||||||||||| Sbjct: 238 tggccgccgcgccgtcgacgccgc 215
>ref|NM_204667.1| Gallus gallus matrix metallopeptidase 9 (gelatinase B, 92kDa gelatinase, 92kDa type IV collagenase) (MMP9), mRNA Length = 2483 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgcctcccccgcctcgccgc 54 |||||||||||||||||||| Sbjct: 2385 tgcctcccccgcctcgccgc 2404
>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence Length = 3587082 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 47 ctcgccgcgatggccgccgc 66 |||||||||||||||||||| Sbjct: 2798409 ctcgccgcgatggccgccgc 2798390
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 48 tcgccgcgatggccgccgcc 67 |||||||||||||||||||| Sbjct: 2305814 tcgccgcgatggccgccgcc 2305795
>ref|XM_513237.1| PREDICTED: Pan troglodytes LOC456667 (LOC456667), mRNA Length = 3361 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 3004 ggccgatcaccgcctgcccg 2985
>gb|AY389569.1| Hyacinthus orientalis reversibly glycosylated polypeptide (RGP) mRNA, partial cds Length = 642 Score = 40.1 bits (20), Expect = 3.0 Identities = 29/32 (90%) Strand = Plus / Plus Query: 200 aaggtcatcaaggtgcccgagggcttcgacta 231 ||||||||||| || |||||||| |||||||| Sbjct: 3 aaggtcatcaatgtccccgagggtttcgacta 34
>gb|AC105773.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1562_H01, complete sequence Length = 88352 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tggccgccgccccgtcgacgccgc 80 |||||||||| ||||||||||||| Sbjct: 80714 tggccgccgcgccgtcgacgccgc 80691
>gb|BC007815.2| Homo sapiens ATP binding domain 1 family, member B, mRNA (cDNA clone MGC:14380 IMAGE:4299794), complete cds Length = 1372 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 173 ggccgatcaccgcctgcccg 154
>gb|BC008634.1| Homo sapiens ATP binding domain 1 family, member B, mRNA (cDNA clone MGC:9656 IMAGE:3463813), complete cds Length = 1398 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 197 ggccgatcaccgcctgcccg 178
>ref|XM_898689.1| PREDICTED: Mus musculus similar to ribosomal protein P1 isoform 2, transcript variant 3 (LOC280121), mRNA Length = 264 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_207492.5| PREDICTED: Mus musculus similar to ribosomal protein P1 isoform 2, transcript variant 1 (LOC280121), mRNA Length = 345 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_987886.1| PREDICTED: Mus musculus similar to ribosomal protein P1 isoform 2, transcript variant 1 (LOC280121), mRNA Length = 264 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_987931.1| PREDICTED: Mus musculus similar to ribosomal protein P1 isoform 2, transcript variant 2 (LOC280121), mRNA Length = 345 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_903787.1| PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P1, transcript variant 4 (LOC280121), mRNA Length = 264 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_359399.3| PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P1, transcript variant 2 (LOC280121), mRNA Length = 345 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_919201.1| PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P1, transcript variant 6 (LOC280121), mRNA Length = 264 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>ref|XM_905161.2| PREDICTED: Mus musculus similar to 60S acidic ribosomal protein P1, transcript variant 5 (LOC280121), mRNA Length = 345 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 63 cacctcatcatcgtgcagga 44
>gb|AY358864.1| Homo sapiens clone DNA145690 AGAA5828 (UNQ5828) mRNA, complete cds Length = 2493 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 240 ggccgatcaccgcctgcccg 221
>gb|BC020272.1| Homo sapiens cDNA clone IMAGE:3544026 Length = 1415 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 216 ggccgatcaccgcctgcccg 197
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 209 aaggtgcccgagggcttcga 228 |||||||||||||||||||| Sbjct: 3262515 aaggtgcccgagggcttcga 3262496
>gb|AC109929.2| Oryza sativa (japonica cultivar-group) chromosome 11 BAC clone OSJNBa0093J03, complete sequence Length = 200626 Score = 40.1 bits (20), Expect = 3.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 cccccgcctcgccgcgatggccgccgcc 67 |||||||||| |||| |||||||||||| Sbjct: 168589 cccccgcctcaccgccatggccgccgcc 168616
>emb|AL034380.26|HS50O24 Human DNA sequence from clone RP1-50O24 on chromosome 1p35.1-35.3 Contains the 3' end of the SMARCF1 gene for SWI/SNF related, matrix associated, actin dependent regulator of chromatin (subfamily f, member 1), a novel gene (FLJ20477), the ZDHHC18 gene for zinc finger, DHHC domain containing 18, the SFN gene for stratifin, two novel genes, a novel gene (FLJ10349), the 3' end of a novel gene (FLJ12455) and two CpG islands, complete sequence Length = 157435 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 6184 ggccgatcaccgcctgcccg 6165
>emb|BX640442.1| Bordetella bronchiseptica strain RB50, complete genome; segment 6/16 Length = 349876 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gccgatcaccgcctgcccgt 26 |||||||||||||||||||| Sbjct: 329688 gccgatcaccgcctgcccgt 329669
>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14 Length = 348014 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 7 gccgatcaccgcctgcccgt 26 |||||||||||||||||||| Sbjct: 242411 gccgatcaccgcctgcccgt 242392
>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12 Length = 349672 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 gccgatcaccgcctgcccgt 26 |||||||||||||||||||| Sbjct: 307660 gccgatcaccgcctgcccgt 307679
>emb|AL805932.4| Mouse DNA sequence from clone RP23-41H11 on chromosome X, complete sequence Length = 107341 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 75638 cacctcatcatcgtgcagga 75657
>gb|AE005834.1| Caulobacter crescentus CB15 section 160 of 359 of the complete genome Length = 10982 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 189 gcgacccgaccaaggtcatc 208 |||||||||||||||||||| Sbjct: 3475 gcgacccgaccaaggtcatc 3494
>emb|CR617892.1| full-length cDNA clone CS0DI036YA19 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1353 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 207 ggccgatcaccgcctgcccg 188
>emb|CR611767.1| full-length cDNA clone CS0DJ009YI04 of T cells (Jurkat cell line) Cot 10-normalized of Homo sapiens (human) Length = 1420 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 240 ggccgatcaccgcctgcccg 221
>dbj|AK022535.1| Homo sapiens cDNA FLJ12473 fis, clone NT2RM1000924, weakly similar to HYPOTHETICAL 39.7 KD PROTEIN C34E10.2 IN CHROMOSOME III Length = 1415 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 236 ggccgatcaccgcctgcccg 217
>gb|AC004873.3| Homo sapiens PAC clone RP4-742P4 from 1, complete sequence Length = 131329 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 76115 ggccgatcaccgcctgcccg 76134
>ref|NM_018066.3| Homo sapiens ATP binding domain 1 family, member B (ATPBD1B), mRNA Length = 1510 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 331 ggccgatcaccgcctgcccg 312
>dbj|AB169665.1| Macaca fascicularis brain cDNA, clone: QccE-15365, similar to human hypothetical protein FLJ10349 (FLJ10349), mRNA, RefSeq: NM_018066.2 Length = 1940 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 244 ggccgatcaccgcctgcccg 225
>gb|AY335563.1| Synthetic construct Homo sapiens hypothetical protein FLJ10349 (FLJ10349) mRNA, partial cds Length = 933 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 6 ggccgatcaccgcctgcccg 25 |||||||||||||||||||| Sbjct: 49 ggccgatcaccgcctgcccg 30
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 cccccgcctcgccgcgatggccgccgcc 67 |||||||||| |||| |||||||||||| Sbjct: 20861528 cccccgcctcaccgccatggccgccgcc 20861555
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 57 tggccgccgccccgtcgacgccgc 80 |||||||||| ||||||||||||| Sbjct: 18775311 tggccgccgcgccgtcgacgccgc 18775288
>gb|AF222690.1|AF222690 Gallus gallus 75 kDa gelatinase mRNA, complete cds Length = 2483 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 35 tgcctcccccgcctcgccgc 54 |||||||||||||||||||| Sbjct: 2385 tgcctcccccgcctcgccgc 2404
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome Length = 9025608 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 208 caaggtgcccgagggcttcg 227 |||||||||||||||||||| Sbjct: 8700256 caaggtgcccgagggcttcg 8700275
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 gcctcccccgcctcgccgcg 55 |||||||||||||||||||| Sbjct: 4640129 gcctcccccgcctcgccgcg 4640148
>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence Length = 2648638 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 74 acgccgctgctcaaggacgagctg 97 ||||||||||||||||||| |||| Sbjct: 1173029 acgccgctgctcaaggacgtgctg 1173006
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.0 Identities = 26/28 (92%) Strand = Plus / Plus Query: 40 cccccgcctcgccgcgatggccgccgcc 67 |||||||||| |||| |||||||||||| Sbjct: 21171763 cccccgcctcaccgccatggccgccgcc 21171790
>gb|AC002406.1|AC002406 Mouse chromosome X BAC B178A13 (Research Genetics mouse BAC library) complete sequence Length = 194985 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cacctcatcatcgtgcagga 186 |||||||||||||||||||| Sbjct: 33350 cacctcatcatcgtgcagga 33331 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,453,412 Number of Sequences: 3902068 Number of extensions: 1453412 Number of successful extensions: 35959 Number of sequences better than 10.0: 86 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 34991 Number of HSP's gapped (non-prelim): 958 length of query: 231 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 209 effective length of database: 17,147,199,772 effective search space: 3583764752348 effective search space used: 3583764752348 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)