>gb|AY108102.1| Zea mays PCO073188 mRNA sequence
          Length = 408

 Score = 75.8 bits (38), Expect = 5e-11
 Identities = 104/126 (82%)
 Strand = Plus / Plus

                                                                       
Query: 108 ggcggtgacgctaatggccacggcggcggaggggtacatcactcagaagacgtgggcagc 167
           |||||||  ||| ||||| |||||| ||||||| | |||| |  |||||||||||   ||
Sbjct: 166 ggcggtggtgctcatggcaacggcgtcggagggcttcatctccaagaagacgtggagcgc 225

                                                                       
Query: 168 catccgccgggcgaaccgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacga 227
           |||||| |||||| |||||| |||||| ||||| || || || ||||||||| |||||||
Sbjct: 226 catccggcgggcggaccgcgacgggcccttcgtggggctggtggtgcccaacgcctacga 285

                 
Query: 228 gatggt 233
           ||||||
Sbjct: 286 gatggt 291

>ref|NM_188605.1| Oryza sativa (japonica cultivar-group), Ozsa8208 predicted mRNA
          Length = 996

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Plus

                                                                       
Query: 121 atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 180
           ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 43  atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 102

                                                                  
Query: 181 aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 232
           |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 103 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 156

>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                           
Query: 121     atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 180
               ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 7187148 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 7187089

                                                                      
Query: 181     aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 232
               |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 7187088 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 7187035

>dbj|AP001859.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0485D09
          Length = 150594

 Score = 73.8 bits (37), Expect = 2e-10
 Identities = 97/115 (84%), Gaps = 4/115 (3%)
 Strand = Plus / Minus

                                                                         
Query: 121   atggccacggcggcggaggggtacatcactcagaagacgtgggcagccatccgccgggcg 180
             ||||| |||||||||||||||| |||| |   |||||||||| | ||| |||| ||||||
Sbjct: 81796 atggcgacggcggcggaggggttcatctcggcgaagacgtggtcggccgtccggcgggcg 81737

                                                                    
Query: 181   aac---cgcgccgggccgttcgtcggcctcgtcgtgcccaacacctacgagatgg 232
             |||   || | |||||||||||| ||| |||||||||||||| ||||||||||||
Sbjct: 81736 aacgaccgtggcgggccgttcgtgggc-tcgtcgtgcccaacgcctacgagatgg 81683

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 27/28 (96%)
 Strand = Plus / Plus

                                           
Query: 193     ccgttcgtcggcctcgtcgtgcccaaca 220
               |||||||||||||||||||| |||||||
Sbjct: 4982931 ccgttcgtcggcctcgtcgtccccaaca 4982958

>gb|AC108761.2| Oryza sativa (japonica cultivar-group) chromosome 9 BAC clone
              OSJNBa0087J09, complete sequence
          Length = 153351

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                            
Query: 107    tggcggtgacgctaatggccacggcggcgg 136
              ||||||| ||||||||||||| ||||||||
Sbjct: 128654 tggcggtcacgctaatggccaaggcggcgg 128683

>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 107      tggcggtgacgctaatggccacggcggcgg 136
                ||||||| ||||||||||||| ||||||||
Sbjct: 18486224 tggcggtcacgctaatggccaaggcggcgg 18486253

>gb|DQ118863.1| Streptomyces fradiae strain NRRL18158 lipopeptide antibiotic A54145
             biosynthetic gene cluster, complete sequence
          Length = 126933

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 122   tggccacggcggcggaggggt 142
             |||||||||||||||||||||
Sbjct: 27070 tggccacggcggcggaggggt 27090

>gb|AC123528.2| Oryza sativa chromosome 11 clone  OSJNBa0078E03, complete sequence
          Length = 149493

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 123    ggccacggcggcggaggggt 142
              ||||||||||||||||||||
Sbjct: 122382 ggccacggcggcggaggggt 122401



 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 123    ggccacggcggcggaggggt 142
              ||||||||||||||||||||
Sbjct: 117551 ggccacggcggcggaggggt 117532

>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 196     ttcgtcggcctcgtcgtgcc 215
               ||||||||||||||||||||
Sbjct: 2901101 ttcgtcggcctcgtcgtgcc 2901082

>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 150     tcagaagacgtgggcagccatccgccgg 177
               ||||||||| |||||| |||||||||||
Sbjct: 3462345 tcagaagacttgggcaaccatccgccgg 3462372

>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence
          Length = 3510148

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 174     ccgggcgaaccgcgccgggc 193
               ||||||||||||||||||||
Sbjct: 2930937 ccgggcgaaccgcgccgggc 2930956

>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 174   ccgggcgaaccgcgccgggc 193
             ||||||||||||||||||||
Sbjct: 58310 ccgggcgaaccgcgccgggc 58329

>emb|BX572600.1| Rhodopseudomonas palustris CGA009 complete genome; segment 8/16
          Length = 349640

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 193    ccgttcgtcggcctcgtcgtgcccaaca 220
              ||||||||||| |||||||| |||||||
Sbjct: 260525 ccgttcgtcgggctcgtcgtccccaaca 260498

>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 174     ccgggcgaaccgcgccgggc 193
               ||||||||||||||||||||
Sbjct: 3903912 ccgggcgaaccgcgccgggc 3903931

>gb|CP000301.1| Rhodopseudomonas palustris BisB18, complete genome
          Length = 5513844

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 180     gaaccgcgccgggccgttcg 199
               ||||||||||||||||||||
Sbjct: 3054010 gaaccgcgccgggccgttcg 3053991

>gb|CP000138.1| Rhizobium etli CFN 42 plasmid p42f, complete sequence
          Length = 642517

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 196    ttcgtcggcctcgtcgtgcc 215
              ||||||||||||||||||||
Sbjct: 294762 ttcgtcggcctcgtcgtgcc 294781

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
               sequence
          Length = 28386948

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     ggccacggcggcggaggggt 142
               ||||||||||||||||||||
Sbjct: 1758208 ggccacggcggcggaggggt 1758227

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 123     ggccacggcggcggaggggt 142
               ||||||||||||||||||||
Sbjct: 1755929 ggccacggcggcggaggggt 1755948

>dbj|AP006360.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT42D17, TM0108,
             complete sequence
          Length = 117124

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 89    tcatggccgtcgtcctcgtg 108
             ||||||||||||||||||||
Sbjct: 55182 tcatggccgtcgtcctcgtg 55201


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,382,599
Number of Sequences: 3902068
Number of extensions: 1382599
Number of successful extensions: 31771
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 31229
Number of HSP's gapped (non-prelim): 539
length of query: 236
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 214
effective length of database: 17,147,199,772
effective search space: 3669500751208
effective search space used: 3669500751208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)