ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet80a01 |
|---|---|
| Clone Library Name | barley_pub |
>CVMT1_OCIBA (Q93WU3) Chavicol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase CVOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase CVOMT1) Length = 356 Score = 46.6 bits (109), Expect = 2e-05 Identities = 24/71 (33%), Positives = 43/71 (60%) Frame = +2 Query: 47 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 226 MA Q+ +++ T+ QL++AQA + H + SM+L+CAI+LGIP + + +L L Sbjct: 1 MALQNMDISLSTE-QLLQAQAHVWNHMYAFANSMSLKCAIQLGIPDILHKHDHPMTLSQL 59 Query: 227 MAALSLPPPKA 259 + A+ + K+ Sbjct: 60 LKAIPINKEKS 70
>7OMT8_MEDSA (O24529) Isoflavone-7-O-methytransferase 8 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 8) (7-IOMT-8) Length = 352 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = +2 Query: 86 AQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPK 256 +++ KAQA L +H ++ SM+L+ A+E+ IP IQ G SL +L++ L +P K Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSK 67
>7OMT6_MEDSA (O22308) Isoflavone-7-O-methytransferase 6 (EC 2.1.1.150)| (Isoflavone-O-methytransferase 6) (7-IOMT-6) Length = 352 Score = 45.8 bits (107), Expect = 3e-05 Identities = 22/57 (38%), Positives = 36/57 (63%) Frame = +2 Query: 86 AQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPK 256 +++ KAQA L +H ++ SM+L+ A+E+ IP IQ G SL +L++ L +P K Sbjct: 11 SEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSK 67
>EOMT1_OCIBA (Q93WU2) Eugenol O-methyltransferase (EC 2.1.1.146) ((Iso)eugenol| O-methyltransferase EOMT1) (S-adenosysl-L-methionine:(Iso)eugenol O-methyltransferase EOMT1) Length = 357 Score = 45.1 bits (105), Expect = 5e-05 Identities = 23/70 (32%), Positives = 41/70 (58%) Frame = +2 Query: 47 MAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDL 226 MA Q +++ T+ QL++AQ + H + SM+L+CAI+LGIP + + G +L L Sbjct: 1 MALQKVDISLSTE-QLLQAQVHVWNHMYAFANSMSLKCAIQLGIPDILHKHGRPMTLSQL 59 Query: 227 MAALSLPPPK 256 + ++ + K Sbjct: 60 LQSIPINKEK 69
>ZRP4_MAIZE (P47917) O-methyltransferase ZRP4 (EC 2.1.1.-) (OMT)| Length = 364 Score = 43.1 bits (100), Expect = 2e-04 Identities = 23/59 (38%), Positives = 34/59 (57%) Frame = +2 Query: 80 TDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSLPPPK 256 TD L+ AQ +L + ++ SMAL+ AI L I AI GG ASL +++ + L P + Sbjct: 9 TDQSLLDAQLELWHTTFAFMKSMALKSAIHLRIADAIHLHGGAASLSQILSKVHLHPSR 67
>4OMT_COPJA (Q9LEL5) 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase| (EC 2.1.1.116) (S-adenosyl-L-methionine:3'-hydroxy-N-methylcoclaurine 4'-O-methyltransferase) (4'-OMT) Length = 350 Score = 33.5 bits (75), Expect = 0.15 Identities = 19/48 (39%), Positives = 26/48 (54%) Frame = +2 Query: 95 IKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAAL 238 IKAQA + + + S+ LRCA+ELGI I +L DL + L Sbjct: 12 IKAQAHVWKIIYGFADSLVLRCAVELGIVDIIDNNNQPMALADLASKL 59
>K1C19_CHICK (O93256) Keratin, type I cytoskeletal 19 (Cytokeratin-19) (CK-19)| (Keratin-19) (K19) (GK-19) Length = 423 Score = 33.1 bits (74), Expect = 0.19 Identities = 24/68 (35%), Positives = 34/68 (50%) Frame = +2 Query: 53 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMA 232 AQ Q M +AQL + +AD++R + Y M ++ +E I T Q L G S L Sbjct: 350 AQIQDMIGSIEAQLAELRADMERQNSEYKMLMDIKTRLEQEIATYRQLLEGQES--QLFG 407 Query: 233 ALSLPPPK 256 +LS P K Sbjct: 408 SLSGSPDK 415
>COOMT_COPJA (Q8H9A8) Columbamine O-methyltransferase (EC 2.1.1.118) (CoOMT)| Length = 351 Score = 32.0 bits (71), Expect = 0.43 Identities = 18/50 (36%), Positives = 26/50 (52%) Frame = +2 Query: 95 IKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPDLMAALSL 244 IKAQA + +H + ++ LR + LGIP I G +L L+ L L Sbjct: 13 IKAQAQVWKHMFGFAETIMLRSTVSLGIPDIIHN-NGPVTLSQLVTHLPL 61
>K1H5_HUMAN (Q92764) Keratin, type I cuticular Ha5 (Hair keratin, type I Ha5)| Length = 425 Score = 30.4 bits (67), Expect = 1.2 Identities = 16/44 (36%), Positives = 24/44 (54%) Frame = +2 Query: 53 AQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPT 184 AQ Q M +AQL + +ADL+R + Y + +R +E I T Sbjct: 323 AQMQCMITNVEAQLAEIRADLERQNQEYQVLLDVRARLECEINT 366
>RPOB_SALTY (P06173) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALTI (Q8Z320) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALPA (Q5PK93) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_SALCH (Q57H69) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_ERWCT (Q6DAN0) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 29.6 bits (65), Expect = 2.1 Identities = 21/68 (30%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>PUR6_PYRAB (Q9UY68) Phosphoribosylaminoimidazole carboxylase catalytic subunit| (EC 4.1.1.21) (AIR carboxylase) (AIRC) Length = 174 Score = 28.9 bits (63), Expect = 3.6 Identities = 15/32 (46%), Positives = 19/32 (59%) Frame = +2 Query: 155 RCAIELGIPTAIQRLGGTASLPDLMAALSLPP 250 R A E GI I GG A LP ++AAL++ P Sbjct: 55 RTAEERGIEVIIAGAGGAAHLPGVLAALTMIP 86
>Y248_CHLMU (Q9PL60) Hypothetical protein TC0248| Length = 601 Score = 28.9 bits (63), Expect = 3.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -1 Query: 230 PSGPATTRCRRGAGSPSGCRARWR 159 PSG T + RR +GS RA+WR Sbjct: 186 PSGRITLKVRRSSGSVKDVRAKWR 209
>RPOB_YERPS (Q66FQ2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.5 bits (62), Expect = 4.7 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ T++ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TSVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>RPOB_YERPE (Q8ZAP5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.5 bits (62), Expect = 4.7 Identities = 20/68 (29%), Positives = 32/68 (47%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ T++ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TSVAKR 720 Query: 200 GGTASLPD 223 GGT D Sbjct: 721 GGTVQYVD 728
>NFRKB_HUMAN (Q6P4R8) Nuclear factor related to kappa-B-binding protein| (DNA-binding protein R kappa-B) Length = 1299 Score = 28.5 bits (62), Expect = 4.7 Identities = 23/94 (24%), Positives = 38/94 (40%), Gaps = 8/94 (8%) Frame = +2 Query: 2 HPIQSPEHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIP 181 H +P H ++ S + PT ++K DL+ T +S A R LG+ Sbjct: 1011 HVTSNPVHAADSPAKASSASAPSSTPTGTTVVKVTPDLKP---TEASSSAFRLMPALGVS 1067 Query: 182 TAIQRLGGTASLPD--------LMAALSLPPPKA 259 A Q+ T + + ++ L + PPKA Sbjct: 1068 VADQKGKSTVASSEAKPAATIRIVQGLGVMPPKA 1101
>U689_HUMAN (Q6UX39) Protein UNQ689/PRO1329 precursor| Length = 209 Score = 28.1 bits (61), Expect = 6.1 Identities = 13/20 (65%), Positives = 13/20 (65%) Frame = +2 Query: 197 LGGTASLPDLMAALSLPPPK 256 LG T SLP L AL LPP K Sbjct: 11 LGSTRSLPQLKPALGLPPTK 30
>RPOB_BUCAI (P57146) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 28.1 bits (61), Expect = 6.1 Identities = 18/65 (27%), Positives = 27/65 (41%) Frame = +2 Query: 8 IQSPEHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTA 187 I PEH +++R +M A Q VPT L+ T M A++ G+ Sbjct: 668 IPFPEHDDANRALMGANMQRQAVPT----------LKTDKPLIGTGMERAVAVDSGVTAV 717 Query: 188 IQRLG 202 +R G Sbjct: 718 AKRSG 722
>ISPE_CORDI (Q6NIA1) 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase (EC| 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl-D-erythritol kinase) Length = 311 Score = 28.1 bits (61), Expect = 6.1 Identities = 25/87 (28%), Positives = 36/87 (41%), Gaps = 8/87 (9%) Frame = +2 Query: 5 PIQSPEHQESDREIMAAQS----QTMTVPTDAQLIKAQADLQRHSLTYLTSMA----LRC 160 P H D+ I+A S VPTDA + QA + + A + Sbjct: 48 PAADDMHDAEDQGIVATLSVSGDSAQAVPTDATNLAWQAAEKMYQAHRRNGGAPAKRVHI 107 Query: 161 AIELGIPTAIQRLGGTASLPDLMAALS 241 AI+ GIP A GG+A +AA++ Sbjct: 108 AIDKGIPVAGGMAGGSADAAATLAAMA 134
>K1C19_MOUSE (P19001) Keratin, type I cytoskeletal 19 (Cytokeratin-19) (CK-19)| (Keratin-19) (K19) Length = 403 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/72 (27%), Positives = 35/72 (48%) Frame = +2 Query: 44 IMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRLGGTASLPD 223 + +Q Q++ +AQL +AD++R + Y M ++ +E I T L G + + Sbjct: 336 VQLSQIQSVISGFEAQLSDVRADIERQNQEYKQLMDIKSRLEQEIATYRSLLEGQEAHYN 395 Query: 224 LMAALSLPPPKA 259 +LP PKA Sbjct: 396 -----NLPTPKA 402
>RPOB_SHISS (Q3YUZ7) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_SHIFL (P0A8V5) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_SHIDS (Q32AF9) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_SHIBS (Q31U10) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_ECOLI (P0A8V2) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_ECOL6 (P0A8V3) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>RPOB_ECO57 (P0A8V4) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP| beta subunit) (Transcriptase beta chain) (RNA polymerase beta subunit) Length = 1342 Score = 27.7 bits (60), Expect = 8.0 Identities = 20/68 (29%), Positives = 31/68 (45%) Frame = +2 Query: 20 EHQESDREIMAAQSQTMTVPTDAQLIKAQADLQRHSLTYLTSMALRCAIELGIPTAIQRL 199 EH +++R +M A Q VPT ++A L T M A++ G+ TA+ + Sbjct: 672 EHDDANRALMGANMQRQAVPT----LRADKPLVG------TGMERAVAVDSGV-TAVAKR 720 Query: 200 GGTASLPD 223 GG D Sbjct: 721 GGVVQYVD 728
>YTUY_AGRVI (P70791) Hypothetical UPF0065 protein in the TAR-I ttuE-ttuC'| intergenic region precursor (ORFY) Length = 346 Score = 27.7 bits (60), Expect = 8.0 Identities = 15/32 (46%), Positives = 17/32 (53%), Gaps = 1/32 (3%) Frame = -1 Query: 257 PWVAEAT-ARPSGPATTRCRRGAGSPSGCRAR 165 PWVA+A + PS P T AG PS AR Sbjct: 41 PWVAQAQDSYPSSPVTIMVPAAAGGPSDTVAR 72
>YRP4_SHVX (Q04583) Hypothetical 42.2 kDa protein in replicase gene 3'region| (ORF4) Length = 380 Score = 27.7 bits (60), Expect = 8.0 Identities = 12/28 (42%), Positives = 17/28 (60%) Frame = -1 Query: 239 TARPSGPATTRCRRGAGSPSGCRARWRT 156 TA P+G A T+ R+G P G ++ RT Sbjct: 84 TAEPTGQAQTQLRQGFDEPDGHKSEQRT 111 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 34,142,689 Number of Sequences: 219361 Number of extensions: 560204 Number of successful extensions: 2698 Number of sequences better than 10.0: 32 Number of HSP's better than 10.0 without gapping: 2483 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2696 length of database: 80,573,946 effective HSP length: 64 effective length of database: 66,534,842 effective search space used: 1596836208 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
