>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete
                sequence
          Length = 22696651

 Score =  121 bits (61), Expect = 1e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                            
Query: 154      cacgtgctgctgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgcc 213
                |||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 19901726 cacgtgctcctcctgccgtacccaagccagggccacgtccacccgatgctccagttcgcc 19901785

                                     
Query: 214      aagcgcctcgcgcaccacggc 234
                ||||||||||||  |||||||
Sbjct: 19901786 aagcgcctcgcgttccacggc 19901806



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                         
Query: 184      ggccacgtccacccgatgctgcagttcgccaagcgcctcgc 224
                ||||||||| ||||| |||| ||||||| ||||||||||||
Sbjct: 19933658 ggccacgtcaacccgctgctccagttcggcaagcgcctcgc 19933698



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                            
Query: 164      tgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgccaagcgcctcg 223
                |||| |||||||| ||||| |||||| || | ||||| || ||||||| |||||||||||
Sbjct: 19927210 tgctcccgtacccgagccaaggccacatcaatccgatcctccagttcggcaagcgcctcg 19927269

                 
Query: 224      c 224
                |
Sbjct: 19927270 c 19927270



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                             
Query: 180      ccagggccacgtccacccgatgctgcagttcgccaagcgcctcgc 224
                |||||||||| || ||||| |||| ||||||| ||||||||||||
Sbjct: 19919423 ccagggccacatcaacccggtgctccagttcggcaagcgcctcgc 19919467

>dbj|AP006173.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0217C03
          Length = 58309

 Score =  121 bits (61), Expect = 1e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                        
Query: 154  cacgtgctgctgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgcc 213
            |||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 8812 cacgtgctcctcctgccgtacccaagccagggccacgtccacccgatgctccagttcgcc 8871

                                 
Query: 214  aagcgcctcgcgcaccacggc 234
            ||||||||||||  |||||||
Sbjct: 8872 aagcgcctcgcgttccacggc 8892



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                      
Query: 184   ggccacgtccacccgatgctgcagttcgccaagcgcctcgc 224
             ||||||||| ||||| |||| ||||||| ||||||||||||
Sbjct: 40744 ggccacgtcaacccgctgctccagttcggcaagcgcctcgc 40784



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                         
Query: 164   tgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgccaagcgcctcg 223
             |||| |||||||| ||||| |||||| || | ||||| || ||||||| |||||||||||
Sbjct: 34296 tgctcccgtacccgagccaaggccacatcaatccgatcctccagttcggcaagcgcctcg 34355

              
Query: 224   c 224
             |
Sbjct: 34356 c 34356



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                          
Query: 180   ccagggccacgtccacccgatgctgcagttcgccaagcgcctcgc 224
             |||||||||| || ||||| |||| ||||||| ||||||||||||
Sbjct: 26509 ccagggccacatcaacccggtgctccagttcggcaagcgcctcgc 26553

>dbj|AK065112.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001O03, full
           insert sequence
          Length = 1843

 Score =  121 bits (61), Expect = 1e-24
 Identities = 76/81 (93%)
 Strand = Plus / Plus

                                                                       
Query: 154 cacgtgctgctgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgcc 213
           |||||||| || |||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 87  cacgtgctcctcctgccgtacccaagccagggccacgtccacccgatgctccagttcgcc 146

                                
Query: 214 aagcgcctcgcgcaccacggc 234
           ||||||||||||  |||||||
Sbjct: 147 aagcgcctcgcgttccacggc 167

>ref|XM_464391.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1615

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 181 cagggccacgtccacccgatgctgcagttcgccaagcgcctcgcg 225
           |||||||||||| |||||||||| | | ||||||||||| |||||
Sbjct: 210 cagggccacgtcaacccgatgctccggctcgccaagcgcatcgcg 254

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                            
Query: 181     cagggccacgtccacccgatgctgcagttcgccaagcgcctcgcg 225
               |||||||||||| |||||||||| | | ||||||||||| |||||
Sbjct: 4890060 cagggccacgtcaacccgatgctccggctcgccaagcgcatcgcg 4890016

>dbj|AP004046.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1145_F01
          Length = 113755

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Minus

                                                          
Query: 181   cagggccacgtccacccgatgctgcagttcgccaagcgcctcgcg 225
             |||||||||||| |||||||||| | | ||||||||||| |||||
Sbjct: 34799 cagggccacgtcaacccgatgctccggctcgccaagcgcatcgcg 34755

>dbj|AP006525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC
            clone:P0498F03
          Length = 54025

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 37/41 (90%)
 Strand = Plus / Plus

                                                     
Query: 184  ggccacgtccacccgatgctgcagttcgccaagcgcctcgc 224
            ||||||||| ||||| |||| ||||||| ||||||||||||
Sbjct: 7806 ggccacgtcaacccgctgctccagttcggcaagcgcctcgc 7846



 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                        
Query: 164  tgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgccaagcgcctcg 223
            |||| |||||||| ||||| |||||| || | ||||| || ||||||| |||||||||||
Sbjct: 1358 tgctcccgtacccgagccaaggccacatcaatccgatcctccagttcggcaagcgcctcg 1417

             
Query: 224  c 224
            |
Sbjct: 1418 c 1418

>dbj|AK121725.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033082A13, full
           insert sequence
          Length = 1654

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 52/61 (85%)
 Strand = Plus / Plus

                                                                       
Query: 164 tgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgccaagcgcctcg 223
           |||| |||||||| ||||| |||||| || | ||||| || ||||||| |||||||||||
Sbjct: 98  tgctcccgtacccgagccaaggccacatcaatccgatcctccagttcggcaagcgcctcg 157

            
Query: 224 c 224
           |
Sbjct: 158 c 158

>dbj|AK105236.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-113-A01, full
           insert sequence
          Length = 1615

 Score = 50.1 bits (25), Expect = 0.003
 Identities = 40/45 (88%)
 Strand = Plus / Plus

                                                        
Query: 181 cagggccacgtccacccgatgctgcagttcgccaagcgcctcgcg 225
           |||||||||||| |||||||||| | | ||||||||||| |||||
Sbjct: 210 cagggccacgtcaacccgatgctccggctcgccaagcgcatcgcg 254

>emb|AJ234637.1|HVU234637 Hordeum vulgare genomic DNA fragment; clone MWG0903.uni
          Length = 405

 Score = 48.1 bits (24), Expect = 0.012
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 178 agccagggccacgtccacccgatg 201
           ||||||||||||||||||||||||
Sbjct: 24  agccagggccacgtccacccgatg 1

>ref|XM_477222.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1618

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 180 ccagggccacgtccacccgatgctgcagttcgcc 213
           |||||||||| || |||||||||||||| |||||
Sbjct: 130 ccagggccacatcaacccgatgctgcagctcgcc 163

>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                                 
Query: 180     ccagggccacgtccacccgatgctgcagttcgcc 213
               |||||||||| || |||||||||||||| |||||
Sbjct: 7932858 ccagggccacatcaacccgatgctgcagctcgcc 7932891

>dbj|AP004382.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0418E08
          Length = 141040

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                               
Query: 180   ccagggccacgtccacccgatgctgcagttcgcc 213
             |||||||||| || |||||||||||||| |||||
Sbjct: 49217 ccagggccacatcaacccgatgctgcagctcgcc 49250

>dbj|AK107239.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-125-F03, full
           insert sequence
          Length = 1618

 Score = 44.1 bits (22), Expect = 0.19
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                             
Query: 180 ccagggccacgtccacccgatgctgcagttcgcc 213
           |||||||||| || |||||||||||||| |||||
Sbjct: 130 ccagggccacatcaacccgatgctgcagctcgcc 163

>ref|XM_429033.1| PREDICTED: Gallus gallus similar to RIKEN cDNA D330012F22 gene
           (LOC431480), partial mRNA
          Length = 967

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 151 ggccacgtgctgctgctgccg 171
           |||||||||||||||||||||
Sbjct: 454 ggccacgtgctgctgctgccg 474

>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome
          Length = 2909809

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 118     gacgcgcaggaagtcgtcacc 138
               |||||||||||||||||||||
Sbjct: 1017588 gacgcgcaggaagtcgtcacc 1017568

>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 113     gcgaggacgcgcaggaagtcg 133
               |||||||||||||||||||||
Sbjct: 4534047 gcgaggacgcgcaggaagtcg 4534067

>dbj|AK064395.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-108-G04, full
           insert sequence
          Length = 1726

 Score = 42.1 bits (21), Expect = 0.77
 Identities = 51/61 (83%)
 Strand = Plus / Plus

                                                                       
Query: 164 tgctgccgtacccaagccagggccacgtccacccgatgctgcagttcgccaagcgcctcg 223
           |||| |||||||| ||||| |||||| || | ||||| || ||||| | |||||||||||
Sbjct: 101 tgctcccgtacccgagccaaggccacatcaatccgatcctccagttaggcaagcgcctcg 160

            
Query: 224 c 224
           |
Sbjct: 161 c 161

>gb|AC126598.13| Mus musculus chromosome 5, clone RP24-486L9, complete sequence
          Length = 168471

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 89     agcaagtagccatggcttct 108
              ||||||||||||||||||||
Sbjct: 162785 agcaagtagccatggcttct 162766

>gb|AC134411.7| Mus musculus chromosome 5, clone RP24-369N6, complete sequence
          Length = 150310

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 89    agcaagtagccatggcttct 108
             ||||||||||||||||||||
Sbjct: 43330 agcaagtagccatggcttct 43311

>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 215     agcgcctcgcgcaccacggc 234
               ||||||||||||||||||||
Sbjct: 3544037 agcgcctcgcgcaccacggc 3544056

>emb|AJ006345.1|HSA6345 Homo sapiens KVLQT1 gene
          Length = 404123

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gggggccacgtgctgctgct 167
              ||||||||||||||||||||
Sbjct: 105671 gggggccacgtgctgctgct 105652

>emb|CR858870.1| Pongo pygmaeus mRNA; cDNA DKFZp469H0810 (from clone DKFZp469H0810)
          Length = 5779

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   ttcaaacttcttagcctccgataa 43
            ||||||||||||||| ||||||||
Sbjct: 4447 ttcaaacttcttagcatccgataa 4470

>dbj|AK123966.1| Homo sapiens cDNA FLJ41972 fis, clone SKNMC2003987
          Length = 2534

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 20   ttcaaacttcttagcctccgataa 43
            ||||||||||||||| ||||||||
Sbjct: 1216 ttcaaacttcttagcatccgataa 1239

>gb|AY296651.1| Glycine max DREB2 gene, complete cds
          Length = 1077

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 150 gggccacgtgctgctgctgc 169
           ||||||||||||||||||||
Sbjct: 388 gggccacgtgctgctgctgc 369

>gb|AC000377.2| Homo sapiens chromosome 11 clone BAC 70i6, complete sequence
          Length = 111293

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 148   gggggccacgtgctgctgct 167
             ||||||||||||||||||||
Sbjct: 58634 gggggccacgtgctgctgct 58615

>gb|AC008151.1| Homo sapiens 3 BAC CITB-243A6 (California Institute of Technology BAC
              Library) complete sequence
          Length = 178242

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 20     ttcaaacttcttagcctccgataa 43
              ||||||||||||||| ||||||||
Sbjct: 153376 ttcaaacttcttagcatccgataa 153353

>gb|AC026161.4|AC026161 Homo sapiens chromosome 3 clone RP11-105K13 map 3p, complete sequence
          Length = 167579

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 20     ttcaaacttcttagcctccgataa 43
              ||||||||||||||| ||||||||
Sbjct: 142203 ttcaaacttcttagcatccgataa 142226

>gb|AF263912.1|AF263912 Streptomyces noursei ATCC 11455 nystatin biosynthetic gene cluster,
             complete sequence
          Length = 123580

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 130   gtcgtcaccggcaccgacgg 149
             ||||||||||||||||||||
Sbjct: 35995 gtcgtcaccggcaccgacgg 36014

>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 209     tcgccaagcgcctcgcgcac 228
               ||||||||||||||||||||
Sbjct: 2939378 tcgccaagcgcctcgcgcac 2939397

>gb|AY961989.1| Homo sapiens RAD18 homolog (S. cerevisiae) (RAD18) gene, complete cds
          Length = 87575

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 20    ttcaaacttcttagcctccgataa 43
             ||||||||||||||| ||||||||
Sbjct: 86963 ttcaaacttcttagcatccgataa 86986

>dbj|AP006463.2| Homo sapiens genomic DNA, chromosome 11 clone:RP11-847E17, complete
              sequence
          Length = 165857

 Score = 40.1 bits (20), Expect = 3.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 148    gggggccacgtgctgctgct 167
              ||||||||||||||||||||
Sbjct: 101035 gggggccacgtgctgctgct 101016


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,986,358
Number of Sequences: 3902068
Number of extensions: 1986358
Number of successful extensions: 44744
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 44340
Number of HSP's gapped (non-prelim): 404
length of query: 236
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 214
effective length of database: 17,147,199,772
effective search space: 3669500751208
effective search space used: 3669500751208
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)