ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet79e11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_479489.1| Oryza sativa (japonica cultivar-group), mRNA 127 1e-26
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 127 1e-26
3dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic D... 127 1e-26
4dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic D... 127 1e-26
5dbj|AK119672.1| Oryza sativa (japonica cultivar-group) cDNA clon... 127 1e-26
6gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 68 9e-09
7dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 68 9e-09
8gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome... 68 9e-09
9dbj|AK109914.1| Oryza sativa (japonica cultivar-group) cDNA clon... 68 9e-09
10gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence 40 2.0
11gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome ... 40 2.0
12gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complet... 40 2.0
13gb|AY884154.1| Synthetic construct circularly permuted covalent ... 40 2.0
14dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 2.0
15ref|XM_465880.1| Oryza sativa (japonica cultivar-group), mRNA 38 7.9
16gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence 38 7.9
17gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, compl... 38 7.9
18gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome... 38 7.9
19gb|AE009047.1| Agrobacterium tumefaciens str. C58 circular chrom... 38 7.9
20gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome... 38 7.9
21gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 38 7.9
22ref|XM_967950.1| PREDICTED: Tribolium castaneum similar to CG319... 38 7.9
23gb|AE008731.1| Salmonella typhimurium LT2, section 39 of 220 of ... 38 7.9
24emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella ty... 38 7.9
25dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, c... 38 7.9
26gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 38 7.9
27gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome 38 7.9
28dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
29dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
30dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
31dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
32dbj|AB191192.1| Pseudomonas putida psald, reg-psald genes for ph... 38 7.9
33gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 38 7.9
34gb|CP000026.1| Salmonella enterica subsp. enterica serovar Parat... 38 7.9
35dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete ge... 38 7.9
36dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
37dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
38dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
39dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic D... 38 7.9
40dbj|AK108093.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
41dbj|AK106436.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
42dbj|AK073398.1| Oryza sativa (japonica cultivar-group) cDNA clon... 38 7.9
43gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi... 38 7.9
44gb|AE017220.1| Salmonella enterica subsp. enterica serovar Chole... 38 7.9
45gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete... 38 7.9 
>ref|XM_479489.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 423

 Score =  127 bits (64), Expect = 1e-26
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcgtgcgtgctcggcggcgccgaggcgaagctcggcaggctggtcgtcagcggcgtcgtg 139
           |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 40  gcgtgcgtgctcggcgccgcagacgcgaagctcggcaggctggtcgtcaccggcgtcgtg 99

                                   
Query: 140 ccgtgcaacaccggcagcctcatc 163
           || |||||||||||||||||||||
Sbjct: 100 ccctgcaacaccggcagcctcatc 123
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  127 bits (64), Expect = 1e-26
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                            
Query: 80       gcgtgcgtgctcggcggcgccgaggcgaagctcggcaggctggtcgtcagcggcgtcgtg 139
                |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 28478393 gcgtgcgtgctcggcgccgcagacgcgaagctcggcaggctggtcgtcaccggcgtcgtg 28478452

                                        
Query: 140      ccgtgcaacaccggcagcctcatc 163
                || |||||||||||||||||||||
Sbjct: 28478453 ccctgcaacaccggcagcctcatc 28478476
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>dbj|AP006268.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0037D09
          Length = 140470

 Score =  127 bits (64), Expect = 1e-26
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                         
Query: 80    gcgtgcgtgctcggcggcgccgaggcgaagctcggcaggctggtcgtcagcggcgtcgtg 139
             |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 44145 gcgtgcgtgctcggcgccgcagacgcgaagctcggcaggctggtcgtcaccggcgtcgtg 44204

                                     
Query: 140   ccgtgcaacaccggcagcctcatc 163
             || |||||||||||||||||||||
Sbjct: 44205 ccctgcaacaccggcagcctcatc 44228
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>dbj|AP004343.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0618H09
          Length = 142306

 Score =  127 bits (64), Expect = 1e-26
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                         
Query: 80    gcgtgcgtgctcggcggcgccgaggcgaagctcggcaggctggtcgtcagcggcgtcgtg 139
             |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 35934 gcgtgcgtgctcggcgccgcagacgcgaagctcggcaggctggtcgtcaccggcgtcgtg 35993

                                     
Query: 140   ccgtgcaacaccggcagcctcatc 163
             || |||||||||||||||||||||
Sbjct: 35994 ccctgcaacaccggcagcctcatc 36017
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>dbj|AK119672.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-156-G07, full
           insert sequence
          Length = 686

 Score =  127 bits (64), Expect = 1e-26
 Identities = 79/84 (94%)
 Strand = Plus / Plus

                                                                       
Query: 80  gcgtgcgtgctcggcggcgccgaggcgaagctcggcaggctggtcgtcagcggcgtcgtg 139
           |||||||||||||||| ||| || ||||||||||||||||||||||||| ||||||||||
Sbjct: 47  gcgtgcgtgctcggcgccgcagacgcgaagctcggcaggctggtcgtcaccggcgtcgtg 106

                                   
Query: 140 ccgtgcaacaccggcagcctcatc 163
           || |||||||||||||||||||||
Sbjct: 107 ccctgcaacaccggcagcctcatc 130
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 67.9 bits (34), Expect = 9e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 106      gaagctcggcaggctggtcgtcagcggcgtcgtgccgtgcaacaccggca 155
                ||||||||||||||| ||||||   |||||||||||||||||||||||||
Sbjct: 12739906 gaagctcggcaggctcgtcgtcgctggcgtcgtgccgtgcaacaccggca 12739857
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 67.9 bits (34), Expect = 9e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                                  
Query: 106      gaagctcggcaggctggtcgtcagcggcgtcgtgccgtgcaacaccggca 155
                ||||||||||||||| ||||||   |||||||||||||||||||||||||
Sbjct: 12736669 gaagctcggcaggctcgtcgtcgctggcgtcgtgccgtgcaacaccggca 12736620
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>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone
             OSJNBb0050D18, complete sequence
          Length = 126350

 Score = 67.9 bits (34), Expect = 9e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                               
Query: 106   gaagctcggcaggctggtcgtcagcggcgtcgtgccgtgcaacaccggca 155
             ||||||||||||||| ||||||   |||||||||||||||||||||||||
Sbjct: 94359 gaagctcggcaggctcgtcgtcgctggcgtcgtgccgtgcaacaccggca 94310
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>dbj|AK109914.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-150-B02, full
           insert sequence
          Length = 1371

 Score = 67.9 bits (34), Expect = 9e-09
 Identities = 46/50 (92%)
 Strand = Plus / Minus

                                                             
Query: 106 gaagctcggcaggctggtcgtcagcggcgtcgtgccgtgcaacaccggca 155
           ||||||||||||||| ||||||   |||||||||||||||||||||||||
Sbjct: 939 gaagctcggcaggctcgtcgtcgctggcgtcgtgccgtgcaacaccggca 890
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>gb|CP000152.1| Burkholderia sp. 383 chromosome 2, complete sequence
          Length = 3587082

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 84      gcgtgctcggcggcgccgag 103
               ||||||||||||||||||||
Sbjct: 2419208 gcgtgctcggcggcgccgag 2419189



 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 80    gcgtgcgtgctcggcggcg 98
             |||||||||||||||||||
Sbjct: 53336 gcgtgcgtgctcggcggcg 53354
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>gb|AC159319.2| Mus musculus BAC clone RP23-37C8 from chromosome 9, complete sequence
          Length = 175636

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 103  ggcgaagctcggcaggctgg 122
            ||||||||||||||||||||
Sbjct: 9526 ggcgaagctcggcaggctgg 9507
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>gb|AC123069.4| Mus musculus BAC clone RP23-23B21 from 9, complete sequence
          Length = 162961

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 103   ggcgaagctcggcaggctgg 122
             ||||||||||||||||||||
Sbjct: 64421 ggcgaagctcggcaggctgg 64440
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>gb|AY884154.1| Synthetic construct circularly permuted covalent streptavidin dimer
           mutant E2 gene, complete cds
          Length = 869

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 90  tcggcggcgccgaggcgaag 109
           ||||||||||||||||||||
Sbjct: 529 tcggcggcgccgaggcgaag 548
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>dbj|AP001885.4| Homo sapiens genomic DNA, chromosome 11 clone:RP11-157K17, complete
              sequence
          Length = 173052

 Score = 40.1 bits (20), Expect = 2.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 87     tgctcggcggcgccgaggcg 106
              ||||||||||||||||||||
Sbjct: 115086 tgctcggcggcgccgaggcg 115105
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>ref|XM_465880.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1030

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 103 ggcgaagctcggcaggctg 121
           |||||||||||||||||||
Sbjct: 572 ggcgaagctcggcaggctg 554
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>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence
          Length = 3694126

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 80     gcgtgcgtgctcggcggcg 98
              |||||||||||||||||||
Sbjct: 594809 gcgtgcgtgctcggcggcg 594827
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>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome
          Length = 3188609

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 91      cggcggcgccgaggcgaag 109
               |||||||||||||||||||
Sbjct: 1267090 cggcggcgccgaggcgaag 1267072
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>gb|AC120988.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBa0017N18, complete sequence
          Length = 156643

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 120   tggtcgtcagcggcgtcgtgccg 142
             |||||| ||||||||||||||||
Sbjct: 39206 tggtcgacagcggcgtcgtgccg 39228
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>gb|AE009047.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 73 of
            256 of the complete sequence
          Length = 11654

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                       
Query: 89   ctcggcggcgccgaggcgaagctcggc 115
            |||||||||||  ||||||||||||||
Sbjct: 1410 ctcggcggcgcgcaggcgaagctcggc 1384
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>gb|AC007858.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone BAC 10A19I,
             complete sequence
          Length = 99587

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 120   tggtcgtcagcggcgtcgtgccg 142
             |||||| ||||||||||||||||
Sbjct: 26478 tggtcgacagcggcgtcgtgccg 26500
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>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 115     caggctggtcgtcagcggc 133
               |||||||||||||||||||
Sbjct: 2192353 caggctggtcgtcagcggc 2192335
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>ref|XM_967950.1| PREDICTED: Tribolium castaneum similar to CG31992-PA, isoform A
            (LOC661812), mRNA
          Length = 3762

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 117  ggctggtcgtcagcggcgtcgtg 139
            ||||||||||| |||||||||||
Sbjct: 3238 ggctggtcgtcggcggcgtcgtg 3260
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>gb|AE008731.1| Salmonella typhimurium LT2, section 39 of 220 of the complete genome
          Length = 23049

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 112   cggcaggctggtcgtcagcggcg 134
             |||||||||||||| ||||||||
Sbjct: 17437 cggcaggctggtcgccagcggcg 17459
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>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18,
             complete chromosome; segment 4/20
          Length = 294050

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 112   cggcaggctggtcgtcagcggcg 134
             |||||||||||||| ||||||||
Sbjct: 41727 cggcaggctggtcgccagcggcg 41749
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>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome
          Length = 4940217

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 84     gcgtgctcggcggcgccga 102
              |||||||||||||||||||
Sbjct: 841157 gcgtgctcggcggcgccga 841175
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 89     ctcggcggcgccgaggcgaagctcggc 115
              |||||||||||  ||||||||||||||
Sbjct: 796733 ctcggcggcgcgcaggcgaagctcggc 796707
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>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 84      gcgtgctcggcggcgccgaggcg 106
               |||||||||||| ||||||||||
Sbjct: 2738789 gcgtgctcggcgtcgccgaggcg 2738811
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 133      cgtcgtgccgtgcaacacc 151
                |||||||||||||||||||
Sbjct: 28169335 cgtcgtgccgtgcaacacc 28169353
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 120      tggtcgtcagcggcgtcgtgccg 142
                |||||| ||||||||||||||||
Sbjct: 28611414 tggtcgacagcggcgtcgtgccg 28611436
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 103      ggcgaagctcggcaggctg 121
                |||||||||||||||||||
Sbjct: 18081748 ggcgaagctcggcaggctg 18081766
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                   
Query: 87       tgctcggcggcgccgaggc 105
                |||||||||||||||||||
Sbjct: 33907141 tgctcggcggcgccgaggc 33907159
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>dbj|AB191192.1| Pseudomonas putida psald, reg-psald genes for phenylserine aldolase,
            regulatinal protein for phenylserine aldolase, complete
            cds
          Length = 4552

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 86   gtgctcggcggcgccgaggcgaa 108
            |||||||||||| ||||||||||
Sbjct: 4254 gtgctcggcggcaccgaggcgaa 4276
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 88      gctcggcggcgccgaggcg 106
               |||||||||||||||||||
Sbjct: 4045981 gctcggcggcgccgaggcg 4045999
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>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
          Length = 4585229

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 112     cggcaggctggtcgtcagcggcg 134
               |||||||||||||| ||||||||
Sbjct: 2063940 cggcaggctggtcgccagcggcg 2063918
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>dbj|BA000043.1| Geobacillus kaustophilus HTA426 DNA, complete genome
          Length = 3544776

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 140     ccgtgcaacaccggcagcc 158
               |||||||||||||||||||
Sbjct: 1927216 ccgtgcaacaccggcagcc 1927234
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>dbj|AP003293.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0691E06
          Length = 166497

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 87     tgctcggcggcgccgaggc 105
              |||||||||||||||||||
Sbjct: 146188 tgctcggcggcgccgaggc 146206
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>dbj|AP003221.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0003D09
          Length = 161970

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 87    tgctcggcggcgccgaggc 105
             |||||||||||||||||||
Sbjct: 38584 tgctcggcggcgccgaggc 38602
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>dbj|AP003766.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0009H10
          Length = 175754

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 133    cgtcgtgccgtgcaacacc 151
              |||||||||||||||||||
Sbjct: 100241 cgtcgtgccgtgcaacacc 100259
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>dbj|AP005066.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
            clone:P0047E05
          Length = 184323

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 103  ggcgaagctcggcaggctg 121
            |||||||||||||||||||
Sbjct: 5149 ggcgaagctcggcaggctg 5167
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>dbj|AK108093.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-139-A05, full
           insert sequence
          Length = 904

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 87  tgctcggcggcgccgaggc 105
           |||||||||||||||||||
Sbjct: 171 tgctcggcggcgccgaggc 189
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>dbj|AK106436.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-103-D02, full
            insert sequence
          Length = 2180

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                   
Query: 120  tggtcgtcagcggcgtcgtgccg 142
            |||||| ||||||||||||||||
Sbjct: 1793 tggtcgacagcggcgtcgtgccg 1815
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>dbj|AK073398.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033045F02, full
           insert sequence
          Length = 1030

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 103 ggcgaagctcggcaggctg 121
           |||||||||||||||||||
Sbjct: 572 ggcgaagctcggcaggctg 554
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>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome
          Length = 4791961

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 112     cggcaggctggtcgtcagcggcg 134
               |||||||||||||| ||||||||
Sbjct: 2180362 cggcaggctggtcgccagcggcg 2180340
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>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67,
              complete genome
          Length = 4755700

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 112    cggcaggctggtcgtcagcggcg 134
              |||||||||||||| ||||||||
Sbjct: 864769 cggcaggctggtcgccagcggcg 864791
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>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome
          Length = 4941439

 Score = 38.2 bits (19), Expect = 7.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 84     gcgtgctcggcggcgccga 102
              |||||||||||||||||||
Sbjct: 871794 gcgtgctcggcggcgccga 871812


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 853,591
Number of Sequences: 3902068
Number of extensions: 853591
Number of successful extensions: 60729
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 58735
Number of HSP's gapped (non-prelim): 1994
length of query: 163
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 141
effective length of database: 17,147,199,772
effective search space: 2417755167852
effective search space used: 2417755167852
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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