ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet79c04 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 118 bits (295), Expect = 5e-27 Identities = 61/64 (95%), Positives = 62/64 (96%) Frame = +3 Query: 3 GGRASSVRPSSHVARAFGVDAAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSG 182 GGRASS RPSSHVARAFGVDA ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSG Sbjct: 17 GGRASSARPSSHVARAFGVDAGARITCSLQSDIREVASKCADAAKMAGFALATSALLVSG 76 Query: 183 ASAE 194 A+AE Sbjct: 77 ATAE 80
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 80.9 bits (198), Expect = 9e-16 Identities = 38/60 (63%), Positives = 51/60 (85%), Gaps = 2/60 (3%) Frame = +3 Query: 21 VRPSSHVARAFGVD--AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 +R +SH+++AFG D A R+TCS+ SD+R++A KC DAAK+AGFALATSAL++SGASAE Sbjct: 24 LRSNSHLSKAFGFDNSTAGRLTCSINSDLRDIAQKCTDAAKLAGFALATSALVISGASAE 83
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 75.5 bits (184), Expect = 4e-14 Identities = 37/59 (62%), Positives = 51/59 (86%), Gaps = 1/59 (1%) Frame = +3 Query: 21 VRPSSHVARAFGVD-AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 +R + V++AFGV+ + R+TCSLQ++I+E+A KC DAAK+AGFALATSAL+VSGA+AE Sbjct: 25 LRSAQSVSKAFGVEQGSGRLTCSLQTEIKELAQKCTDAAKIAGFALATSALVVSGANAE 83
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 74.7 bits (182), Expect = 6e-14 Identities = 36/59 (61%), Positives = 52/59 (88%), Gaps = 1/59 (1%) Frame = +3 Query: 21 VRPSSHVARAFGVD-AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 +R S V++AFG++ +A+R++CSLQ+D+++ A KC DAAK+AGFALATSAL+VSGA+AE Sbjct: 28 LRSSQSVSKAFGLEPSASRLSCSLQTDLKDFAQKCTDAAKIAGFALATSALVVSGANAE 86
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 73.9 bits (180), Expect = 1e-13 Identities = 36/59 (61%), Positives = 50/59 (84%), Gaps = 1/59 (1%) Frame = +3 Query: 21 VRPSSHVARAFGVDAA-ARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 +R + V ++FG+D++ AR+TCSL SD+++ A KC+DAAK+AGFALATSAL+VSGA AE Sbjct: 27 LRSNQTVGKSFGLDSSQARLTCSLHSDLKDFAGKCSDAAKIAGFALATSALVVSGAGAE 85
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 73.6 bits (179), Expect = 1e-13 Identities = 37/59 (62%), Positives = 52/59 (88%), Gaps = 1/59 (1%) Frame = +3 Query: 21 VRPSSHVARAFGVD-AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 +R + V++AFGV+ AAAR+TCSLQ++++++A K DAAK+AGFALATSAL+VSGA+AE Sbjct: 28 LRSAQSVSKAFGVEPAAARLTCSLQTELKDLAQKFTDAAKVAGFALATSALVVSGANAE 86
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 72.0 bits (175), Expect = 4e-13 Identities = 35/62 (56%), Positives = 50/62 (80%), Gaps = 1/62 (1%) Frame = +3 Query: 12 ASSVRPSSHVARAFGVD-AAARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGAS 188 +S +R + V ++FG++ ++AR+TCS QSD ++ KC+DA K+AGFALATSAL+VSGAS Sbjct: 25 SSHLRSTQAVGKSFGLETSSARLTCSFQSDFKDFTGKCSDAVKIAGFALATSALVVSGAS 84 Query: 189 AE 194 AE Sbjct: 85 AE 86
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 72.0 bits (175), Expect = 4e-13 Identities = 35/59 (59%), Positives = 50/59 (84%), Gaps = 1/59 (1%) Frame = +3 Query: 21 VRPSSHVARAFGVDA-AARITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASAE 194 ++ + V++AFG++ A++TCSLQSD +E+A KC +A+K+AGFALATSAL+VSGASAE Sbjct: 24 LKSNQSVSKAFGLEHYGAKVTCSLQSDFKELAHKCVEASKIAGFALATSALVVSGASAE 82
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 69.3 bits (168), Expect = 3e-12 Identities = 34/61 (55%), Positives = 50/61 (81%), Gaps = 3/61 (4%) Frame = +3 Query: 21 VRPSSHVARAFGVDAAA---RITCSLQSDIREVASKCADAAKMAGFALATSALLVSGASA 191 +R + +V +AFGV++A+ R++ SLQSD++E+A+KC DA K+AG ALATSAL+ SGA+A Sbjct: 25 LRSTQNVCKAFGVESASSGGRLSLSLQSDLKELANKCVDATKLAGLALATSALIASGANA 84 Query: 192 E 194 E Sbjct: 85 E 85
>ATN1_PANTR (Q5IS70) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1186 Score = 35.0 bits (79), Expect = 0.054 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S GPPP G+R SPG + PPG + P +P S R+ TPP Sbjct: 628 SPPGPPPYGKRAPSPGAYKTATPPGYK-PGSPPSFRT----GTPP 667
>ATN1_HUMAN (P54259) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1185 Score = 35.0 bits (79), Expect = 0.054 Identities = 20/45 (44%), Positives = 25/45 (55%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S GPPP G+R SPG + PPG + P +P S R+ TPP Sbjct: 627 SPPGPPPYGKRAPSPGAYKTATPPGYK-PGSPPSFRT----GTPP 666
>YD52_SCHPO (Q10307) Hypothetical protein C6C3.02c in chromosome I| Length = 172 Score = 33.9 bits (76), Expect = 0.12 Identities = 22/45 (48%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSAST---LPPGSRAPCNPTSGRSQASAPT 129 +A PPP RR +P RSAST LPP + AP S QA PT Sbjct: 6 SAAPPP---RRAAPARSASTAAALPPRTMAPPPAPSRVQQAPPPT 47
>ZDH18_HUMAN (Q9NUE0) Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger| DHHC domain-containing protein 18) (DHHC-18) Length = 388 Score = 33.9 bits (76), Expect = 0.12 Identities = 18/45 (40%), Positives = 24/45 (53%), Gaps = 5/45 (11%) Frame = +1 Query: 22 CGRRRTSPGRSASTLPPGSRAP---CNPTSGRSQA--SAPTPPRW 141 C ++ SPG + PG+R P +PT G A +AP PPRW Sbjct: 4 CEYQQISPGAAPLPASPGARRPGPAASPTPGPGPAPPAAPAPPRW 48
>DRD4_MOUSE (P51436) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 387 Score = 32.3 bits (72), Expect = 0.35 Identities = 16/41 (39%), Positives = 21/41 (51%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP RTSP S+ S+ PC+P + A+ P PP Sbjct: 253 PPPLPSLRTSPSDSSRPESELSQRPCSPGCLLADAALPQPP 293
>FOXL2_MOUSE (O88470) Forkhead box protein L2 (Pituitary forkhead factor)| (P-Frk) Length = 375 Score = 32.0 bits (71), Expect = 0.46 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPT 129 +AA PPP P A+ PPG +P +P + A APT Sbjct: 300 AAAAPPPA-----PPHHGAAAPPPGQLSPASPATAAPPAPAPT 337
>FOXL2_HUMAN (P58012) Forkhead box protein L2| Length = 376 Score = 32.0 bits (71), Expect = 0.46 Identities = 16/43 (37%), Positives = 21/43 (48%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPT 129 +AA PPP P A+ PPG +P +P + A APT Sbjct: 301 AAAAPPPA-----PPHHGAAAPPPGQLSPASPATAAPPAPAPT 338
>PRP_PIG (Q95JC9) Basic proline-rich protein precursor [Contains:| Proline-rich peptide SP-A (PRP-SP-A); Proline-rich peptide SP-B (PRP-SP-B); Parotid hormone (PH-Ab)] Length = 676 Score = 31.6 bits (70), Expect = 0.60 Identities = 16/43 (37%), Positives = 18/43 (41%) Frame = +1 Query: 7 AGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 AGPPP G P + PPG P P G + A PP Sbjct: 445 AGPPPPGPPSPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 487 Score = 30.4 bits (67), Expect = 1.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 250 GPPPLGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 291 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 614 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 655 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 593 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 634 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 572 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 613 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 551 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 592 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 530 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 571 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 509 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 550 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 488 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 529 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 467 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 508 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 376 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 417 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 355 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 396 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 334 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 375 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 313 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 354 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 292 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 333 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 271 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 312 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 208 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 249 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 187 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 228 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 166 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 207 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 145 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 186 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 124 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 165 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 103 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 144 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/42 (35%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P + PPG P P G + A PP Sbjct: 82 GPPPPGPPPPGPAPPGARPPPGPPPPGPPPPGPAPPGARPPP 123 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/42 (38%), Positives = 17/42 (40%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G P PPG+R P P S P PP Sbjct: 635 GPPPPGPPPPGPA------PPGARPPPGPPPPPPGPSPPRPP 670
>SREC2_HUMAN (Q96GP6) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) (SRECRP-1) Length = 866 Score = 31.2 bits (69), Expect = 0.78 Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 7/53 (13%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPT-------SGRSQASAPTPPR 138 S A P P R+RT +SA T+ GS +PT + +AP+PPR Sbjct: 688 SEAAPSPSKRKRTPSDKSAHTVEHGSPRTRDPTPRPPGLPEEATALAAPSPPR 740
>PRPC_HUMAN (P02810) Salivary acidic proline-rich phosphoprotein 1/2 precursor| (PRP-1/PRP-2) (Parotid proline-rich protein 1/2) (Pr1/Pr2) (Protein C) (Parotid acidic protein) (Pa) (Parotid isoelectric focusing variant protein) (PIF-S) (Parotid double-band Length = 166 Score = 31.2 bits (69), Expect = 0.78 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP GR + P + PP R P G Q P PP Sbjct: 102 PPPQGRPQGPPQQGGHPRPPRGRPQGPPQQGGHQQGPPPPP 142
>TTP_HUMAN (P26651) Tristetraproline (TTP) (Zinc finger protein 36 homolog)| (Zfp-36) (TIS11A protein) (TIS11) (Growth factor-inducible nuclear protein NUP475) (G0/G1 switch regulatory protein 24) Length = 326 Score = 30.8 bits (68), Expect = 1.0 Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 5/50 (10%) Frame = +1 Query: 1 SAAGPPPCGRRRTS-----PGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 +A G PP R+ S GR S PPG P +S S +S+P PP Sbjct: 173 AAPGHPPVLRQSISFSGLPSGRRTSPPPPGLAGPSLSSSSFSPSSSPPPP 222
>IF2_CAUCR (Q9AC25) Translation initiation factor IF-2| Length = 1009 Score = 30.8 bits (68), Expect = 1.0 Identities = 16/45 (35%), Positives = 21/45 (46%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 +AA PPP + +P +A PP P P + R A AP P Sbjct: 144 AAAAPPPVAQAPAAPAPAAPVTPP----PAAPQAPRPVAQAPVAP 184
>ICP4_HHV11 (P08392) Trans-acting transcriptional protein ICP4 (Transcriptional| activator IE175) (Alpha-4 protein) Length = 1298 Score = 30.8 bits (68), Expect = 1.0 Identities = 17/42 (40%), Positives = 23/42 (54%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAP 126 +A+ P GR+R SPG + PPG P P + +S A AP Sbjct: 718 AASAAPREGRKRKSPGPAR---PPGGGGPRPPKTKKSGADAP 756
>LTBP2_HUMAN (Q14767) Latent transforming growth factor beta-binding protein 2| precursor (LTBP-2) Length = 1821 Score = 30.8 bits (68), Expect = 1.0 Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 3/44 (6%) Frame = +1 Query: 16 PPCGRRRTSPGRSASTLPPGSRAPCNPTSG---RSQASAPTPPR 138 PP RR++P P AP P G RS A+ PTPPR Sbjct: 117 PPAQTRRSTPLGQQQPAPRTRAAPALPRLGTPQRSGAAPPTPPR 160
>VRP1_YEAST (P37370) Verprolin| Length = 817 Score = 30.8 bits (68), Expect = 1.0 Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTS-GRSQASAPTPP 135 PPP G TS SAS++P P P S S SAP PP Sbjct: 403 PPPPGAFSTSSALSASSIPLAPLPPPPPPSVATSVPSAPPPP 444
>RSMB_MONDO (Q9TU66) Small nuclear ribonucleoprotein-associated protein B'| (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') Length = 240 Score = 30.4 bits (67), Expect = 1.3 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG A PPG R P P G Sbjct: 176 PPPMGRGAPPPGMMAP--PPGMRPPMGPPMG 204
>WIRE_MOUSE (Q6PEV3) WIP-related protein (WASP-interacting protein-related| protein) Length = 440 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 16 PPCGRRRTSPGRSASTLPPGSRAPCNPTSGRS----QASAPTPP 135 PP +R PGR PP + P +P + R+ Q+ AP PP Sbjct: 210 PPTPGQRLHPGREGHPAPPPVKPPPSPVNIRTGPSGQSLAPPPP 253
>WIRE_HUMAN (Q8TF74) WIP-related protein (WASP-interacting protein-related| protein) (WIP-and CR16-homologous protein) Length = 440 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%) Frame = +1 Query: 16 PPCGRRRTSPGRSASTLPPGSRAPCNPTSGRS----QASAPTPP 135 PP +R PGR PP + P +P + R+ Q+ AP PP Sbjct: 210 PPTPGQRLHPGREGPPAPPPVKPPPSPVNIRTGPSGQSLAPPPP 253
>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4| (Transcription initiation factor TFIID 135 kDa subunit) (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130) (TAFII130) Length = 1085 Score = 30.4 bits (67), Expect = 1.3 Identities = 16/45 (35%), Positives = 18/45 (40%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 +A PPP GR R G PP R P P A+ PP Sbjct: 85 AAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPP 129
>EXTN_SORBI (P24152) Extensin precursor (Proline-rich glycoprotein)| Length = 283 Score = 30.4 bits (67), Expect = 1.3 Identities = 14/40 (35%), Positives = 18/40 (45%) Frame = +1 Query: 16 PPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PP + T P + S PP ++ P PT PTPP Sbjct: 106 PPPPKASTPPTYTPSPKPPATKPPTYPTPKPPATKPPTPP 145
>KLF13_HUMAN (Q9Y2Y9) Krueppel-like factor 13 (Transcription factor BTEB3)| (Basic transcription element-binding protein 3) (BTE-binding protein 3) (RANTES factor of late activated T-lymphocytes 1) (RFLAT-1) (Transcription factor NSLP1) (Novel Sp1-like zin Length = 288 Score = 30.4 bits (67), Expect = 1.3 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 3/49 (6%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSAST---LPPGSRAPCNPTSGRSQASAPTPPRW 141 A P P RR + R A T LPP + P +P A+AP P W Sbjct: 75 APAPAPAERREGAAARKARTPCRLPPPAPEPTSP-GAEGAAAAPPSPAW 122
>PG34_MYCTU (Q50594) Hypothetical PE-PGRS family protein PE_PGRS34| Length = 515 Score = 30.0 bits (66), Expect = 1.7 Identities = 19/51 (37%), Positives = 21/51 (41%) Frame = -2 Query: 167 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGG 15 G G G AG GG G L G G P G+ D GD R +GG Sbjct: 228 GLGKAGFAGGAGGTGGTGGLLYGNGGNGGNVPSGAADGGAGGDARLIGNGG 278
>WASIP_HUMAN (O43516) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) (PRPL-2 protein) Length = 503 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/41 (34%), Positives = 20/41 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP G R + + PP + P P++ R AS+ PP Sbjct: 268 PPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPP 308 Score = 28.1 bits (61), Expect = 6.6 Identities = 14/32 (43%), Positives = 14/32 (43%) Frame = +1 Query: 40 SPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 SPGRS PP S P P S P PP Sbjct: 350 SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 381
>TXLNA_HUMAN (P40222) Alpha-taxilin| Length = 546 Score = 30.0 bits (66), Expect = 1.7 Identities = 14/37 (37%), Positives = 20/37 (54%) Frame = +1 Query: 28 RRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 RR PG A + P + APC P + ++AS T P+ Sbjct: 503 RRPEGPGAQAPSSPRVTEAPCYPGAPSTEASGQTGPQ 539
>PERT_CANFA (Q8HYB7) Thyroid peroxidase precursor (EC 1.11.1.8) (TPO)| Length = 933 Score = 30.0 bits (66), Expect = 1.7 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 4/45 (8%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPP----GSRAPCNPTSGRSQASAPTP 132 G PP GR G S S +PP G +PTS RS + +P Sbjct: 888 GAPPPGRGAGQDGASGSLVPPLGPQGRTRAVDPTSSRSHVAQGSP 932
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 30.0 bits (66), Expect = 1.7 Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 6/57 (10%) Frame = -2 Query: 161 GCEGEAGHLGGVGAL-----ACDLPDVGLQGAR-DPGGSVDAERPGDVRRRPHGGGP 9 G +GE GH+G +G + A + D GL G + PG D PG + H G P Sbjct: 1397 GPKGEKGHIGLIGLIGPPGEAGEKGDQGLPGVQGPPGPKGDPGPPGPIGSLGHPGPP 1453
>SRRM1_HUMAN (Q8IYB3) Serine/arginine repetitive matrix protein 1| (Ser/Arg-related nuclear matrix protein) (SR-related nuclear matrix protein of 160 kDa) (SRm160) Length = 904 Score = 30.0 bits (66), Expect = 1.7 Identities = 15/37 (40%), Positives = 20/37 (54%) Frame = +1 Query: 28 RRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 RRR SP RSAS P + +P R ++ +P P R Sbjct: 520 RRRHSPSRSASPSPRKRQKETSPRGRRRRSPSPPPTR 556
>NCOR2_HUMAN (Q9Y618) Nuclear receptor corepressor 2 (N-CoR2) (Silencing| mediator of retinoic acid and thyroid hormone receptor) (SMRT) (SMRTe) (Thyroid-, retinoic-acid-receptor-associated corepressor) (T3 receptor-associating factor) (TRAC) (CTG repeat p Length = 2517 Score = 29.6 bits (65), Expect = 2.3 Identities = 19/44 (43%), Positives = 20/44 (45%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 A GPPP T P R+ SRAP PT APTPP Sbjct: 775 ADGPPP--GPPTPPRRT-------SRAPIEPTPASEATGAPTPP 809
>PRP2_RAT (P10164) Acidic proline-rich protein PRP25 precursor (Fragment)| Length = 172 Score = 29.6 bits (65), Expect = 2.3 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 3/45 (6%) Frame = +1 Query: 10 GPPPCG---RRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G ++ PG+ PPG P +G+ Q P PP Sbjct: 108 GPPPPGGPQKKPPQPGKPQGPTPPGGPQQKPPQAGKPQ--GPPPP 150 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 2/43 (4%) Frame = +1 Query: 13 PPPCGRRR--TSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP G ++ PG+ PPG P G+ Q PTPP Sbjct: 91 PPPGGPQKKPPQPGKPQGPPPPGGPQKKPPQPGKPQ--GPTPP 131
>FOXC1_HUMAN (Q12948) Forkhead box protein C1 (Forkhead-related protein FKHL7)| (Forkhead-related transcription factor 3) (FREAC-3) Length = 553 Score = 29.6 bits (65), Expect = 2.3 Identities = 19/55 (34%), Positives = 24/55 (43%) Frame = -2 Query: 167 GRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 3 G G G AG GG G C+L + L A ER G ++ P G G +A Sbjct: 377 GGGGAGAAGGAGGAGTYHCNLQAMSLYAA--------GERGGHLQGAPGGAGGSA 423
>ATN1_RAT (P54258) Atrophin-1 (Dentatorubral-pallidoluysian atrophy protein)| Length = 1183 Score = 29.6 bits (65), Expect = 2.3 Identities = 18/45 (40%), Positives = 23/45 (51%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S GPP +R SPG + PPG + P +P S R+ TPP Sbjct: 625 SPPGPPQYSKRAPSPGSYKTATPPGYK-PGSPPSFRT----GTPP 664 Score = 29.3 bits (64), Expect = 3.0 Identities = 19/46 (41%), Positives = 20/46 (43%), Gaps = 4/46 (8%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGS----RAPCNPTSGRSQASAPTPP 135 G PP G R TSP T PGS P P S +S P PP Sbjct: 661 GTPP-GYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSSLSSLPPPP 705
>RSMN_RAT (P63164) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) Length = 240 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG A PPG R P P G Sbjct: 176 PPPVGRATPPPGIMAP--PPGMRPPMGPPIG 204
>RSMN_MOUSE (P63163) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific splicing protein) Length = 240 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG A PPG R P P G Sbjct: 176 PPPVGRATPPPGIMAP--PPGMRPPMGPPIG 204
>RSMN_HUMAN (P63162) Small nuclear ribonucleoprotein-associated protein N| (snRNP-N) (Sm protein N) (Sm-N) (SmN) (Sm-D) (Tissue-specific splicing protein) Length = 240 Score = 29.6 bits (65), Expect = 2.3 Identities = 15/31 (48%), Positives = 15/31 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG A PPG R P P G Sbjct: 176 PPPVGRATPPPGIMAP--PPGMRPPMGPPIG 204
>IGSF8_MOUSE (Q8R366) Immunoglobulin superfamily member 8 precursor (CD81| partner 3) (Glu-Trp-Ile EWI motif containing protein 2) (EWI-2) (Keratinocytes-associated transmembrane protein 4) (KCT-4) (Prostaglandin regulatory-like protein) (CD316 antigen) Length = 611 Score = 29.6 bits (65), Expect = 2.3 Identities = 24/59 (40%), Positives = 25/59 (42%), Gaps = 2/59 (3%) Frame = -2 Query: 179 RDEEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAE--RPGDVRRRPHGGGP 9 R EEG G A +GGVG V G R GG V E P R R HG GP Sbjct: 481 RPEEGELSSGPAQLVGGVGQ-----DGVAELGVRPGGGPVSVELVGPRSHRLRLHGLGP 534
>BCB2_ARATH (O80517) Uclacyanin-2 precursor (Uclacyanin-II) (Blue| copper-binding protein II) (BCB II) (Phytocyanin 2) Length = 202 Score = 29.3 bits (64), Expect = 3.0 Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 4/49 (8%) Frame = +1 Query: 4 AAGPPPCGRRRTS-PGRSASTLPP---GSRAPCNPTSGRSQASAPTPPR 138 +AGPP +S PG + P GS P PT G S P PP+ Sbjct: 128 SAGPPATPTPPSSTPGTPTTPESPPSGGSPTPTTPTPGAGSTSPPPPPK 176
>VGLG_HHV2H (P13290) Glycoprotein G| Length = 699 Score = 29.3 bits (64), Expect = 3.0 Identities = 16/38 (42%), Positives = 17/38 (44%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAP 126 PPP PG TLPPG P P + R A AP Sbjct: 592 PPPA-----RPGPIRPTLPPGILGPLAPNTPRPPAQAP 624
>RUSC2_HUMAN (Q8N2Y8) RUN and SH3 domain-containing protein 2| Length = 1516 Score = 29.3 bits (64), Expect = 3.0 Identities = 13/36 (36%), Positives = 17/36 (47%) Frame = +1 Query: 16 PPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASA 123 PP G R T G A + PG P +P + +Q A Sbjct: 631 PPAGLRATGQGPLAQLMDPGPALPGSPANSHTQRDA 666
>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5| Length = 388 Score = 29.3 bits (64), Expect = 3.0 Identities = 17/41 (41%), Positives = 17/41 (41%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP R S G PP SR P P SG P PP Sbjct: 348 PPPPPPRYPSAGPGMYPPPPPSRPPA-PPSGHGMIPPPPPP 387
>SIX5_MOUSE (P70178) Homeobox protein SIX5 (DM locus-associated homeodomain| protein homolog) Length = 719 Score = 29.3 bits (64), Expect = 3.0 Identities = 15/43 (34%), Positives = 20/43 (46%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 GPPP +PG + P P +P+SG +PT PR Sbjct: 418 GPPPASTFPLTPGAVPAVAAP-QVVPLSPSSGYPTGLSPTSPR 459
>WASP_HUMAN (P42768) Wiskott-Aldrich syndrome protein (WASp)| Length = 501 Score = 29.3 bits (64), Expect = 3.0 Identities = 17/43 (39%), Positives = 18/43 (41%) Frame = +1 Query: 7 AGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 A PPP R PGR PP P +GRS P PP Sbjct: 349 APPPPTPRGPPPPGRGGPPPPP------PPATGRSGPLPPPPP 385 Score = 27.7 bits (60), Expect = 8.7 Identities = 21/60 (35%), Positives = 22/60 (36%), Gaps = 18/60 (30%) Frame = +1 Query: 10 GPPPCGRRRTSP------GRSASTLPPGSRA------------PCNPTSGRSQASAPTPP 135 GPPP GR P GRS PP A P P+SG A P PP Sbjct: 357 GPPPPGRGGPPPPPPPATGRSGPLPPPPPGAGGPPMPPPPPPPPPPPSSGNGPAPPPLPP 416
>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like| protein) Length = 349 Score = 28.9 bits (63), Expect = 3.9 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%) Frame = +1 Query: 16 PPCGRR--RTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 PP G ++S S +T PPGS AP + + S P PP+ Sbjct: 180 PPGGAHSPKSSSAVSPATSPPGSMAPKSGSPVSPTTSPPAPPK 222
>BAT3_RAT (Q6MG49) Large proline-rich protein BAT3 (HLA-B-associated| transcript 3) Length = 1096 Score = 28.9 bits (63), Expect = 3.9 Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%) Frame = +1 Query: 1 SAAGPPPC-GRRRTSPGR-SASTLPPGSRAPCNPTSGRSQASAPTPP 135 + A PPP G SPG AS+LPP S + T G + P PP Sbjct: 385 NGARPPPAPGAEAASPGSGQASSLPPSSATVDSSTEG-APPPGPAPP 430
>VGLD_BHV1P (P24906) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.9 bits (63), Expect = 3.9 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -2 Query: 182 ARDEEGR------GCEGEAGHLGGVGALACDLPDV--GLQGARDPGGSVDAERP 45 AR++EG G EG G G G P+ G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESQTPEANGGAEGEPKPGPSPDADRP 336
>RSMB_RAT (P17136) Small nuclear ribonucleoprotein-associated protein B| (snRNP-B) (Sm protein B) (Sm-B) (SmB) (SM11) (Fragment) Length = 214 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG PPG R P P G Sbjct: 159 PPPMGRGAPPPGMMGP--PPGMRPPMGPPMG 187
>RSMB_MOUSE (P27048) Small nuclear ribonucleoprotein-associated protein B| (snRNP-B) (Sm protein B) (Sm-B) (SmB) Length = 231 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG PPG R P P G Sbjct: 176 PPPMGRGAPPPGMMGP--PPGMRPPMGPPMG 204
>IF4G1_HUMAN (Q04637) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) (p220) Length = 1600 Score = 28.9 bits (63), Expect = 3.9 Identities = 17/46 (36%), Positives = 21/46 (45%), Gaps = 1/46 (2%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSASTLPPGSRAP-CNPTSGRSQASAPTPPR 138 + GPPP SPG PPG AP T +Q + P+ PR Sbjct: 7 STGPPPA----PSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPR 48
>RSMB_HUMAN (P14678) Small nuclear ribonucleoprotein-associated proteins B and| B' (snRNP-B) (Sm protein B/B') (Sm-B/Sm-B') (SmB/SmB') Length = 240 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG PPG R P P G Sbjct: 176 PPPMGRGAPPPGMMGP--PPGMRPPMGPPMG 204
>RSMB_ERIEU (Q9TU67) Small nuclear ribonucleoprotein-associated protein B'| (snRNP-B') (Sm protein B') (Sm-B') (SmB') (snRPB') Length = 240 Score = 28.9 bits (63), Expect = 3.9 Identities = 14/31 (45%), Positives = 14/31 (45%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSG 105 PPP GR PG PPG R P P G Sbjct: 176 PPPMGRGAPPPGMMGP--PPGMRPPMGPPMG 204
>PRB2_HUMAN (P02812) Basic salivary proline-rich protein 2 (Salivary| proline-rich protein) (Con1 glycoprotein) [Contains: Basic peptide P-F] (Fragment) Length = 382 Score = 28.9 bits (63), Expect = 3.9 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G ++ RS P G P G +Q P PP Sbjct: 189 GPPPQGDNKSQSARSPPGKPQGP-----PPQGGNQPQGPPPP 225 Score = 28.5 bits (62), Expect = 5.1 Identities = 15/42 (35%), Positives = 18/42 (42%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP G ++ RS P G P G +Q P PP Sbjct: 127 GPPPQGDNKSRSSRSPPGKPQGP-----PPQGGNQPQGPPPP 163
>GRIN1_HUMAN (Q7Z2K8) G protein-regulated inducer of neurite outgrowth 1 (GRIN1)| Length = 1008 Score = 28.9 bits (63), Expect = 3.9 Identities = 17/34 (50%), Positives = 19/34 (55%), Gaps = 1/34 (2%) Frame = +1 Query: 40 SPGRSASTLPPGSRAPCNPTSGRS-QASAPTPPR 138 SP A+ PPG R N T S +ASAP PPR Sbjct: 776 SPCPEAAAPPPGPRTRDNFTKAPSWEASAPPPPR 809
>SFPQ_HUMAN (P23246) Splicing factor, proline- and glutamine-rich| (Polypyrimidine tract-binding protein-associated splicing factor) (PTB-associated splicing factor) (PSF) (DNA-binding p52/p100 complex, 100 kDa subunit) (100-kDa DNA-pairing protein) (hPOMp Length = 707 Score = 28.9 bits (63), Expect = 3.9 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = +1 Query: 1 SAAGPPPCGRRRT-SPGRSASTLPPGSRAPCNPTSG----RSQASAPTPP 135 ++ PP G T +P + ++ PPG+ P P+SG QA P PP Sbjct: 138 TSGAPPGSGPGPTPTPPPAVTSAPPGAPPPTPPSSGVPTTPPQAGGPPPP 187
>SLAP_BACCI (P35824) S-layer-related protein precursor| Length = 1616 Score = 28.9 bits (63), Expect = 3.9 Identities = 18/47 (38%), Positives = 20/47 (42%), Gaps = 8/47 (17%) Frame = +1 Query: 25 GRRRTSPGRSASTLPPGSRAPCNPTSGR--------SQASAPTPPRW 141 GR T+P R + T PP A C P S R S A P RW Sbjct: 1392 GRPLTAPRRWSWTRPPECSASCPPASNRPGARRRPLSATEAGGPTRW 1438
>WASL_BOVIN (Q95107) Neural Wiskott-Aldrich syndrome protein (N-WASP)| Length = 505 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/45 (37%), Positives = 20/45 (44%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S+ PPP R R +P S P + AP P R AP PP Sbjct: 296 SSGPPPPPARGRGAPPPPPSRAP--TAAPPPPPPSRPGVGAPPPP 338
>EXON_HHV2 (P06489) Alkaline exonuclease (EC 3.1.11.-)| Length = 620 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/39 (41%), Positives = 18/39 (46%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAP 126 GP P R TSPG PGS P +P G+ AP Sbjct: 38 GPRPAPPRPTSPG------APGSHWPQSPPRGQPDGGAP 70
>RLUB_XANAC (Q8PK58) Ribosomal large subunit pseudouridine synthase B (EC| 5.4.99.-) (rRNA-uridine isomerase B) (rRNA pseudouridylate synthase B) Length = 550 Score = 28.5 bits (62), Expect = 5.1 Identities = 23/59 (38%), Positives = 25/59 (42%), Gaps = 7/59 (11%) Frame = -2 Query: 167 GRGCEGEAGHLGGVGALACDLPDVGLQG-ARDPGGSVDAER------PGDVRRRPHGGG 12 GR G G G G + + G G AR PGG A R PG RRP GGG Sbjct: 488 GRPSGGRPGPGGNRGPASANRGPGGPGGGARGPGGPGGAPRGPGGRPPGGGNRRPPGGG 546
>VGLD_BHV1S (Q08100) Glycoprotein D precursor (Glycoprotein IV)| Length = 417 Score = 28.5 bits (62), Expect = 5.1 Identities = 19/54 (35%), Positives = 25/54 (46%), Gaps = 8/54 (14%) Frame = -2 Query: 182 ARDEEGRGCEGEAGHLG--------GVGALACDLPDVGLQGARDPGGSVDAERP 45 AR++EG +G AG G G G + G +G PG S DA+RP Sbjct: 283 AREDEGETEDGAAGREGNGGPPGPEGDGESPTPEANGGAEGEPKPGPSPDADRP 336
>TCGAP_HUMAN (O14559) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1287 Score = 28.5 bits (62), Expect = 5.1 Identities = 15/45 (33%), Positives = 19/45 (42%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S++ PP R R+ PG LP RAP P + PP Sbjct: 1185 SSSSPPAHPRSRSDPGPPVPRLPQKQRAPWGPRTPHRVPGPWGPP 1229
>BEH4_ARATH (Q9ZV88) BES1/BZR1 homolog protein 4| Length = 325 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/42 (38%), Positives = 22/42 (52%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAP 126 S+ P PC SPG S++ + P S + N TSG Q+ P Sbjct: 94 SSYQPSPCASYNPSPG-SSNFMSPASSSFANLTSGDGQSLIP 134
>PEXLP_TOBAC (Q03211) Pistil-specific extensin-like protein precursor (PELP)| Length = 426 Score = 28.5 bits (62), Expect = 5.1 Identities = 15/44 (34%), Positives = 20/44 (45%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 A PPP +P S +T PP + P P + +S P PP Sbjct: 194 AKQPPPPPPPVKAPSPSPATQPPTKQPPPPPRAKKSPLLPPPPP 237
>IF4G1_MOUSE (Q6NZJ6) Eukaryotic translation initiation factor 4 gamma 1| (eIF-4-gamma 1) (eIF-4G1) (eIF-4G 1) Length = 1600 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 1/44 (2%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAP-CNPTSGRSQASAPTPPR 138 GPPP SPG PPG AP T +Q + P+ PR Sbjct: 9 GPPPA----RSPGLPQPAFPPGQTAPVVFSTPQATQMNTPSQPR 48
>CTAG2_HUMAN (O75638) Cancer/testis antigen 2 (L antigen family member 1)| (LAGE-1 protein) (ESO-2 protein) Length = 210 Score = 28.5 bits (62), Expect = 5.1 Identities = 24/70 (34%), Positives = 27/70 (38%), Gaps = 14/70 (20%) Frame = -2 Query: 170 EGRGCEGEAGHLGGVGALACDLPD-----------VGLQGARDP--GGSVDAERP-GDVR 33 EGRG G G G G +PD G G R P G+ A P G Sbjct: 4 EGRGTGGSTGDADGPGGPG--IPDGPGGNAGGPGEAGATGGRGPRGAGAARASGPRGGAP 61 Query: 32 RRPHGGGPAA 3 R PHGG +A Sbjct: 62 RGPHGGAASA 71
>WASIP_MOUSE (Q8K1I7) Wiskott-Aldrich syndrome protein-interacting protein| (WASP-interacting protein) Length = 493 Score = 28.5 bits (62), Expect = 5.1 Identities = 18/45 (40%), Positives = 19/45 (42%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S+A P P SPGRS PP S P P S P PP Sbjct: 333 SSAPPLP------SPGRSGPLPPPPSERPPPPVRDPPGRSGPLPP 371
>LRFN4_HUMAN (Q6PJG9) Leucine-rich repeat and fibronectin type-III| domain-containing protein 4 precursor Length = 635 Score = 28.5 bits (62), Expect = 5.1 Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%) Frame = -2 Query: 191 RTCARDEEGRGCEGEAGHLGGVGALACDLPDVGLQGA--RDPGGSVD 57 R+C+ D GC G A LGG A GL GA R GGS + Sbjct: 582 RSCSLDLGDAGCYGYARRLGGAWARRSHSVHGGLLGAGCRGVGGSAE 628
>SREC2_MOUSE (P59222) Scavenger receptor class F member 2 precursor (Scavenger| receptor expressed by endothelial cells 2 protein) (SREC-II) Length = 833 Score = 28.5 bits (62), Expect = 5.1 Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 1/47 (2%) Frame = +1 Query: 1 SAAGPPPCGRRRT-SPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 +A PPP GR+ SP T S P T ++PTPPR Sbjct: 669 AAPSPPPAGRKAAPSPSGRKRTPSNSSVQPPGLTEEAPGPASPTPPR 715
>WASP_MOUSE (P70315) Wiskott-Aldrich syndrome protein homolog (WASp)| Length = 520 Score = 28.5 bits (62), Expect = 5.1 Identities = 16/42 (38%), Positives = 18/42 (42%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 GPPP GR P +T G P P +G A P PP Sbjct: 375 GPPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPPPP 416 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 5/48 (10%) Frame = +1 Query: 7 AGPPPCGRRRTSPGRSASTLPP-----GSRAPCNPTSGRSQASAPTPP 135 A PPP R PGR PP S P P G AP PP Sbjct: 367 APPPPTPRGPPPPGRGGPPPPPPPATGRSGPPPPPLPGAGGPPAPPPP 414
>CLIC6_RABIT (Q9N2G5) Chloride intracellular channel 6 (Parchorin)| Length = 637 Score = 28.5 bits (62), Expect = 5.1 Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%) Frame = -2 Query: 179 RDEEGRGCEGEAGHLGGVGALACDLP--DVGLQGARDPGGSVDAERPGDVRRRPHGGG 12 R E R EG+A GA +P V +G+ D GGSVDA D GG Sbjct: 129 RGEAAREAEGQAAAPAAPGAQEEAVPGDSVDAEGSIDAGGSVDAAGSVDAGGSIDAGG 186
>SF04_HUMAN (Q8IWZ8) Splicing factor 4 (RNA-binding protein RBP)| Length = 645 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/45 (28%), Positives = 21/45 (46%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 S P P +R++ P + +LPP + P + T + AP P Sbjct: 326 SFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAP 370
>PRR3_PANTR (Q7YR36) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 188 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTL---PPGSRAPCNPTSGRSQASAPTPP 135 S GPPP + PG S L PPGSR P P S P PP Sbjct: 39 SLLGPPPMANGK--PGDPKSALHRGPPGSRGPLIP----PLLSLPPPP 80
>PRR3_HUMAN (P79522) Proline-rich protein 3 (MHC class I region proline-rich| protein CAT56) Length = 188 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/48 (41%), Positives = 21/48 (43%), Gaps = 3/48 (6%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTL---PPGSRAPCNPTSGRSQASAPTPP 135 S GPPP + PG S L PPGSR P P S P PP Sbjct: 39 SLLGPPPMANGK--PGDPKSALHRGPPGSRGPLIP----PLLSLPPPP 80
>SEPA_EMENI (P78621) Cytokinesis protein sepA (FH1/2 protein) (Forced expression| inhibition of growth A) Length = 1790 Score = 28.1 bits (61), Expect = 6.6 Identities = 17/45 (37%), Positives = 19/45 (42%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 +AA PPP PG S + PP P P G A P PP Sbjct: 1013 TAAPPPPPPPPPAHPGLSGAA-PPPPPPPPPPPPGAGAAPPPPPP 1056
>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)| Length = 685 Score = 28.1 bits (61), Expect = 6.6 Identities = 15/41 (36%), Positives = 18/41 (43%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP G + P S + PPG+R P S R A P Sbjct: 170 PPPPGEQ--PPSGSGHSRPPGARPPHRGGSSRGSGDAAAAP 208
>SYN1_CANFA (O62732) Synapsin-1 (Synapsin I) (Fragment)| Length = 415 Score = 28.1 bits (61), Expect = 6.6 Identities = 18/43 (41%), Positives = 22/43 (51%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTP 132 A+G PP G++R P + PPG P PT SQA P P Sbjct: 305 ASGAPPSGQQRQGPPQK----PPG---PAGPTRQASQA-GPMP 339
>NIR_BETVE (P38500) Ferredoxin--nitrite reductase, chloroplast precursor (EC| 1.7.7.1) Length = 583 Score = 28.1 bits (61), Expect = 6.6 Identities = 12/18 (66%), Positives = 13/18 (72%) Frame = -2 Query: 182 ARDEEGRGCEGEAGHLGG 129 ARDE G+ CEG A LGG Sbjct: 521 ARDENGKPCEGAAVFLGG 538
>CO6A2_CHICK (P15988) Collagen alpha-2(VI) chain precursor| Length = 1022 Score = 28.1 bits (61), Expect = 6.6 Identities = 20/53 (37%), Positives = 24/53 (45%) Frame = -2 Query: 173 EEGRGCEGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGG 15 E RG GE G+ G G D GL G R P G+V PG++ R G Sbjct: 450 EGPRGLPGEVGNKGARG-------DQGLPGPRGPTGAVG--EPGNIGSRGDPG 493
>DRD4_RAT (P30729) D(4) dopamine receptor (Dopamine D4 receptor) (D(2C)| dopamine receptor) Length = 387 Score = 28.1 bits (61), Expect = 6.6 Identities = 15/41 (36%), Positives = 20/41 (48%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PPP RTSP S+ S++PC+P A+ PP Sbjct: 253 PPPSPSLRTSPTVSSRPESDLSQSPCSPGCLLPDAALAQPP 293
>TCGAP_MOUSE (Q80YF9) TC10/CDC42 GTPase-activating protein (Sorting nexin 26)| Length = 1305 Score = 28.1 bits (61), Expect = 6.6 Identities = 13/32 (40%), Positives = 16/32 (50%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNP 96 S++ PP R R+ PG LP RAP P Sbjct: 1204 SSSSPPAHPRSRSDPGPPVPRLPQKQRAPWGP 1235
>PTPA1_ASPOR (Q2UN27) Serine/threonine-protein phosphatase 2A activator 1 (EC| 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase PTPA-1) (PPIase PTPA-1) (Rotamase PTPA-1) (Phosphotyrosyl phosphatase activator 1) Length = 478 Score = 28.1 bits (61), Expect = 6.6 Identities = 16/43 (37%), Positives = 17/43 (39%) Frame = +1 Query: 4 AAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTP 132 A PP R S S LPPG AP SQ + P P Sbjct: 421 AGREPPTTSRIPSALPDTSRLPPGPMAPTRAPWASSQPAGPAP 463
>OPN4_HUMAN (Q9UHM6) Melanopsin (Opsin-4)| Length = 478 Score = 28.1 bits (61), Expect = 6.6 Identities = 11/25 (44%), Positives = 13/25 (52%) Frame = +1 Query: 67 PPGSRAPCNPTSGRSQASAPTPPRW 141 P G R P +PT S + P PP W Sbjct: 4 PSGPRVPPSPTQEPSCMATPAPPSW 28
>IP3KC_HUMAN (Q96DU7) Inositol-trisphosphate 3-kinase C (EC 2.7.1.127) (Inositol| 1,4,5-trisphosphate 3-kinase C) (InsP 3-kinase C) (IP3K-C) Length = 683 Score = 27.7 bits (60), Expect = 8.7 Identities = 18/51 (35%), Positives = 21/51 (41%) Frame = -2 Query: 155 EGEAGHLGGVGALACDLPDVGLQGARDPGGSVDAERPGDVRRRPHGGGPAA 3 E EAG L + + P G + R PG G RP GGGP A Sbjct: 12 EAEAGALPAAARMGLEAPRGGRR--RQPGQQRPGPGAGAPAGRPEGGGPWA 60
>IF2_THEFY (Q47RV1) Translation initiation factor IF-2| Length = 955 Score = 27.7 bits (60), Expect = 8.7 Identities = 14/41 (34%), Positives = 19/41 (46%) Frame = +1 Query: 10 GPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTP 132 GP P R G+ A P G++ P P SG++ P P Sbjct: 115 GPRPGPRPEGGAGK-AGQQPSGAQGPARPESGKTPRPVPKP 154
>CO9A3_HUMAN (Q14050) Collagen alpha-3(IX) chain precursor| Length = 684 Score = 27.7 bits (60), Expect = 8.7 Identities = 23/58 (39%), Positives = 24/58 (41%), Gaps = 9/58 (15%) Frame = -2 Query: 161 GCEGEAGHLGGVGALACDLPD-----VGLQGAR----DPGGSVDAERPGDVRRRPHGG 15 G GEAGH G GAL P G QG + DPG GDV R GG Sbjct: 376 GERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQGLRGDVGDRGPGG 433
>HRX_HUMAN (Q03164) Zinc finger protein HRX (ALL-1) (Trithorax-like protein)| Length = 3969 Score = 27.7 bits (60), Expect = 8.7 Identities = 16/44 (36%), Positives = 20/44 (45%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTP 132 S+ P P R +P +S+S PP R P S SAP P Sbjct: 1240 SSQKPTPSAREDPAPKKSSSEPPP--RKPVEEKSEEGNVSAPGP 1281
>RFNG_CHICK (O12972) Beta-1,3-N-acetylglucosaminyltransferase radical fringe| (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase) Length = 372 Score = 27.7 bits (60), Expect = 8.7 Identities = 19/49 (38%), Positives = 21/49 (42%), Gaps = 7/49 (14%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCN-------PTSGRSQASAPTPPR 138 PPP G R SP R A P GS P + GR A +P P R Sbjct: 40 PPPAGPSRPSPKREAR--PAGSDVPGDRGGGSGAAGGGRGVAGSPWPSR 86
>KS6A4_HUMAN (O75676) Ribosomal protein S6 kinase alpha-4 (EC 2.7.11.1) (Nuclear| mitogen-and stress-activated protein kinase 2) (90 kDa ribosomal protein S6 kinase 4) (Ribosomal protein kinase B) (RSKB) Length = 772 Score = 27.7 bits (60), Expect = 8.7 Identities = 16/40 (40%), Positives = 21/40 (52%) Frame = +1 Query: 19 PCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPPR 138 P +RR RSA+ GS AP NP GR+ ++ PR Sbjct: 726 PLAKRRKQKLRSATASRRGSPAPANP--GRAPVASKGAPR 763
>COL1_CAEEL (P08124) Cuticle collagen 1 precursor (Protein squat-3) (Protein| dumpy-15) Length = 296 Score = 27.7 bits (60), Expect = 8.7 Identities = 12/31 (38%), Positives = 15/31 (48%) Frame = +1 Query: 40 SPGRSASTLPPGSRAPCNPTSGRSQASAPTP 132 +PGR + PGS P P +A AP P Sbjct: 167 TPGRPGTDAAPGSPGPRGPPGPAGEAGAPGP 197
>CS007_HUMAN (Q9UPT8) Zinc finger CCCH-type domain-containing protein C19orf7| Length = 1303 Score = 27.7 bits (60), Expect = 8.7 Identities = 15/41 (36%), Positives = 17/41 (41%) Frame = +1 Query: 13 PPPCGRRRTSPGRSASTLPPGSRAPCNPTSGRSQASAPTPP 135 PP G T P PPG +AP +P Q P PP Sbjct: 511 PPGVGLLPTPPR------PPGPQAPTSPNGRPMQGGPPPPP 545
>YLPM1_MOUSE (Q9R0I7) YLP motif-containing protein 1 (Nuclear protein ZAP3)| Length = 1386 Score = 27.7 bits (60), Expect = 8.7 Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 9/54 (16%) Frame = +1 Query: 1 SAAGPPPCGRRRTSPGR---------SASTLPPGSRAPCNPTSGRSQASAPTPP 135 S+AG PP PG S++T PPG P P Q +AP PP Sbjct: 560 SSAGSPPVLPPPALPGGPPILPLPPLSSATPPPGIPPPGAPQGMPPQLTAPLPP 613 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.312 0.129 0.428 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 23,475,945 Number of Sequences: 219361 Number of extensions: 462416 Number of successful extensions: 2951 Number of sequences better than 10.0: 97 Number of HSP's better than 10.0 without gapping: 2278 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2887 length of database: 80,573,946 effective HSP length: 40 effective length of database: 71,799,506 effective search space used: 1723188144 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)
