>gb|AC141898.3| Mus musculus BAC clone RP23-155I18 from chromosome 5, complete sequence
          Length = 232201

 Score = 46.1 bits (23), Expect = 0.037
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 101   accccagcctatcgccccgcctc 123
             |||||||||||||||||||||||
Sbjct: 75989 accccagcctatcgccccgcctc 76011

>gb|AC129919.9| Homo sapiens chromosome 17, clone RP13-1277B16, complete sequence
          Length = 182735

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    ccccgccccgcagcgccaggcc 37
             ||||||||||||||||||||||
Sbjct: 33067 ccccgccccgcagcgccaggcc 33088

>gb|AC115099.6| Homo sapiens chromosome 17, clone RP11-149I9, complete sequence
          Length = 161156

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 16    ccccgccccgcagcgccaggcc 37
             ||||||||||||||||||||||
Sbjct: 22019 ccccgccccgcagcgccaggcc 22040

>dbj|AK056555.1| Homo sapiens cDNA FLJ31993 fis, clone NT2RP7009168
          Length = 3834

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                
Query: 16 ccccgccccgcagcgccaggcc 37
          ||||||||||||||||||||||
Sbjct: 66 ccccgccccgcagcgccaggcc 45

>gb|AC127496.5| Homo sapiens chromosome 17, clone CTD-2561B21, complete sequence
          Length = 166274

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 16    ccccgccccgcagcgccaggcc 37
             ||||||||||||||||||||||
Sbjct: 13751 ccccgccccgcagcgccaggcc 13730

>gb|AC009634.9| Homo sapiens chromosome 8, clone RP11-413C18, complete sequence
          Length = 205638

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 93    gagccaccaccccagcctat 112
             ||||||||||||||||||||
Sbjct: 70351 gagccaccaccccagcctat 70332

>gb|AC110275.13| Homo sapiens chromosome 8, clone RP11-122A17, complete sequence
          Length = 169699

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 93    gagccaccaccccagcctat 112
             ||||||||||||||||||||
Sbjct: 47794 gagccaccaccccagcctat 47813

>gb|AC183762.2| Pan troglodytes BAC clone CH251-684C16 from chromosome 2, complete
             sequence
          Length = 139973

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    tcccccgccccgcagcgcc 32
             |||||||||||||||||||
Sbjct: 46738 tcccccgccccgcagcgcc 46756

>gb|AC183595.3| Pan troglodytes BAC clone CH251-641G8 from chromosome 2, complete
             sequence
          Length = 211457

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 14    tcccccgccccgcagcgcc 32
             |||||||||||||||||||
Sbjct: 79666 tcccccgccccgcagcgcc 79648

>ref|XM_602219.2| PREDICTED: Bos taurus similar to collagen, type XXVII, alpha 1
           (LOC523908), mRNA
          Length = 3931

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 15  cccccgccccgcagcgccaggcc 37
           |||||||||||| ||||||||||
Sbjct: 305 cccccgccccgccgcgccaggcc 283

>gb|AC183765.3| Pan troglodytes BAC clone CH251-521I2 from chromosome 2, complete
              sequence
          Length = 179528

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 14     tcccccgccccgcagcgcc 32
              |||||||||||||||||||
Sbjct: 124305 tcccccgccccgcagcgcc 124323

>gb|AC183532.3| Pan troglodytes BAC clone CH251-569N9 from chromosome 2, complete
              sequence
          Length = 192494

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 14     tcccccgccccgcagcgcc 32
              |||||||||||||||||||
Sbjct: 177232 tcccccgccccgcagcgcc 177214

>gb|BC035728.1| Homo sapiens collagen, type XXVII, alpha 1, mRNA (cDNA clone
           IMAGE:5723750), partial cds
          Length = 1441

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                  
Query: 15  cccccgccccgcagcgccaggcc 37
           |||||||||||| ||||||||||
Sbjct: 323 cccccgccccgccgcgccaggcc 301

>emb|AL606469.8| Human DNA sequence from clone RP11-371A19 on chromosome 10 Contains the
             5' end of a novel gene (MGC46732) and a novel gene,
             complete sequence
          Length = 103069

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    gagccaccaccccagccta 111
             |||||||||||||||||||
Sbjct: 75552 gagccaccaccccagccta 75534

>emb|AL445543.20| Human DNA sequence from clone RP11-4H20 on chromosome 9 Contains the 5'
             end of the gene for a novel protein (FLJ11985, MGC11337)
             (KIAA0870) and a CpG island, complete sequence
          Length = 140327

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                    
Query: 15    cccccgccccgcagcgccaggcc 37
             |||||||||||| ||||||||||
Sbjct: 26290 cccccgccccgccgcgccaggcc 26268

>emb|AL354989.13| Human DNA sequence from clone RP11-537H15 on chromosome 9 Contains the
             5' end of a novel gene (KIAA1491, FLJ22435 FLJ21704,
             FLJ22148), two novel genes (including DKFZP434O125
             (KIAA1892, FLJ20347)), a tubulin beta pseudogene, an IMP
             (inosine monophosphate) dehydrogenase 1 (IMPDH1)
             pseudogene and four CpG islands, complete sequence
          Length = 151990

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 93    gagccaccaccccagccta 111
             |||||||||||||||||||
Sbjct: 54238 gagccaccaccccagccta 54220

>gb|AC024599.9| Homo sapiens chromosome 10 clone RP11-159H3, complete sequence
          Length = 173391

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 83     agcctgggaagagccacca 101
              |||||||||||||||||||
Sbjct: 140740 agcctgggaagagccacca 140722

>gb|AC092544.4| Homo sapiens BAC clone RP11-317F4 from 4, complete sequence
          Length = 159263

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 93     gagccaccaccccagccta 111
              |||||||||||||||||||
Sbjct: 156978 gagccaccaccccagccta 156996

>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                       
Query: 115      ccccgcctccgcttccgaagggt 137
                |||||||||||| ||||||||||
Sbjct: 29840552 ccccgcctccgcctccgaagggt 29840574

>gb|AC097374.3| Homo sapiens BAC clone RP11-71B7 from 2, complete sequence
          Length = 127075

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 14    tcccccgccccgcagcgcc 32
             |||||||||||||||||||
Sbjct: 47473 tcccccgccccgcagcgcc 47491

>dbj|AP004098.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ2056_H01
          Length = 123428

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 115   ccccgcctccgcttccgaagggt 137
             |||||||||||| ||||||||||
Sbjct: 96897 ccccgcctccgcctccgaagggt 96919

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 128    tccgaagggtcagtgatgg 146
              |||||||||||||||||||
Sbjct: 937574 tccgaagggtcagtgatgg 937556



 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 128    tccgaagggtcagtgatgg 146
              |||||||||||||||||||
Sbjct: 427133 tccgaagggtcagtgatgg 427115

>dbj|AP003017.1| Mesorhizobium loti MAFF303099 plasmid pMLb DNA, complete genome
          Length = 208315

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 128   tccgaagggtcagtgatgg 146
             |||||||||||||||||||
Sbjct: 71860 tccgaagggtcagtgatgg 71842

>gb|AY127730.1| Odontotermes sp. DKA-2002-1 isolate dka114 cytocrome oxidase
           subunit I (COI) gene, partial cds; mitochondrial gene
           for mitochondrial product
          Length = 937

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 131 gaagggtcagtgatggcgg 149
           |||||||||||||||||||
Sbjct: 232 gaagggtcagtgatggcgg 214

>emb|AL663027.9| Mouse DNA sequence from clone RP23-16P3 on chromosome 2, complete
              sequence
          Length = 219778

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 82     gagcctgggaagagccacc 100
              |||||||||||||||||||
Sbjct: 156734 gagcctgggaagagccacc 156716

>dbj|D78380.1|SMASSPH Serratia marcescens DNA for SSP-h1 and SSP-h2, complete cds
          Length = 7030

 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   ccccgccccgcagcgccag 34
            |||||||||||||||||||
Sbjct: 6342 ccccgccccgcagcgccag 6324



 Score = 38.2 bits (19), Expect = 9.0
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 16   ccccgccccgcagcgccag 34
            |||||||||||||||||||
Sbjct: 3119 ccccgccccgcagcgccag 3101


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,002,823
Number of Sequences: 3902068
Number of extensions: 1002823
Number of successful extensions: 69374
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 69244
Number of HSP's gapped (non-prelim): 130
length of query: 183
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 161
effective length of database: 17,147,199,772
effective search space: 2760699163292
effective search space used: 2760699163292
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)