ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
menu 
| Clone Name | baet79b08 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ234427.1|HVU234427 Hordeum vulgare partial mRNA; clone cMWG0701.uni Length = 312 Score = 424 bits (214), Expect = e-116 Identities = 214/214 (100%) Strand = Plus / Plus Query: 14 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 73 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 2 tcagtcgcagcagcagccgcacatcagcagcttgctctgttccatccggcagcaagcaat 61 Query: 74 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 133 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 62 ggcggccacgaccatggcgctctcctcccccgcgatgaagctcgccggagcctcgtacgt 121 Query: 134 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 193 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122 cctcggcggcggccgcatcaccatgcgcaagaccgcggccaaggctgccacctccagcag 181 Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||||||||||||||||| Sbjct: 182 cccgtggtacggccccgaccgcgtgctctacctc 215
>gb|BC029947.1| Homo sapiens, clone IMAGE:5196281, mRNA Length = 114 Score = 129 bits (65), Expect = 4e-27 Identities = 101/112 (90%), Gaps = 7/112 (6%) Strand = Plus / Plus Query: 38 cagcagcttgctctgttccatccggcagcaagcaatggcggccacgacca---tggcgct 94 ||||||||||||||||||||||||||||||| |||||||||| |||| ||||||| Sbjct: 1 cagcagcttgctctgttccatccggcagcaa----tggcggccaccaccaccatggcgct 56 Query: 95 ctcctcccccgcgatgaagctcgccggagcctcgtacgtcctcggcggcggc 146 ||||||||||||||| ||||||||||||||||| |||| ||||||||||||| Sbjct: 57 ctcctcccccgcgatcaagctcgccggagcctcctacgccctcggcggcggc 108
>emb|X55892.1|ZMLHCABB Zea mays L. mRNA for light-harvesting chlorophyll a/b binding protein Length = 869 Score = 75.8 bits (38), Expect = 5e-11 Identities = 41/42 (97%) Strand = Plus / Plus Query: 185 ctccagcagcccgtggtacggccccgaccgcgtgctctacct 226 |||| ||||||||||||||||||||||||||||||||||||| Sbjct: 144 ctccggcagcccgtggtacggccccgaccgcgtgctctacct 185
>ref|NM_191799.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 798 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 139 agcccgtggtacggcgccgaccgcgtgctctacctc 174
>ref|NM_192636.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 789 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 127 agcccgtggtacggcgccgaccgcgtgctctacctc 162
>gb|AY100470.1| Oryza sativa (indica cultivar-group) putative soluble starch synthase IV-1 gene, complete cds Length = 15000 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Minus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 14535 agcccgtggtacggcgccgaccgcgtgctctacctc 14500
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 30024476 agcccgtggtacggcgccgaccgcgtgctctacctc 30024511 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 23603670 agcccgtggtacggcgccgaccgcgtgctctacctc 23603705 Score = 52.0 bits (26), Expect = 8e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||||||| |||||||| Sbjct: 37443416 cccgtggtacggccccgaccgcgtcatctacctc 37443383
>dbj|AP003292.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0690B02 Length = 153116 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 20466 agcccgtggtacggcgccgaccgcgtgctctacctc 20501
>dbj|AP003278.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0518F01 Length = 154541 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 66369 agcccgtggtacggcgccgaccgcgtgctctacctc 66404
>dbj|AK121563.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033034J10, full insert sequence Length = 1180 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtgctctacctc 233
>dbj|AK119173.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-037-B06, full insert sequence Length = 1126 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 197 agcccgtggtacggcgccgaccgcgtgctctacctc 232
>emb|X13909.1|OSCABR2 Rice cab2R gene for light harvesting chlorophyll a/b-binding protein Length = 1442 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 624 agcccgtggtacggcgccgaccgcgtgctctacctc 659
>dbj|AK104176.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-C12, full insert sequence Length = 1055 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctc 255
>dbj|AK103946.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-014-B02, full insert sequence Length = 1055 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 220 agcccgtggtacggcgccgaccgcgtgctctacctc 255
>dbj|AK062725.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-106-D08, full insert sequence Length = 1057 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctc 257
>dbj|AK058289.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-E06, full insert sequence Length = 1057 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 222 agcccgtggtacggcgccgaccgcgtgctctacctc 257
>gb|U74295.1|OSU74295 Oryza sativa chlorophyll a/b binding protein (kcdl895) mRNA, complete cds Length = 1022 Score = 63.9 bits (32), Expect = 2e-07 Identities = 35/36 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||||||||||||| Sbjct: 181 agcccgtggtacggcgccgaccgcgtgctctacctc 216
>emb|X53398.1|ZMCABM7 Z.mays cab-m7 gene for light harvesting chlorophyll a/b binding protein Length = 2261 Score = 61.9 bits (31), Expect = 8e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacct 226 ||||||||||||||||||||||||||||| ||||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacct 1185
>emb|X63205.1|ZMCAB48 Zea mays cab48 gene for chlorophyll a/b binding protein precursor Length = 2780 Score = 61.9 bits (31), Expect = 8e-07 Identities = 43/47 (91%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgcatcaccatgcgcaagaccgcggccaag 176 ||||| |||||| |||||||||||||||||||||||||| |||||| Sbjct: 1994 acgtcttcggcgagggccgcatcaccatgcgcaagaccgccgccaag 2040
>emb|Y00379.1|ZMLHCP Maize mRNA for light-harvesting chlorophyll a/b binding protein LHCP Length = 967 Score = 61.9 bits (31), Expect = 8e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacct 226 ||||||||||||||||||||||||||||| ||||| Sbjct: 203 agcccgtggtacggccccgaccgcgtgctgtacct 237
>gb|AY109324.1| Zea mays CL187_1 mRNA sequence Length = 2262 Score = 61.9 bits (31), Expect = 8e-07 Identities = 34/35 (97%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacct 226 ||||||||||||||||||||||||||||| ||||| Sbjct: 1151 agcccgtggtacggccccgaccgcgtgctgtacct 1185
>gb|BC053854.1| Homo sapiens cDNA clone IMAGE:5194336, partial cds Length = 1044 Score = 60.0 bits (30), Expect = 3e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||| |||||||||||||||||||| Sbjct: 203 gcagcccgtggtacgggtccgaccgcgtgctctacctc 240 Score = 56.0 bits (28), Expect = 5e-05 Identities = 28/28 (100%) Strand = Plus / Plus Query: 151 tcaccatgcgcaagaccgcggccaaggc 178 |||||||||||||||||||||||||||| Sbjct: 158 tcaccatgcgcaagaccgcggccaaggc 185
>emb|X13908.1|OSCABR1 Rice cab1R gene for light harvesting chlorophyll a/b-binding protein Length = 1664 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 585 agcccgtggtacggcgccgaccgcgtcctctacctc 620 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 534 atcaccatgcgcaagaccgc 553 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 459 accatggcgctctcctcccc 478
>emb|AJ843976.1| Plantago major partial mRNA for light harvesting protein 1 (lhc1 gene) Length = 688 Score = 56.0 bits (28), Expect = 5e-05 Identities = 31/32 (96%) Strand = Plus / Plus Query: 186 tccagcagcccgtggtacggccccgaccgcgt 217 ||||||||||||||||||||||| |||||||| Sbjct: 25 tccagcagcccgtggtacggccctgaccgcgt 56
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 10793123 agcccgtggtacggcgccgaccgcgtcctctacctc 10793158 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 10793072 atcaccatgcgcaagaccgc 10793091 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 10792997 accatggcgctctcctcccc 10793016
>dbj|AP005313.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0512H04 Length = 151049 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 16846 agcccgtggtacggcgccgaccgcgtcctctacctc 16881 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 16795 atcaccatgcgcaagaccgc 16814 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 16720 accatggcgctctcctcccc 16739
>dbj|AP005700.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBb0085I16 Length = 141701 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 129741 agcccgtggtacggcgccgaccgcgtcctctacctc 129776 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 129690 atcaccatgcgcaagaccgc 129709 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 129615 accatggcgctctcctcccc 129634
>dbj|AK104350.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-G02, full insert sequence Length = 1013 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 191 agcccgtggtacggcgccgaccgcgtcctctacctc 226 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 140 atcaccatgcgcaagaccgc 159 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 65 accatggcgctctcctcccc 84
>dbj|AK104288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-E05, full insert sequence Length = 1021 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctc 231 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK104281.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-006-D01, full insert sequence Length = 1056 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 198 agcccgtggtacggcgccgaccgcgtcctctacctc 233 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 147 atcaccatgcgcaagaccgc 166 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 72 accatggcgctctcctcccc 91
>dbj|AK060851.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E08, full insert sequence Length = 1235 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctc 231 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|AK058305.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-013-H02, full insert sequence Length = 1045 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 196 agcccgtggtacggcgccgaccgcgtcctctacctc 231 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 145 atcaccatgcgcaagaccgc 164 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 70 accatggcgctctcctcccc 89
>dbj|D00641.1|RICLHCP1 Oryza sativa (japonica cultivar-group) mRNA for type I light-harvesting chlorophyll a/b binding protein of photosystem II (LHCPII), complete cds Length = 1022 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Plus Query: 192 agcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||||| |||||||||| ||||||||| Sbjct: 177 agcccgtggtacggcgccgaccgcgtcctctacctc 212 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 150 atcaccatgcgcaagaccgc 169 |||||||||||||||||||| Sbjct: 126 atcaccatgcgcaagaccgc 145 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 84 accatggcgctctcctcccc 103 |||||||||||||||||||| Sbjct: 51 accatggcgctctcctcccc 70
>emb|AJ635207.1| Triticum durum ssp. durum partial mRNA for putative chlorophyll a/b binding protein (cab gene) Length = 760 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||| | ||||| |||||||||||| Sbjct: 134 agcagcccgtggtacggctctgaccgtgtgctctacctc 172
>gb|M10144.1|WHTCAB Wheat major chlorophyll a/b-binding protein gene, complete cds Length = 1191 Score = 54.0 bits (27), Expect = 2e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 189 agcagcccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||| | ||||| |||||||||||| Sbjct: 339 agcagcccgtggtacggctctgaccgtgtgctctacctc 377
>ref|XM_483142.1| Oryza sativa (japonica cultivar-group), mRNA Length = 426 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||| |||||||||||||||||| |||||||| Sbjct: 350 gcagcccgtcgtacggccccgaccgcgtcatctacctc 387
>ref|NM_190738.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 52.0 bits (26), Expect = 8e-04 Identities = 32/34 (94%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||||||| |||||||| Sbjct: 483 cccgtggtacggccccgaccgcgtcatctacctc 516
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||| |||||||||||||||||| |||||||| Sbjct: 24462467 gcagcccgtcgtacggccccgaccgcgtcatctacctc 24462504
>dbj|AP003270.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0505D12 Length = 146951 Score = 52.0 bits (26), Expect = 8e-04 Identities = 32/34 (94%) Strand = Plus / Minus Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||||||| |||||||| Sbjct: 37953 cccgtggtacggccccgaccgcgtcatctacctc 37920
>dbj|AP005148.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:B1142B04 Length = 161964 Score = 52.0 bits (26), Expect = 8e-04 Identities = 35/38 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||| |||||||||||||||||| |||||||| Sbjct: 78183 gcagcccgtcgtacggccccgaccgcgtcatctacctc 78220
>gb|AC023240.9| Oryza sativa chromosome 10 BAC OSJNBa0051D19 genomic sequence, complete sequence Length = 131984 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 76481 ccacctctggcagcccgtggtacggacccgaccgcgt 76445
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18136647 ccacctctggcagcccgtggtacggacccgaccgcgt 18136683
>emb|X14794.1|ZMCAB1 Maize cab-1 gene for chlorophyll a/b-binding protein Length = 2100 Score = 50.1 bits (25), Expect = 0.003 Identities = 66/80 (82%), Gaps = 6/80 (7%) Strand = Plus / Plus Query: 144 ggccgcatcaccatgcgcaagaccgcgg------ccaaggctgccacctccagcagcccg 197 ||||||||||||||||||||||||| || |||||| || | ||| ||||||| Sbjct: 967 ggccgcatcaccatgcgcaagaccgtgggcaagcccaaggtggcggcgtccggcagcccc 1026 Query: 198 tggtacggccccgaccgcgt 217 |||||||||||||||||||| Sbjct: 1027 tggtacggccccgaccgcgt 1046
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 50.1 bits (25), Expect = 0.003 Identities = 34/37 (91%) Strand = Plus / Plus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||||||||||| Sbjct: 18145900 ccacctctggcagcccgtggtacggacccgaccgcgt 18145936
>gb|AC147802.2| Oryza sativa chromosome 3 BAC OSJNBb0013C14 genomic sequence, complete sequence Length = 132981 Score = 44.1 bits (22), Expect = 0.19 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||| |||||||| Sbjct: 94169 tggtacggccccgaccgcgtcatctacctc 94140
>gb|AY389553.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein (CAB) mRNA, partial cds Length = 720 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccga 211 |||||||||||||||||||||| Sbjct: 178 gcagcccgtggtacggccccga 199
>gb|AY389549.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 3C (LHCP) mRNA, partial cds Length = 661 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccga 211 |||||||||||||||||||||| Sbjct: 13 gcagcccgtggtacggccccga 34
>gb|AC119289.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0025P09, complete sequence Length = 167318 Score = 44.1 bits (22), Expect = 0.19 Identities = 31/34 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 ||||| |||||||||||||||||| |||||||| Sbjct: 62463 cccgtcgtacggccccgaccgcgtcatctacctc 62496
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 44.1 bits (22), Expect = 0.19 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||| |||||||| Sbjct: 18189184 tggtacggccccgaccgcgtcatctacctc 18189155 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503805 gcagcccgtggtacggacccaaccgcgt 3503832
>gb|BT023765.1| Drosophila melanogaster RE18252 full insert cDNA Length = 3550 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3741869 cgccggagccgcgtacgtcctcggcg 3741894
>ref|NM_165165.1| Drosophila melanogaster CG5953-RB, transcript variant B (CG5953), mRNA Length = 3796 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 707 cgcagcagcagccgcacatcag 728
>ref|NM_135952.1| Drosophila melanogaster CG5953-RA, transcript variant A (CG5953), mRNA Length = 3534 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 445 cgcagcagcagccgcacatcag 466
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 44.1 bits (22), Expect = 0.19 Identities = 31/34 (91%) Strand = Plus / Plus Query: 194 cccgtggtacggccccgaccgcgtgctctacctc 227 ||||| |||||||||||||||||| |||||||| Sbjct: 17802509 cccgtcgtacggccccgaccgcgtcatctacctc 17802542
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 44.1 bits (22), Expect = 0.19 Identities = 28/30 (93%) Strand = Plus / Minus Query: 198 tggtacggccccgaccgcgtgctctacctc 227 |||||||||||||||||||| |||||||| Sbjct: 18182725 tggtacggccccgaccgcgtcatctacctc 18182696 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 3503916 gcagcccgtggtacggacccaaccgcgt 3503943
>gb|AC007185.12|AC007185 Drosophila melanogaster, chromosome 2L, region 36A-, BAC clone BACR44N04, complete sequence Length = 190651 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 70485 cgcagcagcagccgcacatcag 70464
>emb|X68682.1|ZMLHCB Z.mays mRNA for type II light-harvesting chlorophyll a/b-binding protein Length = 1126 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 140 cggcggccgcatcaccatgcgc 161 |||||||||||||||||||||| Sbjct: 123 cggcggccgcatcaccatgcgc 144
>emb|X89023.1|HVLHCIITI H.vulgare mRNA for LHC II type I protein Length = 934 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Plus Query: 151 tcaccatgcgcaagaccgcggc 172 |||||||||||||||||||||| Sbjct: 113 tcaccatgcgcaagaccgcggc 134 Score = 40.1 bits (20), Expect = 2.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctc 227 ||||||||||||| |||||||| | || || |||||||||||| Sbjct: 152 cctccagcagcccatggtacggagctgatcgtgtgctctacctc 195
>gb|AE003651.2| Drosophila melanogaster chromosome 2L, section 60 of 83 of the complete sequence Length = 254646 Score = 44.1 bits (22), Expect = 0.19 Identities = 22/22 (100%) Strand = Plus / Minus Query: 19 cgcagcagcagccgcacatcag 40 |||||||||||||||||||||| Sbjct: 166862 cgcagcagcagccgcacatcag 166841
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 116 cgccggagcctcgtacgtcctcggcg 141 |||||||||| ||||||||||||||| Sbjct: 3726293 cgccggagccgcgtacgtcctcggcg 3726318
>gb|M29334.1|LGILHCPABP L.gibba light-harvesting chlorophyll a/b protein gene, complete cds Length = 1633 Score = 44.1 bits (22), Expect = 0.19 Identities = 31/34 (91%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgt 217 ||||| ||||||| |||||||| ||||||||||| Sbjct: 528 cctccggcagcccctggtacgggcccgaccgcgt 561
>gb|AY389606.1| Hyacinthus orientalis chloroplast chlorophyll A-B binding protein 40 mRNA, complete cds Length = 859 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccg 214 ||||||||||||||||||| ||||| Sbjct: 194 gcagcccgtggtacggcccggaccg 218 Score = 40.1 bits (20), Expect = 2.9 Identities = 35/40 (87%) Strand = Plus / Plus Query: 137 cggcggcggccgcatcaccatgcgcaagaccgcggccaag 176 ||||| ||| ||| |||| |||||||||||||| |||||| Sbjct: 135 cggcgacggacgcttcacgatgcgcaagaccgccgccaag 174
>gb|AE011818.1| Xanthomonas axonopodis pv. citri str. 306, section 196 of 469 of the complete genome Length = 11244 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Minus Query: 136 tcggcggcggccgcatcaccatgcgcaag 164 |||||||||||||||||||| ||||||| Sbjct: 3700 tcggcggcggccgcatcaccgcgcgcaag 3672
>gb|AC006435.7|AC006435 Homo sapiens chromosome 17, clone RP5-59D14, complete sequence Length = 139267 Score = 42.1 bits (21), Expect = 0.73 Identities = 24/25 (96%) Strand = Plus / Minus Query: 93 ctctcctcccccgcgatgaagctcg 117 ||||||||||||| ||||||||||| Sbjct: 38496 ctctcctcccccgggatgaagctcg 38472
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 16289621 ccacctctggcagcccgtggtacggacccaaccgcgt 16289585
>dbj|AB211497.1| Lemna paucicostata LpCAB1 mRNA for CAB homologue1, partial cds Length = 695 Score = 42.1 bits (21), Expect = 0.73 Identities = 27/29 (93%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgac 212 ||||| ||||||| ||||||||||||||| Sbjct: 42 cctccggcagcccctggtacggccccgac 70
>dbj|AP004742.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBb0026F02 Length = 132237 Score = 42.1 bits (21), Expect = 0.73 Identities = 33/37 (89%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtggtacggccccgaccgcgt 217 ||||||| |||||||||||||||| ||| ||||||| Sbjct: 114513 ccacctctggcagcccgtggtacggacccaaccgcgt 114477
>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome Length = 4969803 Score = 42.1 bits (21), Expect = 0.73 Identities = 21/21 (100%) Strand = Plus / Plus Query: 134 cctcggcggcggccgcatcac 154 ||||||||||||||||||||| Sbjct: 4204589 cctcggcggcggccgcatcac 4204609
>gb|U73218.1|TAU73218 Triticum aestivum chlorophyll a/b-binding protein WCAB precursor (Wcab) mRNA, complete cds Length = 918 Score = 42.1 bits (21), Expect = 0.73 Identities = 30/33 (90%) Strand = Plus / Plus Query: 146 ccgcatcaccatgcgcaagaccgcggccaaggc 178 |||| ||||||||||||||||||| || ||||| Sbjct: 99 ccgcgtcaccatgcgcaagaccgcagcaaaggc 131 Score = 40.1 bits (20), Expect = 2.9 Identities = 38/44 (86%) Strand = Plus / Plus Query: 184 cctccagcagcccgtggtacggccccgaccgcgtgctctacctc 227 ||||| ||||||| |||||||| | ||||| |||||||||||| Sbjct: 143 cctccggcagcccatggtacggtgctgaccgtgtgctctacctc 186
>ref|NM_187740.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2655 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 419 gcagcccgtggtacggacccaaccgcgt 392
>gb|AC125291.3| Drosophila melanogaster X BAC CH221-17A11 (CHORI Sheared BAC Drosophila melanogaster library) complete sequence Length = 166613 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 68856 cagtcgcagcagcagccgca 68837
>ref|XM_976294.1| PREDICTED: Mus musculus similar to zinc finger and BTB domain containing 10 (LOC669642), mRNA Length = 7573 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1013 acgtcctcggcggcggccgc 994
>ref|XM_485202.4| PREDICTED: Mus musculus zinc finger and BTB domain containing 10, transcript variant 1 (Zbtb10), mRNA Length = 7702 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1070 acgtcctcggcggcggccgc 1051
>ref|XM_979038.1| PREDICTED: Mus musculus zinc finger and BTB domain containing 10 (Zbtb10), mRNA Length = 6568 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 29 acgtcctcggcggcggccgc 10
>ref|XM_799661.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053505229.20) partial mRNA Length = 1686 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 473 acgaccatggcgctctcctc 454
>ref|XM_805848.1| Trypanosoma cruzi strain CL Brener hypothetical protein (Tc00.1047053510823.20) partial mRNA Length = 1659 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 81 acgaccatggcgctctcctc 100 |||||||||||||||||||| Sbjct: 467 acgaccatggcgctctcctc 448
>ref|XM_845200.1| PREDICTED: Canis familiaris similar to calmodulin-binding transcription activator 1 (LOC608237), mRNA Length = 7849 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 cgtcctcggcggcggccgca 150 |||||||||||||||||||| Sbjct: 1214 cgtcctcggcggcggccgca 1233
>gb|AC005482.2| Homo sapiens PAC clone RP4-736H5 from 7, complete sequence Length = 148656 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 177 gctgccacctccagcagccc 196 |||||||||||||||||||| Sbjct: 72320 gctgccacctccagcagccc 72339
>gb|AE016795.2| Vibrio vulnificus CMCP6 chromosome I complete sequence Length = 3281944 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 accgcggccaaggctgccac 184 |||||||||||||||||||| Sbjct: 863107 accgcggccaaggctgccac 863088
>gb|CP000272.1| Burkholderia xenovorans LB400 chromosome 3, complete sequence Length = 1471779 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 102 cccgcgatgaagctcgccgg 121 |||||||||||||||||||| Sbjct: 650678 cccgcgatgaagctcgccgg 650659
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 129 tacgtcctcggcggcggccg 148 |||||||||||||||||||| Sbjct: 3807238 tacgtcctcggcggcggccg 3807257
>emb|AL939127.1|SCO939127 Streptomyces coelicolor A3(2) complete genome; segment 24/29 Length = 290850 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 1001 acgtcctcggcggcggccgc 1020
>emb|AL939126.1|SCO939126 Streptomyces coelicolor A3(2) complete genome; segment 23/29 Length = 295150 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 ccacctccagcagcccgtgg 200 |||||||||||||||||||| Sbjct: 270973 ccacctccagcagcccgtgg 270954
>gb|AY131229.2| Streptomyces sp. 139 exopolysaccharide gene cluster, complete sequence Length = 31310 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 180 gccacctccagcagcccgtg 199 |||||||||||||||||||| Sbjct: 28821 gccacctccagcagcccgtg 28802
>gb|AC023709.4| Drosophila melanogaster X BAC RP98-10I17 (Roswell Park Cancer Institute Drosophila BAC Library) complete sequence Length = 163710 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 30160 cagtcgcagcagcagccgca 30141
>gb|AC104428.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1123F12, complete sequence Length = 103330 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Minus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 6570 gcagcccgtggtacggacccaaccgcgt 6543
>dbj|BA000037.2| Vibrio vulnificus YJ016 DNA, chromosome I, complete sequence Length = 3354505 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 accgcggccaaggctgccac 184 |||||||||||||||||||| Sbjct: 248359 accgcggccaaggctgccac 248378
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 40.1 bits (20), Expect = 2.9 Identities = 26/28 (92%) Strand = Plus / Plus Query: 190 gcagcccgtggtacggccccgaccgcgt 217 |||||||||||||||| ||| ||||||| Sbjct: 21458 gcagcccgtggtacggacccaaccgcgt 21485
>gb|AC161384.4| Gallus gallus BAC clone CH261-69B2 from chromosome ul, complete sequence Length = 186366 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 171 gccaaggctgccacctccag 190 |||||||||||||||||||| Sbjct: 153730 gccaaggctgccacctccag 153711
>emb|X54856.1|CMCAB C.moewusii cab mRNA for chlorophyll a/b binding protein Length = 1011 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 197 gtggtacggccccgaccgcg 216 |||||||||||||||||||| Sbjct: 146 gtggtacggccccgaccgcg 165
>gb|AE003451.5| Drosophila melanogaster chromosome X, section 35 of 74 of the complete sequence Length = 285729 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 15 cagtcgcagcagcagccgca 34 |||||||||||||||||||| Sbjct: 212586 cagtcgcagcagcagccgca 212605
>gb|AY664419.1| Zea mays cultivar Mo17 locus 9009, complete sequence Length = 405672 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 248962 acgtcctcggcggcggccgc 248943
>gb|AY664415.1| Zea mays cultivar B73 locus 9009, complete sequence Length = 323584 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 252446 acgtcctcggcggcggccgc 252427
>gb|AC126450.4| Mus musculus BAC clone RP23-379J7 from 3, complete sequence Length = 159914 Score = 40.1 bits (20), Expect = 2.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 acgtcctcggcggcggccgc 149 |||||||||||||||||||| Sbjct: 64191 acgtcctcggcggcggccgc 64210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 2,074,758 Number of Sequences: 3902068 Number of extensions: 2074758 Number of successful extensions: 151595 Number of sequences better than 10.0: 94 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 149307 Number of HSP's gapped (non-prelim): 2286 length of query: 227 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 205 effective length of database: 17,147,199,772 effective search space: 3515175953260 effective search space used: 3515175953260 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
