| Clone Name | baet79a08 |
|---|---|
| Clone Library Name | barley_pub |
>SMUF1_HUMAN (Q9HCE7) Smad ubiquitination regulatory factor 1 (EC 6.3.2.-)| (Ubiquitin--protein ligase SMURF1) (Smad-specific E3 ubiquitin ligase 1) (hSMURF1) Length = 757 Score = 29.3 bits (64), Expect = 2.7 Identities = 15/46 (32%), Positives = 24/46 (52%) Frame = +2 Query: 128 HRPPILPAGVDEATGVTSKDVVLDADTGLSVRLYLPKLQDPSAKLP 265 H+ P LP G ++ T V + L TG+S + P++ PS +P Sbjct: 231 HQSPELPEGYEQRTTVQGQVYFLHTQTGVST-WHDPRIPSPSGTIP 275
>GI1L3_ARATH (Q940G6) Probable gibberellin receptor GID1L3 (EC 3.-.-.-)| (GID1-like protein 3) Length = 344 Score = 29.3 bits (64), Expect = 2.7 Identities = 13/31 (41%), Positives = 18/31 (58%) Frame = +2 Query: 143 LPAGVDEATGVTSKDVVLDADTGLSVRLYLP 235 +PA + GV S DV++D T L R+Y P Sbjct: 53 VPANANPVNGVFSFDVIIDRQTNLLSRVYRP 83
>CATA_STRCO (Q9Z598) Catalase (EC 1.11.1.6)| Length = 487 Score = 28.9 bits (63), Expect = 3.6 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 3/44 (6%) Frame = +2 Query: 5 HQGPSQTPSPLSTAMDADADTVVFEAPAHFR---FYKSGKIERL 127 + GP++T +PL+ + T EAP H + F ++G + RL Sbjct: 390 YDGPAETGTPLAAPLAVSGHTGTHEAPLHTKDDHFVQAGALYRL 433
>MFNA_HALSA (Q9HSA3) L-tyrosine decarboxylase (EC 4.1.1.25) (TDC)| Length = 355 Score = 28.9 bits (63), Expect = 3.6 Identities = 19/57 (33%), Positives = 27/57 (47%) Frame = +2 Query: 50 DADADTVVFEAPAHFRFYKSGKIERLHRPPILPAGVDEATGVTSKDVVLDADTGLSV 220 DADA VV A AHF F K+ + + + P D V + ++D DT + V Sbjct: 93 DADAVNVVAPASAHFSFQKAADVLGVEL-RLAPTDGDHRADVAAVADLVDGDTAVVV 148
>Y567_BUCAP (Q8K902) Hypothetical transport protein BUsg567| Length = 413 Score = 28.1 bits (61), Expect = 6.1 Identities = 14/38 (36%), Positives = 25/38 (65%) Frame = -1 Query: 123 RSILPLL*KRKCAGASNTTVSASASMAVESGDGVWLGP 10 +SILP+ K+ C A+ +++S SA+ A S +++GP Sbjct: 56 QSILPVFSKQFCLTATESSLSLSAATATMSIGTLFIGP 93
>MMP3_HUMAN (P08254) Stromelysin-1 precursor (EC 3.4.24.17) (Matrix| metalloproteinase-3) (MMP-3) (Transin-1) (SL-1) Length = 477 Score = 28.1 bits (61), Expect = 6.1 Identities = 13/19 (68%), Positives = 15/19 (78%) Frame = +2 Query: 137 PILPAGVDEATGVTSKDVV 193 P LP+GVD A VTSKD+V Sbjct: 334 PSLPSGVDAAYEVTSKDLV 352
>GID1_ORYSA (Q6L545) Gibberellin receptor GID1 (EC 3.-.-.-)| (Gibberellin-insensitive dwarf protein 1) (Protein GIBBERELLIN INSENSITIVE DWARF1) Length = 354 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/29 (41%), Positives = 17/29 (58%) Frame = +2 Query: 143 LPAGVDEATGVTSKDVVLDADTGLSVRLY 229 +PA GV+S D ++D GL VR+Y Sbjct: 53 VPANARPLEGVSSFDHIIDQSVGLEVRIY 81 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.313 0.133 0.404 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,858,561 Number of Sequences: 219361 Number of extensions: 564677 Number of successful extensions: 1487 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1444 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1487 length of database: 80,573,946 effective HSP length: 67 effective length of database: 65,876,759 effective search space used: 1581042216 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.2 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 42 (21.9 bits)