Clone Information

BLAST Search Result

Clone Name	baet79a05
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast...	97	1e-20
2	CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloropl...	81	6e-16
3	CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast...	80	1e-15
4	CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chlorop...	78	7e-15
5	CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloropla...	78	7e-15
6	CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloropl...	77	1e-14
7	CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloropla...	77	1e-14
8	CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloropl...	76	2e-14
9	CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chlorop...	76	2e-14
10	CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloropl...	75	3e-14
11	CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloropla...	75	3e-14
12	CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloropl...	75	3e-14
13	CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloropla...	75	4e-14
14	CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloropla...	75	4e-14
15	CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloropl...	74	1e-13
16	CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast...	74	1e-13
17	CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloropl...	74	1e-13
18	CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloropla...	74	1e-13
19	CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloropl...	74	1e-13
20	CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloropla...	73	2e-13
21	CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast...	73	2e-13
22	CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chlorop...	72	4e-13
23	CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 membe...	72	5e-13
24	CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloropla...	71	6e-13
25	CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloropla...	71	6e-13
26	CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chl...	71	8e-13
27	CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloropl...	71	8e-13
28	CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloropla...	70	1e-12
29	CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloropl...	70	1e-12
30	CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 membe...	70	2e-12
31	CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloropl...	69	3e-12
32	CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast...	69	3e-12
33	CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast...	69	3e-12
34	CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII typ...	69	3e-12
35	CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloropl...	68	5e-12
36	CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 membe...	64	1e-10
37	CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII ty...	63	2e-10
38	CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloropla...	58	5e-09
39	CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloropl...	55	4e-08
40	CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII typ...	55	6e-08
41	CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloropla...	54	8e-08
42	CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloropl...	54	8e-08
43	CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloropla...	54	8e-08
44	CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloropl...	54	8e-08
45	CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chlorop...	54	1e-07
46	CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast...	54	1e-07
47	CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast...	54	1e-07
48	CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII typ...	53	2e-07
49	CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast ...	53	2e-07
50	CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloropla...	53	2e-07
51	CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chlo...	52	3e-07
52	CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type...	50	1e-06
53	CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chlorop...	48	7e-06
54	CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type...	44	1e-04
55	CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII typ...	43	2e-04
56	CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type...	40	0.001
57	HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC ...	33	0.25
58	HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (...	32	0.42
59	HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydr...	32	0.42
60	PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99....	32	0.55
61	CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloro...	32	0.55
62	HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4....	30	1.2
63	NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleop...	30	1.6
64	HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC ...	30	1.6
65	NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleop...	30	1.6
66	NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleopor...	30	1.6
67	HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC ...	30	2.1
68	TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2....	30	2.1
69	CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)	29	2.7
70	PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, ...	29	2.7
71	HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC ...	29	2.7
72	HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC ...	29	3.5
73	HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC ...	29	3.5
74	ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB...	29	3.5
75	RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)	28	4.6
76	HIS7_GLOVI (Q7NMJ6) Imidazoleglycerol-phosphate dehydratase (EC ...	28	6.0
77	XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (E...	28	6.0
78	PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EII...	28	7.9
79	HIS7_PROMM (Q7V4R6) Imidazoleglycerol-phosphate dehydratase (EC ...	28	7.9
80	TEAD4_MOUSE (Q62296) Transcriptional enhancer factor TEF-3 (TEA ...	28	7.9
81	GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 p...	28	7.9
82	CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)	28	7.9

>CB21_WHEAT (P04784) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 266

 Score = 96.7 bits (239), Expect = 1e-20
 Identities = 45/66 (68%), Positives = 48/66 (72%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAGK VK+LPSS+L G+                SSSPWYGSDRVLYLGPLSGEPPSYLTG
Sbjct: 13  FAGKAVKNLPSSALIGDARVNMRKTAAKAKQVSSSSPWYGSDRVLYLGPLSGEPPSYLTG 72

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 73  EFPGDY 78

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>CB29_MAIZE (P27497) Chlorophyll a-b binding protein M9, chloroplast precursor|
           (LHCII type I CAB-M9) (LHCP)
          Length = 265

 Score = 81.3 bits (199), Expect = 6e-16
 Identities = 44/67 (65%), Positives = 46/67 (68%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK V ++PSS LFGE                SS SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSS-LFGEARVTMRKTAAKAKPAASSGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 71  GEFPGDY 77

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>CB22_MAIZE (P06671) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 265

 Score = 80.5 bits (197), Expect = 1e-15
 Identities = 43/67 (64%), Positives = 45/67 (67%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXX-XXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK V ++PSSS FGE                 S SPWYG DRVLYLGPLSGEPPSYLT
Sbjct: 13  FAGKAV-NVPSSS-FGEARVTMRKTAAKAKPAAASGSPWYGPDRVLYLGPLSGEPPSYLT 70

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 71  GEFPGDY 77

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>CB22_PETSP (P04780) Chlorophyll a-b binding protein 22L, chloroplast precursor|
           (LHCII type I CAB-22L) (LHCP)
          Length = 267

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 40/67 (59%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGKVVK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKVVKLSPSSSEITGNGKATMRKTATKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB21_ORYSA (P12330) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 265

 Score = 77.8 bits (190), Expect = 7e-15
 Identities = 38/57 (66%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
 Frame = +2

Query: 116 SSSLFGEXXXXXXXXXXXXXXXXSS-SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           SS+LFGE                SS SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDY
Sbjct: 21  SSALFGEARITMRKTAAKPKPAASSGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 77

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>CB24_TOBAC (P27495) Chlorophyll a-b binding protein 40, chloroplast precursor|
           (LHCII type I CAB-40) (LHCP)
          Length = 267

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKTVSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB22_ORYSA (P12331) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 261

 Score = 76.6 bits (187), Expect = 1e-14
 Identities = 34/56 (60%), Positives = 38/56 (67%)
 Frame = +2

Query: 116 SSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           ++ +FGE                S SPWYG+DRVLYLGPLSGEPPSYLTGEFPGDY
Sbjct: 18  AAKVFGEGRITMRKSAAKPKPAASGSPWYGADRVLYLGPLSGEPPSYLTGEFPGDY 73

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>CB2G_LYCES (P07369) Chlorophyll a-b binding protein 3C, chloroplast precursor|
           (LHCII type I CAB-3C) (LHCP)
          Length = 267

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGRVTMRKTATKAKPASSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB25_PETSP (P04783) Chlorophyll a-b binding protein 91R, chloroplast precursor|
           (LHCII type I CAB-91R) (LHCP)
          Length = 267

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKFSPSSSEITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB25_TOBAC (P27496) Chlorophyll a-b binding protein 50, chloroplast precursor|
           (LHCII type I CAB-50) (LHCP)
          Length = 267

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTVTKAKPLSSGSPWYGPDRVKYLGPFSGESPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB23_NICPL (P12469) Chlorophyll a-b binding protein C, chloroplast precursor|
           (LHCII type I CAB-C) (LHCP)
          Length = 267

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 39/67 (58%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 SSSPWYG +RV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSPSSSEITGNGKVTMRKTASKAKPVSSSSPWYGPNRVKYLGPFSGESPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB21_TOBAC (P27492) Chlorophyll a-b binding protein 16, chloroplast precursor|
           (LHCII type I CAB-16) (LHCP)
          Length = 266

 Score = 75.5 bits (184), Expect = 3e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTASKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 72  GEFPGDY 78

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>CB25_NICPL (P12470) Chlorophyll a-b binding protein E, chloroplast precursor|
           (LHCII type I CAB-E) (LHCP)
          Length = 266

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 39/67 (58%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 12  FAGKAVKLSPSSSEVTGNGKVTMRKTANKAKPVSSGSPWYGPDRVKYLGPFSGESPSYLT 71

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 72  GEFPGDY 78

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>CB21_SINAL (P13851) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 266

 Score = 75.1 bits (183), Expect = 4e-14
 Identities = 40/67 (59%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK  P +S +FG                 S SPWYGSDRV YLGP SGEPPSYLT
Sbjct: 13  FAGKAVKLSPGASEVFG--TGRVTMRKTVKPTGPSGSPWYGSDRVKYLGPFSGEPPSYLT 70

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 71  GEFPGDY 77

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>CB22_PEA (P07371) Chlorophyll a-b binding protein AB80, chloroplast|
           precursor (LHCII type I CAB-AB80) (LHCP)
          Length = 269

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 36/65 (55%), Positives = 37/65 (56%)
 Frame = +2

Query: 89  AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 268
           AGK +K  PSS   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 17  AGKQLKLNPSSQELGAARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGE 76

Query: 269 FPGDY 283
           FPGDY
Sbjct: 77  FPGDY 81

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>CB2A_SPIOL (P12333) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 267

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 38/66 (57%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
 Frame = +2

Query: 89  AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           AGK VK  P++S + GE                SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKLGPTASEIIGEGRITMRKTAGKPKTVQSSSPWYGPDRVKYLGPFSGESPSYLTG 73

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 74  EFPGDY 79

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>CB24_PETSP (P04782) Chlorophyll a-b binding protein 25, chloroplast precursor|
           (LHCII type I CAB-25) (LHCP)
          Length = 266

 Score = 73.9 bits (180), Expect = 1e-13
 Identities = 36/66 (54%), Positives = 37/66 (56%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAGK V    SS + G                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSQITGNGKATMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 73  EFPGDY 78

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>CB27_TOBAC (P27491) Chlorophyll a-b binding protein 7, chloroplast precursor|
           (LHCII type I CAB-7) (LHCP)
          Length = 267

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 38/67 (56%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAG  VK  PSSS + G                 S SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGNAVKLSPSSSEITGNGKAIMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 73  GEFPGDY 79

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>CB48_MAIZE (Q00827) Chlorophyll a-b binding protein 48, chloroplast precursor|
           (LHCII type I CAB-48) (LHCP)
          Length = 264

 Score = 73.6 bits (179), Expect = 1e-13
 Identities = 33/53 (62%), Positives = 35/53 (66%)
 Frame = +2

Query: 125 LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           +FGE                S SPWYG+DRVLYLGPLSG PPSYLTGEFPGDY
Sbjct: 24  VFGEGRITMRKTAAKPKPARSGSPWYGADRVLYLGPLSGSPPSYLTGEFPGDY 76

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>CB22_ARATH (P04778) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (CAB-140) (LHCP)
          Length = 267

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 37/66 (56%), Positives = 39/66 (59%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAGK VK  P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVKLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 73  EFPGDY 78

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>CB23_APIGR (P92919) Chlorophyll a-b binding protein, chloroplast precursor|
           (Allergen Api g 3)
          Length = 264

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 40/66 (60%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
 Frame = +2

Query: 89  AGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           AGK VK  PSSS LFG                 S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 14  AGKAVKVAPSSSELFGNGRVSMRKTVKAPV---SDSPWYGPDRVKYLGPFSGEAPSYLTG 70

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 71  EFPGDY 76

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>CB23_PETSP (P04781) Chlorophyll a-b binding protein 22R, chloroplast precursor|
           (LHCII type I CAB-22R) (LHCP)
          Length = 267

 Score = 72.0 bits (175), Expect = 4e-13
 Identities = 38/67 (56%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK   SSS + G                 SSSPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKLSSSSSEITGNGKVTMRKTVTKAKPASSSSPWYGPDRVKYLGPFSGEAPSYLT 72

Query: 263 GEFPGDY 283
           GEFP DY
Sbjct: 73  GEFPSDY 79

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>CB2B_PINSY (P15194) Chlorophyll a-b binding protein type 2 member 1B,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1B) (CAB) (LHCP)
          Length = 274

 Score = 71.6 bits (174), Expect = 5e-13
 Identities = 30/33 (90%), Positives = 31/33 (93%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S+SPWYG DRVLYLGP SGEPPSYLTGEFPGDY
Sbjct: 54  STSPWYGPDRVLYLGPFSGEPPSYLTGEFPGDY 86

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>CB22_HORVU (P08963) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 264

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 38/67 (56%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
 Frame = +2

Query: 86  FAGKVVKDLPSSS-LFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLT 262
           FAGK VK+L SSS + G+                  SPWYG DRV YLGP SGE PSYLT
Sbjct: 13  FAGKAVKNLSSSSEVQGDARVSMRKTAATKKV---GSPWYGPDRVKYLGPFSGESPSYLT 69

Query: 263 GEFPGDY 283
           GEFPGDY
Sbjct: 70  GEFPGDY 76

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>CB23_SOYBN (P09756) Chlorophyll a-b binding protein 3, chloroplast precursor|
           (LHCII type I CAB-3) (LHCP)
          Length = 263

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 37/65 (56%), Positives = 38/65 (58%)
 Frame = +2

Query: 89  AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 268
           AGK VK  PS+   G                 S SPWYG DRV YLGP SGEPPSYLTGE
Sbjct: 15  AGKAVKLGPSAPEVGRVSMRKTVTKQVS----SGSPWYGPDRVKYLGPFSGEPPSYLTGE 70

Query: 269 FPGDY 283
           FPGDY
Sbjct: 71  FPGDY 75

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>CB21_ARATH (P04777) Chlorophyll a-b binding protein 165/180, chloroplast|
           precursor (LHCII type I CAB-165/180)
          Length = 267

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 36/66 (54%), Positives = 38/66 (57%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAGK V   P++S                    S SPWYGSDRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNLSPAASEVLGSGRVTMRKTVAKPKGPSGSPWYGSDRVKYLGPFSGESPSYLTG 72

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 73  EFPGDY 78

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>CB2B_LYCES (P07370) Chlorophyll a-b binding protein 1B, chloroplast precursor|
           (LHCII type I CAB-1B) (LHCP)
          Length = 265

 Score = 70.9 bits (172), Expect = 8e-13
 Identities = 37/66 (56%), Positives = 39/66 (59%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAG+ VK  PS+S                    SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSASEIS-GNGRITMRKAVAKSAPSSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 72  EFPGDY 77

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>CB21_MAIZE (P12329) Chlorophyll a-b binding protein 1, chloroplast precursor|
           (LHCII type I CAB-1) (LHCP)
          Length = 262

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 32/52 (61%), Positives = 32/52 (61%)
 Frame = +2

Query: 128 FGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           FGE                S SPWYG DRV YLGP SGEPPSYLTGEFPGDY
Sbjct: 23  FGEGRITMRKTVGKPKVAASGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 74

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>CB21_PETSP (P04779) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type I CAB-13) (LHCP)
          Length = 266

 Score = 70.5 bits (171), Expect = 1e-12
 Identities = 35/66 (53%), Positives = 36/66 (54%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAGK V    SS +                   S SPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGKAVNVPSSSEITRNGKVTMRKTVTKAKPVSSGSPWYGPDRVKYLGPFSGEAPSYLTG 72

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 73  EFPGDY 78

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>CB2A_PINSY (P15193) Chlorophyll a-b binding protein type 2 member 1A,|
           chloroplast precursor (Chlorophyll a-b binding protein
           type II 1A) (CAB) (LHCP)
          Length = 278

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 29/31 (93%), Positives = 29/31 (93%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           SPWYG DRVLYLGP SGEPPSYLTGEFPGDY
Sbjct: 60  SPWYGPDRVLYLGPFSGEPPSYLTGEFPGDY 90

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>CB2A_PYRPY (P24006) Chlorophyll a-b binding protein 1A, chloroplast precursor|
           (LHCII type II CAB-1A) (LHCP)
          Length = 278

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           SPWYG DRV+YLGP SGEPPSYLTGEFPGDY
Sbjct: 60  SPWYGPDRVMYLGPFSGEPPSYLTGEFPGDY 90

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>CB28_PEA (P27490) Chlorophyll a-b binding protein 8, chloroplast precursor|
           (LHCII type I CAB-8)
          Length = 268

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 32/57 (56%), Positives = 32/57 (56%)
 Frame = +2

Query: 113 PSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           PSS   G                 S SPWYG DRV YLGP SGE PSYLTGEFPGDY
Sbjct: 24  PSSQELGGARFTMRKSATTKKVASSGSPWYGPDRVKYLGPFSGESPSYLTGEFPGDY 80

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>CB21_SOYBN (P12471) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 245

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDY
Sbjct: 25  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 57

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>CB21_CUCSA (P08221) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP) (Fragment)
          Length = 255

 Score = 68.9 bits (167), Expect = 3e-12
 Identities = 29/33 (87%), Positives = 29/33 (87%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S SPWYG DRV YLGP SGEPPSYLTGEFPGDY
Sbjct: 35  SGSPWYGPDRVKYLGPFSGEPPSYLTGEFPGDY 67

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>CB22_TOBAC (P27493) Chlorophyll a-b binding protein 21, chloroplast precursor|
           (LHCII type I CAB-21) (LHCP)
          Length = 265

 Score = 68.2 bits (165), Expect = 5e-12
 Identities = 36/66 (54%), Positives = 38/66 (57%)
 Frame = +2

Query: 86  FAGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTG 265
           FAG+ VK  PS+                     SSSPWYG DRV YLGP SGE PSYLTG
Sbjct: 13  FAGQAVKLSPSAPEI-TGNGRVSMRKTVAKPVASSSPWYGPDRVKYLGPFSGESPSYLTG 71

Query: 266 EFPGDY 283
           EFPGDY
Sbjct: 72  EFPGDY 77

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>CB23_POLMU (P15195) Chlorophyll a-b binding protein type 1 member F3,|
           chloroplast precursor (DE Chlorophyll a-b binding
           protein type I F3) (CAB-F3) (LHCP)
          Length = 265

 Score = 63.5 bits (153), Expect = 1e-10
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S S WYGSDR LYLGP SG PPSYL+GEFPGDY
Sbjct: 45  SGSIWYGSDRPLYLGPFSGSPPSYLSGEFPGDY 77

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>CB21_PEA (P04159) Chlorophyll a-b binding protein AB96 (LHCII type I|
           CAB-AB96) (LHCP) (Major 15) (Fragment)
          Length = 228

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 27/33 (81%), Positives = 28/33 (84%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           SSSPW+G D V YLGP SGE PSYLTGEFPGDY
Sbjct: 8   SSSPWHGPDGVKYLGPFSGESPSYLTGEFPGDY 40

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>CB22_SOYBN (P09755) Chlorophyll a-b binding protein 2, chloroplast precursor|
           (LHCII type I CAB-2) (LHCP)
          Length = 256

 Score = 58.2 bits (139), Expect = 5e-09
 Identities = 31/63 (49%), Positives = 34/63 (53%)
 Frame = +2

Query: 89  AGKVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGE 268
           AG+ +K  PS+   G                 S SPWYG DRV YLGP SGE PSYLTGE
Sbjct: 14  AGQAMKLAPSTPELG--VGRVSMRKTAPKTVSSGSPWYGPDRVKYLGPFSGEAPSYLTGE 71

Query: 269 FPG 277
           F G
Sbjct: 72  FHG 74

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>CB23_LYCES (P27489) Chlorophyll a-b binding protein 13, chloroplast precursor|
           (LHCII type III CAB-13)
          Length = 265

 Score = 55.5 bits (132), Expect = 4e-08
 Identities = 23/33 (69%), Positives = 25/33 (75%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S+  WYG DRV YLGP S + PSYL GEFPGDY
Sbjct: 43  SNDLWYGPDRVKYLGPFSAQTPSYLNGEFPGDY 75

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>CB23_HORVU (P27523) Chlorophyll a-b binding protein of LHCII type III,|
           chloroplast precursor (CAB)
          Length = 268

 Score = 54.7 bits (130), Expect = 6e-08
 Identities = 22/29 (75%), Positives = 23/29 (79%)
 Frame = +2

Query: 197 WYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           WYG DRV YLGP S + PSYL GEFPGDY
Sbjct: 50  WYGPDRVKYLGPFSAQTPSYLNGEFPGDY 78

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>CB25_LYCES (P14279) Chlorophyll a-b binding protein 5, chloroplast precursor|
           (LHCII type I CAB-5) (LHCP) (Fragment)
          Length = 237

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 19  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDY 49

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>CB26_PETSP (P12062) Chlorophyll a-b binding protein 37, chloroplast precursor|
           (LHCII type I CAB-37) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDY 77

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>CB24_LYCES (P14278) Chlorophyll a-b binding protein 4, chloroplast precursor|
           (LHCII type I CAB-4) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDY 77

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>CB23_TOBAC (P27494) Chlorophyll a-b binding protein 36, chloroplast precursor|
           (LHCII type I CAB-36) (LHCP)
          Length = 265

 Score = 54.3 bits (129), Expect = 8e-08
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 47  SIWYGEDRPKYLGPFSEQTPSYLTGEFPGDY 77

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>CB21_GOSHI (P27518) Chlorophyll a-b binding protein 151, chloroplast precursor|
           (LHCII type II CAB-151) (LHCP)
          Length = 265

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = +2

Query: 188 SSPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           +S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 46  TSIWYGPDRPKYLGPFSDQIPSYLTGEFPGDY 77

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>CB21_SILPR (P12332) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP) (Fragment)
          Length = 205

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 46  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDY 76

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>CB23_ORYSA (P27519) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 263

 Score = 53.9 bits (128), Expect = 1e-07
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 45  SIWYGPDRPKYLGPFSEQTPSYLTGEFPGDY 75

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>CB21_LEMGI (P12328) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 264

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 22/31 (70%), Positives = 25/31 (80%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG+DR  +LGP S + PSYLTGEFPGDY
Sbjct: 46  SIWYGADRPKFLGPFSEQTPSYLTGEFPGDY 76

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>CB2_PHYPA (P20866) Chlorophyll a-b binding protein, chloroplast precursor|
           (LHCII type I CAB) (LHCP)
          Length = 269

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 27/63 (42%), Positives = 32/63 (50%)
 Frame = +2

Query: 95  KVVKDLPSSSLFGEXXXXXXXXXXXXXXXXSSSPWYGSDRVLYLGPLSGEPPSYLTGEFP 274
           K V +L S  + G                 S + WYG+DR  +LGP SGE PSYL GEF 
Sbjct: 19  KPVNEL-SRKVLGNVEARVTMRRTVSKSAGSDTIWYGADRPKFLGPFSGETPSYLNGEFA 77

Query: 275 GDY 283
           GDY
Sbjct: 78  GDY 80

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>CB23_PEA (P27520) Chlorophyll a-b binding protein 215, chloroplast precursor|
           (LHCII type II CAB-215) (LHCP)
          Length = 265

 Score = 53.1 bits (126), Expect = 2e-07
 Identities = 23/31 (74%), Positives = 24/31 (77%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S + PSYLTGEFPGDY
Sbjct: 47  SIWYGPDRPKYLGPFSEQIPSYLTGEFPGDY 77

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>CB21_PINTH (P10049) Chlorophyll a-b binding protein type I, chloroplast|
           precursor (CAB) (LHCP)
          Length = 266

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 23/31 (74%), Positives = 23/31 (74%)
 Frame = +2

Query: 191 SPWYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           S WYG DR  YLGP S   PSYLTGEFPGDY
Sbjct: 48  SIWYGPDRPKYLGPFSEGTPSYLTGEFPGDY 78

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>CB2_CHLMO (P22686) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 256

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 20/29 (68%), Positives = 22/29 (75%)
 Frame = +2

Query: 197 WYGSDRVLYLGPLSGEPPSYLTGEFPGDY 283
           WYG DR  +LGP S   P+YLTGEFPGDY
Sbjct: 39  WYGPDRAKWLGPFSTNTPAYLTGEFPGDY 67

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>CB2_MALDO (P15773) Chlorophyll a-b binding protein AB10, chloroplast|
           precursor (LHCII type I CAB-AB10) (LHCP)
          Length = 268

 Score = 47.8 bits (112), Expect = 7e-06
 Identities = 21/24 (87%), Positives = 21/24 (87%)
 Frame = +2

Query: 212 RVLYLGPLSGEPPSYLTGEFPGDY 283
           RV YLGP SGE PSYLTGEFPGDY
Sbjct: 58  RVKYLGPFSGEWPSYLTGEFPGDY 81

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>CB2_DUNTE (P27517) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 43.5 bits (101), Expect = 1e-04
 Identities = 19/30 (63%), Positives = 22/30 (73%), Gaps = 1/30 (3%)
 Frame = +2

Query: 197 WYGSDRVLYLGPLS-GEPPSYLTGEFPGDY 283
           +YG DR  +LGP S  + P YLTGEFPGDY
Sbjct: 33  FYGPDRAKFLGPFSENDTPEYLTGEFPGDY 62

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>CB22_CUCSA (P08222) Chlorophyll a-b binding protein of LHCII type 1|
           (Chlorophyll a-b binding protein of LHCII type I) (CAB)
           (LHCP) (Fragment)
          Length = 206

 Score = 42.7 bits (99), Expect = 2e-04
 Identities = 17/18 (94%), Positives = 17/18 (94%)
 Frame = +2

Query: 230 PLSGEPPSYLTGEFPGDY 283
           P SGEPPSYLTGEFPGDY
Sbjct: 1   PFSGEPPSYLTGEFPGDY 18

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>CB2_CHLRE (P14273) Chlorophyll a-b binding protein of LHCII type I,|
           chloroplast precursor (CAB) (LHCP)
          Length = 253

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 19/34 (55%), Positives = 23/34 (67%), Gaps = 1/34 (2%)
 Frame = +2

Query: 185 SSSPWYGSDRVLYLGPLS-GEPPSYLTGEFPGDY 283
           S   +YG +R  +LGP S    P+YLTGEFPGDY
Sbjct: 32  SGVEFYGPNRAKWLGPYSENATPAYLTGEFPGDY 65

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>HIS7_SYNY3 (P48054) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 32.7 bits (73), Expect = 0.25
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 79
           H ++EATF AFA  +RM     P+R D      T+P+  G
Sbjct: 175 HHIIEATFKAFARAMRMAIEVDPRRAD------TIPSSKG 208

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>HIS7A_ARATH (P34047) Imidazoleglycerol-phosphate dehydratase 1 (EC 4.2.1.19)|
           (IGPD 1)
          Length = 270

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 17/43 (39%), Positives = 22/43 (51%)
 Frame = -2

Query: 207 EPYHGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 79
           E  H ++EATF AFA  LR  T   P+R        T+P+  G
Sbjct: 229 ENSHHIIEATFKAFARALRQATETDPRRGG------TIPSSKG 265

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>HIS7B_ARATH (O23346) Probable imidazoleglycerol-phosphate dehydratase 2 (EC|
           4.2.1.19) (IGPD 2)
          Length = 259

 Score = 32.0 bits (71), Expect = 0.42
 Identities = 16/40 (40%), Positives = 22/40 (55%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAG 79
           H ++EATF AFA  LR  T + P+R        T+P+  G
Sbjct: 221 HHIIEATFKAFARALRQATESDPRRGG------TIPSSKG 254

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>PQQF_PSEPK (Q88QV3) Coenzyme PQQ synthesis protein F (EC 3.4.99.-)|
           (Pyrroloquinoline quinone biosynthesis protein F)
          Length = 766

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -1

Query: 199 PRAAGGNLLGLCRRLAHGDASLPEKRRRWQVLH 101
           P A GG L  LC+ LA  D  +  +RR  +V+H
Sbjct: 96  PNALGGGLERLCQMLAEPDLGIERQRREREVIH 128

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>CB26_ARATH (Q9XF89) Chlorophyll a-b binding protein CP26, chloroplast|
           precursor (Light-harvesting complex II protein 5)
           (LHCB5) (LHCIIc)
          Length = 280

 Score = 31.6 bits (70), Expect = 0.55
 Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 3/32 (9%)
 Frame = +2

Query: 197 WYGSDRVLYL--GPLS-GEPPSYLTGEFPGDY 283
           WYG DR ++L  G L   E P YL GE  GDY
Sbjct: 62  WYGPDRRIFLPDGLLDRSEIPEYLNGEVAGDY 93

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>HIS7_PEA (Q43072) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 281

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EATF AFA  LR  T   P+R
Sbjct: 243 HHIIEATFKAFARALRQATEYDPRR 267

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>NUP88_HUMAN (Q99567) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 741

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 125 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 24
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 450 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 483

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>HIS7_SYNEL (Q8DMI3) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EATF AFA  LRM     P+R
Sbjct: 173 HHIIEATFKAFARALRMAIALDPRR 197

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>NUP88_MOUSE (Q8CEC0) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein)
          Length = 753

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 125 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 24
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 30.0 bits (66), Expect = 1.6
 Identities = 12/34 (35%), Positives = 19/34 (55%)
 Frame = -3

Query: 125 ETTMASPSLPCRQRLGKRGTWSLPPLLSMEVLCM 24
           E  + +  LPCRQ    RG W +P +L   ++C+
Sbjct: 451 EHILCTKPLPCRQPAPIRGFWIVPDILGPTMICI 484

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>HIS7_PROMA (Q7VDQ5) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 210

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 16/41 (39%), Positives = 22/41 (53%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGE 76
           H ++EA F AFA  LRM   A P+R     S   +  +AG+
Sbjct: 163 HHIVEACFKAFAKSLRMAIEADPRRGGSIPSSKGVLEQAGD 203

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>TAOK2_XENLA (Q6GPK9) Serine/threonine-protein kinase TAO2 (EC 2.7.11.1) (Thousand|
            and one amino acid protein 2)
          Length = 1025

 Score = 29.6 bits (65), Expect = 2.1
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 188  WRQPSWPLPPSCAW*REPPRKETTMAS 108
            WRQP+   PPS +W   PP   +++++
Sbjct: 935  WRQPTLLAPPSASWGLHPPGSSSSLSA 961

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>CNTRB_MOUSE (Q8CB62) Centrobin (LYST-interacting protein 8)|
          Length = 887

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
 Frame = -3

Query: 137 PPRKETTMASPSLP--CRQRLGKRGTWSLPPL 48
           PP  +  +A PS P       G+R TW++PP+
Sbjct: 569 PPNPQAPLAEPSSPGPLEPEKGERRTWAMPPM 600

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>PDK_ASCSU (O02623) [Pyruvate dehydrogenase [lipoamide]] kinase, mitochondrial|
           precursor (EC 2.7.11.2) (Pyruvate dehydrogenase kinase)
          Length = 399

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 4/50 (8%)
 Frame = +1

Query: 1   HSWRTKYSIHKTS----IDNNGGNDHVPLFPSLCRQGSEGLAIVVSFRGG 138
           H +   + + K S    ++N+G ++ +P    +  +G+E L+I +S RGG
Sbjct: 240 HLYHIMFELFKNSMRATVENHGADEDLPPIKVMVVRGAEDLSIKISDRGG 289

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>HIS7_TRIS1 (Q93DQ9) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 213

 Score = 29.3 bits (64), Expect = 2.7
 Identities = 13/25 (52%), Positives = 16/25 (64%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EA F AFA  LRM T   P+R
Sbjct: 178 HHIIEAGFKAFARSLRMATEIDPRR 202

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>HIS7_ANASP (Q05068) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 209

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EATF AFA   RM     P+R
Sbjct: 174 HHIIEATFKAFARAARMAIEVDPRR 198

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>HIS7_SYNPX (Q7U9M8) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 202

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EA F AF+  LRM T   P+R
Sbjct: 161 HHIVEACFKAFSRALRMATEIDPRR 185

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>ASB16_HUMAN (Q96NS5) Ankyrin repeat and SOCS box protein 16 (ASB-16)|
          Length = 453

 Score = 28.9 bits (63), Expect = 3.5
 Identities = 17/37 (45%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
 Frame = +3

Query: 45  QQWRQRPCPSLPQPLPAR**RTC-----HRRLFSGRL 140
           QQ R R CPS P+    R  R+C     H  LFSG L
Sbjct: 34  QQCRSRRCPSSPRARLTRPHRSCRDPAVHHALFSGNL 70

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>RANB3_HUMAN (Q9H6Z4) Ran-binding protein 3 (RanBP3)|
          Length = 567

 Score = 28.5 bits (62), Expect = 4.6
 Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = -3

Query: 224 GRGPGQSRTTGCWRQPSWPLPPSCAW-*REPPRKETTMASPSLPCRQR 84
           G  P  S  T  WR PS      CA   +EP + E++ AS    C ++
Sbjct: 205 GAVPAASPDTAAWRSPSEAADEVCALEEKEPQKNESSNASEEEACEKK 252

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>HIS7_GLOVI (Q7NMJ6) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 197

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EA+F AFA  LR+     P+R
Sbjct: 162 HHIIEASFKAFARALRLAVEIDPRR 186

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>XDHE_BACSU (O32143) Probable xanthine dehydrogenase subunit E (EC 1.17.1.4)|
           (XDHase subunit E)
          Length = 173

 Score = 28.1 bits (61), Expect = 6.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -2

Query: 117 DGKSFTTLPAKAGEERDMVVAAIVVDGGLVYAVFCSPRM 1
           DG S TT+     EE DM   A + +GG     +C+P M
Sbjct: 80  DGHSITTIEGLQKEELDMCQTAFLEEGGF-QCGYCTPGM 117

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>PTW3C_KLEPN (P45604) PTS system N-acetylglucosamine-specific EIICBA component|
           (EIICBA-Nag) (EII-Nag) [Includes: N-acetylglucosamine
           permease IIC component (PTS system
           N-acetylglucosamine-specific EIIC component);
           N-acetylglucosamine-specific phosphotrans
          Length = 651

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 14/42 (33%), Positives = 20/42 (47%)
 Frame = -2

Query: 177 FLAFAAVLRMVTRASPKRDDDGKSFTTLPAKAGEERDMVVAA 52
           FL F+AV+RM    +P R+D      T  A +  E  +   A
Sbjct: 352 FLLFSAVIRMFNLKTPGREDKAADVVTEEANSNTEEGLTQLA 393

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>HIS7_PROMM (Q7V4R6) Imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19)|
           (IGPD)
          Length = 209

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 12/25 (48%), Positives = 15/25 (60%)
 Frame = -2

Query: 198 HGLLEATFLAFAAVLRMVTRASPKR 124
           H ++EA F AFA  LRM     P+R
Sbjct: 166 HHIVEACFKAFARALRMAIEIDPRR 190

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>TEAD4_MOUSE (Q62296) Transcriptional enhancer factor TEF-3 (TEA domain family|
           member 4) (TEAD-4) (ETF-related factor 2) (ETFR-2)
           (TEF-1-related factor 1) (TEF-1-related factor FR-19)
           (RTEF-1)
          Length = 427

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 16/49 (32%), Positives = 22/49 (44%)
 Frame = -3

Query: 242 HQKVGRGRGPGQSRTTGCWRQPSWPLPPSCAW*REPPRKETTMASPSLP 96
           H K+   RGPG    +G W Q + P  P  +   +P  + T    P LP
Sbjct: 138 HSKMALARGPGYPAISGFW-QGALPGQPGTSHDVKPFSQNTYPVQPPLP 185

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>GLT3_WHEAT (P08488) Glutenin, high molecular weight subunit 12 precursor|
          Length = 660

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = -3

Query: 239 QKVGRGRGPGQSRTTGCWRQPSWPLPP 159
           Q++G+G+ P Q +  G W+Q  +P  P
Sbjct: 228 QQIGQGQQPEQGQQPGQWQQGYYPTSP 254

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>CTTB2_OTOGA (Q2QLG9) Cortactin-binding protein 2 (CortBP2)|
          Length = 1655

 Score = 27.7 bits (60), Expect = 7.9
 Identities = 15/39 (38%), Positives = 23/39 (58%)
 Frame = -2

Query: 129 KRDDDGKSFTTLPAKAGEERDMVVAAIVVDGGLVYAVFC 13
           KR  DGK   +LP K  ++R +V A++  +G L  +V C
Sbjct: 270 KRGGDGKPSLSLPRKT-KDRRLVSASVGTEGPLTRSVAC 307


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,532,398
Number of Sequences: 219361
Number of extensions: 849649
Number of successful extensions: 3024
Number of sequences better than 10.0: 82
Number of HSP's better than 10.0 without gapping: 2924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3013
length of database: 80,573,946
effective HSP length: 69
effective length of database: 65,438,037
effective search space used: 1570512888
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result