ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet79a04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetati... 50 2e-06
2VSP2_ARATH (O82122) Vegetative storage protein 2 precursor 50 2e-06
3PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (A... 49 2e-06
4S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetati... 49 4e-06
5VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetati... 49 4e-06
6VSP1_ARATH (O49195) Vegetative storage protein 1 precursor 47 8e-06
7CYF_PSINU (Q8WI07) Apocytochrome f precursor 33 0.21
8MMPL8_MYCTU (O07800) Putative membrane protein mmpL8 30 1.4
9RPOB_CYACA (Q9TM35) DNA-directed RNA polymerase beta chain (EC 2... 29 2.4
10RPOB_GRATL (Q6B8R8) DNA-directed RNA polymerase beta chain (EC 2... 29 3.1
11THII_PSEPK (Q88CY4) Thiamine biosynthesis protein thiI 28 4.0
12K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment) 28 5.3
13AAS_ECO57 (Q8X6J8) AAS bifunctional protein [Includes: 2-acylgly... 28 5.3
14PLSX_WOLSU (Q7M7Z4) Fatty acid/phospholipid synthesis protein plsX 28 5.3
15CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcin... 28 6.9
16BCTN7_SHEEP (P50415) Bactenecin-7 precursor (Bac7) (Cathelicidin... 27 9.0

>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage|
           protein B)
          Length = 254

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
 Frame = +3

Query: 180 LRPLLGSGKHAG-VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVID 356
           LR   G G+ +  V C S+ L VEAHN+R +KT+P  C      Y+ G  FR D K V  
Sbjct: 28  LRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQ 87

Query: 357 QALAY 371
           QA  Y
Sbjct: 88  QAFFY 92



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>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor|
          Length = 265

 Score = 49.7 bits (117), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +3

Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDFKVVIDQALAYVDSLKL 389
           C SW LGVE  N+ D+ TVPA+C+ YV  Y++ S  ++ D K V  +A  Y   L L
Sbjct: 52  CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLAL 108



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>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))|
          Length = 255

 Score = 49.3 bits (116), Expect = 2e-06
 Identities = 21/56 (37%), Positives = 31/56 (55%)
 Frame = +3

Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389
           C +W   VE +N+  WKT+P  C  YV  YM+G  ++ +   V D+A  Y  S+ L
Sbjct: 43  CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDL 98



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>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage|
           protein VSP25) (Fragment)
          Length = 291

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +3

Query: 216 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389
           V C SW L VEAHN+  ++T+P  C      Y+ G  +R D K V  QA  Y   L++
Sbjct: 37  VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV 94



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>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage|
           protein A)
          Length = 254

 Score = 48.5 bits (114), Expect = 4e-06
 Identities = 23/58 (39%), Positives = 31/58 (53%)
 Frame = +3

Query: 216 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389
           V C SW L VEAHN+  ++T+P  C      Y+ G  +R D K V  QA  Y   L++
Sbjct: 40  VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV 97



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>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor|
          Length = 270

 Score = 47.4 bits (111), Expect = 8e-06
 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +3

Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDFKVVIDQALAYVDSLKL 389
           C SW LGVE  N+ ++ TVPA+C+ YV  Y++ S  ++ D K V  +A  Y   L L
Sbjct: 57  CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLAL 113



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>CYF_PSINU (Q8WI07) Apocytochrome f precursor|
          Length = 321

 Score = 32.7 bits (73), Expect = 0.21
 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
 Frame = +3

Query: 111 VNIRMPTSAAD--VDEAVVA-PLIHALRPLLGSGKHAGVACDSWVLGVEAHNVRDWKTVP 281
           V+I +P S     V EAVV  P    ++ +LG+GK  G+   + ++  E   +  +  +P
Sbjct: 66  VDIEVPQSVFPNTVFEAVVKIPYDKQIKQVLGNGKKGGINVGAVLILPEGFELAPYNRIP 125

Query: 282 ASCEGYVGHYMLGSHFRRDFKVVI 353
           A  +  +G   L  ++R D + +I
Sbjct: 126 AEMKDKIGDLALFQNYRPDKRNII 149



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>MMPL8_MYCTU (O07800) Putative membrane protein mmpL8|
          Length = 1089

 Score = 30.0 bits (66), Expect = 1.4
 Identities = 13/30 (43%), Positives = 18/30 (60%)
 Frame = +3

Query: 240 GVEAHNVRDWKTVPASCEGYVGHYMLGSHF 329
           G+  +N  D KT+PAS E  +G+  L  HF
Sbjct: 418 GLARYNYDDRKTLPASVESSIGYAALDKHF 447



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>RPOB_CYACA (Q9TM35) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta subunit) (RNA
           polymerase beta subunit)
          Length = 1081

 Score = 29.3 bits (64), Expect = 2.4
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = +3

Query: 165 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN 257
           PLI   RPL+G+G  A +A DS ++ +   N
Sbjct: 552 PLIFPERPLVGTGLEAQIAKDSGIMAISRSN 582



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>RPOB_GRATL (Q6B8R8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)|
           (Plastid-encoded RNA polymerase beta subunit) (RNA
           polymerase beta subunit)
          Length = 1120

 Score = 28.9 bits (63), Expect = 3.1
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%)
 Frame = +3

Query: 165 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN-----VRDWKTVPASCEGYVGHYMLGSHF 329
           PL+   + ++G+G  A +A DS +  +   N     V   K    + EGY  HY L  ++
Sbjct: 591 PLLFPEKSIVGTGLEAKIAKDSGMTIISRTNGTVSYVSGTKIGIQNKEGYTIHYRLKKYY 650

Query: 330 RRDFKVVIDQ 359
           R +    I+Q
Sbjct: 651 RSNQDTCINQ 660



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>THII_PSEPK (Q88CY4) Thiamine biosynthesis protein thiI|
          Length = 484

 Score = 28.5 bits (62), Expect = 4.0
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = +3

Query: 237 LGVEAHNVRDWKTVPASCEGYVGHYMLGSHF 329
           L VE + + D+  + A C+ + GH + G HF
Sbjct: 79  LQVEEYPLGDFDDIVAKCKHHFGHLLAGKHF 109



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>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)|
          Length = 1157

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
 Frame = +2

Query: 278 ARELRGLRRPLHARQPFPPRLQG-RHRPGPRL 370
           A++ R  RR L  R P PP +Q  R  P PRL
Sbjct: 752 AQKRRKRRRMLRERSPSPPTIQSKRQTPSPRL 783



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>AAS_ECO57 (Q8X6J8) AAS bifunctional protein [Includes:|
           2-acylglycerophosphoethanolamine acyltransferase (EC
           2.3.1.40) (Acyl-[acyl-carrier-protein]--phospholipid
           O-acyltransferase) (2-acyl-GPE acyltransferase);
           Acyl-[acyl-carrier-protein] synthetase (EC 6
          Length = 719

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 14/24 (58%), Positives = 15/24 (62%)
 Frame = +3

Query: 186 PLLGSGKHAGVACDSWVLGVEAHN 257
           PLLGSGK   V   SWV  VE H+
Sbjct: 695 PLLGSGKPDFVTLKSWVDEVEQHD 718



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>PLSX_WOLSU (Q7M7Z4) Fatty acid/phospholipid synthesis protein plsX|
          Length = 331

 Score = 28.1 bits (61), Expect = 5.3
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = +3

Query: 231 WVLGVEAHNVRDWKTVPASCEGYVGHYML 317
           +V  VE HN+ D  T    C+G+VG+ +L
Sbjct: 202 FVGNVEGHNIFDGSTEVIVCDGFVGNIVL 230



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>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)|
            (CAIN)
          Length = 2220

 Score = 27.7 bits (60), Expect = 6.9
 Identities = 10/17 (58%), Positives = 13/17 (76%)
 Frame = +2

Query: 341  QGRHRPGPRLCRLPQAR 391
            +G  RPGP++C LP AR
Sbjct: 1669 EGSERPGPKVCGLPGAR 1685



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>BCTN7_SHEEP (P50415) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)|
          Length = 190

 Score = 27.3 bits (59), Expect = 9.0
 Identities = 16/34 (47%), Positives = 21/34 (61%)
 Frame = +2

Query: 284 ELRGLRRPLHARQPFPPRLQGRHRPGPRLCRLPQ 385
           EL+ +RR L  R+P  PR + R RP PR   LP+
Sbjct: 126 ELQSVRR-LRPRRPRLPRPRPRPRPRPRSLPLPR 158


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.314    0.125    0.466 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,969,341
Number of Sequences: 219361
Number of extensions: 686477
Number of successful extensions: 2420
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 2323
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2409
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 1370455656
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
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