| Clone Name | baet79a04 |
|---|---|
| Clone Library Name | barley_pub |
>VSPB_SOYBN (P10743) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein B) Length = 254 Score = 49.7 bits (117), Expect = 2e-06 Identities = 28/65 (43%), Positives = 35/65 (53%), Gaps = 1/65 (1%) Frame = +3 Query: 180 LRPLLGSGKHAG-VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVID 356 LR G G+ + V C S+ L VEAHN+R +KT+P C Y+ G FR D K V Sbjct: 28 LRMKTGYGERSSEVKCASFRLAVEAHNIRAFKTIPEECVEPTKDYINGEQFRSDSKTVNQ 87 Query: 357 QALAY 371 QA Y Sbjct: 88 QAFFY 92
>VSP2_ARATH (O82122) Vegetative storage protein 2 precursor| Length = 265 Score = 49.7 bits (117), Expect = 2e-06 Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = +3 Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDFKVVIDQALAYVDSLKL 389 C SW LGVE N+ D+ TVPA+C+ YV Y++ S ++ D K V +A Y L L Sbjct: 52 CRSWHLGVETSNIIDFDTVPANCKDYVEDYLITSKQYQYDSKTVCKEAYFYAKGLAL 108
>PPA1_LYCES (P27061) Acid phosphatase 1 precursor (EC 3.1.3.2) (Apase-1(1))| Length = 255 Score = 49.3 bits (116), Expect = 2e-06 Identities = 21/56 (37%), Positives = 31/56 (55%) Frame = +3 Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389 C +W VE +N+ WKT+P C YV YM+G ++ + V D+A Y S+ L Sbjct: 43 CTTWRFVVETNNLSPWKTIPEECADYVKEYMVGPGYKMEIDRVSDEAGEYAKSVDL 98
>S25K_SOYBN (P10742) Stem 31 kDa glycoprotein precursor (Vegetative storage| protein VSP25) (Fragment) Length = 291 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +3 Query: 216 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389 V C SW L VEAHN+ ++T+P C Y+ G +R D K V QA Y L++ Sbjct: 37 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV 94
>VSPA_SOYBN (P15490) Stem 28 kDa glycoprotein precursor (Vegetative storage| protein A) Length = 254 Score = 48.5 bits (114), Expect = 4e-06 Identities = 23/58 (39%), Positives = 31/58 (53%) Frame = +3 Query: 216 VACDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGSHFRRDFKVVIDQALAYVDSLKL 389 V C SW L VEAHN+ ++T+P C Y+ G +R D K V QA Y L++ Sbjct: 40 VKCASWRLAVEAHNIFGFETIPEECVEATKEYIHGEQYRSDSKTVNQQAYFYARDLEV 97
>VSP1_ARATH (O49195) Vegetative storage protein 1 precursor| Length = 270 Score = 47.4 bits (111), Expect = 8e-06 Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%) Frame = +3 Query: 222 CDSWVLGVEAHNVRDWKTVPASCEGYVGHYMLGS-HFRRDFKVVIDQALAYVDSLKL 389 C SW LGVE N+ ++ TVPA+C+ YV Y++ S ++ D K V +A Y L L Sbjct: 57 CRSWHLGVETSNIINFDTVPANCKAYVEDYLITSKQYQYDSKTVNKEAYFYAKGLAL 113
>CYF_PSINU (Q8WI07) Apocytochrome f precursor| Length = 321 Score = 32.7 bits (73), Expect = 0.21 Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 3/84 (3%) Frame = +3 Query: 111 VNIRMPTSAAD--VDEAVVA-PLIHALRPLLGSGKHAGVACDSWVLGVEAHNVRDWKTVP 281 V+I +P S V EAVV P ++ +LG+GK G+ + ++ E + + +P Sbjct: 66 VDIEVPQSVFPNTVFEAVVKIPYDKQIKQVLGNGKKGGINVGAVLILPEGFELAPYNRIP 125 Query: 282 ASCEGYVGHYMLGSHFRRDFKVVI 353 A + +G L ++R D + +I Sbjct: 126 AEMKDKIGDLALFQNYRPDKRNII 149
>MMPL8_MYCTU (O07800) Putative membrane protein mmpL8| Length = 1089 Score = 30.0 bits (66), Expect = 1.4 Identities = 13/30 (43%), Positives = 18/30 (60%) Frame = +3 Query: 240 GVEAHNVRDWKTVPASCEGYVGHYMLGSHF 329 G+ +N D KT+PAS E +G+ L HF Sbjct: 418 GLARYNYDDRKTLPASVESSIGYAALDKHF 447
>RPOB_CYACA (Q9TM35) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1081 Score = 29.3 bits (64), Expect = 2.4 Identities = 13/31 (41%), Positives = 19/31 (61%) Frame = +3 Query: 165 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN 257 PLI RPL+G+G A +A DS ++ + N Sbjct: 552 PLIFPERPLVGTGLEAQIAKDSGIMAISRSN 582
>RPOB_GRATL (Q6B8R8) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (PEP)| (Plastid-encoded RNA polymerase beta subunit) (RNA polymerase beta subunit) Length = 1120 Score = 28.9 bits (63), Expect = 3.1 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 5/70 (7%) Frame = +3 Query: 165 PLIHALRPLLGSGKHAGVACDSWVLGVEAHN-----VRDWKTVPASCEGYVGHYMLGSHF 329 PL+ + ++G+G A +A DS + + N V K + EGY HY L ++ Sbjct: 591 PLLFPEKSIVGTGLEAKIAKDSGMTIISRTNGTVSYVSGTKIGIQNKEGYTIHYRLKKYY 650 Query: 330 RRDFKVVIDQ 359 R + I+Q Sbjct: 651 RSNQDTCINQ 660
>THII_PSEPK (Q88CY4) Thiamine biosynthesis protein thiI| Length = 484 Score = 28.5 bits (62), Expect = 4.0 Identities = 11/31 (35%), Positives = 18/31 (58%) Frame = +3 Query: 237 LGVEAHNVRDWKTVPASCEGYVGHYMLGSHF 329 L VE + + D+ + A C+ + GH + G HF Sbjct: 79 LQVEEYPLGDFDDIVAKCKHHFGHLLAGKHF 109
>K0182_HUMAN (Q14687) Protein KIAA0182 (Fragment)| Length = 1157 Score = 28.1 bits (61), Expect = 5.3 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 1/32 (3%) Frame = +2 Query: 278 ARELRGLRRPLHARQPFPPRLQG-RHRPGPRL 370 A++ R RR L R P PP +Q R P PRL Sbjct: 752 AQKRRKRRRMLRERSPSPPTIQSKRQTPSPRL 783
>AAS_ECO57 (Q8X6J8) AAS bifunctional protein [Includes:| 2-acylglycerophosphoethanolamine acyltransferase (EC 2.3.1.40) (Acyl-[acyl-carrier-protein]--phospholipid O-acyltransferase) (2-acyl-GPE acyltransferase); Acyl-[acyl-carrier-protein] synthetase (EC 6 Length = 719 Score = 28.1 bits (61), Expect = 5.3 Identities = 14/24 (58%), Positives = 15/24 (62%) Frame = +3 Query: 186 PLLGSGKHAGVACDSWVLGVEAHN 257 PLLGSGK V SWV VE H+ Sbjct: 695 PLLGSGKPDFVTLKSWVDEVEQHD 718
>PLSX_WOLSU (Q7M7Z4) Fatty acid/phospholipid synthesis protein plsX| Length = 331 Score = 28.1 bits (61), Expect = 5.3 Identities = 12/29 (41%), Positives = 18/29 (62%) Frame = +3 Query: 231 WVLGVEAHNVRDWKTVPASCEGYVGHYML 317 +V VE HN+ D T C+G+VG+ +L Sbjct: 202 FVGNVEGHNIFDGSTEVIVCDGFVGNIVL 230
>CABIN_HUMAN (Q9Y6J0) Calcineurin-binding protein Cabin 1 (Calcineurin inhibitor)| (CAIN) Length = 2220 Score = 27.7 bits (60), Expect = 6.9 Identities = 10/17 (58%), Positives = 13/17 (76%) Frame = +2 Query: 341 QGRHRPGPRLCRLPQAR 391 +G RPGP++C LP AR Sbjct: 1669 EGSERPGPKVCGLPGAR 1685
>BCTN7_SHEEP (P50415) Bactenecin-7 precursor (Bac7) (Cathelicidin-3) (PR-59)| Length = 190 Score = 27.3 bits (59), Expect = 9.0 Identities = 16/34 (47%), Positives = 21/34 (61%) Frame = +2 Query: 284 ELRGLRRPLHARQPFPPRLQGRHRPGPRLCRLPQ 385 EL+ +RR L R+P PR + R RP PR LP+ Sbjct: 126 ELQSVRR-LRPRRPRLPRPRPRPRPRPRSLPLPR 158 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.314 0.125 0.466 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 40,969,341 Number of Sequences: 219361 Number of extensions: 686477 Number of successful extensions: 2420 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 2323 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 2409 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 1370455656 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits)