| Clone Name | baet78h02 |
|---|---|
| Clone Library Name | barley_pub |
>PRG4_HUMAN (Q92954) Proteoglycan-4 precursor (Lubricin) (Megakaryocyte| stimulating factor) (Superficial zone proteoglycan) [Contains: Proteoglycan-4 C-terminal part] Length = 1404 Score = 32.0 bits (71), Expect = 0.42 Identities = 12/28 (42%), Positives = 18/28 (64%) Frame = +1 Query: 193 VQPQPNQLTYHNGAVLHGDIPVSVLWYG 276 +Q P +L Y + VLH ++ VS+LW G Sbjct: 1318 IQYSPARLAYQDKGVLHNEVKVSILWRG 1345
>EFP_MYCPA (Q741J3) Elongation factor P (EF-P)| Length = 187 Score = 30.8 bits (68), Expect = 0.93 Identities = 12/26 (46%), Positives = 20/26 (76%) Frame = +1 Query: 187 FLVQPQPNQLTYHNGAVLHGDIPVSV 264 FL++ P Q+ +HNG+ L+ ++PVSV Sbjct: 104 FLLEGMPVQVAFHNGSPLYIELPVSV 129
>EFP_MYCTU (P64034) Elongation factor P (EF-P)| Length = 187 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +1 Query: 187 FLVQPQPNQLTYHNGAVLHGDIPVSV 264 FL++ P Q+ +HNG L+ ++PV+V Sbjct: 104 FLLEGMPVQVAFHNGVPLYIELPVTV 129
>EFP_MYCBO (P64035) Elongation factor P (EF-P)| Length = 187 Score = 29.3 bits (64), Expect = 2.7 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +1 Query: 187 FLVQPQPNQLTYHNGAVLHGDIPVSV 264 FL++ P Q+ +HNG L+ ++PV+V Sbjct: 104 FLLEGMPVQVAFHNGVPLYIELPVTV 129
>ZBP2_CHICK (Q8UVD9) Zipcode-binding protein 2| Length = 769 Score = 28.5 bits (62), Expect = 4.6 Identities = 16/55 (29%), Positives = 22/55 (40%) Frame = +3 Query: 48 NLFPRSKPLFLPSPNGQEKXXXXXGANGARR*HGIRVGYREHEEAHVPGPAPAEP 212 N +P+ +P P+P+ K N A GY H PGP P +P Sbjct: 608 NTYPQWQP---PAPHDPSKAAAAADPNAAW------AGYYSHYYQQPPGPVPGQP 653
>EFP_COREF (Q8FT34) Elongation factor P (EF-P)| Length = 187 Score = 28.5 bits (62), Expect = 4.6 Identities = 11/26 (42%), Positives = 19/26 (73%) Frame = +1 Query: 187 FLVQPQPNQLTYHNGAVLHGDIPVSV 264 FL++ Q+++H+G L G++PVSV Sbjct: 104 FLLENMRVQVSFHDGEALFGELPVSV 129
>EFP_CORGL (Q45288) Elongation factor P (EF-P)| Length = 187 Score = 28.1 bits (61), Expect = 6.0 Identities = 11/26 (42%), Positives = 18/26 (69%) Frame = +1 Query: 187 FLVQPQPNQLTYHNGAVLHGDIPVSV 264 FL++ Q+++H G L G++PVSV Sbjct: 104 FLLENMRVQVSFHEGEALFGELPVSV 129
>ROUGH_DROME (P10181) Homeobox protein rough| Length = 350 Score = 27.7 bits (60), Expect = 7.9 Identities = 12/29 (41%), Positives = 15/29 (51%) Frame = +1 Query: 1 SHPHKQHHTRHGHVRKTFFQDLNPSSSPP 87 S H+QHH H H + Q L+ S PP Sbjct: 119 SQQHQQHHHHHHHPPQLVHQKLSYVSPPP 147
>IP6K1_RAT (Q9ESM0) Inositol hexaphosphate kinase 1 (EC 2.7.4.21) (InsP6| kinase 1) (Inositol hexakisphosphate kinase 1) Length = 433 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -3 Query: 264 DGDGDVAVQHGAVVVRELVRLGLDQEHELPRARGSRRGCHVSGERH*RQEEE 109 D DG + + V E V E E PR + SRR H SG +EE+ Sbjct: 84 DSDGYINLVAYPYVESETVEQDDTPEREQPRRKHSRRSLHRSGSGSDHKEEK 135
>IP6K1_MOUSE (Q6PD10) Inositol hexaphosphate kinase 1 (EC 2.7.4.21) (InsP6| kinase 1) (Inositol hexakisphosphate kinase 1) Length = 433 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -3 Query: 264 DGDGDVAVQHGAVVVRELVRLGLDQEHELPRARGSRRGCHVSGERH*RQEEE 109 D DG + + V E V E E PR + SRR H SG +EE+ Sbjct: 84 DSDGYINLVAYPYVESETVEQDDTPEREQPRRKHSRRSLHRSGSGSDHKEEK 135
>IP6K1_HUMAN (Q92551) Inositol hexaphosphate kinase 1 (EC 2.7.4.21) (InsP6| kinase 1) (Inositol hexakisphosphate kinase 1) Length = 441 Score = 27.7 bits (60), Expect = 7.9 Identities = 18/52 (34%), Positives = 23/52 (44%) Frame = -3 Query: 264 DGDGDVAVQHGAVVVRELVRLGLDQEHELPRARGSRRGCHVSGERH*RQEEE 109 D DG + + V E V E E PR + SRR H SG +EE+ Sbjct: 84 DSDGYINLVAYPYVESETVEQDDTTEREQPRRKHSRRSLHRSGSGSDHKEEK 135
>COAD_CORGL (Q8NQU5) Phosphopantetheine adenylyltransferase (EC 2.7.7.3)| (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase) Length = 160 Score = 27.7 bits (60), Expect = 7.9 Identities = 13/33 (39%), Positives = 20/33 (60%) Frame = -3 Query: 252 DVAVQHGAVVVRELVRLGLDQEHELPRARGSRR 154 D +HG + + +R LD E+ELP A+ +RR Sbjct: 75 DYTTEHGIGALVKGLRSSLDYEYELPMAQMNRR 107 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 33,727,387 Number of Sequences: 219361 Number of extensions: 495604 Number of successful extensions: 1891 Number of sequences better than 10.0: 12 Number of HSP's better than 10.0 without gapping: 1729 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1866 length of database: 80,573,946 effective HSP length: 69 effective length of database: 65,438,037 effective search space used: 1570512888 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)