ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet78e06 |
|---|---|
| Clone Library Name | barley_pub |
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,| chloroplast precursor (RuBisCO activase A) (RA A) Length = 464 Score = 137 bits (346), Expect = 6e-33 Identities = 67/67 (100%), Positives = 67/67 (100%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 184 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 243 Query: 183 LMNIADA 203 LMNIADA Sbjct: 244 LMNIADA 250
>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 474 Score = 135 bits (339), Expect = 4e-32 Identities = 65/66 (98%), Positives = 66/66 (100%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 194 LESGNAGEPAKLIRQRYREAADLIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 253 Query: 183 LMNIAD 200 LMNIAD Sbjct: 254 LMNIAD 259
>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) (RubisCO activase alpha form) Length = 476 Score = 134 bits (338), Expect = 5e-32 Identities = 65/66 (98%), Positives = 66/66 (100%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 194 LESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 253 Query: 183 LMNIAD 200 LMNIAD Sbjct: 254 LMNIAD 259
>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) (RubisCO activase beta form) Length = 435 Score = 134 bits (338), Expect = 5e-32 Identities = 65/66 (98%), Positives = 66/66 (100%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 194 LESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 253 Query: 183 LMNIAD 200 LMNIAD Sbjct: 254 LMNIAD 259
>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 413 Score = 133 bits (335), Expect = 1e-31 Identities = 64/66 (96%), Positives = 66/66 (100%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGR+GGTTQYTVNNQMVNAT Sbjct: 191 LESGNAGEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRLGGTTQYTVNNQMVNAT 250 Query: 183 LMNIAD 200 LMNIAD Sbjct: 251 LMNIAD 256
>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 433 Score = 130 bits (326), Expect = 1e-30 Identities = 63/66 (95%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREA+D+IKKGKM CLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 190 LESGNAGEPAKLIRQRYREASDLIKKGKMSCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 249 Query: 183 LMNIAD 200 LMNIAD Sbjct: 250 LMNIAD 255
>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,| chloroplast precursor (RuBisCO activase 1) (RA 1) Length = 442 Score = 130 bits (326), Expect = 1e-30 Identities = 62/66 (93%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 198 LESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 257 Query: 183 LMNIAD 200 LMNIAD Sbjct: 258 LMNIAD 263
>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 459 Score = 130 bits (326), Expect = 1e-30 Identities = 62/66 (93%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAA++I+KG MCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 193 LESGNAGEPAKLIRQRYREAAEIIRKGNMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 252 Query: 183 LMNIAD 200 LMNIAD Sbjct: 253 LMNIAD 258
>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 441 Score = 129 bits (323), Expect = 3e-30 Identities = 62/66 (93%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREA+D+IKKGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNAT Sbjct: 198 LESGNAGEPAKLIRQRYREASDLIKKGKMCVLFINDLDAGAGRLGGTTQYTVNNQMVNAT 257 Query: 183 LMNIAD 200 LMNIAD Sbjct: 258 LMNIAD 263
>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 437 Score = 129 bits (323), Expect = 3e-30 Identities = 62/66 (93%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+I+KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNAT Sbjct: 194 LESGNAGEPAKLIRQRYREAADIIRKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNAT 253 Query: 183 LMNIAD 200 LMNIAD Sbjct: 254 LMNIAD 259
>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 432 Score = 128 bits (322), Expect = 4e-30 Identities = 64/66 (96%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGN GEPAKLIRQRYREAAD+IKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 185 LESGN-GEPAKLIRQRYREAADIIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 243 Query: 183 LMNIAD 200 LMNIAD Sbjct: 244 LMNIAD 249
>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,| chloroplast precursor (RuBisCO activase 2) (RA 2) Length = 439 Score = 128 bits (322), Expect = 4e-30 Identities = 61/66 (92%), Positives = 65/66 (98%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAA++I+KG +CCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 198 LESGNAGEPAKLIRQRYREAAEIIRKGNICCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 257 Query: 183 LMNIAD 200 LMNIAD Sbjct: 258 LMNIAD 263
>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,| chloroplast precursor (RuBisCO activase B) (RA B) Length = 425 Score = 128 bits (321), Expect = 5e-30 Identities = 64/67 (95%), Positives = 65/67 (97%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGN GEPAKLIRQRYREAAD+I KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT Sbjct: 182 LESGN-GEPAKLIRQRYREAADIINKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 240 Query: 183 LMNIADA 203 LMNIADA Sbjct: 241 LMNIADA 247
>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 439 Score = 128 bits (321), Expect = 5e-30 Identities = 62/66 (93%), Positives = 64/66 (96%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDLDAGAGR+GGTTQYTVNNQMVNAT Sbjct: 196 LESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLDAGAGRLGGTTQYTVNNQMVNAT 255 Query: 183 LMNIAD 200 LMNIAD Sbjct: 256 LMNIAD 261
>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 472 Score = 125 bits (315), Expect = 2e-29 Identities = 61/66 (92%), Positives = 63/66 (95%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIRQRYREAAD+I KGKMC LFINDL+ GAGRMGGTTQYTVNNQMVNAT Sbjct: 192 LESGNAGEPAKLIRQRYREAADLIAKGKMCALFINDLEPGAGRMGGTTQYTVNNQMVNAT 251 Query: 183 LMNIAD 200 LMNIAD Sbjct: 252 LMNIAD 257
>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,| chloroplast precursor (RuBisCO activase) (RA) Length = 408 Score = 123 bits (309), Expect = 1e-28 Identities = 60/66 (90%), Positives = 63/66 (95%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNAT 182 LESGNAGEPAKLIR RYREA+D+IKKG+MC LFINDLDAGAGRMG TTQYTVNNQMVNAT Sbjct: 167 LESGNAGEPAKLIRTRYREASDIIKKGRMCSLFINDLDAGAGRMGDTTQYTVNNQMVNAT 226 Query: 183 LMNIAD 200 LMNIAD Sbjct: 227 LMNIAD 232
>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 415 Score = 96.3 bits (238), Expect = 2e-20 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA 179 LES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+VNA Sbjct: 66 LESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNA 125 Query: 180 TLMNIAD 200 TLMNIAD Sbjct: 126 TLMNIAD 132
>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase| (RuBisCO activase) (RA) Length = 414 Score = 96.3 bits (238), Expect = 2e-20 Identities = 49/67 (73%), Positives = 56/67 (83%), Gaps = 1/67 (1%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIK-KGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNA 179 LES +AG+PA+LIR RYRE A++IK +GKMC L INDLDAGAGR TQYTVN Q+VNA Sbjct: 66 LESPDAGDPARLIRLRYRETAELIKVRGKMCVLMINDLDAGAGRFDEGTQYTVNTQLVNA 125 Query: 180 TLMNIAD 200 TLMNIAD Sbjct: 126 TLMNIAD 132
>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)| Length = 372 Score = 31.2 bits (69), Expect = 0.78 Identities = 16/47 (34%), Positives = 23/47 (48%) Frame = +3 Query: 15 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYT 155 + G A+L+ Q R+ IKK C+FIN + G M G + T Sbjct: 162 HVGLQARLMSQALRKLTSNIKKSNTMCIFINQIRMKIGVMFGNPETT 208
>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory| subunit) Length = 407 Score = 30.8 bits (68), Expect = 1.0 Identities = 20/58 (34%), Positives = 32/58 (55%) Frame = +3 Query: 21 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMNI 194 GE AKL+R ++ A K+ C +FI+++DA A + T T ++ V TLM + Sbjct: 224 GEGAKLVRDVFKLA----KEKSPCIIFIDEIDAVASKR--TESLTGGDREVQRTLMQL 275
>RECA_CHLTE (O52393) Protein recA (Recombinase A)| Length = 346 Score = 30.8 bits (68), Expect = 1.0 Identities = 17/49 (34%), Positives = 23/49 (46%) Frame = +3 Query: 21 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 167 G A+L+ Q R+ I K CLFIN L G M G+ + T + Sbjct: 178 GLQARLMSQALRKLTGAISKSSSVCLFINQLRDKIGVMYGSPETTTGGK 226
>FILA_HUMAN (P20930) Filaggrin| Length = 4061 Score = 29.3 bits (64), Expect = 2.9 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Frame = +2 Query: 116 RWCG*DGRNH--AVHRQQPDGERHPDEH 193 RW G RNH + Q DG RHP H Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSH 3581 Score = 28.9 bits (63), Expect = 3.9 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Frame = +2 Query: 116 RWCG*DGRNH--AVHRQQPDGERHPDEH 193 RW G RNH + Q DG RHP H Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSH 663 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Frame = +2 Query: 116 RWCG*DGRNH--AVHRQQPDGERHPDEHR 196 RW G RNH + Q DG RHP H+ Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQ 2934 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/29 (44%), Positives = 15/29 (51%), Gaps = 2/29 (6%) Frame = +2 Query: 116 RWCG*DGRNH--AVHRQQPDGERHPDEHR 196 RW G RNH + Q DG RHP H+ Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQ 2610 Score = 28.5 bits (62), Expect = 5.0 Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%) Frame = +2 Query: 116 RWCG*DGRNH--AVHRQQPDGERHPDEH 193 RW G RNH + Q DG RHP H Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSH 1960
>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)| Length = 663 Score = 29.3 bits (64), Expect = 2.9 Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGGTTQY--TVNNQMV 173 R R+ M +K C LFI+++DA G G +GG ++ T+N +V Sbjct: 254 RVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGGQSEQENTLNQMLV 302
>RECA_MYCGE (P47581) Protein recA (Recombinase A)| Length = 340 Score = 28.9 bits (63), Expect = 3.9 Identities = 15/55 (27%), Positives = 24/55 (43%) Frame = +3 Query: 3 LESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQ 167 +E G A+++ + R ++ K C LFIN L G M G + T + Sbjct: 160 IEEQTIGLHARMMSKGLRRIQSILPDSKTCVLFINQLREKPGVMFGNNEVTTGGK 214
>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)| Length = 635 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 231 RVRDMFEQAKKNAPCLIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 279
>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) Length = 715 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 21 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 185 G A IR +REA K C +FI++LD+ G+ + + + Q +N L Sbjct: 356 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLL 406
>FLAEY_CAUCR (P15345) Regulatory protein flaEY| Length = 954 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/46 (36%), Positives = 22/46 (47%) Frame = +3 Query: 39 IRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVN 176 +R YRE AD K ND G+G+ GGT + NQ+ N Sbjct: 904 VRTAYREIADTALGIK------NDGTTGSGKTGGTVPAYLKNQVAN 943
>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 232 RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 232 RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 232 RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)| Length = 644 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 232 RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)| Length = 644 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 7/49 (14%) Frame = +3 Query: 48 RYREAADMIKKGKMCCLFINDLDA-----GAGRMGG--TTQYTVNNQMV 173 R R+ + KK C +FI+++DA GAG GG + T+N +V Sbjct: 232 RVRDMFEQAKKAAPCIIFIDEIDAVGRQRGAGLGGGHDEREQTLNQMLV 280
>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)| (YME1-like protein 1) (ATP-dependent metalloprotease FtsH1) (Meg-4) (Presenilin-associated metalloprotease) (PAMP) Length = 773 Score = 28.5 bits (62), Expect = 5.0 Identities = 17/55 (30%), Positives = 27/55 (49%) Frame = +3 Query: 21 GEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATL 185 G A IR +REA K C +FI++LD+ G+ + + + Q +N L Sbjct: 414 GVGASRIRNLFREA----KANAPCVIFIDELDSVGGKRIESPMHPYSRQTINQLL 464
>CLPX_BIFLO (Q8G5R1) ATP-dependent Clp protease ATP-binding subunit clpX| Length = 472 Score = 28.5 bits (62), Expect = 5.0 Identities = 18/68 (26%), Positives = 36/68 (52%), Gaps = 3/68 (4%) Frame = +3 Query: 6 ESGNAGEPAKLIRQRYREAAD-MIKKGKMCCLFINDLDAGAGRMGGTTQYT--VNNQMVN 176 E+G G+ + + QR +AAD + + + ++I+++D A + G T T V+ + V Sbjct: 185 EAGYVGDDVETVLQRLLQAADGDVSRAQHGIIYIDEIDKIARKSGENTSITRDVSGEGVQ 244 Query: 177 ATLMNIAD 200 L+ I + Sbjct: 245 QALLKILE 252
>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)| Length = 603 Score = 27.7 bits (60), Expect = 8.6 Identities = 16/59 (27%), Positives = 28/59 (47%) Frame = +3 Query: 15 NAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAGRMGGTTQYTVNNQMVNATLMN 191 +AGE K++R+ + EA+ K +FI+++D R + V TLM+ Sbjct: 96 HAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPRRDARREQDVRIASQLFTLMD 154
>P2RY2_BOVIN (O18951) P2Y purinoceptor 2 (P2Y2) (Fragment)| Length = 133 Score = 27.7 bits (60), Expect = 8.6 Identities = 9/16 (56%), Positives = 12/16 (75%) Frame = -2 Query: 184 RVAFTIWLLTVYCVVP 137 RVAF +W+L +YC P Sbjct: 26 RVAFAVWVLVLYCQAP 41 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 30,188,512 Number of Sequences: 219361 Number of extensions: 511722 Number of successful extensions: 1528 Number of sequences better than 10.0: 36 Number of HSP's better than 10.0 without gapping: 1507 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1526 length of database: 80,573,946 effective HSP length: 43 effective length of database: 71,141,423 effective search space used: 1707394152 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
