ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet78e01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_194863.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.11), mRNA Length = 591 Score = 99.6 bits (50), Expect = 4e-18 Identities = 92/106 (86%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| |||| ||||||| |||||||||| || ||||||||||||| ||||| Sbjct: 64 gaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatg 123 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || ||| ||| ||||||||| ||||||| |||||||||||||||| Sbjct: 124 aaggccaaggccgccttcaagggtctccgtgtggcgatcaagtgca 169
>ref|NM_194867.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.15), mRNA Length = 690 Score = 93.7 bits (47), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 72 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 131 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||||||||||| Sbjct: 132 gaaagctgaggatgctttcaagaacctccaggtggcgatcaagtgca 178
>dbj|AK062795.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-107-C07, full insert sequence Length = 862 Score = 93.7 bits (47), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 115 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 174 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||||||||||| Sbjct: 175 gaaagctgaggatgctttcaagaacctccaggtggcgatcaagtgca 221
>dbj|AK061299.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-E05, full insert sequence Length = 928 Score = 93.7 bits (47), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 129 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 188 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||||||||||| Sbjct: 189 gaaagctgaggatgctttcaagaacctccaggtggcgatcaagtgca 235
>dbj|AB055842.1| Oryza sativa OsPRP1 mRNA for proline-rich protein, complete cds Length = 980 Score = 93.7 bits (47), Expect = 2e-16 Identities = 92/107 (85%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 129 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 188 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||||||||||| Sbjct: 189 gaaagctgaggatgctttcaagaacctccaggtggcgatcaagtgca 235
>ref|NM_194857.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.5), mRNA Length = 675 Score = 91.7 bits (46), Expect = 9e-16 Identities = 91/106 (85%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 85 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 144 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || |||| || |||||| |||||| ||||||||||||||||| Sbjct: 145 aaggcgcaggatgctttcaagggtctccaggtggcgatcaagtgca 190
>ref|NM_194855.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.13), mRNA Length = 660 Score = 91.7 bits (46), Expect = 9e-16 Identities = 91/106 (85%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 70 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 129 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || |||| || |||||| |||||| ||||||||||||||||| Sbjct: 130 aaggcgcaggatgctttcaagggtctccaggtggcgatcaagtgca 175
>ref|NM_194865.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.13), mRNA Length = 690 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 99 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 158 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 159 ccaggtggcgatcaagtgca 178
>dbj|AK104542.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-B03, full insert sequence Length = 1008 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 144 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 203 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 204 ccaggtggcgatcaagtgca 223
>dbj|AK104257.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-F02, full insert sequence Length = 1010 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 207 ccaggtggcgatcaagtgca 226
>dbj|AK072923.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023146D17, full insert sequence Length = 1015 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 151 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 210 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 211 ccaggtggcgatcaagtgca 230
>dbj|AK061576.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-G10, full insert sequence Length = 1011 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 207 ccaggtggcgatcaagtgca 226
>dbj|AK058887.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-007-C09, full insert sequence Length = 1011 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 147 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 206 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 207 ccaggtggcgatcaagtgca 226
>dbj|AB071178.1| Oryza sativa (japonica cultivar-group) OsPRP2 mRNA for proline-rich protein 2, complete cds Length = 828 Score = 87.7 bits (44), Expect = 1e-14 Identities = 71/80 (88%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| ||| Sbjct: 99 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaagaatct 158 Query: 208 ccgggtggcgatcaagtgca 227 || ||||||||||||||||| Sbjct: 159 ccaggtggcgatcaagtgca 178
>ref|NM_194861.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.9), mRNA Length = 636 Score = 77.8 bits (39), Expect = 1e-11 Identities = 81/95 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggagg 194 |||| |||||| ||||||||||| |||||| |||||||| ||||||| || |||| | Sbjct: 104 tcgtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaaggcgcaggatg 163 Query: 195 ccttcaagcgtctccgggtggcgatcaagtgcagg 229 | |||||| |||||| ||||||||||||||||||| Sbjct: 164 ctttcaagggtctccaggtggcgatcaagtgcagg 198
>gb|AC084884.2| Oryza sativa chromosome 10 clone OSJNBa0031A07, complete sequence Length = 134553 Score = 75.8 bits (38), Expect = 5e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 99178 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 99237 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 99238 gaaagctgaggatgctttcaag 99259 Score = 65.9 bits (33), Expect = 5e-08 Identities = 69/81 (85%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| |||| ||||||| |||||||||| || ||||||||||||| ||||| Sbjct: 68553 gaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatg 68494 Query: 182 aacgccgaggaggccttcaag 202 || ||| ||| ||||||||| Sbjct: 68493 aaggccaaggccgccttcaag 68473 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaag 202 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| Sbjct: 84466 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaag 84520 Score = 60.0 bits (30), Expect = 3e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 81246 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 81187 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 81186 gaaagctgaggatgctttcaag 81165 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 27303 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 27244 Query: 182 aa 183 || Sbjct: 27243 aa 27242 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 10293 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 10234 Query: 182 aa 183 || Sbjct: 10233 aa 10232 Score = 58.0 bits (29), Expect = 1e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 88269 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 88328 Query: 182 aacgccgaggaggccttcaag 202 || || ||||| || |||||| Sbjct: 88329 aaagctgaggatgctttcaag 88349 Score = 48.1 bits (24), Expect = 0.012 Identities = 42/48 (87%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatga 182 |||| ||||| ||||||||||||| || |||||||||||| |||||| Sbjct: 35031 tcgtcgtcggtcaggccaagtgcggcgagtgcaccaggaagaacatga 34984 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 58662 gtctccaggtggcgatcaagtgcagg 58687 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||| |||||| ||||||||||| ||||||| |||||||| |||| Sbjct: 49899 tcgtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 49854 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 18196 gtctccaggtggcgatcaagtgcagg 18171 Score = 42.1 bits (21), Expect = 0.77 Identities = 42/49 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||| |||||| ||||||||||| |||||| |||||||| ||||||| Sbjct: 58490 tcgtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 58538 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 67497 gtctccgtgtggcgatcaagtgca 67474 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 49734 gtctccaggtggcgatcaagtgca 49711 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 34859 gtctccaggtggcgatcaagtgca 34836 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 27119 gtctccaggtggcgatcaagtgca 27096 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 10109 gtctccaggtggcgatcaagtgca 10086
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 75.8 bits (38), Expect = 5e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 3010756 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 3010815 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 3010816 gaaagctgaggatgctttcaag 3010837 Score = 65.9 bits (33), Expect = 5e-08 Identities = 69/81 (85%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| |||| ||||||| |||||||||| || ||||||||||||| ||||| Sbjct: 2980131 gaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatg 2980072 Query: 182 aacgccgaggaggccttcaag 202 || ||| ||| ||||||||| Sbjct: 2980071 aaggccaaggccgccttcaag 2980051 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaag 202 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| Sbjct: 2996044 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaag 2996098 Score = 60.0 bits (30), Expect = 3e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 2992824 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 2992765 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 2992764 gaaagctgaggatgctttcaag 2992743 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 2938881 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 2938822 Query: 182 aa 183 || Sbjct: 2938821 aa 2938820 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 2921841 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 2921782 Query: 182 aa 183 || Sbjct: 2921781 aa 2921780 Score = 58.0 bits (29), Expect = 1e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 2999847 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 2999906 Query: 182 aacgccgaggaggccttcaag 202 || || ||||| || |||||| Sbjct: 2999907 aaagctgaggatgctttcaag 2999927 Score = 58.0 bits (29), Expect = 1e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 126 cggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacg 185 ||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 2902552 cggcgtcggtcgtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacg 2902493 Query: 186 ccgag 190 ||||| Sbjct: 2902492 ccgag 2902488 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||||||||||||| ||||||||||||| ||||||| Sbjct: 2877893 ggccaagtgcgccgactgcaccaggaagaacatgaa 2877858 Score = 48.1 bits (24), Expect = 0.012 Identities = 42/48 (87%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatga 182 |||| ||||| ||||||||||||| || |||||||||||| |||||| Sbjct: 2946609 tcgtcgtcggtcaggccaagtgcggcgagtgcaccaggaagaacatga 2946562 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 2970240 gtctccaggtggcgatcaagtgcagg 2970265 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||| |||||| ||||||||||| ||||||| |||||||| |||| Sbjct: 2961477 tcgtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 2961432 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 2929774 gtctccaggtggcgatcaagtgcagg 2929749 Score = 42.1 bits (21), Expect = 0.77 Identities = 42/49 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||| |||||| ||||||||||| |||||| |||||||| ||||||| Sbjct: 2970068 tcgtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 2970116 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 2979075 gtctccgtgtggcgatcaagtgca 2979052 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2961312 gtctccaggtggcgatcaagtgca 2961289 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2946437 gtctccaggtggcgatcaagtgca 2946414 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2938697 gtctccaggtggcgatcaagtgca 2938674 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2921657 gtctccaggtggcgatcaagtgca 2921634
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 75.8 bits (38), Expect = 5e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| |||| |||||| |||||||||||||| ||||||||||||| |||| Sbjct: 3010677 agaggcggcgtcggtcgtcgtcggcacggccaagtgcgccgactgcaccaggaagaacat 3010736 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 3010737 gaaagctgaggatgctttcaag 3010758 Score = 65.9 bits (33), Expect = 5e-08 Identities = 69/81 (85%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| |||| ||||||| |||||||||| || ||||||||||||| ||||| Sbjct: 2980052 gaggcggcgtcggtcgtcgtcggcctcgccaagtgcggcgactgcaccaggaagaacatg 2979993 Query: 182 aacgccgaggaggccttcaag 202 || ||| ||| ||||||||| Sbjct: 2979992 aaggccaaggccgccttcaag 2979972 Score = 61.9 bits (31), Expect = 8e-07 Identities = 49/55 (89%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaag 202 |||||||||||||| ||||||| ||||| ||||||| |||||||| || |||||| Sbjct: 2995965 ggccaagtgcgccgactgcacccggaagaacatgaaagccgaggatgctttcaag 2996019 Score = 60.0 bits (30), Expect = 3e-06 Identities = 69/82 (84%) Strand = Plus / Minus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 2992745 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 2992686 Query: 181 gaacgccgaggaggccttcaag 202 ||| || ||||| || |||||| Sbjct: 2992685 gaaagctgaggatgctttcaag 2992664 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 2938802 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 2938743 Query: 182 aa 183 || Sbjct: 2938742 aa 2938741 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 2921792 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 2921733 Query: 182 aa 183 || Sbjct: 2921732 aa 2921731 Score = 58.0 bits (29), Expect = 1e-05 Identities = 68/81 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 2999768 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 2999827 Query: 182 aacgccgaggaggccttcaag 202 || || ||||| || |||||| Sbjct: 2999828 aaagctgaggatgctttcaag 2999848 Score = 58.0 bits (29), Expect = 1e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 126 cggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacg 185 ||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 2902503 cggcgtcggtcgtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacg 2902444 Query: 186 ccgag 190 ||||| Sbjct: 2902443 ccgag 2902439 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||||||||||||| ||||||||||||| ||||||| Sbjct: 2877844 ggccaagtgcgccgactgcaccaggaagaacatgaa 2877809 Score = 48.1 bits (24), Expect = 0.012 Identities = 42/48 (87%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatga 182 |||| ||||| ||||||||||||| || |||||||||||| |||||| Sbjct: 2946530 tcgtcgtcggtcaggccaagtgcggcgagtgcaccaggaagaacatga 2946483 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 2970161 gtctccaggtggcgatcaagtgcagg 2970186 Score = 44.1 bits (22), Expect = 0.19 Identities = 40/46 (86%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||| |||||| ||||||||||| ||||||| |||||||| |||| Sbjct: 2961398 tcgtcgtcggcttggccaagtgcggcggctgctccaggaagaacat 2961353 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 2929695 gtctccaggtggcgatcaagtgcagg 2929670 Score = 42.1 bits (21), Expect = 0.77 Identities = 42/49 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||| |||||| ||||||||||| |||||| |||||||| ||||||| Sbjct: 2969989 tcgtcgtcggcttggccaagtgcggtggctgctccaggaagaacatgaa 2970037 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 2978996 gtctccgtgtggcgatcaagtgca 2978973 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2961233 gtctccaggtggcgatcaagtgca 2961210 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2946358 gtctccaggtggcgatcaagtgca 2946335 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2938618 gtctccaggtggcgatcaagtgca 2938595 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 2921608 gtctccaggtggcgatcaagtgca 2921585
>ref|NM_194860.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.8), mRNA Length = 621 Score = 73.8 bits (37), Expect = 2e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggagg 194 |||| |||||| ||||||||||| ||||||| |||||||| |||| || || |||| | Sbjct: 104 tcgtcgtcggcttggccaagtgcggcggctgctccaggaagaacatcaaggcgcaggatg 163 Query: 195 ccttcaagcgtctccgggtggcgatcaagtgca 227 | |||||| |||||| ||||||||||||||||| Sbjct: 164 ctttcaagggtctccaggtggcgatcaagtgca 196
>ref|NM_194858.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.6), mRNA Length = 699 Score = 73.8 bits (37), Expect = 2e-10 Identities = 79/93 (84%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggagg 194 |||| ||||| ||||||||||||| || |||||||||||| |||||| || |||| | Sbjct: 122 tcgtcgtcggtcaggccaagtgcggcgagtgcaccaggaagaacatgatggcgcaggatg 181 Query: 195 ccttcaagcgtctccgggtggcgatcaagtgca 227 | |||||| |||||| ||||||||||||||||| Sbjct: 182 ctttcaagggtctccaggtggcgatcaagtgca 214
>emb|AJ012301.1|ZMA012301 Zea mays mRNA for proline-rich protein Length = 1648 Score = 71.9 bits (36), Expect = 9e-10 Identities = 75/88 (85%) Strand = Plus / Plus Query: 140 gtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttc 199 ||||||| ||||| ||||||| ||||||||||||| || |||| ||||||| ||| ||| Sbjct: 114 gtcggcctcgccaaatgcgccgactgcaccaggaagaacttgaaggccgaggcggcattc 173 Query: 200 aagcgtctccgggtggcgatcaagtgca 227 ||| |||| ||||||||||||||||| Sbjct: 174 aagggtcttgaggtggcgatcaagtgca 201
>gb|AY109604.1| Zea mays CL1298_1 mRNA sequence Length = 1739 Score = 71.9 bits (36), Expect = 9e-10 Identities = 75/88 (85%) Strand = Plus / Plus Query: 140 gtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttc 199 ||||||| ||||| ||||||| ||||||||||||| || |||| ||||||| ||| ||| Sbjct: 114 gtcggcctcgccaaatgcgccgactgcaccaggaagaacttgaaggccgaggcggcattc 173 Query: 200 aagcgtctccgggtggcgatcaagtgca 227 ||| |||| ||||||||||||||||| Sbjct: 174 aagggtcttgaggtggcgatcaagtgca 201
>ref|NM_194864.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.12), mRNA Length = 675 Score = 69.9 bits (35), Expect = 3e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 72 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 131 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||| ||||||| Sbjct: 132 gaaagctgaggatgctttcaagaacctccaggtggcgattaagtgca 178
>dbj|AK104236.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-G04, full insert sequence Length = 963 Score = 69.9 bits (35), Expect = 3e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 135 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 194 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||| ||||||| Sbjct: 195 gaaagctgaggatgctttcaagaacctccaggtggcgattaagtgca 241
>dbj|AK061529.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-E01, full insert sequence Length = 976 Score = 69.9 bits (35), Expect = 3e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 135 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 194 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||| ||||||| Sbjct: 195 gaaagctgaggatgctttcaagaacctccaggtggcgattaagtgca 241
>dbj|AK059999.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-G07, full insert sequence Length = 963 Score = 69.9 bits (35), Expect = 3e-09 Identities = 89/107 (83%) Strand = Plus / Plus Query: 121 agaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacat 180 |||||||||||| | || |||||| |||||||||||||| ||||||| ||||| |||| Sbjct: 135 agaggcggcgtcggtggtcgtcggcacggccaagtgcgccgactgcacccggaagaacat 194 Query: 181 gaacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||| || ||||| || |||||| |||| ||||||||| ||||||| Sbjct: 195 gaaagctgaggatgctttcaagaacctccaggtggcgattaagtgca 241
>ref|NM_194866.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBa0031A07.14), mRNA Length = 690 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 73 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 132 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 133 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 178
>dbj|AK104765.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-H08, full insert sequence Length = 1080 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>dbj|AK104622.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-309-H10, full insert sequence Length = 1032 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>dbj|AK104398.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-202-D05, full insert sequence Length = 1032 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>dbj|AK104262.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-C07, full insert sequence Length = 1030 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>dbj|AK104235.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-307-F12, full insert sequence Length = 972 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 136 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 195 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 196 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 241
>dbj|AK067147.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013098B06, full insert sequence Length = 1032 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 135 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 194 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 195 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 240
>dbj|AK061567.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F04, full insert sequence Length = 1080 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>dbj|AK059996.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-301-F05, full insert sequence Length = 989 Score = 67.9 bits (34), Expect = 1e-08 Identities = 88/106 (83%) Strand = Plus / Plus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||||| | || |||||| |||||||||||||| ||||||| ||||| ||||| Sbjct: 133 gaggcggcgtcggttgtcgtcggcacggccaagtgcgccgactgcacccggaagaacatg 192 Query: 182 aacgccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 || || ||||| || |||||| |||| |||||||||||||||| Sbjct: 193 aaagctgaggatgctttcaagaacctccaagtggcgatcaagtgca 238
>ref|NM_194849.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.7), mRNA Length = 816 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||||||||| ||||||| || |||| | |||||| || | Sbjct: 120 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtgt 179 Query: 208 ccgggtggcgatcaagtgca 227 || |||||||||||||||| Sbjct: 180 tcgcgtggcgatcaagtgca 199
>dbj|AK099480.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013025G01, full insert sequence Length = 1083 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||||||||| ||||||| || |||| | |||||| || | Sbjct: 177 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtgt 236 Query: 208 ccgggtggcgatcaagtgca 227 || |||||||||||||||| Sbjct: 237 tcgcgtggcgatcaagtgca 256
>dbj|AK059665.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-031-E08, full insert sequence Length = 1069 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||||||||| ||||||| || |||| | |||||| || | Sbjct: 162 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtgt 221 Query: 208 ccgggtggcgatcaagtgca 227 || |||||||||||||||| Sbjct: 222 tcgcgtggcgatcaagtgca 241
>gb|DQ317534.1| Oryza sativa (japonica cultivar-group) proline-rich protein mRNA, complete cds Length = 1061 Score = 63.9 bits (32), Expect = 2e-07 Identities = 68/80 (85%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 |||||||||||||| ||||||||||||| ||||||| || |||| | |||||| || | Sbjct: 171 ggccaagtgcgccgactgcaccaggaagaacatgaaagctgaggccgttttcaagggtgt 230 Query: 208 ccgggtggcgatcaagtgca 227 || |||||||||||||||| Sbjct: 231 tcgcgtggcgatcaagtgca 250
>ref|NM_194856.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.14), mRNA Length = 627 Score = 60.0 bits (30), Expect = 3e-06 Identities = 69/82 (84%) Strand = Plus / Plus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtct 207 ||||||||||| || |||| |||| ||| ||||||| | |||| || |||||| |||| Sbjct: 111 ggccaagtgcggcgactgctccagcaagaacatgaaggggcaggatgctttcaagggtct 170 Query: 208 ccgggtggcgatcaagtgcagg 229 || ||||||||||||||||||| Sbjct: 171 ccaggtggcgatcaagtgcagg 192
>ref|NM_194852.1| Oryza sativa (japonica cultivar-group) putative proline-rich protein (OSJNBb0016M10.10), mRNA Length = 906 Score = 60.0 bits (30), Expect = 3e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 126 cggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacg 185 ||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 83 cggcgtcggtcgtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacg 142 Query: 186 ccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||||| || |||||| | || ||||||||||||||||| Sbjct: 143 ccgagaccgctttcaagggacttaaggtggcgatcaagtgca 184
>gb|AC091665.3| Oryza sativa chromosome 10 clone OSJNBb0016M10, complete sequence Length = 118101 Score = 60.0 bits (30), Expect = 3e-06 Identities = 54/62 (87%) Strand = Plus / Minus Query: 122 gaggcggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatg 181 ||||||||| | |||| ||||||||||||||||||| || |||||||||||| ||||| Sbjct: 102873 gaggcggcggcgatcgtcgtcggccaggccaagtgcggcgagtgcaccaggaagaacatg 102814 Query: 182 aa 183 || Sbjct: 102813 aa 102812 Score = 58.0 bits (29), Expect = 1e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 126 cggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacg 185 ||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 83584 cggcgtcggtcgtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacg 83525 Query: 186 ccgag 190 ||||| Sbjct: 83524 ccgag 83520 Score = 56.0 bits (28), Expect = 5e-05 Identities = 34/36 (94%) Strand = Plus / Minus Query: 148 ggccaagtgcgccggctgcaccaggaaggacatgaa 183 |||||||||||||| ||||||||||||| ||||||| Sbjct: 58925 ggccaagtgcgccgactgcaccaggaagaacatgaa 58890 Score = 44.1 bits (22), Expect = 0.19 Identities = 25/26 (96%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgcagg 229 |||||| ||||||||||||||||||| Sbjct: 110806 gtctccaggtggcgatcaagtgcagg 110781 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Minus Query: 204 gtctccgggtggcgatcaagtgca 227 |||||| ||||||||||||||||| Sbjct: 102689 gtctccaggtggcgatcaagtgca 102666
>dbj|AK071590.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023100N02, full insert sequence Length = 1219 Score = 60.0 bits (30), Expect = 3e-06 Identities = 84/102 (82%) Strand = Plus / Plus Query: 126 cggcgtccttcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacg 185 ||||||| |||| |||||| ||||||||||||||||||| ||||||| ||||| ||| Sbjct: 137 cggcgtcggtcgtcgtcggcgcggccaagtgcgccggctgcggcaggaagaacatggacg 196 Query: 186 ccgaggaggccttcaagcgtctccgggtggcgatcaagtgca 227 ||||| || |||||| | || ||||||||||||||||| Sbjct: 197 ccgagaccgctttcaagggacttaaggtggcgatcaagtgca 238
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgagg 191 ||||||||||| ||||| |||| | || |||||||||||| ||||||| ||||||| Sbjct: 7646573 tcgtggtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgagg 7646517
>gb|AC129008.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0096L14, from chromosome 3, complete sequence Length = 131142 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgagg 191 ||||||||||| ||||| |||| | || |||||||||||| ||||||| ||||||| Sbjct: 68717 tcgtggtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgagg 68773
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Minus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgagg 191 ||||||||||| ||||| |||| | || |||||||||||| ||||||| ||||||| Sbjct: 7644408 tcgtggtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgagg 7644352
>dbj|AK062288.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-100-E04, full insert sequence Length = 981 Score = 50.1 bits (25), Expect = 0.003 Identities = 49/57 (85%) Strand = Plus / Plus Query: 135 tcgtggtcggccaggccaagtgcgccggctgcaccaggaaggacatgaacgccgagg 191 ||||||||||| ||||| |||| | || |||||||||||| ||||||| ||||||| Sbjct: 136 tcgtggtcggcttggccatgtgctcgggttgcaccaggaagaacatgaatgccgagg 192
>gb|AY105214.1| Zea mays PCO090639 mRNA sequence Length = 919 Score = 44.1 bits (22), Expect = 0.19 Identities = 61/74 (82%) Strand = Plus / Plus Query: 154 gtgcgccggctgcaccaggaaggacatgaacgccgaggaggccttcaagcgtctccgggt 213 |||||||| | |||| |||||| ||||||| || |||| | |||||| |||| | ||| Sbjct: 129 gtgcgccgacagcacgaggaagaacatgaaggctgaggccggtttcaagggtcttcaggt 188 Query: 214 ggcgatcaagtgca 227 |||||||||||||| Sbjct: 189 ggcgatcaagtgca 202
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 42.1 bits (21), Expect = 0.77 Identities = 21/21 (100%) Strand = Plus / Minus Query: 186 ccgaggaggccttcaagcgtc 206 ||||||||||||||||||||| Sbjct: 4364222 ccgaggaggccttcaagcgtc 4364202
>ref|XM_478117.1| Oryza sativa (japonica cultivar-group), mRNA Length = 708 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 290 gtctccgtgtggcgatcaagtgca 313
>ref|NM_000631.3| Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 1, mRNA Length = 1386 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 676 catggcagctccgagagcag 695
>ref|NM_013416.2| Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4), transcript variant 2, mRNA Length = 1631 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 676 catggcagctccgagagcag 695
>emb|AL008637.1|HS833B7 Human DNA sequence from clone CTA-833B7 on chromosome 22q12.3-13.2 Contains the NCF4 gene for cytosolic neutrophil factor 4 (40kD), the 5' part of the CSF2RB gene for granulocyte-macrophage low-affinity colony stimulating factor 2 receptor beta, ESTs, STSs and GSSs, complete sequence Length = 86574 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 23058 catggcagctccgagagcag 23077
>emb|AL645913.12| Mouse DNA sequence from clone RP23-194G14 on chromosome 11 Contains the 3' end of gene 9130006A14Rik, the 5' end of the Rnf130 gene for ring finger protein 130 and a CpG island, complete sequence Length = 131007 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 38 ctcagagattcagacatggc 57 |||||||||||||||||||| Sbjct: 71532 ctcagagattcagacatggc 71551
>gb|BT007346.1| Homo sapiens neutrophil cytosolic factor 4, 40kDa mRNA, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 507 catggcagctccgagagcag 526
>emb|CR616659.1| full-length cDNA clone CS0DI011YP10 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1353 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 685 catggcagctccgagagcag 704
>emb|CR595418.1| full-length cDNA clone CS0DG002YG06 of B cells (Ramos cell line) of Homo sapiens (human) Length = 1325 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 618 catggcagctccgagagcag 637
>emb|CR595164.1| full-length cDNA clone CS0DI002YI05 of Placenta Cot 25-normalized of Homo sapiens (human) Length = 1339 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 667 catggcagctccgagagcag 686
>emb|CR542078.1| Homo sapiens full open reading frame cDNA clone RZPDo834E1136D for gene NCF4, neutrophil cytosolic factor 4, 40kDa; complete cds, incl. stopcodon Length = 1020 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 507 catggcagctccgagagcag 526
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 17751816 gtctccgtgtggcgatcaagtgca 17751839
>dbj|AK223324.1| Homo sapiens mRNA for neutrophil cytosolic factor 4 (40kD) isoform 1 variant, clone: TMS07761 Length = 1396 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 662 catggcagctccgagagcag 681
>gb|AE004500.1| Pseudomonas aeruginosa PAO1, section 61 of 529 of the complete genome Length = 11849 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggcggcgtccttcgtggtcg 143 |||||||||||||||||||| Sbjct: 2970 ggcggcgtccttcgtggtcg 2989
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 204 gtctccgggtggcgatcaagtgca 227 ||||||| |||||||||||||||| Sbjct: 56569 gtctccgtgtggcgatcaagtgca 56592
>gb|AY889680.1| Synthetic construct Homo sapiens clone FLH012150.01X neutrophil cytosolic factor 4 40kDa (NCF4) mRNA, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 507 catggcagctccgagagcag 526
>gb|AY889679.1| Synthetic construct Homo sapiens clone FLH012149.01X neutrophil cytosolic factor 4 40kDa (NCF4) mRNA, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 507 catggcagctccgagagcag 526
>emb|CR456528.1| Homo sapiens NCF4 full length open reading frame (ORF) cDNA clone (cDNA clone C22ORF:pGEM.NCF4.V2) Length = 1206 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 588 catggcagctccgagagcag 607
>gb|DQ314880.1| Homo sapiens neutrophil cytosolic factor 4, 40kDa (NCF4) gene, complete cds Length = 20929 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 12649 catggcagctccgagagcag 12668
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 178 catgaacgccgaggaggccttcaa 201 ||||||||||||| |||||||||| Sbjct: 1606273 catgaacgccgagaaggccttcaa 1606296
>gb|BC002798.1| Homo sapiens neutrophil cytosolic factor 4, 40kDa, transcript variant 2, mRNA (cDNA clone MGC:3810 IMAGE:3634177), complete cds Length = 1713 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 691 catggcagctccgagagcag 710
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 40.1 bits (20), Expect = 3.0 Identities = 23/24 (95%) Strand = Plus / Plus Query: 189 aggaggccttcaagcgtctccggg 212 |||||||||||||||| ||||||| Sbjct: 1606481 aggaggccttcaagcggctccggg 1606504
>gb|U50725.1|HSP40PHX06 Human p40-phox (NCF4) gene, exon 6 Length = 142 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 74 catggcagctccgagagcag 93
>emb|X77094.1|HSP40PHOX H.sapiens mRNA for p40phox Length = 1245 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 637 catggcagctccgagagcag 656
>gb|M33814.1|PSEGDC P.aeruginosa trpG, trpD, and trpC genes, complete cds Length = 2807 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 124 ggcggcgtccttcgtggtcg 143 |||||||||||||||||||| Sbjct: 1122 ggcggcgtccttcgtggtcg 1141
>dbj|AB025220.1| Homo sapiens NCF-4 mRNA for p40phox, complete cds Length = 1056 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 543 catggcagctccgagagcag 562
>dbj|AB025219.1| Homo sapiens NCF4 mRNA for p40phox, complete cds Length = 1301 Score = 40.1 bits (20), Expect = 3.0 Identities = 20/20 (100%) Strand = Plus / Plus Query: 52 catggcagctccgagagcag 71 |||||||||||||||||||| Sbjct: 543 catggcagctccgagagcag 562 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,857,216 Number of Sequences: 3902068 Number of extensions: 1857216 Number of successful extensions: 31960 Number of sequences better than 10.0: 75 Number of HSP's better than 10.0 without gapping: 75 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 31592 Number of HSP's gapped (non-prelim): 364 length of query: 236 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 214 effective length of database: 17,147,199,772 effective search space: 3669500751208 effective search space used: 3669500751208 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
