Clone Information

BLAST Search Result

Clone Name	baet78c04
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1	155	2e-38
2	AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx ca...	152	2e-37
3	LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like ...	147	5e-36
4	LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like ...	147	9e-36
5	LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like ...	146	1e-35
6	LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2	146	1e-35
7	LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like ...	137	6e-33
8	LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like ...	130	7e-31
9	LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like ...	129	2e-30
10	LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like ...	126	2e-29
11	LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3	124	8e-29
12	LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like ...	119	3e-27
13	LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4	115	4e-26
14	HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engra...	33	0.20
15	AXN1_MOUSE (O35625) Axin-1 (Axis inhibition protein 1) (Fused pr...	31	0.74
16	YKW5_YEAST (P36030) Hypothetical UPF0320 protein YKL225W	30	1.3
17	YRRI_BACSU (O34472) Hypothetical UPF0118 protein yrrI	30	1.3
18	AXN1_RAT (O70239) Axin-1 (Axis inhibition protein 1) (rAxin)	30	1.3
19	YQHB_BACSU (P54505) Hypothetical UPF0053 protein yqhB	30	1.7
20	VE7_RHPV1 (P22161) Protein E7	30	2.2
21	LLDP_ECOLI (P33231) L-lactate permease	30	2.2
22	LLDP_ECOL6 (P65253) L-lactate permease	30	2.2
23	LLDP_ECO57 (P65254) L-lactate permease	30	2.2
24	O1052_MOUSE (Q8VGR8) Olfactory receptor 1052 (Olfactory receptor...	29	2.8
25	HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor	28	4.8
26	AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)	28	4.8
27	CCG8_NEUCR (Q01306) Clock-controlled protein 8	28	6.3
28	PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2...	28	6.3
29	PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2...	28	6.3
30	CSUP_DROME (Q9V3A4) Protein catecholamines up	28	6.3
31	ADCA_STRP1 (Q9A0L9) Zinc-binding protein adcA precursor	28	6.3
32	HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide	28	6.3
33	HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide	28	6.3
34	H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC ...	28	8.2
35	LLDP_SALTY (Q8ZL63) L-lactate permease	28	8.2
36	LLDP_SALTI (Q8Z2E3) L-lactate permease	28	8.2
37	Y317_STAAW (Q8NYA5) Hypothetical UPF0324 membrane protein MW0317	28	8.2
38	Y317_STAAS (Q6GCD1) Hypothetical UPF0324 membrane protein SAS0317	28	8.2
39	H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC ...	28	8.2
40	SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouc...	28	8.2

>LAX1_ORYSA (Q5N892) Auxin transporter-like protein 1|
          Length = 492

 Score =  155 bits (393), Expect = 2e-38
 Identities = 76/80 (95%), Positives = 77/80 (96%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYR+ASAR NAAEKPPFFLPSWT
Sbjct: 371 IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRTASARMNAAEKPPFFLPSWT 430

Query: 181 XMFVLNAFIVVWVLVVGFGL 240
            MFVLN FIVVWVLVVGFGL
Sbjct: 431 GMFVLNMFIVVWVLVVGFGL 450

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>AUX1_ARATH (Q96247) Auxin transporter protein 1 (Auxin influx carrier protein|
           1) (Polar auxin transport inhibitor resistant protein 1)
          Length = 485

 Score =  152 bits (385), Expect = 2e-37
 Identities = 71/79 (89%), Positives = 77/79 (97%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLVSFTVYIIP+LAH+LTYRSASAR NAAEKPPFF+PSWT
Sbjct: 363 IWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLAHMLTYRSASARQNAAEKPPFFMPSWT 422

Query: 181 XMFVLNAFIVVWVLVVGFG 237
            M+VLNAF+VVWVL+VGFG
Sbjct: 423 AMYVLNAFVVVWVLIVGFG 441

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>LAX2_MEDTR (Q9FEL7) Auxin transporter-like protein 2 (AUX1-like protein 2)|
           (MtLAX2)
          Length = 484

 Score =  147 bits (372), Expect = 5e-36
 Identities = 68/79 (86%), Positives = 74/79 (93%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLVSFTVYIIP+ AH+LTYR ASAR NAAEKPPFF+PSWT
Sbjct: 363 IWFLAIIFPFFGPINSAVGALLVSFTVYIIPSAAHMLTYRKASARKNAAEKPPFFMPSWT 422

Query: 181 XMFVLNAFIVVWVLVVGFG 237
            M++ NAFIV+WVLVVGFG
Sbjct: 423 AMYIFNAFIVIWVLVVGFG 441

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>LAX4_MEDTR (Q8L884) Auxin transporter-like protein 4 (AUX1-like protein 4)|
           (MtLAX4)
          Length = 482

 Score =  147 bits (370), Expect = 9e-36
 Identities = 70/79 (88%), Positives = 75/79 (94%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLV+FTVYIIPALAH+LTYR+ASAR NA EKPP FLPSWT
Sbjct: 363 IWFLAIIFPFFGPINSAVGALLVTFTVYIIPALAHMLTYRTASARKNAVEKPPSFLPSWT 422

Query: 181 XMFVLNAFIVVWVLVVGFG 237
            ++VLNAFIVVWVLVVGFG
Sbjct: 423 AVYVLNAFIVVWVLVVGFG 441

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>LAX1_ARATH (Q9LFB2) Auxin transporter-like protein 1 (AUX1-like protein 1)|
          Length = 488

 Score =  146 bits (369), Expect = 1e-35
 Identities = 68/79 (86%), Positives = 76/79 (96%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLV+FTVYIIPALAH+LTYR+ASAR NAAEKPPFF+PSW 
Sbjct: 369 IWFLAIIFPFFGPINSAVGALLVTFTVYIIPALAHMLTYRTASARRNAAEKPPFFIPSWA 428

Query: 181 XMFVLNAFIVVWVLVVGFG 237
            ++V+NAFIVVWVLV+GFG
Sbjct: 429 GVYVINAFIVVWVLVLGFG 447

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>LAX2_ORYSA (Q688J2) Auxin transporter-like protein 2|
          Length = 482

 Score =  146 bits (369), Expect = 1e-35
 Identities = 70/80 (87%), Positives = 75/80 (93%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLVSFTVYIIP+L+HILTYRSASAR NAAEKPP FLPSW+
Sbjct: 362 IWFLAIIFPFFGPINSAVGALLVSFTVYIIPSLSHILTYRSASARLNAAEKPPPFLPSWS 421

Query: 181 XMFVLNAFIVVWVLVVGFGL 240
            MFV+N F+V WVLVVGFGL
Sbjct: 422 GMFVVNVFVVAWVLVVGFGL 441

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>LAX1_MEDTR (Q9FEL8) Auxin transporter-like protein 1 (AUX1-like protein 1)|
           (MtLAX1)
          Length = 479

 Score =  137 bits (346), Expect = 6e-33
 Identities = 64/79 (81%), Positives = 72/79 (91%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVGALLVSFTVY+IPA AH+LTYRSASAR NAAEK P  +PSWT
Sbjct: 362 IWFLAIIFPFFGPINSAVGALLVSFTVYVIPASAHMLTYRSASARQNAAEKLPKVIPSWT 421

Query: 181 XMFVLNAFIVVWVLVVGFG 237
            M+V+NAF+V+WV +VGFG
Sbjct: 422 LMYVINAFVVIWVTIVGFG 440

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>LAX2_ARATH (Q9S836) Auxin transporter-like protein 2 (AUX1-like protein 2)|
          Length = 483

 Score =  130 bits (328), Expect = 7e-31
 Identities = 61/79 (77%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINS VG+LLVSFTVYIIPALAHI T+RS++AR NA E+PP FL  WT
Sbjct: 357 IWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFRSSAARENAVEQPPRFLGRWT 416

Query: 181 XMFVLNAFIVVWVLVVGFG 237
             F +NAFIVVWV +VGFG
Sbjct: 417 GAFTINAFIVVWVFIVGFG 435

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>LAX5_MEDTR (Q8L883) Auxin transporter-like protein 5 (AUX1-like protein 5)|
           (MtLAX5)
          Length = 490

 Score =  129 bits (324), Expect = 2e-30
 Identities = 60/79 (75%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINS VG+LLVSFTVYIIPALAHI T++S+SAR NA E+PP F+  W 
Sbjct: 359 IWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWV 418

Query: 181 XMFVLNAFIVVWVLVVGFG 237
             FV+N FIVVWVL+VGFG
Sbjct: 419 GTFVINVFIVVWVLIVGFG 437

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>LAX3_MEDTR (Q9FEL6) Auxin transporter-like protein 3 (AUX1-like protein 3)|
           (MtLAX3)
          Length = 465

 Score =  126 bits (316), Expect = 2e-29
 Identities = 58/80 (72%), Positives = 67/80 (83%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINS VG+LLVSFTVYIIPALAH++T+ SA AR NA E+PP FL  W 
Sbjct: 356 IWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHMVTFASAPARENAVERPPSFLGGWV 415

Query: 181 XMFVLNAFIVVWVLVVGFGL 240
            ++ +N F+ VWVLVVGFGL
Sbjct: 416 GLYSVNVFVAVWVLVVGFGL 435

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>LAX3_ORYSA (Q7XGU4) Auxin transporter-like protein 3|
          Length = 547

 Score =  124 bits (310), Expect = 8e-29
 Identities = 56/79 (70%), Positives = 68/79 (86%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVG+LLVSFTVYIIP+LA+++T+RS  +R NA E+PP F   WT
Sbjct: 378 IWFLAIIFPFFGPINSAVGSLLVSFTVYIIPSLAYMVTFRSPQSRQNAVERPPRFAGGWT 437

Query: 181 XMFVLNAFIVVWVLVVGFG 237
             +V+N+F+V WVLVVGFG
Sbjct: 438 GAYVINSFVVAWVLVVGFG 456

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>LAX3_ARATH (Q9CA25) Auxin transporter-like protein 3 (AUX1-like protein 3)|
          Length = 470

 Score =  119 bits (297), Expect = 3e-27
 Identities = 55/79 (69%), Positives = 64/79 (81%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLAIIFPFFGPINSAVG+LLVSFTVYIIPALAH+LT+  A +R NA E+PP  +  W 
Sbjct: 361 IWFLAIIFPFFGPINSAVGSLLVSFTVYIIPALAHMLTFAPAPSRENAVERPPRVVGGWM 420

Query: 181 XMFVLNAFIVVWVLVVGFG 237
             + +N F+VVWV VVGFG
Sbjct: 421 GTYCINIFVVVWVFVVGFG 439

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>LAX4_ORYSA (Q53JG7) Putative auxin transporter-like protein 4|
          Length = 480

 Score =  115 bits (287), Expect = 4e-26
 Identities = 53/79 (67%), Positives = 60/79 (75%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWT 180
           IWFLA+IFPFFGPINS VG+ LVSFTVYIIPA+AH+ T+  A+AR NA E PP  L  W 
Sbjct: 372 IWFLAVIFPFFGPINSTVGSFLVSFTVYIIPAMAHMATFAPAAARENAVEPPPRALGGWP 431

Query: 181 XMFVLNAFIVVWVLVVGFG 237
             F  N F+V WVLVVGFG
Sbjct: 432 GTFAANCFVVAWVLVVGFG 450

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>HMEN_ANOGA (O02491) Segmentation polarity homeobox protein engrailed|
          Length = 596

 Score = 33.1 bits (74), Expect = 0.20
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -3

Query: 240 QPEAHHQHPHHDEGVEHEHXRPARQEE 160
           QP  HHQHPHH +   H H +   Q++
Sbjct: 90  QPPHHHQHPHHHQLPHHPHHQHHPQQQ 116

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>AXN1_MOUSE (O35625) Axin-1 (Axis inhibition protein 1) (Fused protein)|
          Length = 863

 Score = 31.2 bits (69), Expect = 0.74
 Identities = 14/30 (46%), Positives = 16/30 (53%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRPARQEEGRLLRRV 139
           HH+H HH   V H   RP  Q E  + RRV
Sbjct: 529 HHRHVHHH--VHHNSARPKEQMEAEVARRV 556

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>YKW5_YEAST (P36030) Hypothetical UPF0320 protein YKL225W|
          Length = 115

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
 Frame = +1

Query: 22  FPFFGPINSAVGA--LLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXMFVL 195
           +P F    S  G+   + +   YIIP L HILT +      N   K P  LP    + + 
Sbjct: 52  YPHFNIYISFSGSKYCITALNAYIIPLLLHILTIQFIHTYFNIPTKSPLKLPKHKNILLF 111

Query: 196 N 198
           N
Sbjct: 112 N 112

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>YRRI_BACSU (O34472) Hypothetical UPF0118 protein yrrI|
          Length = 353

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = +1

Query: 19  IFPFFGPINSAVGALLVSFTVYIIPALAHILT 114
           + P+FGP   AV ALL++ T+ +   L  ++T
Sbjct: 254 VIPYFGPFIGAVPALLIAMTISVKAVLVVVIT 285

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>AXN1_RAT (O70239) Axin-1 (Axis inhibition protein 1) (rAxin)|
          Length = 827

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRPARQEEGRLLRRV 139
           HH+H HH   V H   RP  Q E    RRV
Sbjct: 529 HHRHVHHH--VHHNSARPKEQMEAEAARRV 556

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>YQHB_BACSU (P54505) Hypothetical UPF0053 protein yqhB|
          Length = 442

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 18/50 (36%), Positives = 24/50 (48%)
 Frame = +1

Query: 1   IWFLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANAAE 150
           IWF  I+FPF   +N +  A L++    + PA  H L Y     R   AE
Sbjct: 152 IWFYKIMFPFIWLLNHS--ARLITGVFGLKPASEHELAYTEEELRVLLAE 199

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>VE7_RHPV1 (P22161) Protein E7|
          Length = 113

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
 Frame = -3

Query: 240 QPEAHHQHPHHDEGVEHEHXRPARQEEGRLLRRVGAC-GCG 121
           + E    H H+++   H+H RP   E+G   R V  C  CG
Sbjct: 37  EDEDEVDHHHNNQQQHHQHARPEVPEDGDCYRIVSDCYSCG 77

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>LLDP_ECOLI (P33231) L-lactate permease|
          Length = 551

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  LAIIFPFFGPINSAV-GALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXM 186
           L I+F FF  I   + G +  S+TV I  A+A +L Y+   A A A+    FF   W   
Sbjct: 23  LPILFFFFALIKLKLKGYVAASWTVAIALAVA-LLFYKMPVANALASVVYGFFYGLWPIA 81

Query: 187 FVLNAFIVVWVLVVGFG 237
           +++ A + V+ + V  G
Sbjct: 82  WIIIAAVFVYKISVKTG 98

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>LLDP_ECOL6 (P65253) L-lactate permease|
          Length = 551

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  LAIIFPFFGPINSAV-GALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXM 186
           L I+F FF  I   + G +  S+TV I  A+A +L Y+   A A A+    FF   W   
Sbjct: 23  LPILFFFFALIKLKLKGYVAASWTVAIALAVA-LLFYKMPVANALASVVYGFFYGLWPIA 81

Query: 187 FVLNAFIVVWVLVVGFG 237
           +++ A + V+ + V  G
Sbjct: 82  WIIIAAVFVYKISVKTG 98

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>LLDP_ECO57 (P65254) L-lactate permease|
          Length = 551

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  LAIIFPFFGPINSAV-GALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXM 186
           L I+F FF  I   + G +  S+TV I  A+A +L Y+   A A A+    FF   W   
Sbjct: 23  LPILFFFFALIKLKLKGYVAASWTVAIALAVA-LLFYKMPVANALASVVYGFFYGLWPIA 81

Query: 187 FVLNAFIVVWVLVVGFG 237
           +++ A + V+ + V  G
Sbjct: 82  WIIIAAVFVYKISVKTG 98

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>O1052_MOUSE (Q8VGR8) Olfactory receptor 1052 (Olfactory receptor 172-1)|
          Length = 312

 Score = 29.3 bits (64), Expect = 2.8
 Identities = 23/46 (50%), Positives = 27/46 (58%)
 Frame = +1

Query: 7   FLAIIFPFFGPINSAVGALLVSFTVYIIPALAHILTYRSASARANA 144
           FL +IF   G I  A+G LL+ F  Y+  ALA IL  RSAS R  A
Sbjct: 197 FLLLIFS--GVI--AIGTLLIVFISYLFIALA-ILRIRSASGRQKA 237

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>HRPX_PLALO (P04929) Histidine-rich glycoprotein precursor|
          Length = 351

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 10/21 (47%), Positives = 11/21 (52%)
 Frame = -3

Query: 234 EAHHQHPHHDEGVEHEHXRPA 172
           +AHH H HHD    H H   A
Sbjct: 303 DAHHHHHHHDAHHHHHHHHDA 323



 Score = 27.7 bits (60), Expect = 8.2
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -3

Query: 234 EAHHQHPHHDEGVEHEHXRPA 172
           +AHH H HH +   H H   A
Sbjct: 293 DAHHHHHHHHDAHHHHHHHDA 313

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>AXN1_HUMAN (O15169) Axin-1 (Axis inhibition protein 1) (hAxin)|
          Length = 862

 Score = 28.5 bits (62), Expect = 4.8
 Identities = 13/29 (44%), Positives = 14/29 (48%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRPARQEEGRLLRR 142
           HH+H HH   V H   RP  Q E    RR
Sbjct: 531 HHRHVHHH--VHHSTARPKEQVEAEATRR 557

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>CCG8_NEUCR (Q01306) Clock-controlled protein 8|
          Length = 661

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 3/29 (10%)
 Frame = -3

Query: 240 QPEAHHQH---PHHDEGVEHEHXRPARQE 163
           QP  HHQH   P H +  +H H +  +Q+
Sbjct: 28  QPPQHHQHYEAPQHQQQHQHHHHQQQQQQ 56

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>PO4F2_MOUSE (Q63934) POU domain, class 4, transcription factor 2|
           (Brain-specific homeobox/POU domain protein 3B) (Brn-3B)
           (Brn-3.2)
          Length = 411

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRPARQEEGRLLRRV 139
           HH H HH     H H +P +  EG LL  +
Sbjct: 173 HHHHHHH----HHHHHQPHQALEGELLEHL 198

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>PO4F2_HUMAN (Q12837) POU domain, class 4, transcription factor 2|
           (Brain-specific homeobox/POU domain protein 3B) (Brn-3B)
          Length = 410

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/30 (40%), Positives = 15/30 (50%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRPARQEEGRLLRRV 139
           HH H HH     H H +P +  EG LL  +
Sbjct: 172 HHHHHHH----HHHHHQPHQALEGELLEHL 197

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>CSUP_DROME (Q9V3A4) Protein catecholamines up|
          Length = 449

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 9/14 (64%), Positives = 10/14 (71%)
 Frame = -3

Query: 225 HQHPHHDEGVEHEH 184
           H H HH +G EHEH
Sbjct: 203 HDHHHHHDGEEHEH 216

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>ADCA_STRP1 (Q9A0L9) Zinc-binding protein adcA precursor|
          Length = 515

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 231 AHHQHPHHDEGVEHEHXRPARQEEG 157
           A H HPH D   +HEH +    EEG
Sbjct: 122 AGHDHPHEDADKKHEHNK--HSEEG 144

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>HPN_HELPY (P0A0V6) Histidine-rich metal-binding polypeptide|
          Length = 59

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -3

Query: 228 HHQHPHHDEGVE-HEHXRPARQEEG 157
           HH H HH  G E H H   +  EEG
Sbjct: 15  HHTHHHHYHGGEHHHHHHSSHHEEG 39

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>HPN_HELPJ (P0A0V7) Histidine-rich, metal binding polypeptide|
          Length = 59

 Score = 28.1 bits (61), Expect = 6.3
 Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
 Frame = -3

Query: 228 HHQHPHHDEGVE-HEHXRPARQEEG 157
           HH H HH  G E H H   +  EEG
Sbjct: 15  HHTHHHHYHGGEHHHHHHSSHHEEG 39

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>H6ST3_HUMAN (Q8IZP7) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3)
          Length = 471

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 222 QHPHHDEGVEHEHXRPARQEEGRLLR 145
           Q  HH + +EH+  R  R+EE RL R
Sbjct: 417 QRYHHTKQLEHQRDRQKRREERRLQR 442

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>LLDP_SALTY (Q8ZL63) L-lactate permease|
          Length = 551

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  LAIIFPFFGPINSAV-GALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXM 186
           L I+F FF  I   + G +  S+TV I  A+A +L Y+     A A+    FF   W   
Sbjct: 23  LPILFFFFALIKLKLKGYVAASWTVVIALAVA-LLFYKMPVDHALASVVYGFFYGLWPIA 81

Query: 187 FVLNAFIVVWVLVVGFG 237
           +++ A + V+ + V  G
Sbjct: 82  WIIIAAVFVYKISVKTG 98

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>LLDP_SALTI (Q8Z2E3) L-lactate permease|
          Length = 551

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
 Frame = +1

Query: 10  LAIIFPFFGPINSAV-GALLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXM 186
           L I+F FF  I   + G +  S+TV I  A+A +L Y+     A A+    FF   W   
Sbjct: 23  LPILFFFFALIKLKLKGYVAASWTVVIALAVA-LLFYKMPVDHALASVVYGFFYGLWPIA 81

Query: 187 FVLNAFIVVWVLVVGFG 237
           +++ A + V+ + V  G
Sbjct: 82  WIIIAAVFVYKISVKTG 98

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>Y317_STAAW (Q8NYA5) Hypothetical UPF0324 membrane protein MW0317|
          Length = 331

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 61  LLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXMFVLNAFIVV 213
           LL+  T+ +I     I+ +RS+ + +N     P+FL  +  M ++N ++ +
Sbjct: 222 LLIPLTIVLIL----IMRFRSSESSSNGRISIPYFLIGFVIMALVNTYVTI 268

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>Y317_STAAS (Q6GCD1) Hypothetical UPF0324 membrane protein SAS0317|
          Length = 331

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 13/51 (25%), Positives = 28/51 (54%)
 Frame = +1

Query: 61  LLVSFTVYIIPALAHILTYRSASARANAAEKPPFFLPSWTXMFVLNAFIVV 213
           LL+  T+ +I     I+ +RS+ + +N     P+FL  +  M ++N ++ +
Sbjct: 222 LLIPLTIVLIL----IMRFRSSESSSNGRISIPYFLIGFVIMALVNTYVTI 268

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>H6ST3_MOUSE (Q9QYK4) Heparan-sulfate 6-O-sulfotransferase 3 (EC 2.8.2.-)|
           (HS6ST-3) (mHS6ST-3)
          Length = 470

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = -3

Query: 222 QHPHHDEGVEHEHXRPARQEEGRLLR 145
           Q  HH + +EH+  R  R+EE RL R
Sbjct: 416 QRYHHTKQLEHQRDRQKRREERRLQR 441

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>SLOU_DROME (P22807) Homeobox protein slou (S59/2) (Protein slouch) (Homeobox|
           protein NK-1)
          Length = 659

 Score = 27.7 bits (60), Expect = 8.2
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = -3

Query: 228 HHQHPHHDEGVEHEHXRP 175
           HHQHP H    +H H  P
Sbjct: 209 HHQHPAHPHSHQHPHPHP 226


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 18,290,307
Number of Sequences: 219361
Number of extensions: 236297
Number of successful extensions: 2439
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2319
length of database: 80,573,946
effective HSP length: 56
effective length of database: 68,289,730
effective search space used: 1638953520
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result