ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet78b10
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose... 28 4.9

>GTR3_BOVIN (P58352) Solute carrier family 2, facilitated glucose transporter|
           member 3 (Glucose transporter type 3, brain)
          Length = 494

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 6/47 (12%)
 Frame = +2

Query: 83  GPIVLAFGIGVMINRDSRGHSYFIVR------GEILGFMKTQTQVSI 205
           G ++ +F +G+ +NR  RG+S  IV       G ++GF K    V +
Sbjct: 73  GGMIGSFSVGLFVNRFGRGNSMLIVNLLAIAGGCLMGFCKIAESVEM 119


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,237,563
Number of Sequences: 219361
Number of extensions: 584647
Number of successful extensions: 1148
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1133
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 80,573,946
effective HSP length: 53
effective length of database: 68,947,813
effective search space used: 1654747512
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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