| Clone Name | baet78b06 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016598.1| Zea mays clone Contig431 mRNA sequence Length = 1525 Score = 224 bits (113), Expect = 1e-55 Identities = 194/221 (87%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||| ||||||||||| |||||||| |||||||| || |||||| Sbjct: 377 ttccatggaatgagcagtcagttagttaaggctatgccaagtcttattttcacgaaagtg 436 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||| || |||||||| || || |||||||||||||| ||||| ||||||| |||||| Sbjct: 437 caagaagataactgcacatcatcaatgtgtgccatttgtttggaagactacagtgtcgga 496 Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180 ||| || |||| ||||||||||| |||||||||||||||||||||||||||||| ||||| Sbjct: 497 gaaaagctaagagtgctgccttgtcgtcacaagttccatgcagcttgtgtggacttgtgg 556 Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgaga 221 || || | |||||| |||||||||| || ||||||||||| Sbjct: 557 ctaactgcttggagaacattctgccctgtatgcaagcgaga 597
>ref|XM_470277.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1614 Score = 216 bits (109), Expect = 2e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 631 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 690 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 691 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 750 Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180 ||| | |||| ||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 751 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 810 Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225 |||||| | |||||| | || ||||| || ||||| || |||||| Sbjct: 811 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 855
>dbj|AK070468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D05, full insert sequence Length = 2146 Score = 216 bits (109), Expect = 2e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 1013 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 1072 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 1073 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 1132 Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180 ||| | |||| ||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 1133 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 1192 Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225 |||||| | |||||| | || ||||| || ||||| || |||||| Sbjct: 1193 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 1237
>dbj|AK061519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A03, full insert sequence Length = 1326 Score = 216 bits (109), Expect = 2e-53 Identities = 196/225 (87%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 59 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 118 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 119 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 178 Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180 ||| | |||| ||| |||||||||||||||||||||||||||||||||||||| | ||| Sbjct: 179 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 238 Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225 |||||| | |||||| | || ||||| || ||||| || |||||| Sbjct: 239 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 283
>ref|XM_479675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2263 Score = 159 bits (80), Expect = 5e-36 Identities = 194/232 (83%) Strand = Plus / Plus Query: 4 catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63 ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct: 920 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 979 Query: 64 gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123 || ||||| | || || || ||||||||||||||||| ||||||| | | || ||| Sbjct: 980 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1039 Query: 124 cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183 || |||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1040 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1099 Query: 184 acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235 || || |||| |||||||||| |||||||||||||||||| | ||||||| Sbjct: 1100 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1151
>dbj|AK101543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I07, full insert sequence Length = 2262 Score = 159 bits (80), Expect = 5e-36 Identities = 194/232 (83%) Strand = Plus / Plus Query: 4 catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63 ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct: 920 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 979 Query: 64 gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123 || ||||| | || || || ||||||||||||||||| ||||||| | | || ||| Sbjct: 980 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1039 Query: 124 cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183 || |||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1040 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1099 Query: 184 acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235 || || |||| |||||||||| |||||||||||||||||| | ||||||| Sbjct: 1100 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1151
>dbj|AK066589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A02, full insert sequence Length = 2673 Score = 159 bits (80), Expect = 5e-36 Identities = 194/232 (83%) Strand = Plus / Plus Query: 4 catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63 ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct: 1270 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 1329 Query: 64 gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123 || ||||| | || || || ||||||||||||||||| ||||||| | | || ||| Sbjct: 1330 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1389 Query: 124 cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183 || |||| ||| ||||||| ||||||||||||||||| ||||||||||||||||| | Sbjct: 1390 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1449 Query: 184 acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235 || || |||| |||||||||| |||||||||||||||||| | ||||||| Sbjct: 1450 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1501
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 157 bits (79), Expect = 2e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 3631528 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 3631587 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 3631588 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 3631647 Query: 121 gaacagataagggtgctgccttgccgtcaca 151 ||| | |||| ||| ||||||||||||||| Sbjct: 3631648 gaaaaattaagagtgttgccttgccgtcaca 3631678 Score = 60.0 bits (30), Expect = 3e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || | Sbjct: 3632175 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 3632234 Query: 212 gcaagcgagatgca 225 |||| || |||||| Sbjct: 3632235 gcaaacgtgatgca 3632248
>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete sequence Length = 160738 Score = 157 bits (79), Expect = 2e-35 Identities = 133/151 (88%) Strand = Plus / Minus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 149849 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 149790 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 149789 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 149730 Query: 121 gaacagataagggtgctgccttgccgtcaca 151 ||| | |||| ||| ||||||||||||||| Sbjct: 149729 gaaaaattaagagtgttgccttgccgtcaca 149699 Score = 60.0 bits (30), Expect = 3e-06 Identities = 63/74 (85%) Strand = Plus / Minus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || | Sbjct: 149202 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 149143 Query: 212 gcaagcgagatgca 225 |||| || |||||| Sbjct: 149142 gcaaacgtgatgca 149129
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 157 bits (79), Expect = 2e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 3631639 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 3631698 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 3631699 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 3631758 Query: 121 gaacagataagggtgctgccttgccgtcaca 151 ||| | |||| ||| ||||||||||||||| Sbjct: 3631759 gaaaaattaagagtgttgccttgccgtcaca 3631789 Score = 60.0 bits (30), Expect = 3e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || | Sbjct: 3632286 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 3632345 Query: 212 gcaagcgagatgca 225 |||| || |||||| Sbjct: 3632346 gcaaacgtgatgca 3632359
>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19, complete sequence Length = 150620 Score = 157 bits (79), Expect = 2e-35 Identities = 133/151 (88%) Strand = Plus / Plus Query: 1 ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60 |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || ||| Sbjct: 149181 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 149240 Query: 61 caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120 ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| Sbjct: 149241 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 149300 Query: 121 gaacagataagggtgctgccttgccgtcaca 151 ||| | |||| ||| ||||||||||||||| Sbjct: 149301 gaaaaattaagagtgttgccttgccgtcaca 149331 Score = 60.0 bits (30), Expect = 3e-06 Identities = 63/74 (85%) Strand = Plus / Plus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || | Sbjct: 149828 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 149887 Query: 212 gcaagcgagatgca 225 |||| || |||||| Sbjct: 149888 gcaaacgtgatgca 149901
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 87.7 bits (44), Expect = 2e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 4 catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63 ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct: 224057 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 224116 Query: 64 gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123 || ||||| | || || || ||||||||||||||||| ||||||| | | || ||| Sbjct: 224117 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 224176 Query: 124 cagataagggtgctgccttgccgtcaca 151 || |||| ||| ||||||| ||||||| Sbjct: 224177 aagctaagagtgttgccttgtcgtcaca 224204 Score = 71.9 bits (36), Expect = 9e-10 Identities = 72/84 (85%) Strand = Plus / Plus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 |||||||||| ||||||||||||||||| | || || |||| |||||||||| |||| Sbjct: 224773 agttccatgcgacttgtgtggacatgtggttgacctcgtggaagacattctgccctgtgt 224832 Query: 212 gcaagcgagatgcaggcgctggaa 235 |||||||||||||| | ||||||| Sbjct: 224833 gcaagcgagatgcaagtgctggaa 224856
>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0015C07 Length = 149079 Score = 87.7 bits (44), Expect = 2e-14 Identities = 122/148 (82%) Strand = Plus / Plus Query: 4 catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63 ||||| |||||||||||||| ||||| || |||||||| ||||||||||| ||||||||| Sbjct: 139392 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 139451 Query: 64 gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123 || ||||| | || || || ||||||||||||||||| ||||||| | | || ||| Sbjct: 139452 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 139511 Query: 124 cagataagggtgctgccttgccgtcaca 151 || |||| ||| ||||||| ||||||| Sbjct: 139512 aagctaagagtgttgccttgtcgtcaca 139539 Score = 71.9 bits (36), Expect = 9e-10 Identities = 72/84 (85%) Strand = Plus / Plus Query: 152 agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211 |||||||||| ||||||||||||||||| | || || |||| |||||||||| |||| Sbjct: 140108 agttccatgcgacttgtgtggacatgtggttgacctcgtggaagacattctgccctgtgt 140167 Query: 212 gcaagcgagatgcaggcgctggaa 235 |||||||||||||| | ||||||| Sbjct: 140168 gcaagcgagatgcaagtgctggaa 140191
>gb|AY104743.1| Zea mays PCO116304 mRNA sequence Length = 634 Score = 85.7 bits (43), Expect = 6e-14 Identities = 88/103 (85%) Strand = Plus / Plus Query: 133 gtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctgg 192 ||||| ||||| || |||||||||||||| |||||||||||| | |||||||| || ||| Sbjct: 12 gtgctaccttgtcgacacaagttccatgcggcttgtgtggacctatggctcacctcatgg 71 Query: 193 agatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235 ||| |||||||||| || |||||||| || ||| | ||||||| Sbjct: 72 agaacattctgccctgtatgcaagcgggacgcaagtgctggaa 114
>ref|NM_105856.4| Arabidopsis thaliana peptidase/ protein binding / ubiquitin-protein ligase/ zinc ion binding AT1G71980 mRNA, complete cds Length = 1889 Score = 46.1 bits (23), Expect = 0.052 Identities = 71/87 (81%) Strand = Plus / Plus Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198 |||||| |||||||||| ||||| || ||||| ||| ||| | || || |||||| | Sbjct: 1029 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1088 Query: 199 ttctgcccggtgtgcaagcgagatgca 225 ||||| ||||||||||| ||||||||| Sbjct: 1089 ttctgtccggtgtgcaaacgagatgca 1115
>gb|AY133843.1| Arabidopsis thaliana clone U11850 unknown protein (At1g71980) mRNA, complete cds Length = 1378 Score = 46.1 bits (23), Expect = 0.052 Identities = 71/87 (81%) Strand = Plus / Plus Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198 |||||| |||||||||| ||||| || ||||| ||| ||| | || || |||||| | Sbjct: 745 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 804 Query: 199 ttctgcccggtgtgcaagcgagatgca 225 ||||| ||||||||||| ||||||||| Sbjct: 805 ttctgtccggtgtgcaaacgagatgca 831
>gb|AY065385.1| Arabidopsis thaliana unknown protein (At1g71980) mRNA, complete cds Length = 1834 Score = 46.1 bits (23), Expect = 0.052 Identities = 71/87 (81%) Strand = Plus / Plus Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198 |||||| |||||||||| ||||| || ||||| ||| ||| | || || |||||| | Sbjct: 1027 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1086 Query: 199 ttctgcccggtgtgcaagcgagatgca 225 ||||| ||||||||||| ||||||||| Sbjct: 1087 ttctgtccggtgtgcaaacgagatgca 1113
>emb|BX814904.1|CNS0AALY Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS18ZA04 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1861 Score = 46.1 bits (23), Expect = 0.052 Identities = 71/87 (81%) Strand = Plus / Plus Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198 |||||| |||||||||| ||||| || ||||| ||| ||| | || || |||||| | Sbjct: 1031 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1090 Query: 199 ttctgcccggtgtgcaagcgagatgca 225 ||||| ||||||||||| ||||||||| Sbjct: 1091 ttctgtccggtgtgcaaacgagatgca 1117
>gb|AF218808.1|AF218808 Arabidopsis thaliana ReMembR-H2 protein JR702 mRNA, partial cds Length = 1404 Score = 46.1 bits (23), Expect = 0.052 Identities = 71/87 (81%) Strand = Plus / Plus Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198 |||||| |||||||||| ||||| || ||||| ||| ||| | || || |||||| | Sbjct: 734 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 793 Query: 199 ttctgcccggtgtgcaagcgagatgca 225 ||||| ||||||||||| ||||||||| Sbjct: 794 ttctgtccggtgtgcaaacgagatgca 820
>emb|BX842630.1| Neurospora crassa DNA linkage group I BAC contig B13D15 Length = 127789 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Plus Query: 87 gtgtgccatttgcttggagga 107 ||||||||||||||||||||| Sbjct: 121379 gtgtgccatttgcttggagga 121399
>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete sequence Length = 195733 Score = 42.1 bits (21), Expect = 0.81 Identities = 21/21 (100%) Strand = Plus / Minus Query: 175 atgtggctcacatcctggaga 195 ||||||||||||||||||||| Sbjct: 119740 atgtggctcacatcctggaga 119720
>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete sequence Length = 80413 Score = 40.1 bits (20), Expect = 3.2 Identities = 32/36 (88%) Strand = Plus / Plus Query: 190 tggagatcattctgcccggtgtgcaagcgagatgca 225 |||||| | ||||| ||||||||||| ||||||||| Sbjct: 71668 tggagaactttctgtccggtgtgcaaacgagatgca 71703 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,788,955 Number of Sequences: 3902068 Number of extensions: 1788955 Number of successful extensions: 33329 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 22 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 33250 Number of HSP's gapped (non-prelim): 74 length of query: 247 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 225 effective length of database: 17,147,199,772 effective search space: 3858119948700 effective search space used: 3858119948700 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)