ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet78b06
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1gb|BT016598.1| Zea mays clone Contig431 mRNA sequence 224 1e-55
2ref|XM_470277.1| Oryza sativa (japonica cultivar-group), mRNA 216 2e-53
3dbj|AK070468.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 2e-53
4dbj|AK061519.1| Oryza sativa (japonica cultivar-group) cDNA clon... 216 2e-53
5ref|XM_479675.1| Oryza sativa (japonica cultivar-group), mRNA 159 5e-36
6dbj|AK101543.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 5e-36
7dbj|AK066589.1| Oryza sativa (japonica cultivar-group) cDNA clon... 159 5e-36
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 157 2e-35
9gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 geno... 157 2e-35
10dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 157 2e-35
11gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome... 157 2e-35
12dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
13dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic D... 88 2e-14
14gb|AY104743.1| Zea mays PCO116304 mRNA sequence 86 6e-14
15ref|NM_105856.4| Arabidopsis thaliana peptidase/ protein binding... 46 0.052
16gb|AY133843.1| Arabidopsis thaliana clone U11850 unknown protein... 46 0.052
17gb|AY065385.1| Arabidopsis thaliana unknown protein (At1g71980) ... 46 0.052
18emb|BX814904.1|CNS0AALY Arabidopsis thaliana Full-length cDNA Co... 46 0.052
19gb|AF218808.1|AF218808 Arabidopsis thaliana ReMembR-H2 protein J... 46 0.052
20emb|BX842630.1| Neurospora crassa DNA linkage group I BAC contig... 42 0.81
21emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on ch... 42 0.81
22gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17... 40 3.2

>gb|BT016598.1| Zea mays clone Contig431 mRNA sequence
          Length = 1525

 Score =  224 bits (113), Expect = 1e-55
 Identities = 194/221 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
           |||||||| ||||||||||| ||||||||||| |||||||| |||||||| || ||||||
Sbjct: 377 ttccatggaatgagcagtcagttagttaaggctatgccaagtcttattttcacgaaagtg 436

                                                                       
Query: 61  caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
           ||||| || |||||||| || || |||||||||||||| ||||| ||||||| |||||| 
Sbjct: 437 caagaagataactgcacatcatcaatgtgtgccatttgtttggaagactacagtgtcgga 496

                                                                       
Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180
           ||| || |||| ||||||||||| |||||||||||||||||||||||||||||| |||||
Sbjct: 497 gaaaagctaagagtgctgccttgtcgtcacaagttccatgcagcttgtgtggacttgtgg 556

                                                    
Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgaga 221
           || ||  | |||||| |||||||||| || |||||||||||
Sbjct: 557 ctaactgcttggagaacattctgccctgtatgcaagcgaga 597



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>ref|XM_470277.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1614

 Score =  216 bits (109), Expect = 2e-53
 Identities = 196/225 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
           |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 631 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 690

                                                                       
Query: 61  caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
           ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 691 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 750

                                                                       
Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180
           ||| |  |||| ||| |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 751 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 810

                                                        
Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225
           |||||| | |||||| | || ||||| || ||||| || ||||||
Sbjct: 811 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 855



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>dbj|AK070468.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023052D05, full
            insert sequence
          Length = 2146

 Score =  216 bits (109), Expect = 2e-53
 Identities = 196/225 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
            |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 1013 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 1072

                                                                        
Query: 61   caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
            ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 1073 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 1132

                                                                        
Query: 121  gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180
            ||| |  |||| ||| |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 1133 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 1192

                                                         
Query: 181  ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225
            |||||| | |||||| | || ||||| || ||||| || ||||||
Sbjct: 1193 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 1237



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>dbj|AK061519.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-310-A03, full
           insert sequence
          Length = 1326

 Score =  216 bits (109), Expect = 2e-53
 Identities = 196/225 (87%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
           |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 59  ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 118

                                                                       
Query: 61  caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
           ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 119 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 178

                                                                       
Query: 121 gaacagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtgg 180
           ||| |  |||| ||| |||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 179 gaaaaattaagagtgttgccttgccgtcacaagttccatgcagcttgtgtggacctttgg 238

                                                        
Query: 181 ctcacatcctggagatcattctgcccggtgtgcaagcgagatgca 225
           |||||| | |||||| | || ||||| || ||||| || ||||||
Sbjct: 239 ctcacaacttggagaactttttgccctgtatgcaaacgtgatgca 283



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>ref|XM_479675.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2263

 Score =  159 bits (80), Expect = 5e-36
 Identities = 194/232 (83%)
 Strand = Plus / Plus

                                                                        
Query: 4    catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63
            ||||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 920  catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 979

                                                                        
Query: 64   gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123
            || |||||  | || || ||    ||||||||||||||||| ||||||| | | || |||
Sbjct: 980  gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1039

                                                                        
Query: 124  cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183
             || |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||| | 
Sbjct: 1040 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1099

                                                                
Query: 184  acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235
            || || ||||   |||||||||| |||||||||||||||||| | |||||||
Sbjct: 1100 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1151



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>dbj|AK101543.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033048I07, full
            insert sequence
          Length = 2262

 Score =  159 bits (80), Expect = 5e-36
 Identities = 194/232 (83%)
 Strand = Plus / Plus

                                                                        
Query: 4    catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63
            ||||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 920  catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 979

                                                                        
Query: 64   gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123
            || |||||  | || || ||    ||||||||||||||||| ||||||| | | || |||
Sbjct: 980  gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1039

                                                                        
Query: 124  cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183
             || |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||| | 
Sbjct: 1040 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1099

                                                                
Query: 184  acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235
            || || ||||   |||||||||| |||||||||||||||||| | |||||||
Sbjct: 1100 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1151



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>dbj|AK066589.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013073A02, full
            insert sequence
          Length = 2673

 Score =  159 bits (80), Expect = 5e-36
 Identities = 194/232 (83%)
 Strand = Plus / Plus

                                                                        
Query: 4    catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63
            ||||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 1270 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 1329

                                                                        
Query: 64   gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123
            || |||||  | || || ||    ||||||||||||||||| ||||||| | | || |||
Sbjct: 1330 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 1389

                                                                        
Query: 124  cagataagggtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctc 183
             || |||| ||| ||||||| |||||||||||||||||  ||||||||||||||||| | 
Sbjct: 1390 aagctaagagtgttgccttgtcgtcacaagttccatgcgacttgtgtggacatgtggttg 1449

                                                                
Query: 184  acatcctggagatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235
            || || ||||   |||||||||| |||||||||||||||||| | |||||||
Sbjct: 1450 acctcgtggaagacattctgccctgtgtgcaagcgagatgcaagtgctggaa 1501



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  157 bits (79), Expect = 2e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 1       ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
               |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 3631528 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 3631587

                                                                           
Query: 61      caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
               ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 3631588 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 3631647

                                              
Query: 121     gaacagataagggtgctgccttgccgtcaca 151
               ||| |  |||| ||| |||||||||||||||
Sbjct: 3631648 gaaaaattaagagtgttgccttgccgtcaca 3631678



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 152     agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
               ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || |
Sbjct: 3632175 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 3632234

                             
Query: 212     gcaagcgagatgca 225
               |||| || ||||||
Sbjct: 3632235 gcaaacgtgatgca 3632248



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>gb|AC073556.11| Oryza sativa chromosome 3 BAC OSJNBa0091P11 genomic sequence, complete
              sequence
          Length = 160738

 Score =  157 bits (79), Expect = 2e-35
 Identities = 133/151 (88%)
 Strand = Plus / Minus

                                                                          
Query: 1      ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
              |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 149849 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 149790

                                                                          
Query: 61     caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
              ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 149789 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 149730

                                             
Query: 121    gaacagataagggtgctgccttgccgtcaca 151
              ||| |  |||| ||| |||||||||||||||
Sbjct: 149729 gaaaaattaagagtgttgccttgccgtcaca 149699



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 63/74 (85%)
 Strand = Plus / Minus

                                                                          
Query: 152    agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
              ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || |
Sbjct: 149202 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 149143

                            
Query: 212    gcaagcgagatgca 225
              |||| || ||||||
Sbjct: 149142 gcaaacgtgatgca 149129



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  157 bits (79), Expect = 2e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                           
Query: 1       ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
               |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 3631639 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 3631698

                                                                           
Query: 61      caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
               ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 3631699 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 3631758

                                              
Query: 121     gaacagataagggtgctgccttgccgtcaca 151
               ||| |  |||| ||| |||||||||||||||
Sbjct: 3631759 gaaaaattaagagtgttgccttgccgtcaca 3631789



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                           
Query: 152     agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
               ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || |
Sbjct: 3632286 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 3632345

                             
Query: 212     gcaagcgagatgca 225
               |||| || ||||||
Sbjct: 3632346 gcaaacgtgatgca 3632359



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>gb|AC107225.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0026H19,
              complete sequence
          Length = 150620

 Score =  157 bits (79), Expect = 2e-35
 Identities = 133/151 (88%)
 Strand = Plus / Plus

                                                                          
Query: 1      ttccatgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtg 60
              |||||||| ||||||||||||||||| ||||| |||||||||||||| || || || |||
Sbjct: 149181 ttccatggaatgagcagtcaattagtcaaggcaatgccaagccttatcttcacgaaggtg 149240

                                                                          
Query: 61     caagaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggg 120
              ||||||||||||||||| || || |||||||||||||||||||| ||||||| |||||| 
Sbjct: 149241 caagaggacaactgcacatcatcaatgtgtgccatttgcttggaagactacaatgtcgga 149300

                                             
Query: 121    gaacagataagggtgctgccttgccgtcaca 151
              ||| |  |||| ||| |||||||||||||||
Sbjct: 149301 gaaaaattaagagtgttgccttgccgtcaca 149331



 Score = 60.0 bits (30), Expect = 3e-06
 Identities = 63/74 (85%)
 Strand = Plus / Plus

                                                                          
Query: 152    agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
              ||||||||||||||||||||||| | ||||||||| | |||||| | || ||||| || |
Sbjct: 149828 agttccatgcagcttgtgtggacctttggctcacaacttggagaactttttgccctgtat 149887

                            
Query: 212    gcaagcgagatgca 225
              |||| || ||||||
Sbjct: 149888 gcaaacgtgatgca 149901



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>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8,
              complete sequence
          Length = 28434780

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 122/148 (82%)
 Strand = Plus / Plus

                                                                          
Query: 4      catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63
              ||||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 224057 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 224116

                                                                          
Query: 64     gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123
              || |||||  | || || ||    ||||||||||||||||| ||||||| | | || |||
Sbjct: 224117 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 224176

                                          
Query: 124    cagataagggtgctgccttgccgtcaca 151
               || |||| ||| ||||||| |||||||
Sbjct: 224177 aagctaagagtgttgccttgtcgtcaca 224204



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                          
Query: 152    agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
              ||||||||||  ||||||||||||||||| | || || ||||   |||||||||| ||||
Sbjct: 224773 agttccatgcgacttgtgtggacatgtggttgacctcgtggaagacattctgccctgtgt 224832

                                      
Query: 212    gcaagcgagatgcaggcgctggaa 235
              |||||||||||||| | |||||||
Sbjct: 224833 gcaagcgagatgcaagtgctggaa 224856



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>dbj|AP004654.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC
              clone:P0015C07
          Length = 149079

 Score = 87.7 bits (44), Expect = 2e-14
 Identities = 122/148 (82%)
 Strand = Plus / Plus

                                                                          
Query: 4      catgggatgagcagtcaattagttaaggcgatgccaagccttatttttaccaaagtgcaa 63
              ||||| |||||||||||||| ||||| || |||||||| ||||||||||| |||||||||
Sbjct: 139392 catggaatgagcagtcaattggttaaagcaatgccaagtcttatttttacaaaagtgcaa 139451

                                                                          
Query: 64     gaggacaactgcacgtcgtcgatgtgtgccatttgcttggaggactacactgtcggggaa 123
              || |||||  | || || ||    ||||||||||||||||| ||||||| | | || |||
Sbjct: 139452 gaagacaatagtacatcatcatcttgtgccatttgcttggaagactacagttttggagaa 139511

                                          
Query: 124    cagataagggtgctgccttgccgtcaca 151
               || |||| ||| ||||||| |||||||
Sbjct: 139512 aagctaagagtgttgccttgtcgtcaca 139539



 Score = 71.9 bits (36), Expect = 9e-10
 Identities = 72/84 (85%)
 Strand = Plus / Plus

                                                                          
Query: 152    agttccatgcagcttgtgtggacatgtggctcacatcctggagatcattctgcccggtgt 211
              ||||||||||  ||||||||||||||||| | || || ||||   |||||||||| ||||
Sbjct: 140108 agttccatgcgacttgtgtggacatgtggttgacctcgtggaagacattctgccctgtgt 140167

                                      
Query: 212    gcaagcgagatgcaggcgctggaa 235
              |||||||||||||| | |||||||
Sbjct: 140168 gcaagcgagatgcaagtgctggaa 140191



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>gb|AY104743.1| Zea mays PCO116304 mRNA sequence
          Length = 634

 Score = 85.7 bits (43), Expect = 6e-14
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                       
Query: 133 gtgctgccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctgg 192
           ||||| ||||| || |||||||||||||| |||||||||||| | |||||||| || |||
Sbjct: 12  gtgctaccttgtcgacacaagttccatgcggcttgtgtggacctatggctcacctcatgg 71

                                                      
Query: 193 agatcattctgcccggtgtgcaagcgagatgcaggcgctggaa 235
           ||| |||||||||| || |||||||| || ||| | |||||||
Sbjct: 72  agaacattctgccctgtatgcaagcgggacgcaagtgctggaa 114



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>ref|NM_105856.4| Arabidopsis thaliana peptidase/ protein binding / ubiquitin-protein
            ligase/ zinc ion binding AT1G71980 mRNA, complete cds
          Length = 1889

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                        
Query: 139  ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198
            |||||| |||||||||| ||||| || ||||| |||   ||| | || || |||||| | 
Sbjct: 1029 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1088

                                       
Query: 199  ttctgcccggtgtgcaagcgagatgca 225
            ||||| ||||||||||| |||||||||
Sbjct: 1089 ttctgtccggtgtgcaaacgagatgca 1115



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>gb|AY133843.1| Arabidopsis thaliana clone U11850 unknown protein (At1g71980) mRNA,
           complete cds
          Length = 1378

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198
           |||||| |||||||||| ||||| || ||||| |||   ||| | || || |||||| | 
Sbjct: 745 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 804

                                      
Query: 199 ttctgcccggtgtgcaagcgagatgca 225
           ||||| ||||||||||| |||||||||
Sbjct: 805 ttctgtccggtgtgcaaacgagatgca 831



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>gb|AY065385.1| Arabidopsis thaliana unknown protein (At1g71980) mRNA, complete cds
          Length = 1834

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                        
Query: 139  ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198
            |||||| |||||||||| ||||| || ||||| |||   ||| | || || |||||| | 
Sbjct: 1027 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1086

                                       
Query: 199  ttctgcccggtgtgcaagcgagatgca 225
            ||||| ||||||||||| |||||||||
Sbjct: 1087 ttctgtccggtgtgcaaacgagatgca 1113



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>emb|BX814904.1|CNS0AALY Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS18ZA04 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1861

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                        
Query: 139  ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198
            |||||| |||||||||| ||||| || ||||| |||   ||| | || || |||||| | 
Sbjct: 1031 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 1090

                                       
Query: 199  ttctgcccggtgtgcaagcgagatgca 225
            ||||| ||||||||||| |||||||||
Sbjct: 1091 ttctgtccggtgtgcaaacgagatgca 1117



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>gb|AF218808.1|AF218808 Arabidopsis thaliana ReMembR-H2 protein JR702 mRNA, partial cds
          Length = 1404

 Score = 46.1 bits (23), Expect = 0.052
 Identities = 71/87 (81%)
 Strand = Plus / Plus

                                                                       
Query: 139 ccttgccgtcacaagttccatgcagcttgtgtggacatgtggctcacatcctggagatca 198
           |||||| |||||||||| ||||| || ||||| |||   ||| | || || |||||| | 
Sbjct: 734 ccttgctgtcacaagtttcatgctgcgtgtgttgactcatggttaacctcttggagaact 793

                                      
Query: 199 ttctgcccggtgtgcaagcgagatgca 225
           ||||| ||||||||||| |||||||||
Sbjct: 794 ttctgtccggtgtgcaaacgagatgca 820



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>emb|BX842630.1| Neurospora crassa DNA linkage group I BAC contig B13D15
          Length = 127789

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 87     gtgtgccatttgcttggagga 107
              |||||||||||||||||||||
Sbjct: 121379 gtgtgccatttgcttggagga 121399



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>emb|AL928960.25| Mouse DNA sequence from clone RP23-413K16 on chromosome 2, complete
              sequence
          Length = 195733

 Score = 42.1 bits (21), Expect = 0.81
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 175    atgtggctcacatcctggaga 195
              |||||||||||||||||||||
Sbjct: 119740 atgtggctcacatcctggaga 119720



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>gb|AC021665.7|AC021665 Arabidopsis thaliana chromosome 1 BAC F17M19 genomic sequence, complete
             sequence
          Length = 80413

 Score = 40.1 bits (20), Expect = 3.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                 
Query: 190   tggagatcattctgcccggtgtgcaagcgagatgca 225
             |||||| | ||||| ||||||||||| |||||||||
Sbjct: 71668 tggagaactttctgtccggtgtgcaaacgagatgca 71703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,788,955
Number of Sequences: 3902068
Number of extensions: 1788955
Number of successful extensions: 33329
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 33250
Number of HSP's gapped (non-prelim): 74
length of query: 247
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 225
effective length of database: 17,147,199,772
effective search space: 3858119948700
effective search space used: 3858119948700
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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