ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet77h07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein... 361 5e-97
2gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3)... 321 4e-85
3emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific l... 313 1e-82
4emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non sp... 313 1e-82
5emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific l... 236 2e-59
6emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non sp... 236 2e-59
7ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-g... 44 0.15
8dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 44 0.15
9gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel... 44 0.15
10gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatibli... 42 0.57
11gb|AF114829.1| Oryza sativa lipid transfer protein gene, complet... 42 0.57
12emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes T... 42 0.57
13gb|AE015451.1| Pseudomonas putida KT2440 complete genome 42 0.57
14gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precurs... 42 0.57
15ref|XM_475667.1| Oryza sativa (japonica cultivar-group), predic... 40 2.3
16gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
17gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA... 40 2.3
18emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on ch... 40 2.3
19emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carb... 40 2.3
20gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare str... 40 2.3
21emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liv... 40 2.3
22dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG20141... 40 2.3
23emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus o... 40 2.3
24emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta ... 40 2.3
25emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cell... 40 2.3
26emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liv... 40 2.3
27ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQ... 40 2.3
28dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail... 40 2.3
29gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds 40 2.3
30dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
31dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 2.3
32dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 2.3
33dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 40 2.3
34dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 2.3
35dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, parti... 40 2.3
36gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 40 2.3
37emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chro... 40 2.3
38ref|NM_019140.2| Rattus norvegicus protein tyrosine phosphatase,... 38 8.9
39gb|BC105753.1| Rattus norvegicus protein tyrosine phosphatase, r... 38 8.9
40gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosom... 38 8.9
41gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, co... 38 8.9
42gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster 38 8.9
43gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, co... 38 8.9
44emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete ... 38 8.9
45emb|BX640427.1| Bordetella parapertussis strain 12822, complete ... 38 8.9
46emb|BX640417.1| Bordetella pertussis strain Tohama I, complete g... 38 8.9
47emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC... 38 8.9
48emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A stra... 38 8.9
49emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chr... 38 8.9
50emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chro... 38 8.9
51gb|AF455755.1|AF455755 Homo sapiens BAM mRNA, complete cds 38 8.9
52dbj|AK077815.1| Mus musculus adult male thymus cDNA, RIKEN full-... 38 8.9
53gb|AE002098.2| Neisseria meningitidis MC58, complete genome 38 8.9
54dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 38 8.9
55gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete ... 38 8.9
56gb|AC171128.2| Helobdella robusta clone CH306-1A10, complete seq... 38 8.9
57gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, comple... 38 8.9
58gb|AC138710.5| Homo sapiens chromosome 17, clone RP11-822E23, co... 38 8.9
59dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete... 38 8.9
60dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic D... 38 8.9
61emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome comple... 38 8.9
62gb|AE014299.1| Shewanella oneidensis MR-1, complete genome 38 8.9
63gb|U47026.1|ALU47026 Alcaligenes latus poly(3-hydroxyalkanoate) ... 38 8.9
64gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome 38 8.9
65gb|AF004933.1|AF004933 Alcaligenes latus poly-deta-hydroxybutyri... 38 8.9
66gb|AF078795.1|AF078795 Alcaligenes latus polyhydroxyalkanoate sy... 38 8.9
67dbj|D13457.1|STMCHO Streptomyces sp. genes for hypothetic proteins 38 8.9
68gb|L11587.1|RATLARPTPA Rat leukocyte common antigen-related phos... 38 8.9
69dbj|D16254.1|SYOXXOS S.vulcanus gene for cytochrome c oxidase su... 38 8.9
70emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC... 38 8.9 
>emb|X96979.1|HVLTP7A2B H.vulgare mRNA for lipid transfer protein 7a2b
          Length = 755

 Score =  361 bits (182), Expect = 5e-97
 Identities = 182/182 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 126 gccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 185

                                                                       
Query: 61  ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 186 ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggagg 245

                                                                       
Query: 121 gcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 305

             
Query: 181 ag 182
           ||
Sbjct: 306 ag 307
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>gb|AY226580.1| Triticum aestivum lipid transfer protein 3 (LTP3) mRNA, complete
           cds
          Length = 555

 Score =  321 bits (162), Expect = 4e-85
 Identities = 177/182 (97%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gccgccgtggtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 166

                                                                       
Query: 61  ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggagg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 167 ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtgacggggagg 226

                                                                       
Query: 121 gcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 180
           || ||  |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 gcgtcctcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 286

             
Query: 181 ag 182
           ||
Sbjct: 287 ag 288
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>emb|AJ784900.2| Triticum aestivum mRNA for type 1 non-specific lipid transfer
           protein precursor (ltp9.4 gene)
          Length = 771

 Score =  313 bits (158), Expect = 1e-82
 Identities = 176/182 (96%)
 Strand = Plus / Plus

                                                                       
Query: 1   gccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 60
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 gccgccgtggtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 165

                                                                       
Query: 61  ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggagg 120
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 166 ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtaacggggagg 225

                                                                       
Query: 121 gcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 180
           || ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 226 gcgtcctcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcatggcccgc 285

             
Query: 181 ag 182
           ||
Sbjct: 286 ag 287
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>emb|AJ852541.1| Triticum aestivum ltp9.4a gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 1965

 Score =  313 bits (158), Expect = 1e-82
 Identities = 176/182 (96%)
 Strand = Plus / Plus

                                                                        
Query: 1    gccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 60
            |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 874  gccgccgtggtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcg 933

                                                                        
Query: 61   ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggagg 120
            |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 934  ctgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtgacggggagg 993

                                                                        
Query: 121  gcttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgc 180
            || ||  |||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 994  gcgtcctcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcatggcccgc 1053

              
Query: 181  ag 182
            ||
Sbjct: 1054 ag 1055
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>emb|AJ852561.1| Triticum aestivum mRNA for type 1 non specific lipid transfer
           protein precursor (ltp9.4b gene)
          Length = 776

 Score =  236 bits (119), Expect = 2e-59
 Identities = 166/181 (91%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                       
Query: 2   ccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcgc 61
           ||||||| |||||||||||||||||||| ||||||||||||||||||||   | |||| |
Sbjct: 103 ccgccgtggtcctggcggcggtggtgctaatgatggccggcagggaggc---gacggcac 159

                                                                       
Query: 62  tgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggaggg 121
           ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||
Sbjct: 160 tgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtgtcgtacgtgacggggaagg 219

                                                                       
Query: 122 cttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgca 181
           |  |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 220 cgccctcgatcagcaaggagtgctgctccggtgtgcaggggctgaacggcctggcccgca 279

            
Query: 182 g 182
           |
Sbjct: 280 g 280
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>emb|AJ852548.1| Triticum aestivum ltp9.4b gene for type 1 non specific lipid transfer
            protein precursor, exons 1-2
          Length = 2000

 Score =  236 bits (119), Expect = 2e-59
 Identities = 166/181 (91%), Gaps = 3/181 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2    ccgccgttgtcctggcggcggtggtgctgatgatggccggcagggaggcctcggcggcgc 61
            ||||||| |||||||||||||||||||| ||||||||||||||||||||   | |||| |
Sbjct: 1039 ccgccgtggtcctggcggcggtggtgctaatgatggccggcagggaggc---gacggcac 1095

                                                                        
Query: 62   tgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtggcgtacgtcacggggaggg 121
            ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||| ||
Sbjct: 1096 tgtcgtgcgggcaggtggactccaagctcgcgccgtgcgtgtcgtacgtgacggggaagg 1155

                                                                        
Query: 122  cttctgcgatcagcaaggagtgctgctccggcgtgcaggggctgaacggcctggcccgca 181
            |  |  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1156 cgccctcgatcagcaaggagtgctgctccggtgtgcaggggctgaacggcctggcccgca 1215

             
Query: 182  g 182
            |
Sbjct: 1216 g 1216
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>ref|NM_001009072.1| Pan troglodytes sodium channel, nonvoltage-gated 1, delta (SCNN1D),
           mRNA
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 14  tggcggcggtggtgctgatgatggcc 39
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 18     ggcggtggtgctgatgatggccggca 43
              |||||||||||||||| |||||||||
Sbjct: 803414 ggcggtggtgctgatggtggccggca 803389



 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 42      cagggaggcctcggcggcg 60
               |||||||||||||||||||
Sbjct: 4569208 cagggaggcctcggcggcg 4569190
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>gb|AF038165.1|AF038165 Pan troglodytes epithelial sodium channel delta subunit mRNA,
           complete cds
          Length = 1917

 Score = 44.1 bits (22), Expect = 0.15
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                     
Query: 14  tggcggcggtggtgctgatgatggcc 39
           |||||||||||||||||||| |||||
Sbjct: 120 tggcggcggtggtgctgatggtggcc 95
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>gb|AY152826.1| Felis catus clone BAC 102h1 major histocompatiblity complex extended
             and classical class II region, partial sequence
          Length = 132445

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 21    ggtggtgctgatgatggccggcagg 45
             ||||||||||||||| |||||||||
Sbjct: 91051 ggtggtgctgatgatagccggcagg 91075
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>gb|AF114829.1| Oryza sativa lipid transfer protein gene, complete cds
          Length = 1802

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 89  tcgcgccgtgcgtggcgtacgtcacggggaggg 121
           ||||||||||| || ||||||||| ||||||||
Sbjct: 676 tcgcgccgtgcctgtcgtacgtcatggggaggg 708
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>emb|X73563.1|SBLPBL1A Streptomyces bambergiensis plasmid genes TRA1 - TRA5 and ORF4 and
           ORF7
          Length = 5746

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 13  ctggcggcggtggtgctgatg 33
           |||||||||||||||||||||
Sbjct: 418 ctggcggcggtggtgctgatg 438
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>gb|AE015451.1| Pseudomonas putida KT2440 complete genome
          Length = 6181863

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 12      cctggcggcggtggtgctgat 32
               |||||||||||||||||||||
Sbjct: 3082673 cctggcggcggtggtgctgat 3082653
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>gb|U29176.1|OSU29176 Oryza sativa lipid transfer protein precursor, mRNA, partial cds
          Length = 466

 Score = 42.1 bits (21), Expect = 0.57
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                            
Query: 89  tcgcgccgtgcgtggcgtacgtcacggggaggg 121
           ||||||||||| || ||||||||| ||||||||
Sbjct: 52  tcgcgccgtgcctgtcgtacgtcatggggaggg 84
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>ref|XM_475667.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1500

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 3   cgccgttgtcctggcggcggtggtgctg 30
           |||||| |||||||||||| ||||||||
Sbjct: 84  cgccgtcgtcctggcggcgctggtgctg 111
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>gb|AC130601.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0108E17, complete sequence
          Length = 139829

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                         
Query: 3     cgccgttgtcctggcggcggtggtgctg 30
             |||||| |||||||||||| ||||||||
Sbjct: 35657 cgccgtcgtcctggcggcgctggtgctg 35684
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>gb|BC013566.1| Homo sapiens aquaporin 3 (Gill blood group), mRNA (cDNA clone
          MGC:8708 IMAGE:3877096), complete cds
          Length = 1810

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 26 cggcggcgctgtcgggcgggcagg 3
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>emb|AL356218.22| Human DNA sequence from clone RP11-311H10 on chromosome 9 Contains the
             3' end of the NFX1 gene for X-box binding nuclear
             transcription factor 1,  the AQP7 and AQP3 genes for
             aquaporin 7 and 3, a novel gene, the gene for nucleolar
             RNA-associated protein alpha, beta and gamma and a CpG
             island, complete sequence
          Length = 142839

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 53    cggcggcgctgtcgtgcgggcagg 76
             |||||||||||||| |||||||||
Sbjct: 93195 cggcggcgctgtcgggcgggcagg 93218
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>emb|X54488.1|CRCAH2 Chlamydomonas reinhardtii CAH2 gene for carbonic dehydratase
          Length = 4858

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                        
Query: 15   ggcggcggtggtgctgatgatggccggc 42
            ||||| ||||||| ||||||||||||||
Sbjct: 3462 ggcggtggtggtggtgatgatggccggc 3435
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>gb|AC091734.3| Genomic Sequence for Oryza sativa, Nipponbare strain, clone
              OSJNBa0068A07, from Chromosome 10, complete sequence
          Length = 154505

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 26     tgctgatgatggccggcagg 45
              ||||||||||||||||||||
Sbjct: 103196 tgctgatgatggccggcagg 103177
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>emb|CR624600.1| full-length cDNA clone CS0DM001YP02 of Fetal liver of Homo
          sapiens (human)
          Length = 1780

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 39 cggcggcgctgtcgggcgggcagg 16
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>dbj|AK095363.1| Homo sapiens cDNA FLJ38044 fis, clone CTONG2014119, moderately
          similar to AQUAPORIN 3
          Length = 2911

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 55 cggcggcgctgtcgggcgggcagg 32
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>emb|CR604170.1| full-length cDNA clone CS0CAP003YG18 of Thymus of Homo sapiens
          (human)
          Length = 1786

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 34 cggcggcgctgtcgggcgggcagg 11
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>emb|CR599108.1| full-length cDNA clone CS0DI014YP03 of Placenta Cot 25-normalized
          of Homo sapiens (human)
          Length = 1797

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 63 cggcggcgctgtcgggcgggcagg 40
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>emb|CR599072.1| full-length cDNA clone CS0DK011YG17 of HeLa cells Cot
          25-normalized of Homo sapiens (human)
          Length = 1790

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 31 cggcggcgctgtcgggcgggcagg 8
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>emb|CR592288.1| full-length cDNA clone CS0DM009YA04 of Fetal liver of Homo
          sapiens (human)
          Length = 1793

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 36 cggcggcgctgtcgggcgggcagg 13
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>ref|NM_004925.3| Homo sapiens aquaporin 3 (Gill blood group) (AQP3), mRNA
          Length = 1835

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 51 cggcggcgctgtcgggcgggcagg 28
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>dbj|AB001325.1| Homo sapiens AQP3 mRNA for aquaporine 3, partail cds
          Length = 1442

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                  
Query: 53 cggcggcgctgtcgtgcgggcagg 76
          |||||||||||||| |||||||||
Sbjct: 49 cggcggcgctgtcgggcgggcagg 26
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>gb|DQ083949.1| Homo sapiens aquaporin 3 (AQP3) gene, complete cds
          Length = 13709

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 53   cggcggcgctgtcgtgcgggcagg 76
            |||||||||||||| |||||||||
Sbjct: 2862 cggcggcgctgtcgggcgggcagg 2839
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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       tgctgatgatggccggcagg 45
                ||||||||||||||||||||
Sbjct: 12583109 tgctgatgatggccggcagg 12583090
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                            
Query: 3        cgccgttgtcctggcggcggtggtgctg 30
                |||||| |||||||||||| ||||||||
Sbjct: 24966804 cgccgtcgtcctggcggcgctggtgctg 24966831
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 44      gggaggcctcggcggcgctg 63
               ||||||||||||||||||||
Sbjct: 6984484 gggaggcctcggcggcgctg 6984503
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>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 10      gtcctggcggcggtggtgctgatg 33
               |||||||||||||||| |||||||
Sbjct: 3618757 gtcctggcggcggtggcgctgatg 3618734
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>dbj|AK106758.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-115-D09, full
            insert sequence
          Length = 3740

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                        
Query: 3    cgccgttgtcctggcggcggtggtgctg 30
            |||||| |||||||||||| ||||||||
Sbjct: 1564 cgccgtcgtcctggcggcgctggtgctg 1591
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>dbj|D50486.1|HUMA3 Homo sapiens AQP3 gene for aquaporin 3, partial cds and 5' flanking
           region
          Length = 333

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 53  cggcggcgctgtcgtgcgggcagg 76
           |||||||||||||| |||||||||
Sbjct: 312 cggcggcgctgtcgggcgggcagg 289
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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 26       tgctgatgatggccggcagg 45
                ||||||||||||||||||||
Sbjct: 12590449 tgctgatgatggccggcagg 12590430
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>emb|AL670673.15| Mouse DNA sequence from clone RP23-32L5 on chromosome 4, complete
             sequence
          Length = 202412

 Score = 40.1 bits (20), Expect = 2.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 14    tggcggcggtggtgctgatgatgg 37
             |||||||||||||| |||||||||
Sbjct: 72003 tggcggcggtggtggtgatgatgg 71980
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>ref|NM_019140.2| Rattus norvegicus protein tyrosine phosphatase, receptor type, D
            (Ptprd), mRNA
          Length = 6040

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   ggaggcctcggcggcgctg 63
            |||||||||||||||||||
Sbjct: 2725 ggaggcctcggcggcgctg 2743
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>gb|BC105753.1| Rattus norvegicus protein tyrosine phosphatase, receptor type, D,
            mRNA (cDNA clone MGC:124537 IMAGE:5599711), complete cds
          Length = 7119

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   ggaggcctcggcggcgctg 63
            |||||||||||||||||||
Sbjct: 3100 ggaggcctcggcggcgctg 3118
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>gb|AC159998.6| Mus musculus BAC clone RP24-576J22 from chromosome 10, complete
             sequence
          Length = 166313

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 18    ggcggtggtgctgatgatg 36
             |||||||||||||||||||
Sbjct: 72187 ggcggtggtgctgatgatg 72205
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>gb|AC157931.11| Mus musculus chromosome 5, clone RP24-159I10, complete sequence
          Length = 147518

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 31    atgatggccggcagggagg 49
             |||||||||||||||||||
Sbjct: 10875 atgatggccggcagggagg 10893
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>gb|AF061282.1| Sorghum bicolor 22 kDa kafirin cluster
          Length = 162249

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     cagggaggcctcggcggcg 60
              |||||||||||||||||||
Sbjct: 124672 cagggaggcctcggcggcg 124654



 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 42     cagggaggcctcggcggcg 60
              |||||||||||||||||||
Sbjct: 115800 cagggaggcctcggcggcg 115782
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>gb|AC113504.10| Mus musculus chromosome 5, clone RP23-370G17, complete sequence
          Length = 219617

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 31     atgatggccggcagggagg 49
              |||||||||||||||||||
Sbjct: 145088 atgatggccggcagggagg 145106
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>emb|BX640444.1| Bordetella bronchiseptica strain RB50, complete genome; segment 8/16
          Length = 349008

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 32     tgatggccggcagggaggcctcg 54
              |||||||||||||| ||||||||
Sbjct: 119338 tgatggccggcaggtaggcctcg 119360
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>emb|BX640427.1| Bordetella parapertussis strain 12822, complete genome; segment 5/14
          Length = 348997

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 32    tgatggccggcagggaggcctcg 54
             |||||||||||||| ||||||||
Sbjct: 42398 tgatggccggcaggtaggcctcg 42420
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>emb|BX640417.1| Bordetella pertussis strain Tohama I, complete genome; segment 7/12
          Length = 348934

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 32     tgatggccggcagggaggcctcg 54
              |||||||||||||| ||||||||
Sbjct: 187043 tgatggccggcaggtaggcctcg 187021
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>emb|BX088700.1|CNS09S4S DNA centromeric region sequence from BAC DP26B06, DP34F04, DP16D11,
              DP09G08, DP35C12 of chromosome 5  of Podospora anserina
          Length = 322194

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                     
Query: 15     ggcggcggtggtgctgatgatgg 37
              ||||||||||||| |||||||||
Sbjct: 235137 ggcggcggtggtggtgatgatgg 235115
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>emb|AL162755.2|NMA4Z2491 Neisseria meningitidis serogroup A strain Z2491 complete genome; segment
              4/7
          Length = 331801

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     tggcggcggtggtgctgatgatg 36
              |||||||||||||| ||||||||
Sbjct: 125382 tggcggcggtggtgatgatgatg 125404
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>emb|AL592464.24| Human DNA sequence from clone RP11-740P5 on chromosome 1, complete
              sequence
          Length = 120028

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 37     gccggcagggaggcctcggcggcgctg 63
              ||||||||||||| |||||||| ||||
Sbjct: 113460 gccggcagggagggctcggcggtgctg 113434
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>emb|AL596450.8| Mouse DNA sequence from clone RP23-373H2 on chromosome 11 Contains the 3'
              end of the Ddc gene for dopa decarboxylase, the Fignl1 gene
              for fidgetin-like 1, the Znfn1a1 gene for zinc finger
              protein, subfamily 1A, 1 (Ikaros), two novel genes and two
              CpG islands, complete sequence
          Length = 203257

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                 
Query: 54     ggcggcgctgtcgtgcggg 72
              |||||||||||||||||||
Sbjct: 149485 ggcggcgctgtcgtgcggg 149467
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>gb|AF455755.1|AF455755 Homo sapiens BAM mRNA, complete cds
          Length = 2050

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 160  gggctgaacggcctggccc 178
            |||||||||||||||||||
Sbjct: 1653 gggctgaacggcctggccc 1671
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>dbj|AK077815.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
           library, clone:5832432G11 product:zinc finger protein,
           subfamily 1A, 1 (Ikaros), full insert sequence
          Length = 4580

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                              
Query: 54  ggcggcgctgtcgtgcggg 72
           |||||||||||||||||||
Sbjct: 179 ggcggcgctgtcgtgcggg 197
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>gb|AE002098.2| Neisseria meningitidis MC58, complete genome
          Length = 2272360

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                     
Query: 14     tggcggcggtggtgctgatgatg 36
              |||||||||||||| ||||||||
Sbjct: 995014 tggcggcggtggtgatgatgatg 995036
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
               sequence
          Length = 35954743

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 33      gatggccggcagggaggcc 51
               |||||||||||||||||||
Sbjct: 2159875 gatggccggcagggaggcc 2159893
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>gb|AC020709.4|AC020709 Homo sapiens clone RP11-425F18, complete sequence
          Length = 184104

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                         
Query: 37     gccggcagggaggcctcggcggcgctg 63
              ||||||||||||| |||||||| ||||
Sbjct: 103661 gccggcagggagggctcggcggtgctg 103635
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>gb|AC171128.2| Helobdella robusta clone CH306-1A10, complete sequence
          Length = 76716

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 20   cggtggtgctgatgatggc 38
            |||||||||||||||||||
Sbjct: 6366 cggtggtgctgatgatggc 6348
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>gb|AC096670.1| Homo sapiens BAC clone RP11-438K19 from 2, complete sequence
          Length = 181497

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                
Query: 160   gggctgaacggcctggccc 178
             |||||||||||||||||||
Sbjct: 45246 gggctgaacggcctggccc 45228
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>gb|AC138710.5| Homo sapiens chromosome 17, clone RP11-822E23, complete sequence
          Length = 147089

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                 
Query: 35     tggccggcagggaggcctc 53
              |||||||||||||||||||
Sbjct: 120736 tggccggcagggaggcctc 120754
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>dbj|BA000039.2| Thermosynechococcus elongatus BP-1 DNA, complete genome
          Length = 2593857

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                      
Query: 13      ctggcggcggtggtgctgatgat 35
               |||||||||||| ||||||||||
Sbjct: 2095293 ctggcggcggtgatgctgatgat 2095315
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>dbj|AP005294.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1679_B08
          Length = 142529

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                
Query: 33    gatggccggcagggaggcc 51
             |||||||||||||||||||
Sbjct: 74568 gatggccggcagggaggcc 74586
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>emb|AL646052.1| Ralstonia solanacearum GMI1000 chromosome complete sequence
          Length = 3716413

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                                  
Query: 51      ctcggcggcgctgtcgtgc 69
               |||||||||||||||||||
Sbjct: 1310097 ctcggcggcgctgtcgtgc 1310115
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>gb|AE014299.1| Shewanella oneidensis MR-1, complete genome
          Length = 4969803

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                                  
Query: 16      gcggcggtggtgctgatga 34
               |||||||||||||||||||
Sbjct: 1051675 gcggcggtggtgctgatga 1051657
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>gb|U47026.1|ALU47026 Alcaligenes latus poly(3-hydroxyalkanoate) synthesis (phaC, phaA,
           and phaB) genes, complete cds
          Length = 4674

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 22  gtggtgctgatgatggccg 40
           |||||||||||||||||||
Sbjct: 372 gtggtgctgatgatggccg 354
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>gb|AE004969.1| Neisseria gonorrhoeae FA 1090, complete genome
          Length = 2153922

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                      
Query: 14      tggcggcggtggtgctgatgatg 36
               |||||||||||||| ||||||||
Sbjct: 1434093 tggcggcggtggtgatgatgatg 1434071
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>gb|AF004933.1|AF004933 Alcaligenes latus poly-deta-hydroxybutyric acid synthase (phbC)
           gene, complete cds
          Length = 2468

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 22  gtggtgctgatgatggccg 40
           |||||||||||||||||||
Sbjct: 394 gtggtgctgatgatggccg 376
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>gb|AF078795.1|AF078795 Alcaligenes latus polyhydroxyalkanoate synthase protein PhaC
           (phaC), ketothiolase protein PhaA (phaA), and reductase
           protein PhaB (phaB) genes, complete cds
          Length = 4936

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                              
Query: 22  gtggtgctgatgatggccg 40
           |||||||||||||||||||
Sbjct: 233 gtggtgctgatgatggccg 215
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>dbj|D13457.1|STMCHO Streptomyces sp. genes for hypothetic proteins
          Length = 5800

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Minus

                               
Query: 48   ggcctcggcggcgctgtcg 66
            |||||||||||||||||||
Sbjct: 1020 ggcctcggcggcgctgtcg 1002
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>gb|L11587.1|RATLARPTPA Rat leukocyte common antigen-related phosphatase (LAR-PTP2) mRNA,
            complete cds
          Length = 6469

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 19/19 (100%)
 Strand = Plus / Plus

                               
Query: 45   ggaggcctcggcggcgctg 63
            |||||||||||||||||||
Sbjct: 2725 ggaggcctcggcggcgctg 2743
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>dbj|D16254.1|SYOXXOS S.vulcanus gene for cytochrome c oxidase subunits I,II,III,IV,
            complete cds
          Length = 6548

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Minus

                                   
Query: 13   ctggcggcggtggtgctgatgat 35
            |||||||||||| ||||||||||
Sbjct: 5493 ctggcggcggtgatgctgatgat 5471
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>emb|AL627322.1|CNS07TIW DNA centromeric region sequence from BAC DP35C12 of chromosome 5 of
             Podospora anserina
          Length = 101256

 Score = 38.2 bits (19), Expect = 8.9
 Identities = 22/23 (95%)
 Strand = Plus / Plus

                                    
Query: 15    ggcggcggtggtgctgatgatgg 37
             ||||||||||||| |||||||||
Sbjct: 87058 ggcggcggtggtggtgatgatgg 87080


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 1,164,371
Number of Sequences: 3902068
Number of extensions: 1164371
Number of successful extensions: 95871
Number of sequences better than 10.0: 70
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 94324
Number of HSP's gapped (non-prelim): 1545
length of query: 182
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 160
effective length of database: 17,147,199,772
effective search space: 2743551963520
effective search space used: 2743551963520
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 19 (38.2 bits)
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