ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet77f06 |
|---|---|
| Clone Library Name | barley_pub |
>7SB1_SOYBN (P13917) Basic 7S globulin precursor (Bg) (SBg7S) [Contains: Basic| 7S globulin high-kDa subunit; Basic 7S globulin low-kDa subunit] Length = 427 Score = 77.8 bits (190), Expect = 1e-14 Identities = 41/110 (37%), Positives = 59/110 (53%) Frame = +2 Query: 98 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 277 VVLPV+ D +TG + ++RTP + V ++DL G LWV+C+ Y S +Y C S Sbjct: 34 VVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCHSTQ 93 Query: 278 CRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTGGNLITDVLSV 427 C A + C SC PGC +TC N +T+ + G L DVL++ Sbjct: 94 CSRANTHQC-LSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGEDVLAI 142
>7SBG2_SOYBN (Q8RVH5) Basic 7S globulin 2 precursor (Bg) (SBg7S) [Contains:| Basic 7S globulin 2 high-kDa subunit; Basic 7S globulin 2 low-kDa subunit] Length = 433 Score = 77.0 bits (188), Expect = 2e-14 Identities = 40/110 (36%), Positives = 60/110 (54%) Frame = +2 Query: 98 VVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDAGYVSSSYAGVPCASKL 277 +VLPV+ D++TG + ++RTP + V ++DL G LWV+C+ Y S +Y C S Sbjct: 41 LVLPVQNDASTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQHYSSKTYQAPFCHSTQ 100 Query: 278 CRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTGGNLITDVLSV 427 C A + C SC PGC +TC N +T+ + G L DVL++ Sbjct: 101 CSRANTHQC-LSCPAASRPGCHKNTCGLMSTNPITQQTGLGELGQDVLAI 149
>NEP1_NEPGR (Q766C3) Aspartic proteinase nepenthesin-1 precursor (EC 3.4.23.-)| (Nepenthesin-I) Length = 437 Score = 45.8 bits (107), Expect = 4e-05 Identities = 34/126 (26%), Positives = 52/126 (41%), Gaps = 16/126 (12%) Frame = +2 Query: 83 NNPSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA----------- 229 N PS V V + G+YL TP P +A++D G +W C Sbjct: 79 NGPSGVETSVY--AGDGEYLMNLSIGTPAQPFSAIMDTGSDLIWTQCQPCTQCFNQSTPI 136 Query: 230 --GYVSSSYAGVPCASKLCRLAKSVACATSCVGKPSPGCLNDTCS---GFPENTVTRVST 394 SSS++ +PC+S+LC+ SP C N+ C G+ + + T+ S Sbjct: 137 FNPQGSSSFSTLPCSSQLCQALS------------SPTCSNNFCQYTYGYGDGSETQGSM 184 Query: 395 GGNLIT 412 G +T Sbjct: 185 GTETLT 190
>NEP2_NEPGR (Q766C2) Aspartic proteinase nepenthesin-2 precursor (EC 3.4.23.-)| (Nepenthesin-II) Length = 438 Score = 35.0 bits (79), Expect = 0.077 Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 16/117 (13%) Frame = +2 Query: 131 GQYLTGFRQRTPQVPVTAVLDLGGASLWVDCDA-------------GYVSSSYAGVPCAS 271 G+YL TP +A++D G +W C+ SSS++ +PC S Sbjct: 94 GEYLMNVAIGTPDSSFSAIMDTGSDLIWTQCEPCTQCFSQPTPIFNPQDSSSFSTLPCES 153 Query: 272 KLCRLAKSVACATSCVGKPSPGCLNDTCS---GFPENTVTRVSTGGNLITDVLSVPT 433 + C+ PS C N+ C G+ + + T+ G + T+ + T Sbjct: 154 QYCQ------------DLPSETCNNNECQYTYGYGDGSTTQ----GYMATETFTFET 194
>RL10_HALSA (Q9HSS4) 50S ribosomal protein L10e| Length = 176 Score = 30.0 bits (66), Expect = 2.5 Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 5/54 (9%) Frame = +1 Query: 283 PREECGLRHQLRRQAVPGVSERHL*RVPGEHRHARQHRREPH-----HRRAVGA 429 P+EEC LRH +A + RHL + GE + Q R+ PH +++A GA Sbjct: 54 PQEECQLRHG-SLEAARLSANRHLIKELGEGNYKMQLRKFPHQIIRENKQATGA 106
>MYO9B_HUMAN (Q13459) Myosin-9B (Myosin IXb) (Unconventional myosin-9b)| Length = 2158 Score = 30.0 bits (66), Expect = 2.5 Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 3/57 (5%) Frame = -1 Query: 292 LREAAQLXXXXXXXXXXXXVPGVAVHPE---RGASKVEHGRHRDLGRSLPEARQVLP 131 LREA +L PG HPE RGAS +RDL + ++ + LP Sbjct: 698 LREAGRLRAERAEKAAGMSSPGAQSHPEELPRGASTPSEKLYRDLHNQMIKSIKGLP 754
>YAG1_SCHPO (Q09866) Hypothetical WD-repeat protein C12G12.01c in chromosome I| Length = 905 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -1 Query: 211 ERGASKVEHGRHRDLGRSLPEARQVLPRCAV 119 +RG SK +H LG+S P Q LP+C+V Sbjct: 802 QRGVSKAGPAKH--LGKSCPHCGQPLPKCSV 830
>STAN_DROME (Q9V5N8) Protocadherin-like wing polarity protein stan precursor| (Protein starry night) (Protein flamingo) Length = 3574 Score = 29.6 bits (65), Expect = 3.2 Identities = 14/37 (37%), Positives = 20/37 (54%), Gaps = 4/37 (10%) Frame = +2 Query: 218 DCDAGYVSSSYAGV----PCASKLCRLAKSVACATSC 316 +CD+GYV + A + PCAS +CR S+ C Sbjct: 1989 ECDSGYVGTDCAPICTVRPCASGVCRANTSLPRGYDC 2025
>DISA_TRIGA (P15503) Putative venom metalloproteinase precursor (EC 3.4.24.-)| [Contains: Disintegrin trigramin-alpha (Platelet aggregation activation inhibitor)] Length = 480 Score = 29.6 bits (65), Expect = 3.2 Identities = 20/63 (31%), Positives = 25/63 (39%) Frame = +2 Query: 218 DCDAGYVSSSYAGVPCASKLCRLAKSVACATSCVGKPSPGCLNDTCSGFPENTVTRVSTG 397 DCD G S A C + C+L C G D CS E TV R++ G Sbjct: 412 DCDCG----SPANPCCDAATCKLIPGAQCGE--------GLCCDQCSFIEEGTVCRIARG 459 Query: 398 GNL 406 +L Sbjct: 460 DDL 462
>CARPV_CANAL (P10977) Vacuolar aspartic protease precursor (EC 3.4.23.-)| (Aspartate protease) (ACP) Length = 419 Score = 29.3 bits (64), Expect = 4.2 Identities = 14/33 (42%), Positives = 18/33 (54%), Gaps = 3/33 (9%) Frame = +2 Query: 134 QYLTGFRQRTPQVPVTAVLDLGGASLWV---DC 223 QY T + TP P +LD G ++LWV DC Sbjct: 103 QYFTEIQIGTPGQPFKVILDTGSSNLWVPSQDC 135
>MATN3_HUMAN (O15232) Matrilin-3 precursor| Length = 486 Score = 28.5 bits (62), Expect = 7.2 Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 1/30 (3%) Frame = +1 Query: 91 ERRGAAGEEGQR-NGAVPDGLPAANAPGPG 177 E RG G G+R + A PDG PA+ PG Sbjct: 40 ETRGPGGSPGRRPSPAAPDGAPASGTSEPG 69
>CI010_HUMAN (Q9NZB2) Protein C9orf10| Length = 1069 Score = 28.5 bits (62), Expect = 7.2 Identities = 15/35 (42%), Positives = 20/35 (57%) Frame = +2 Query: 89 PSAVVLPVRKDSATGQYLTGFRQRTPQVPVTAVLD 193 PSAVV + A G + G RQR PQ P+ ++D Sbjct: 15 PSAVVPVELQKLARGSLVGGGRQRPPQTPLRLLVD 49
>CO5A3_HUMAN (P25940) Collagen alpha-3(V) chain precursor| Length = 1745 Score = 28.5 bits (62), Expect = 7.2 Identities = 13/31 (41%), Positives = 17/31 (54%) Frame = +1 Query: 88 PERRGAAGEEGQRNGAVPDGLPAANAPGPGD 180 P ++G GE+G + P GLP P PGD Sbjct: 1243 PGKKGPPGEDGAKGSVGPTGLPGDLGP-PGD 1272
>BAI1_HUMAN (O14514) Brain-specific angiogenesis inhibitor 1 precursor| Length = 1584 Score = 28.1 bits (61), Expect = 9.4 Identities = 21/64 (32%), Positives = 30/64 (46%), Gaps = 4/64 (6%) Frame = +2 Query: 212 WVD-CDAGYVSSSYAGV---PCASKLCRLAKSVACATSCVGKPSPGCLNDTCSGFPENTV 379 W+D C AG SS G+ PCA C ++ A + CL D +G PEN + Sbjct: 192 WLDACLAGSRSSHPCGIMQTPCA---CLGGEAGGPAAGPLAPRGDVCLRDAVAGGPENCL 248 Query: 380 TRVS 391 T ++ Sbjct: 249 TSLT 252
>YL54_CAEEL (P34434) Hypothetical protein F44E2.4| Length = 1283 Score = 28.1 bits (61), Expect = 9.4 Identities = 19/46 (41%), Positives = 22/46 (47%) Frame = +2 Query: 221 CDAGYVSSSYAGVPCASKLCRLAKSVACATSCVGKPSPGCLNDTCS 358 CDA SSS S LC L S+ ATSC+ P +TCS Sbjct: 170 CDASKTSSS-------STLCGLVTSIQTATSCLETIRP----ETCS 204
>KR102_HUMAN (P60368) Keratin-associated protein 10-2 (Keratin-associated| protein 10.2) (High sulfur keratin-associated protein 10.2) (Keratin-associated protein 18-2) (Keratin-associated protein 18.2) Length = 255 Score = 28.1 bits (61), Expect = 9.4 Identities = 12/33 (36%), Positives = 15/33 (45%), Gaps = 2/33 (6%) Frame = +2 Query: 263 CASKLCR--LAKSVACATSCVGKPSPGCLNDTC 355 C S C+ KS+ C C G SP C +C Sbjct: 183 CVSVCCKPVCCKSICCVPVCSGASSPCCQQSSC 215 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 49,351,670 Number of Sequences: 219361 Number of extensions: 915625 Number of successful extensions: 4189 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 3822 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4176 length of database: 80,573,946 effective HSP length: 101 effective length of database: 58,418,485 effective search space used: 2453576370 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
