ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baet77d12 |
|---|---|
| Clone Library Name | barley_pub |
>gb|AF199453.1|AF199453 Sorghum bicolor UDP-glucose glucosyltransferase mRNA, complete cds Length = 1479 Score = 73.8 bits (37), Expect = 2e-10 Identities = 67/77 (87%) Strand = Plus / Plus Query: 90 cacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccgcacacgcagctcgcg 149 ||||||||| | || |||||||||| ||| |||||||||||||||| | |||||| ||| Sbjct: 34 cacgtggtgctggtcccgttcccggggcagggccacgtcgcgccgctgatgcagctggcg 93 Query: 150 cgcgtcctccacgcccg 166 ||| ||||||||||||| Sbjct: 94 cgcctcctccacgcccg 110
>ref|XM_471795.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1473 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| ||||| |||||||| | |||||||||||||| Sbjct: 94 ctccacgcccggggcttccacgtcaccctcgtcaacaccgagttcaaccaccgccgcctc 153
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| ||||| |||||||| | |||||||||||||| Sbjct: 98482 ctccacgcccggggcttccacgtcaccctcgtcaacaccgagttcaaccaccgccgcctc 98423
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 63.9 bits (32), Expect = 2e-07 Identities = 53/60 (88%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| ||||| |||||||| | |||||||||||||| Sbjct: 14365563 ctccacgcccggggcttccacgtcaccctcgtcaacaccgagttcaaccaccgccgcctc 14365504 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 15152205 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 15152146 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 15012999 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 15013058 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 14735680 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 14735739 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 14723175 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 14723231 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgcc 133 |||||||||| |||| | |||||||||||||||| || |||||| |||| Sbjct: 22456252 aagccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgcc 22456301 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggccac 125 |||||||||||||||||| |||||| Sbjct: 28288451 cgtgccgttcccggcgcagggccac 28288475 Score = 42.1 bits (21), Expect = 0.87 Identities = 48/57 (84%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 |||||||| || |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 15164819 ctccacgcgcgtggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 15164763 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Minus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 14787104 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 14787052 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 27818946 gtgccgttcccggcgcagggccac 27818923 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 14830445 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 14830504
>ref|XM_506982.1| PREDICTED Oryza sativa (japonica cultivar-group), P0627E03.33 mRNA Length = 1676 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 173 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 214
>ref|XM_467869.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1659 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 176 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 217
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 31824644 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 31824685 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||||| ||||| | |||||||||||||||| || |||||| ||||| Sbjct: 22234653 aagccgcacgcggtgtgcctgccgttcccggcgcaggggcacgtcacgccg 22234703 Score = 48.1 bits (24), Expect = 0.014 Identities = 27/28 (96%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgt 127 ||||||||||||||||||| |||||||| Sbjct: 25444850 tcgtgccgttcccggcgcagggccacgt 25444823 Score = 42.1 bits (21), Expect = 0.87 Identities = 51/61 (83%) Strand = Plus / Plus Query: 154 tcctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcc 213 ||||||||| | | |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 22222212 tcctccacggcaggggcttccacgtcaccttcgtccacaccgagtacaaccaccgccgcc 22222271 Query: 214 t 214 | Sbjct: 22222272 t 22222272 Score = 42.1 bits (21), Expect = 0.87 Identities = 42/49 (85%) Strand = Plus / Plus Query: 86 gccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||| |||| | |||||||||||||||| || |||||| ||||| Sbjct: 22222144 gccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgccg 22222192 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 168 ggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 22234737 ggcttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctc 22234784
>dbj|AP005012.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0627E03 Length = 159861 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 120442 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 120483
>dbj|AK104985.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-107-F12, full insert sequence Length = 1677 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 173 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 214
>dbj|AK073587.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033052B15, full insert sequence Length = 1659 Score = 60.0 bits (30), Expect = 4e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgag 197 |||||||||||||||||| |||||||| ||||| |||||||| Sbjct: 176 ctccacgcccgcggcttcgacgtcacgttcgtgaacaccgag 217
>ref|XM_471848.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1512 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 94 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 153
>ref|XM_471859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 100 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 159
>ref|XM_471823.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1491 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 100 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 159
>emb|AL663022.4|OSJN00222 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0054D14, complete sequence Length = 160587 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 29460 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 29519
>emb|AL731634.4|OSJN00276 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0033P05, complete sequence Length = 120635 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 45100 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 45041 Score = 42.1 bits (21), Expect = 0.87 Identities = 48/57 (84%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 |||||||| || |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 57714 ctccacgcgcgtggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 57658
>dbj|AK106366.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-102-B11, full insert sequence Length = 1457 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Minus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||| |||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 1258 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 1199
>emb|AL606443.3|OSJN00008 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0026L04, complete sequence Length = 129563 Score = 56.0 bits (28), Expect = 6e-05 Identities = 52/60 (86%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||||||||||||||| |||| |||||||| | |||||||||||||| Sbjct: 75334 ctccacgcgcgcggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgcctc 75393 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 62829 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 62885 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Minus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 126758 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 126706
>ref|XM_466409.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1464 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||||| ||||| | |||||||||||||||| || |||||| ||||| Sbjct: 22 aagccgcacgcggtgtgcctgccgttcccggcgcaggggcacgtcacgccg 72 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 168 ggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 106 ggcttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctc 153
>ref|XM_466410.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1506 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||||| ||||| | |||||||||||||||| || |||||| ||||| Sbjct: 1318 aagccgcacgcggtgtgcctgccgttcccggcgcaggggcacgtcacgccg 1268 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 168 ggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 1234 ggcttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctc 1187
>dbj|AP006070.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:B1342F01 Length = 153287 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||||| ||||| | |||||||||||||||| || |||||| ||||| Sbjct: 130497 aagccgcacgcggtgtgcctgccgttcccggcgcaggggcacgtcacgccg 130547 Score = 42.1 bits (21), Expect = 0.87 Identities = 51/61 (83%) Strand = Plus / Plus Query: 154 tcctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcc 213 ||||||||| | | |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 118056 tcctccacggcaggggcttccacgtcaccttcgtccacaccgagtacaaccaccgccgcc 118115 Query: 214 t 214 | Sbjct: 118116 t 118116 Score = 42.1 bits (21), Expect = 0.87 Identities = 42/49 (85%) Strand = Plus / Plus Query: 86 gccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||| |||| | |||||||||||||||| || |||||| ||||| Sbjct: 117988 gccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgccg 118036 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Plus Query: 168 ggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 130581 ggcttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctc 130628
>dbj|AK064085.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-100-B11, full insert sequence Length = 1505 Score = 54.0 bits (27), Expect = 2e-04 Identities = 45/51 (88%) Strand = Plus / Minus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||||| ||||| | |||||||||||||||| || |||||| ||||| Sbjct: 1317 aagccgcacgcggtgtgcctgccgttcccggcgcaggggcacgtcacgccg 1267 Score = 40.1 bits (20), Expect = 3.5 Identities = 41/48 (85%) Strand = Plus / Minus Query: 168 ggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||| |||| |||||||| |||||||||||||| Sbjct: 1233 ggcttccacgtcacgttcgtcaacaccgagtacaaccaccgccgcctc 1186
>ref|XM_471822.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1431 Score = 50.1 bits (25), Expect = 0.004 Identities = 49/57 (85%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 ||||||||||| |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 58 ctccacgcccggggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 114
>ref|XM_466915.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1560 Score = 48.1 bits (24), Expect = 0.014 Identities = 27/28 (96%) Strand = Plus / Plus Query: 100 tcgtgccgttcccggcgcacggccacgt 127 ||||||||||||||||||| |||||||| Sbjct: 65 tcgtgccgttcccggcgcagggccacgt 92
>dbj|AP004192.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1643_A10 Length = 130037 Score = 48.1 bits (24), Expect = 0.014 Identities = 27/28 (96%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgt 127 ||||||||||||||||||| |||||||| Sbjct: 100512 tcgtgccgttcccggcgcagggccacgt 100485
>ref|XM_847833.1| PREDICTED: Canis familiaris similar to mannosidase, beta A, lysosomal-like (LOC610351), mRNA Length = 1157 Score = 46.1 bits (23), Expect = 0.056 Identities = 29/31 (93%) Strand = Plus / Minus Query: 221 cgccgaggccgccgcctcgcccgcctggctc 251 |||||||||| | |||||||||||||||||| Sbjct: 359 cgccgaggcccctgcctcgcccgcctggctc 329
>ref|XM_472671.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1476 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgcc 133 |||||||||| |||| | |||||||||||||||| || |||||| |||| Sbjct: 28 aagccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgcc 77
>ref|XM_874921.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 11 (LOC538474), mRNA Length = 4499 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_874841.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 10 (LOC538474), mRNA Length = 4383 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_874751.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 9 (LOC538474), mRNA Length = 4410 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_874668.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 8 (LOC538474), mRNA Length = 4250 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_580562.2| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 1 (LOC538474), mRNA Length = 1373 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_874257.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 4 (LOC538474), mRNA Length = 4161 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_874171.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 3 (LOC538474), mRNA Length = 4327 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>ref|XM_864731.1| PREDICTED: Bos taurus similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 2 (LOC538474), mRNA Length = 4472 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 215 cgtgctcgccgaggccgccgcc 236 |||||||||||||||||||||| Sbjct: 301 cgtgctcgccgaggccgccgcc 280
>emb|BX248342.1| Mycobacterium bovis subsp. bovis AF2122/97 complete genome; segment 9/14 Length = 306550 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 221 cgccgaggccgccgcctcgccc 242 |||||||||||||||||||||| Sbjct: 150137 cgccgaggccgccgcctcgccc 150158
>emb|AL606615.4|OSJN00048 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0086B14, complete sequence Length = 175698 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgcc 133 |||||||||| |||| | |||||||||||||||| || |||||| |||| Sbjct: 60007 aagccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgcc 60056
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 44.1 bits (22), Expect = 0.22 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccac 125 ||||||||||||||||||| |||||| Sbjct: 9883123 tcgtgccgttcccggcgcagggccac 9883098
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 44.1 bits (22), Expect = 0.22 Identities = 25/26 (96%) Strand = Plus / Minus Query: 221 cgccgaggccgccgcctcgcccgcct 246 |||||||||||||||| ||||||||| Sbjct: 3808497 cgccgaggccgccgccgcgcccgcct 3808472 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 215 cgtgctcgccgaggccgccgc 235 ||||||||||||||||||||| Sbjct: 151166 cgtgctcgccgaggccgccgc 151186 Score = 40.1 bits (20), Expect = 3.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 194 cgagctgcaccaccgccgcctcgtgctc 221 |||||||||||||||||| |||| |||| Sbjct: 4170713 cgagctgcaccaccgccggctcgagctc 4170740
>gb|AF176517.1|AF176517 Oryctolagus cuniculus myosin Vb mRNA, partial cds Length = 1979 Score = 44.1 bits (22), Expect = 0.22 Identities = 25/26 (96%) Strand = Plus / Minus Query: 196 agctgcaccaccgccgcctcgtgctc 221 |||||| ||||||||||||||||||| Sbjct: 305 agctgctccaccgccgcctcgtgctc 280
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Minus Query: 245 ctggctcggcgtcgagggcatc 266 |||||||||||||||||||||| Sbjct: 4860947 ctggctcggcgtcgagggcatc 4860926
>dbj|AP005695.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0063H02 Length = 152326 Score = 44.1 bits (22), Expect = 0.22 Identities = 25/26 (96%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccac 125 ||||||||||||||||||| |||||| Sbjct: 79758 tcgtgccgttcccggcgcagggccac 79733
>dbj|AK068176.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013132G13, full insert sequence Length = 1759 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgcc 133 |||||||||| |||| | |||||||||||||||| || |||||| |||| Sbjct: 110 aagccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgcc 159
>dbj|AK061024.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-F02, full insert sequence Length = 1647 Score = 44.1 bits (22), Expect = 0.22 Identities = 43/50 (86%) Strand = Plus / Plus Query: 84 aagccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgcc 133 |||||||||| |||| | |||||||||||||||| || |||||| |||| Sbjct: 113 aagccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgcc 162
>gb|DQ289495.1| Synthetic construct EpoE (epoE) gene, complete cds Length = 11460 Score = 44.1 bits (22), Expect = 0.22 Identities = 22/22 (100%) Strand = Plus / Plus Query: 113 ggcgcacggccacgtcgcgccg 134 |||||||||||||||||||||| Sbjct: 5770 ggcgcacggccacgtcgcgccg 5791
>ref|XM_483594.1| Oryza sativa (japonica cultivar-group), mRNA Length = 381 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Minus Query: 115 cgcacggccacgtcgcgccgc 135 ||||||||||||||||||||| Sbjct: 168 cgcacggccacgtcgcgccgc 148
>ref|XM_471827.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1494 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 110 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 162
>ref|XM_471860.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1479 Score = 42.1 bits (21), Expect = 0.87 Identities = 48/57 (84%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgc 212 |||||||| || |||||||||||||| |||| |||||||| | ||||||||||| Sbjct: 85 ctccacgcgcgtggcttccacgtcaccttcgtcaacaccgagttcaaccaccgccgc 141
>ref|XM_466406.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1548 Score = 42.1 bits (21), Expect = 0.87 Identities = 51/61 (83%) Strand = Plus / Plus Query: 154 tcctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcc 213 ||||||||| | | |||||||||||||| |||| ||||||||| |||||||||||| Sbjct: 122 tcctccacggcaggggcttccacgtcaccttcgtccacaccgagtacaaccaccgccgcc 181 Query: 214 t 214 | Sbjct: 182 t 182 Score = 42.1 bits (21), Expect = 0.87 Identities = 42/49 (85%) Strand = Plus / Plus Query: 86 gccgcacgtggtgttcgtgccgttcccggcgcacggccacgtcgcgccg 134 |||||||| |||| | |||||||||||||||| || |||||| ||||| Sbjct: 54 gccgcacgccgtgtgcatgccgttcccggcgcaggggcacgtcacgccg 102
>ref|NM_195767.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0027A14.1), mRNA Length = 543 Score = 42.1 bits (21), Expect = 0.87 Identities = 27/29 (93%) Strand = Plus / Plus Query: 100 tcgtgccgttcccggcgcacggccacgtc 128 |||| |||||||||||||| ||||||||| Sbjct: 38 tcgtcccgttcccggcgcagggccacgtc 66
>ref|XM_473518.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1395 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggccac 125 |||||||||||||||||| |||||| Sbjct: 45 cgtgccgttcccggcgcagggccac 69
>gb|AE017180.1| Geobacter sulfurreducens PCA, complete genome Length = 3814139 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 109 tcccggcgcacggccacgtcg 129 ||||||||||||||||||||| Sbjct: 1920029 tcccggcgcacggccacgtcg 1920049
>gb|AC131374.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAb0008A05, complete sequence Length = 124366 Score = 42.1 bits (21), Expect = 0.87 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgtc 128 |||| |||||||||||||| ||||||||| Sbjct: 117915 tcgtcccgttcccggcgcagggccacgtc 117887 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 123677 ccgttcccggcgcagggccacgtc 123654
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 42.1 bits (21), Expect = 0.87 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgtc 128 |||| |||||||||||||| ||||||||| Sbjct: 8913308 tcgtcccgttcccggcgcagggccacgtc 8913280 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 8992435 ccgttcccggcgcagggccacgtc 8992412 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 8919070 ccgttcccggcgcagggccacgtc 8919047
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgcacggccacgtcgcgccgc 135 ||||||||||||||||||||| Sbjct: 27140143 cgcacggccacgtcgcgccgc 27140163 Score = 40.1 bits (20), Expect = 3.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 82 agaagccgcacgtggtgttcgtgccgttcccggcgcacggccac 125 ||||||||||||| | ||||||||| ||||||||| |||||| Sbjct: 24136058 agaagccgcacgtcctcgtcgtgccgtacccggcgcagggccac 24136101 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 19285700 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 19285759
>emb|AL663021.4|OSJN00218 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0041M06, complete sequence Length = 107014 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Minus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 41042 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 40990 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 84383 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 84442
>gb|AC119147.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0027A14, from chromosome 10, complete sequence Length = 175667 Score = 42.1 bits (21), Expect = 0.87 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgtc 128 |||| |||||||||||||| ||||||||| Sbjct: 1531 tcgtcccgttcccggcgcagggccacgtc 1503 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 80658 ccgttcccggcgcagggccacgtc 80635 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 7293 ccgttcccggcgcagggccacgtc 7270
>dbj|AP003914.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1521_G02 Length = 117964 Score = 42.1 bits (21), Expect = 0.87 Identities = 21/21 (100%) Strand = Plus / Plus Query: 115 cgcacggccacgtcgcgccgc 135 ||||||||||||||||||||| Sbjct: 41176 cgcacggccacgtcgcgccgc 41196
>dbj|AK119530.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-203-C07, full insert sequence Length = 1673 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 205 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 257
>dbj|AK111866.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033040N14, full insert sequence Length = 1753 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggccac 125 |||||||||||||||||| |||||| Sbjct: 113 cgtgccgttcccggcgcagggccac 137
>dbj|AK105966.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-E07, full insert sequence Length = 1665 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 202 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 254
>dbj|AK105783.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-202-G07, full insert sequence Length = 1640 Score = 42.1 bits (21), Expect = 0.87 Identities = 45/53 (84%) Strand = Plus / Plus Query: 163 cccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 ||||||||||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 146 cccgcggcttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 198
>gb|AY542311.1| Sorghum bicolor clone SB20O07 b1-1, b1-2, putative genetic modifier, hypothetical protein, putative NAM protein, putative cis-zeatin O-glucosyltransferases, putative small nuclear ribonucleoprotein, putative cis-zeatin O-glucosyltransferase, putative glutathione peroxidase, putative copper-exporting ATPases, putative serine/threonine dehydratase, and putative actin depolymerizing factor genes, complete cds; and hypothetical protein gene, partial cds Length = 157237 Score = 42.1 bits (21), Expect = 0.87 Identities = 30/33 (90%) Strand = Plus / Plus Query: 92 cgtggtgttcgtgccgttcccggcgcacggcca 124 ||||||| |||||||||||||||||| ||||| Sbjct: 68498 cgtggtggccgtgccgttcccggcgcagggcca 68530 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 86964 gtgccgttcccggcgcaaggccac 86987 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 77677 gtgccgttcccggcgcagggccac 77700
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 42.1 bits (21), Expect = 0.87 Identities = 27/29 (93%) Strand = Plus / Minus Query: 100 tcgtgccgttcccggcgcacggccacgtc 128 |||| |||||||||||||| ||||||||| Sbjct: 8918447 tcgtcccgttcccggcgcagggccacgtc 8918419 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 8997574 ccgttcccggcgcagggccacgtc 8997551 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 8924209 ccgttcccggcgcagggccacgtc 8924186
>emb|AL606628.3|OSJN00055 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0017B10, complete sequence Length = 150957 Score = 42.1 bits (21), Expect = 0.87 Identities = 24/25 (96%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggccac 125 |||||||||||||||||| |||||| Sbjct: 80759 cgtgccgttcccggcgcagggccac 80783
>ref|XM_482293.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1494 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 121 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 180
>ref|XM_493867.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1143 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 782 tgctcgccgaggccgccgcc 801
>ref|XM_483068.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1467 Score = 40.1 bits (20), Expect = 3.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 82 agaagccgcacgtggtgttcgtgccgttcccggcgcacggccac 125 ||||||||||||| | ||||||||| ||||||||| |||||| Sbjct: 71 agaagccgcacgtcctcgtcgtgccgtacccggcgcagggccac 114
>ref|XM_471830.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1428 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 121 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 180
>ref|NM_195782.1| Oryza sativa (japonica cultivar-group) hypothetical protein similar to putative retroelements (OSJNBa0027A14.16), mRNA Length = 2778 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 49 ccgttcccggcgcagggccacgtc 72
>ref|NM_195768.1| Oryza sativa (japonica cultivar-group) putative glucosyltransferase (OSJNBa0027A14.2), mRNA Length = 1479 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 105 ccgttcccggcgcacggccacgtc 128 |||||||||||||| ||||||||| Sbjct: 43 ccgttcccggcgcagggccacgtc 66
>ref|XM_473460.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1125 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 25 gtgccgttcccggcgcagggccac 48
>ref|XM_531936.2| PREDICTED: Canis familiaris similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 1 (LOC474709), mRNA Length = 4384 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 255 tgctcgccgaggccgccgcc 236
>ref|XM_859470.1| PREDICTED: Canis familiaris similar to Nuclear factor 1 B-type (Nuclear factor 1/B) (NF1-B) (NFI-B) (NF-I/B) (CCAAT-box binding transcription factor) (CTF) (TGGCA-binding protein), transcript variant 3 (LOC474709), mRNA Length = 4083 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 176 tgctcgccgaggccgccgcc 157
>gb|CP000090.1| Ralstonia eutropha JMP134 chromosome 1, complete sequence Length = 3806533 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 95 ggtgttcgtgccgttcccggcgca 118 |||||||||||||||| ||||||| Sbjct: 2527612 ggtgttcgtgccgttcacggcgca 2527589
>gb|AC123525.2| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBa0056E15, complete sequence Length = 147941 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 97621 acgtggtgttcgtgccgttc 97640
>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome Length = 4501104 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 167 cggcttccacgtcacgctcg 186 |||||||||||||||||||| Sbjct: 1590904 cggcttccacgtcacgctcg 1590885
>emb|AL606647.3|OSJN00096 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0012E24, complete sequence Length = 127506 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 87618 gtgccgttcccggcgcagggccac 87595
>gb|AC151605.2| Emiliania huxleyi clone JGIACCU-13A3, complete sequence Length = 36153 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 203 ccaccgccgcctcgtgctcg 222 |||||||||||||||||||| Sbjct: 28310 ccaccgccgcctcgtgctcg 28329
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 221 cgccgaggccgccgcctcgc 240 |||||||||||||||||||| Sbjct: 267053 cgccgaggccgccgcctcgc 267072
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 1174162 acgtggtgttcgtgccgttc 1174143
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 1292994 acgtggtgttcgtgccgttc 1292975
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cgtgctcgccgaggccgccg 234 |||||||||||||||||||| Sbjct: 20057036 cgtgctcgccgaggccgccg 20057055
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 86093 tgctcgccgaggccgccgcc 86074
>dbj|AP006175.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0669G04 Length = 74610 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 215 cgtgctcgccgaggccgccg 234 |||||||||||||||||||| Sbjct: 64167 cgtgctcgccgaggccgccg 64186
>dbj|AP004620.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0605H02 Length = 175547 Score = 40.1 bits (20), Expect = 3.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 82 agaagccgcacgtggtgttcgtgccgttcccggcgcacggccac 125 ||||||||||||| | ||||||||| ||||||||| |||||| Sbjct: 2397 agaagccgcacgtcctcgtcgtgccgtacccggcgcagggccac 2440
>dbj|AP004557.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0028A08 Length = 150818 Score = 40.1 bits (20), Expect = 3.5 Identities = 38/44 (86%) Strand = Plus / Plus Query: 82 agaagccgcacgtggtgttcgtgccgttcccggcgcacggccac 125 ||||||||||||| | ||||||||| ||||||||| |||||| Sbjct: 89544 agaagccgcacgtcctcgtcgtgccgtacccggcgcagggccac 89587
>dbj|AP004636.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0685B10 Length = 148544 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 15143 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 15202
>dbj|AP003872.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1118_A03 Length = 109873 Score = 40.1 bits (20), Expect = 3.5 Identities = 50/60 (83%) Strand = Plus / Plus Query: 156 ctccacgcccgcggcttccacgtcacgctcgtgcacaccgagctgcaccaccgccgcctc 215 |||||||| ||||| ||||||||||| |||| ||| |||| | |||||||||||||| Sbjct: 58713 ctccacgcgcgcgggttccacgtcaccttcgtcaacaacgagttcaaccaccgccgcctc 58772
>dbj|AK101107.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033025D23, full insert sequence Length = 2456 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 102 gtgccgttcccggcgcacggccac 125 ||||||||||||||||| |||||| Sbjct: 42 gtgccgttcccggcgcagggccac 65
>dbj|AK071024.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023077I15, full insert sequence Length = 1855 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 625 acgtggtgttcgtgccgttc 644
>gb|AF466203.1| Zea mays clone ZMBBb_0092E12, partial sequence Length = 147198 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 101 cgtgccgttcccggcgcacggcca 124 |||||||||||||||||| ||||| Sbjct: 67003 cgtgccgttcccggcgcagggcca 66980
>dbj|AK064690.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-116-E07, full insert sequence Length = 1836 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 831 tgctcgccgaggccgccgcc 850
>gb|AE016825.1| Chromobacterium violaceum ATCC 12472, complete genome Length = 4751080 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 79 agcagaagccgcacgtggtg 98 |||||||||||||||||||| Sbjct: 1608876 agcagaagccgcacgtggtg 1608895
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 1290715 acgtggtgttcgtgccgttc 1290696
>gb|AF318075.1| Zea mays cis-zeatin O-glucosyltransferase (ciszog1) mRNA, complete cds Length = 1404 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggcca 124 |||||||||||||||||| ||||| Sbjct: 39 cgtgccgttcccggcgcagggcca 62
>gb|AY082660.2| Zea mays cis-zeatin O-glucosyltransferase 2 (ciszog2) gene, complete cds Length = 3920 Score = 40.1 bits (20), Expect = 3.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 101 cgtgccgttcccggcgcacggcca 124 |||||||||||||||||| ||||| Sbjct: 2567 cgtgccgttcccggcgcagggcca 2590
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 1174162 acgtggtgttcgtgccgttc 1174143
>emb|BX000509.2|CNS08CDZ Oryza sativa chromosome 12, . BAC OJ1085_G07 of library Monsanto from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 121556 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Plus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 118620 acgtggtgttcgtgccgttc 118639
>emb|BX000495.1|CNS08CDL Oryza sativa chromosome 12, . BAC OSJNBb0119L20 of library OSJNBb from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 126974 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 91 acgtggtgttcgtgccgttc 110 |||||||||||||||||||| Sbjct: 113145 acgtggtgttcgtgccgttc 113126
>gb|AC073405.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0036D10, complete sequence Length = 156772 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 86093 tgctcgccgaggccgccgcc 86074
>gb|AC152969.1| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBb0098I11, complete sequence Length = 122970 Score = 40.1 bits (20), Expect = 3.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 217 tgctcgccgaggccgccgcc 236 |||||||||||||||||||| Sbjct: 95480 tgctcgccgaggccgccgcc 95461 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,451,595 Number of Sequences: 3902068 Number of extensions: 1451595 Number of successful extensions: 41022 Number of sequences better than 10.0: 101 Number of HSP's better than 10.0 without gapping: 98 Number of HSP's successfully gapped in prelim test: 10 Number of HSP's that attempted gapping in prelim test: 39066 Number of HSP's gapped (non-prelim): 1947 length of query: 266 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 244 effective length of database: 17,147,199,772 effective search space: 4183916744368 effective search space used: 4183916744368 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
