ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baet76e11
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1Y1728_MYCBO (P64886) Hypothetical protein Rv1792c/MT1741/Mb1728c 30 1.2
2Y1702_MYCTU (P64885) Hypothetical protein Rv1792c/MT1741/Mb1728c 30 1.2
3S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute car... 28 7.7
4K0415_HUMAN (O43299) Protein KIAA0415 (Fragment) 28 7.7

>Y1728_MYCBO (P64886) Hypothetical protein Rv1792c/MT1741/Mb1728c|
          Length = 454

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 293 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRPPQ 171
           P    V+ C L  LP  VD   R  A   + ++ GRFRP Q
Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQ 168



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>Y1702_MYCTU (P64885) Hypothetical protein Rv1792c/MT1741/Mb1728c|
          Length = 454

 Score = 30.4 bits (67), Expect = 1.2
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = -3

Query: 293 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRPPQ 171
           P    V+ C L  LP  VD   R  A   + ++ GRFRP Q
Sbjct: 128 PAHVQVIRCFLHQLPHHVDLPTREKAEAELATLGGRFRPDQ 168



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>S39A5_HUMAN (Q6ZMH5) Zinc transporter ZIP5 precursor (Solute carrier family 39|
           member 5)
          Length = 539

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 13/26 (50%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -1

Query: 79  KKHEQPPPARAPAGH-SHKTGRKGET 5
           +K+ Q PPA AP GH  H  G +G T
Sbjct: 355 EKNSQHPPALAPPGHQGHSHGHQGGT 380



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>K0415_HUMAN (O43299) Protein KIAA0415 (Fragment)|
          Length = 634

 Score = 27.7 bits (60), Expect = 7.7
 Identities = 16/41 (39%), Positives = 21/41 (51%)
 Frame = -3

Query: 293 PCVTLVLDCLLRPLPVSVDDELRHAALRIMLSMSGRFRPPQ 171
           PC+T VLD  LR  P + +  L   +LR    +   FR PQ
Sbjct: 495 PCLTAVLDLQLRSAPAASERPLWDTSLRAPSCLEA-FRDPQ 534


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,575,355
Number of Sequences: 219361
Number of extensions: 513130
Number of successful extensions: 2034
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2033
length of database: 80,573,946
effective HSP length: 75
effective length of database: 64,121,871
effective search space used: 1538924904
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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