Clone Information

BLAST Search Result

Clone Name	baet76e06
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline...	35	0.068
2	SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu...	27	0.51
3	SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu...	27	0.51
4	NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)	32	0.58
5	RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding sub...	32	0.76
6	TOM40_HUMAN (O96008) Probable mitochondrial import receptor subu...	32	0.76
7	DS_DROME (Q24292) Protein dachsous precursor (Adherin)	32	0.76
8	PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B cat...	31	0.99
9	ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	31	1.3
10	PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose i...	30	1.7
11	CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel al...	30	1.7
12	RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein	30	1.7
13	BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-assoc...	30	1.7
14	PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein...	30	1.7
15	ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 prot...	30	1.7
16	PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contain...	30	2.2
17	CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interacto...	30	2.2
18	FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)	30	2.2
19	WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-W...	30	2.2
20	TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subuni...	30	2.2
21	BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1...	30	2.9
22	TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA ...	30	2.9
23	UBQL1_HUMAN (Q9UMX0) Ubiquilin-1 (Protein linking IAP with cytos...	30	2.9
24	FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)	30	2.9
25	ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phyt...	29	3.7
26	HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated...	29	3.7
27	OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-b...	29	3.7
28	HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)	29	3.7
29	PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior...	29	3.7
30	CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding...	29	3.7
31	PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catal...	29	3.7
32	PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B cat...	29	3.7
33	NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleopor...	29	4.9
34	WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1	29	4.9
35	IE18_PRVIF (P11675) Immediate-early protein IE180	29	4.9
36	ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disint...	29	4.9
37	TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA ...	29	4.9
38	YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5	29	4.9
39	BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl...	29	4.9
40	WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family mem...	28	6.4
41	LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis f...	28	6.4
42	IF2_STRAW (Q82K53) Translation initiation factor IF-2	28	6.4
43	BUB1_SCHPO (O94751) Checkpoint serine/threonine-protein kinase b...	28	6.4
44	TAF4_HUMAN (O00268) Transcription initiation factor TFIID subuni...	28	6.4
45	BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-Co...	28	6.4
46	EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril int...	28	6.4
47	ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenyl...	28	6.4
48	SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (P...	28	6.4
49	HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated...	28	6.4
50	YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis assoc...	28	6.4
51	RS13_THEVO (Q97B96) 30S ribosomal protein S13P	28	6.4
52	ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 ...	28	6.4
53	ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulen...	28	6.4
54	TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.2...	28	8.3
55	FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1...	28	8.3
56	SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor	28	8.3
57	OPA1_MOUSE (P58281) Dynamin-like 120 kDa protein, mitochondrial ...	28	8.3
58	CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-...	28	8.3
59	CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (E...	28	8.3
60	5E5_RAT (Q63003) 5E5 antigen	28	8.3
61	PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presyna...	28	8.3
62	CCNL1_CHICK (Q5ZJP9) Cyclin-L1	28	8.3
63	SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glu...	28	8.3
64	CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5...	28	8.3
65	RCOR2_RAT (Q5FWT8) REST corepressor 2	28	8.3
66	RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)	28	8.3
67	RCOR2_HUMAN (Q8IZ40) REST corepressor 2	28	8.3

>ENAH_MOUSE (Q03173) Protein enabled homolog (NPC-derived proline-rich protein|
           1) (NDPP-1)
          Length = 802

 Score = 35.0 bits (79), Expect = 0.068
 Identities = 19/45 (42%), Positives = 22/45 (48%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 262
           PP S P A PP   P     PP  P      LA ++ CGS+AS P
Sbjct: 434 PPTSGPAAPPPPPPPPPPPPPPPLPPPPLPPLASLSHCGSQASPP 478

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>SYQ_XYLFT (Q87DU6) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.6 bits (57), Expect(2) = 0.51
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 225 VTHSLADFDFHDHRP 181
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245



 Score = 24.3 bits (51), Expect(2) = 0.51
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 82  LPKMAHLEHPIPWHGSPKQPSHP 14
           LP  +HL  P+   G P++PS P
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278

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>SYQ_XYLFA (Q9PDP1) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 580

 Score = 26.6 bits (57), Expect(2) = 0.51
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = -2

Query: 225 VTHSLADFDFHDHRP 181
           +THSL   +F DHRP
Sbjct: 231 ITHSLCTLEFEDHRP 245



 Score = 24.3 bits (51), Expect(2) = 0.51
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 82  LPKMAHLEHPIPWHGSPKQPSHP 14
           LP  +HL  P+   G P++PS P
Sbjct: 256 LPNNSHLLKPLLDKGFPQEPSQP 278

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>NPHP4_HUMAN (O75161) Nephrocystin-4 (Nephroretinin)|
          Length = 1426

 Score = 32.0 bits (71), Expect = 0.58
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = -2

Query: 396 PPRSAPTA--APPGLAPRVLQRPPRPPTHRGMALAQMA 289
           P R  PT+  +PP   PRVL  P   P   G++++Q+A
Sbjct: 471 PSRKPPTSPSSPPAPVPRVLAAPQNSPVGPGLSISQLA 508

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>RFA1_XENTR (Q5FW17) Replication protein A 70 kDa DNA-binding subunit (RP-A)|
           (RF-A) (Replication factor-A protein 1) (p70)
          Length = 609

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 16/45 (35%), Positives = 24/45 (53%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAP 262
           P   AP +APP   P+ +  PP P  +RG   +++ G GS  + P
Sbjct: 127 PAAPAPASAPPPSKPQNISAPPPPSMNRG--ASKLFGGGSVVNTP 169

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>TOM40_HUMAN (O96008) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (Haymaker protein) (p38.5)
          Length = 361

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = -2

Query: 402 VLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 286
           VL   S P   PP  AP ++  PP PP+  G  L  + G
Sbjct: 4   VLAASSPPAGPPPPPAPALVGLPPPPPSPPGFTLPPLGG 42

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>DS_DROME (Q24292) Protein dachsous precursor (Adherin)|
          Length = 3503

 Score = 31.6 bits (70), Expect = 0.76
 Identities = 20/46 (43%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
 Frame = -2

Query: 411  GVVVL--PPRSAPTAAPPGL----APRVLQRPPRPPTHRGMALAQM 292
            G VVL  PP + PT  PP L    APR +  P R P H  +A A +
Sbjct: 3386 GSVVLKPPPSAPPTHIPPPLLTNVAPRAINLPMRLPPHLSLAPAHL 3431

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>PP2BB_HUMAN (P16298) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 524

 Score = 31.2 bits (69), Expect = 0.99
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPPTHR 313
           PP   P   PPG A RV++  P PPTHR
Sbjct: 11  PPPPPPPPPPPG-ADRVVKAVPFPPTHR 37

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>ATX2_HUMAN (Q99700) Ataxin-2 (Spinocerebellar ataxia type 2 protein)|
           (Trinucleotide repeat-containing gene 13 protein)
          Length = 1312

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTH 316
           LPPR+A    PP   P    RP RPP+H
Sbjct: 573 LPPRAATPTRPPSRPP---SRPSRPPSH 597

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>PGMI_AERPE (Q9YE01) Bifunctional phosphoglucose/phosphomannose isomerase|
           (Glucose-6-phosphate isomerase) (EC 5.3.1.9) (GPI)
           (Phosphoglucose isomerase) (PGI) (Mannose-6-phosphate
           isomerase) (EC 5.3.1.8) (Phosphomannose isomerase) (PMI)
          Length = 335

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/46 (45%), Positives = 25/46 (54%), Gaps = 11/46 (23%)
 Frame = -2

Query: 372 APPGLAPRVLQ--RPPRPPTHR--GMALAQMAG-------CGSRAS 268
           AP G   RV++  RPPRPP HR  G+ LA  +G       CGS  S
Sbjct: 57  APQGPEFRVVKDFRPPRPPRHRGYGLVLASYSGNTLETVECGSLLS 102

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>CAC1H_HUMAN (O95180) Voltage-dependent T-type calcium channel alpha-1H subunit|
           (Voltage-gated calcium channel alpha subunit Cav3.2)
           (Low-voltage-activated calcium channel alpha1 3.2
           subunit)
          Length = 2353

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 19/41 (46%), Positives = 21/41 (51%)
 Frame = -3

Query: 401 YYHQDLHRRPLRPGSRPGFCSGRRALLLIGAWRSPRWPGVG 279
           +YH   H  P RPG  PG C  R  L+  GA  SP  PG G
Sbjct: 528 HYHFS-HGSPRRPGPEPGACDTR--LVRAGAPPSPPSPGRG 565

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>RP1L1_HUMAN (Q8IWN7) Retinitis pigmentosa 1-like 1 protein|
          Length = 2480

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 23/80 (28%), Positives = 31/80 (38%)
 Frame = +2

Query: 158 GCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWASAMPR*VGGRGG 337
           G W   TAGR      SA    +T LP    P+      R P   + +++    +G    
Sbjct: 436 GLWGHGTAGRERCSQDSASPASSTGLPEGSEPE-SSCCPRTPEDGVDSASPSAQIGAERK 494

Query: 338 RCKTRGASPGGAAVGADLGG 397
              + G  PG    GA LGG
Sbjct: 495 AGGSLGEDPGLCIDGAGLGG 514

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>BAT2_HUMAN (P48634) Large proline-rich protein BAT2 (HLA-B-associated|
           transcript 2)
          Length = 2157

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPP 322
           PP +  T APP   P+ L  PP PP
Sbjct: 511 PPAAPSTPAPPPAVPKELPAPPAPP 535

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>PDC6I_MOUSE (Q9WU78) Programmed cell death 6-interacting protein|
           (ALG-2-interacting protein X) (ALG-2-interacting protein
           1) (E2F1-inducible protein) (Eig2)
          Length = 869

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 5/55 (9%)
 Frame = -2

Query: 411 GVVVLPPRSAPTAAPPGLAPRVLQRPPRP--PTHR---GMALAQMAGCGSRASAP 262
           G    PP  AP   PP   P+   RPP P  P +R     A A  AG G+ ++AP
Sbjct: 734 GHAAAPPTPAPRTMPPA-KPQPPARPPPPVLPANRVPPASAAAAPAGVGTASAAP 787

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>ATX2_MOUSE (O70305) Ataxin-2 (Spinocerebellar ataxia type 2 protein homolog)|
          Length = 1285

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 14/28 (50%), Positives = 16/28 (57%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTH 316
           LPPR+A    PP   P    RP RPP+H
Sbjct: 543 LPPRAATHTRPPSRPP---SRPSRPPSH 567

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>PLMN_BOVIN (P06868) Plasminogen precursor (EC 3.4.21.7) [Contains: Plasmin|
           heavy chain A; Activation peptide; Plasmin heavy chain
           A, short form; Plasmin light chain B]
          Length = 812

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 18/55 (32%), Positives = 22/55 (40%)
 Frame = +2

Query: 107 PEAGLRCPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTTHLPNQLAPKMDGAE 271
           P AGL     R P   K  W   T  R  W+  + K+C  T      AP+  G E
Sbjct: 424 PNAGLTMNYCRNPDADKSPWCYTTDPRVRWEFCNLKKCSETPEQVPAAPQAPGVE 478

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>CABL1_MOUSE (Q9ESJ1) CDK5 and ABL1 enzyme substrate 1 (Interactor with CDK3 1)|
           (Ik3-1)
          Length = 568

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = -2

Query: 387 SAPTAAPPGLAPRVLQRPPRPP 322
           S+P   PP L PRVL  P +PP
Sbjct: 123 SSPCPLPPSLVPRVLGEPSQPP 144

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>FRIZ2_DROME (Q9VVX3) Protein frizzled-2 precursor (dFz2)|
          Length = 694

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 22/90 (24%), Positives = 33/90 (36%), Gaps = 1/90 (1%)
 Frame = +2

Query: 146 RTHKGCWSIKTAGRWSWKSKSAKECVTTHL-PNQLAPKMDGAEARDPHPAIWASAMPR*V 322
           R   GC  I     + W  + A E +  H  P+ L  +           +   S      
Sbjct: 142 RARSGCAPIMQQYSFEWPERMACEHLPLHGDPDNLCMEQPSYTEAGSGGSSGGSGGSGSG 201

Query: 323 GGRGGRCKTRGASPGGAAVGADLGGSTTTP 412
            G GG+ K  G+  GG+  G   G ++T P
Sbjct: 202 SGSGGKRKQGGSGSGGSGAGGSSGSTSTKP 231

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>WASL_HUMAN (O00401) Neural Wiskott-Aldrich syndrome protein (N-WASP)|
          Length = 505

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 22/55 (40%), Positives = 24/55 (43%), Gaps = 6/55 (10%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAP-RVLQRPPRPPTHR-----GMALAQMAGCGSRASAPSIFG 250
           PP  APTAAPP   P R     P PP +R       AL   A  G     PS+ G
Sbjct: 313 PPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPPALPSSAPSGPPPPPPSVLG 367

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>TOM40_RAT (Q75Q40) Probable mitochondrial import receptor subunit TOM40|
           homolog (Translocase of outer membrane 40 kDa subunit
           homolog) (38 kDa mitochondrial outer membrane protein)
           (OM38)
          Length = 361

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = -2

Query: 402 VLPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAG 286
           VL   S P   PP   P ++  PP PP+  G  L  + G
Sbjct: 4   VLAASSPPAGPPPPPTPSLVGLPPPPPSPPGFTLPPLGG 42

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>BMP2K_HUMAN (Q9NSY1) BMP-2-inducible protein kinase (EC 2.7.11.1) (BIKe)|
          Length = 1161

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 15/34 (44%), Positives = 17/34 (50%)
 Frame = +2

Query: 302 SAMPR*VGGRGGRCKTRGASPGGAAVGADLGGST 403
           S MP+  GG GG     GA   GA  G   GGS+
Sbjct: 5   SRMPKSEGGSGGGAAGGGAGGAGAGAGCGSGGSS 38

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>TCRG1_MOUSE (Q8CGF7) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150) (p144) (Formin-binding protein 28) (FBP 28)
          Length = 1100

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRG 310
           +PP   P   PP + P  LQRPP  P   G
Sbjct: 76  MPPMPPPGGIPPPMGPPHLQRPPFMPPPMG 105

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>UBQL1_HUMAN (Q9UMX0) Ubiquilin-1 (Protein linking IAP with cytoskeleton 1)|
           (PLIC-1) (hPLIC-1)
          Length = 589

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 18/48 (37%), Positives = 20/48 (41%)
 Frame = +2

Query: 269 EARDPHPAIWASAMPR*VGGRGGRCKTRGASPGGAAVGADLGGSTTTP 412
           E RDP P  WA    +      G   T G + G  A G   G STT P
Sbjct: 315 ENRDPLPNPWAPQTSQSSSASSGTASTVGGTTGSTASGTS-GQSTTAP 361

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>FZD8_MOUSE (Q61091) Frizzled 8 precursor (Frizzled-8) (Fz-8) (mFz8)|
          Length = 685

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 22/50 (44%), Positives = 23/50 (46%), Gaps = 5/50 (10%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAP---RVLQRPP--RPPTHRGMALAQMAGCGSRASAP 262
           PPR  P   PPG  P       RPP  RPP HRG       G G  A+AP
Sbjct: 163 PPRRLPPPPPPGEQPPSGSGHSRPPGARPP-HRG---GSSRGSGDAAAAP 208

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>ENL2_ARATH (Q9T076) Early nodulin-like protein 2 precursor (Phytocyanin-like|
           protein)
          Length = 349

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
 Frame = -2

Query: 399 LPPRSAPTAAPPG-LAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPS 259
           +PP SAP  +PPG +AP+        PT        +A  GS +S+PS
Sbjct: 249 IPPSSAPMTSPPGSMAPKSSSPVSNSPT----VSPSLAPGGSTSSSPS 292

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>HCN4_RABIT (Q9TV66) Potassium/sodium hyperpolarization-activated cyclic|
            nucleotide-gated channel 4 (Hyperpolarization-activated
            cation channel 4) (HAC-4)
          Length = 1175

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -2

Query: 411  GVVVLPPRSAPTAAPPGLAPRVLQRPPRPP 322
            G ++LPP S+P   PP  AP+    PP  P
Sbjct: 1031 GSLLLPPASSPPPPPPPPAPQRRATPPLAP 1060

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>OMB_DROME (Q24432) Optomotor-blind protein (Lethal(1)optomotor-blind)|
           (L(1)omb) (Protein bifid)
          Length = 972

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 9/45 (20%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQR---------PPRPPTHRGMALAQMAG 286
           P + PT  PP   P  LQ+         PP PP     ALA +AG
Sbjct: 212 PPAGPTGLPPPTPPHHLQQQQQQQQHPAPPPPPYFPAAALAALAG 256

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>HXD13_MOUSE (P70217) Homeobox protein Hox-D13 (Hox-4.8)|
          Length = 339

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 17/48 (35%), Positives = 21/48 (43%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIF 253
           P  S+ + A PG     L  P    TH G A A  A   + A+A S F
Sbjct: 23  PASSSSSVAAPGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAASTF 70

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>PSC_DROME (P35820) Polycomb group protein Psc (Protein posterior sex combs)|
          Length = 1601

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 20/45 (44%), Positives = 22/45 (48%), Gaps = 5/45 (11%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQ-----RPPRPPTHRGMALAQMAGCGSR 274
           P   P A PP LAPR LQ      PP  P H   A  QM+  G+R
Sbjct: 811 PLMPPPAKPPMLAPRKLQPSAQFAPPPSPIHH-HAGVQMSAPGNR 854

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>CENG1_HUMAN (Q99490) Centaurin-gamma 1 (ARF-GAP with GTP-binding protein-like,|
           ankyrin repeat and pleckstrin homology domains 2)
           (AGAP-2) (Phosphatidylinositol-3-kinase enhancer) (PIKE)
           (GTP-binding and GTPase activating protein 2) (GGAP2)
          Length = 1192

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 7/39 (17%)
 Frame = -2

Query: 405 VVLPPRSAPTAA-------PPGLAPRVLQRPPRPPTHRG 310
           + LPP  +P  A       PPG AP +   PP P   RG
Sbjct: 293 LTLPPTPSPATAVTAASAQPPGPAPPITLEPPAPGLKRG 331

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>PP2BB_RAT (P20651) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 525

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 313
           P R+AP   PP   P    RV++  P PPTHR
Sbjct: 6   PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37

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>PP2BB_MOUSE (P48453) Serine/threonine-protein phosphatase 2B catalytic subunit|
           beta isoform (EC 3.1.3.16) (Calmodulin-dependent
           calcineurin A subunit beta isoform) (CAM-PRP catalytic
           subunit)
          Length = 525

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 15/32 (46%), Positives = 18/32 (56%), Gaps = 4/32 (12%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAP----RVLQRPPRPPTHR 313
           P R+AP   PP   P    RV++  P PPTHR
Sbjct: 6   PARAAPPPPPPPPPPLGADRVVKAVPFPPTHR 37

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>NUP88_RAT (O08658) Nuclear pore complex protein Nup88 (Nucleoporin Nup88) (88|
           kDa nuclear pore complex protein) (Nucleoporin Nup84)
          Length = 742

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/40 (37%), Positives = 21/40 (52%)
 Frame = +1

Query: 190 VMEVEIR*GVCNNSPAESTSPENGWR*SARPTPGHLGERH 309
           V+ + +R G+ N SPAE+  P      S  P P HL  R+
Sbjct: 22  VVFLRLREGLKNQSPAEADKPATSTSPSCPPLPPHLPTRN 61

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>WSP1_SCHPO (O36027) Wiskott-Aldrich syndrome homolog protein 1|
          Length = 574

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 23/69 (33%), Positives = 26/69 (37%), Gaps = 17/69 (24%)
 Frame = -2

Query: 411 GVVVLPP--RSAPTAAPPGLAP------------RVLQRPPRPP---THRGMALAQMAGC 283
           G + LPP  RSAP   PP  AP            R +  PP PP     R        G 
Sbjct: 349 GSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408

Query: 282 GSRASAPSI 256
            SR S P +
Sbjct: 409 ASRTSTPPV 417

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>IE18_PRVIF (P11675) Immediate-early protein IE180|
          Length = 1461

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 33/112 (29%), Positives = 41/112 (36%), Gaps = 7/112 (6%)
 Frame = -2

Query: 396 PPRSAPTAAP-PGLAPRVLQRPPRP------PTHRGMALAQMAGCGSRASAPSIFGAS*F 238
           P R  P   P P   PR    P +P      P  RG A       G   SAP   GA   
Sbjct: 200 PARGDPVGEPGPAARPRTPAPPAQPAAVAAAPARRGPASPASPAAGP-VSAPGGGGAPSG 258

Query: 237 GR*VVTHSLADFDFHDHRPAVLIDQHPLWVLG*RAVGHRNPASGSSRIASSA 82
           G     H       H HR  +L +      L  R +G R+P S +   +SS+
Sbjct: 259 GGDRGRHH------HQHREPLLDEPAAARRLDPRPLGARSPVSSNPNSSSSS 304

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>ATS20_MOUSE (P59511) ADAMTS-20 precursor (EC 3.4.24.-) (A disintegrin and|
            metalloproteinase with thrombospondin motifs 20) (ADAM-TS
            20) (ADAM-TS20)
          Length = 1906

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/35 (42%), Positives = 17/35 (48%)
 Frame = +2

Query: 125  CPTAR*PRTHKGCWSIKTAGRWSWKSKSAKECVTT 229
            C     PRTHK C S +     SWK+   KEC  T
Sbjct: 1452 CSHLHKPRTHKACRSGRCP---SWKANKWKECSVT 1483

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>TCRG1_HUMAN (O14776) Transcription elongation regulator 1 (TATA box-binding|
           protein-associated factor 2S) (Transcription factor
           CA150)
          Length = 1098

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPP 322
           +PP   P   PP + P  LQRPP  P
Sbjct: 76  MPPMPPPGGIPPPMGPPHLQRPPFMP 101

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>YP85_CAEEL (Q09442) Putative RNA-binding protein C08B11.5|
          Length = 388

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 13/30 (43%), Positives = 15/30 (50%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPPTHRGM 307
           PP   P+A P    P    RPP PP+  GM
Sbjct: 351 PPPRYPSAGPGMYPPPPPSRPPAPPSGHGM 380

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>BCL6B_MOUSE (O88282) B-cell CLL/lymphoma 6 member B protein (Bcl6-associated|
           zinc finger protein)
          Length = 474

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 17/30 (56%), Positives = 19/30 (63%)
 Frame = -2

Query: 408 VVVLPPRSAPTAAPPGLAPRVLQRPPRPPT 319
           V V PPR  PT APPG +PR  +  P PPT
Sbjct: 145 VEVEPPRP-PTVAPPG-SPRRSEGHPDPPT 172

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>WASF4_HUMAN (Q8IV90) Wiskott-Aldrich syndrome protein family member 4|
           (WASP-family protein member 4)
          Length = 625

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRPP 322
           PP  +P ++ PG AP     PP PP
Sbjct: 432 PPLGSPPSSKPGFAPPPAPPPPPPP 456

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>LITAF_XENTR (Q6P828) Lipopolysaccharide-induced tumor necrosis factor-alpha|
           factor homolog (LPS-induced TNF-alpha factor homolog)
          Length = 148

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -2

Query: 375 AAPPGLAPRVLQRPPRPPTHRGMALAQMA 289
           +APP         PP PP H+GM    M+
Sbjct: 18  SAPPSYEEATFHHPPYPPLHQGMDAKNMS 46

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>IF2_STRAW (Q82K53) Translation initiation factor IF-2|
          Length = 1046

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQRP--PRPPTHRGMALAQMAGCGSRASAPSIFG 250
           PR A  A P   +P    RP  PRPP  +  A  + A     A+AP+  G
Sbjct: 60  PRKAAPAKPGAPSPAQAARPAAPRPPAPKPAAAERPAAAERPAAAPAAPG 109

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>BUB1_SCHPO (O94751) Checkpoint serine/threonine-protein kinase bub1 (EC|
           2.7.11.1)
          Length = 1044

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/29 (41%), Positives = 16/29 (55%)
 Frame = -2

Query: 378 TAAPPGLAPRVLQRPPRPPTHRGMALAQM 292
           T  P  L+P+  Q+PP P  H   ALA +
Sbjct: 365 TVMPVALSPKPAQKPPSPTIHTKAALADI 393

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>TAF4_HUMAN (O00268) Transcription initiation factor TFIID subunit 4|
           (Transcription initiation factor TFIID 135 kDa subunit)
           (TAF(II)135) (TAFII-135) (TAFII135) (TAFII-130)
           (TAFII130)
          Length = 1085

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 23/56 (41%), Positives = 25/56 (44%), Gaps = 10/56 (17%)
 Frame = -2

Query: 396 PPRSAPTAAPPGL--APRVLQRPP----RPPTHRGM----ALAQMAGCGSRASAPS 259
           P  +AP AAPP    AP  L RPP     PPT        A AQ  G    A AP+
Sbjct: 261 PAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA 316

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>BCCP_ARATH (Q42533) Biotin carboxyl carrier protein of acetyl-CoA carboxylase,|
           chloroplast precursor (BCCP)
          Length = 280

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 4/50 (8%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMAL----AQMAGCGSRASAP 262
           + P +AP AA P  +      PP PPT    +L    + MAG   R+ AP
Sbjct: 171 MAPPAAPAAAAPAPSTPASLPPPSPPTPAKSSLPTVKSPMAGTFYRSPAP 220

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>EMIL2_HUMAN (Q9BXX0) EMILIN-2 precursor (Elastin microfibril interface-located|
           protein 2) (Elastin microfibril interfacer 2) (Protein
           FOAP-10)
          Length = 1053

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPR-VLQRPPRPPTHRGMALAQMAG 286
           P   AP+  PP  AP+  LQ  P PP   G A A+  G
Sbjct: 784 PSAKAPSPPPPAEAPKEPLQPEPAPPRPSGPATAEDPG 821

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>ADCY5_RAT (Q04400) Adenylate cyclase type 5 (EC 4.6.1.1) (Adenylate cyclase|
           type V) (ATP pyrophosphate-lyase 5) (Adenylyl cyclase 5)
          Length = 1262

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +2

Query: 323 GGRGGRCKTRGASPGGAAVGADLGGS 400
           GGRG R + RGA+ GG+      GGS
Sbjct: 112 GGRGSRRQRRGAAGGGSTRAPPAGGS 137

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>SAYP_DROME (Q9VWF2) Supporter of activation of yellow protein (Protein enhancer|
            of yellow 3)
          Length = 2006

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
 Frame = +2

Query: 98   RDEPEAGLRCPTAR*PRTHKGCWSI--KTAGR---WSWKSKSAKECV 223
            RD PEA +RC T R  R H  C  +  +  GR   ++W+    K C+
Sbjct: 1707 RDMPEAFIRCYTCR-KRVHPSCVDMPPRMVGRVRNYNWQCAGCKCCI 1752

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>HCN2_HUMAN (Q9UL51) Potassium/sodium hyperpolarization-activated cyclic|
           nucleotide-gated channel 2 (Brain cyclic nucleotide
           gated channel 2) (BCNG-2)
          Length = 889

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 18/49 (36%), Positives = 21/49 (42%), Gaps = 10/49 (20%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPR----PPT------HRGMALAQMAGCG 280
           PP   P A PPG  P   Q PPR    PP        RG   ++ + CG
Sbjct: 35  PPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGGPRGRLRSRDSSCG 83

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>YTHD1_HUMAN (Q9BYJ9) YTH domain protein 1 (Dermatomyositis associated with|
           cancer putative autoantigen 1) (DACA-1)
          Length = 559

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 7/45 (15%)
 Frame = -2

Query: 375 AAPPGLAPRVLQRPPRP-------PTHRGMALAQMAGCGSRASAP 262
           A PP LA    Q P +P       P +R  A  Q  G GS +++P
Sbjct: 307 AQPPALAQPQYQSPQQPPQTRWVAPRNRNAAFGQSGGAGSDSNSP 351

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>RS13_THEVO (Q97B96) 30S ribosomal protein S13P|
          Length = 171

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = +3

Query: 99  GMNRKPGYGAQLRANLEPTKGVGRLRQQD 185
           G+  + GY    R NL+PTK +G L++ +
Sbjct: 54  GIGLRLGYAIAERLNLQPTKKIGELKEDE 82

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>ABL1_HUMAN (P00519) Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2)|
           (p150) (c-ABL) (Abelson murine leukemia viral oncogene
           homolog 1)
          Length = 1130

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = -2

Query: 387 SAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPS 259
           S+P ++PP L P+ L+R        G+   + AG GS    P+
Sbjct: 804 SSPGSSPPNLTPKPLRRQVTVAPASGLPHKEEAGKGSALGTPA 846

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>ICP34_HHV11 (P36313) Infected cell protein ICP34.5 (Neurovirulence factor|
           ICP34.5)
          Length = 248

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 14/24 (58%), Positives = 14/24 (58%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRP 325
           PP SAP A P   APR   RPP P
Sbjct: 87  PPESAPEARPTAAAPR--PRPPPP 108

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>TMPSD_MOUSE (Q5U405) Transmembrane protease, serine 13 (EC 3.4.21.-) (Mosaic|
           serine protease) (Membrane-type mosaic serine protease)
          Length = 543

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/47 (31%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPR-PPTHRGMALAQMAGCGSRASAPS 259
           PP+++P  APP  A      P R PP+      +  A   S  S+P+
Sbjct: 47  PPQASPARAPPPQASPARASPARAPPSRSSSGRSSSARSASTTSSPT 93

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>FIP1_BRARE (Q5XJD3) Pre-mRNA 3'-end-processing factor FIP1 (FIP1-like 1)|
          Length = 570

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 15/29 (51%), Positives = 15/29 (51%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTHR 313
           LPP   P   PP L P V Q PP  P HR
Sbjct: 338 LPPNIPP---PPFLPPPVSQAPPLIPPHR 363

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>SDK1_HUMAN (Q7Z5N4) Protein sidekick-1 precursor|
          Length = 2213

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/47 (40%), Positives = 20/47 (42%), Gaps = 3/47 (6%)
 Frame = -2

Query: 396 PPRSAPTAAPPGLAPRVLQRPPRP---PTHRGMALAQMAGCGSRASA 265
           P  S P  A P LAPR    P RP   P   G   A    CG R +A
Sbjct: 28  PRGSPPGRARPSLAPRPGPEPSRPRAAPETPGGDTAGAGRCGGRRAA 74

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>OPA1_MOUSE (P58281) Dynamin-like 120 kDa protein, mitochondrial precursor|
           (Large GTP-binding protein) (LargeG)
          Length = 960

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 1/41 (2%)
 Frame = +2

Query: 185 RWS-WKSKSAKECVTTHLPNQLAPKMDGAEARDPHPAIWAS 304
           RW  WK+++ ++CV     N+L   +   +  D HPA  AS
Sbjct: 774 RWMYWKNRTQEQCVHNETKNELEKML---KVNDEHPAYLAS 811

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>CHCH2_MOUSE (Q9D1L0) Coiled-coil-helix-coiled-coil-helix domain-containing|
           protein 2
          Length = 153

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/49 (36%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = -2

Query: 393 PRSAPTAAPP-GLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFG 250
           PR AP A PP   AP  +  P   P   G+ +AQMA   +  +  S  G
Sbjct: 26  PRRAPAAQPPAAAAPSAVGSPAAAPRQPGL-MAQMATTAAGVAVGSAVG 73

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>CYSH_NEIMA (Q9JUD5) Phosphoadenosine phosphosulfate reductase (EC 1.8.4.8)|
           (PAPS reductase, thioredoxin dependent) (PAdoPS
           reductase) (3'-phosphoadenylylsulfate reductase) (PAPS
           sulfotransferase)
          Length = 244

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 9/14 (64%), Positives = 12/14 (85%)
 Frame = +2

Query: 179 AGRWSWKSKSAKEC 220
           AGRW W+ K++KEC
Sbjct: 227 AGRWWWEDKNSKEC 240

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>5E5_RAT (Q63003) 5E5 antigen|
          Length = 825

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/53 (35%), Positives = 22/53 (41%)
 Frame = +2

Query: 239 NQLAPKMDGAEARDPHPAIWASAMPR*VGGRGGRCKTRGASPGGAAVGADLGG 397
           +Q  P + GA     H           +GGRG R   RG   GG A GA  GG
Sbjct: 535 SQTLPALAGAPTAHAHAVPGPGPAAATLGGRGRRGSWRGGRRGGGA-GASGGG 586

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>PCLO_RAT (Q9JKS6) Protein piccolo (Aczonin) (Multidomain presynaptic|
            cytomatrix protein)
          Length = 5085

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/36 (38%), Positives = 18/36 (50%)
 Frame = -2

Query: 396  PPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMA 289
            PP S  T++PP   P      P+PPT+    LA  A
Sbjct: 2358 PPPSPSTSSPPPTPPLPPATSPKPPTYPKKKLAVAA 2393

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>CCNL1_CHICK (Q5ZJP9) Cyclin-L1|
          Length = 534

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/37 (45%), Positives = 20/37 (54%)
 Frame = +1

Query: 19  GSAASVSRATESGAPSGPFLVSRTGDAG*TGSRVTVP 129
           GSAA+V+ A   G P+GP     T  A  TGS   VP
Sbjct: 6   GSAAAVA-AVAGGGPAGPHAAGVTAGAVTTGSGAPVP 41

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>SYQ_CHRVO (Q7NX86) Glutaminyl-tRNA synthetase (EC 6.1.1.18) (Glutamine--tRNA|
           ligase) (GlnRS)
          Length = 560

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 7/30 (23%)
 Frame = -2

Query: 225 VTHSLADFDFHDHRPA-------VLIDQHP 157
           +THSL   +F DHRP        + I+ HP
Sbjct: 227 ITHSLCSLEFEDHRPLYDWVLDNISIEHHP 256

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>CD2L5_MOUSE (Q69ZA1) Cell division cycle 2-like protein kinase 5 (EC 2.7.11.22)|
           (CDC2-related protein kinase 5)
          Length = 1511

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 399 LPPRSAPTAAPPGLAPRVLQRPPRPPTHRGMALAQMAGCGSRASAPSIFGAS 244
           L P+  P   P  L P++LQ PP PP      L  +A  G+ A+A ++  AS
Sbjct: 32  LSPQQPPLLLPL-LQPQLLQPPPPPP-----PLLFLAAPGAAAAAAAVAAAS 77

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>RCOR2_RAT (Q5FWT8) REST corepressor 2|
          Length = 523

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQRPP---RPP 322
           PRS P A PP   P  L +PP   RPP
Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456

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>RCOR2_MOUSE (Q8C796) REST corepressor 2 (M-CoREST)|
          Length = 523

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQRPP---RPP 322
           PRS P A PP   P  L +PP   RPP
Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456

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>RCOR2_HUMAN (Q8IZ40) REST corepressor 2|
          Length = 523

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 14/27 (51%), Positives = 15/27 (55%), Gaps = 3/27 (11%)
 Frame = -2

Query: 393 PRSAPTAAPPGLAPRVLQRPP---RPP 322
           PRS P A PP   P  L +PP   RPP
Sbjct: 430 PRSVPPAPPPPPPPTSLSQPPPLLRPP 456


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,666,711
Number of Sequences: 219361
Number of extensions: 1520086
Number of successful extensions: 7101
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 5698
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7026
length of database: 80,573,946
effective HSP length: 100
effective length of database: 58,637,846
effective search space used: 2169600302
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result